Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035075.01.T01 | XP_013442682.1 | 94.553 | 514 | 13 | 1 | 1 | 499 | 1 | 514 | 0 | 1003 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035075.01.T01 | Q9LV33 | 76.892 | 489 | 97 | 2 | 25 | 497 | 21 | 509 | 0 | 784 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035075.01.T01 | A0A072TH37 | 94.553 | 514 | 13 | 1 | 1 | 499 | 1 | 514 | 0.0 | 1003 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047989.01 | MsG0680035075.01 | 0.816724 | 4.771869e-52 | 3.407771e-49 |
MsG0080048773.01 | MsG0680035075.01 | 0.848190 | 7.179423e-60 | 1.306835e-56 |
MsG0180000292.01 | MsG0680035075.01 | 0.803981 | 2.688633e-49 | 1.370174e-46 |
MsG0180000639.01 | MsG0680035075.01 | 0.829029 | 6.470774e-55 | 6.542845e-52 |
MsG0180001091.01 | MsG0680035075.01 | 0.812981 | 3.225100e-51 | 2.080071e-48 |
MsG0180001105.01 | MsG0680035075.01 | 0.808802 | 2.589632e-50 | 1.494774e-47 |
MsG0180001610.01 | MsG0680035075.01 | 0.815837 | 7.533032e-52 | 5.250514e-49 |
MsG0180003268.01 | MsG0680035075.01 | 0.805685 | 1.184792e-49 | 6.308409e-47 |
MsG0180003622.01 | MsG0680035075.01 | 0.801963 | 7.026089e-49 | 3.400170e-46 |
MsG0180004246.01 | MsG0680035075.01 | 0.813985 | 1.939255e-51 | 1.285281e-48 |
MsG0180004277.01 | MsG0680035075.01 | 0.801687 | 8.004754e-49 | 3.846802e-46 |
MsG0180004672.01 | MsG0680035075.01 | 0.821794 | 3.339872e-53 | 2.744694e-50 |
MsG0180004988.01 | MsG0680035075.01 | 0.844662 | 6.581463e-59 | 1.070008e-55 |
MsG0180005039.01 | MsG0680035075.01 | 0.822535 | 2.249039e-53 | 1.887759e-50 |
MsG0180005051.01 | MsG0680035075.01 | 0.832159 | 1.108002e-55 | 1.228184e-52 |
MsG0180005803.01 | MsG0680035075.01 | 0.800846 | 1.190163e-48 | 5.599452e-46 |
MsG0180005806.01 | MsG0680035075.01 | 0.822892 | 1.857759e-53 | 1.575129e-50 |
MsG0180005918.01 | MsG0680035075.01 | -0.854602 | 1.103468e-61 | 2.477880e-58 |
MsG0280010899.01 | MsG0680035075.01 | 0.819336 | 1.225305e-52 | 9.401197e-50 |
MsG0280011273.01 | MsG0680035075.01 | 0.800243 | 1.579484e-48 | 7.318030e-46 |
MsG0380012524.01 | MsG0680035075.01 | 0.814939 | 1.193333e-51 | 8.115774e-49 |
MsG0380013177.01 | MsG0680035075.01 | 0.819959 | 8.828991e-53 | 6.894069e-50 |
MsG0380013373.01 | MsG0680035075.01 | 0.830287 | 3.197344e-55 | 3.353879e-52 |
MsG0380014297.01 | MsG0680035075.01 | -0.812717 | 3.682968e-51 | 2.359008e-48 |
MsG0380014530.01 | MsG0680035075.01 | 0.807841 | 4.150441e-50 | 2.336073e-47 |
MsG0380014909.01 | MsG0680035075.01 | 0.810463 | 1.138594e-50 | 6.867615e-48 |
MsG0680030767.01 | MsG0680035075.01 | 0.831242 | 1.864823e-55 | 2.011755e-52 |
MsG0680033049.01 | MsG0680035075.01 | 0.806720 | 7.170938e-50 | 3.920466e-47 |
MsG0680034725.01 | MsG0680035075.01 | 0.831017 | 2.118559e-55 | 2.270474e-52 |
MsG0680035075.01 | MsG0680035269.01 | 0.986189 | 5.791160e-166 | 2.573196e-159 |
MsG0680035075.01 | MsG0780037395.01 | 0.803938 | 2.745540e-49 | 1.397628e-46 |
MsG0680035075.01 | MsG0780037808.01 | 0.821550 | 3.803399e-53 | 3.104039e-50 |
MsG0680035075.01 | MsG0780037910.01 | 0.864173 | 1.470561e-64 | 4.574179e-61 |
MsG0680035075.01 | MsG0780037953.01 | 0.824631 | 7.270990e-54 | 6.476982e-51 |
MsG0680035075.01 | MsG0780038334.01 | 0.866113 | 3.615492e-65 | 1.204663e-61 |
MsG0680035075.01 | MsG0780038341.01 | 0.825188 | 5.370778e-54 | 4.861004e-51 |
MsG0680035075.01 | MsG0780038784.01 | 0.812635 | 3.838421e-51 | 2.453295e-48 |
MsG0680035075.01 | MsG0780039179.01 | 0.818879 | 1.556734e-52 | 1.179600e-49 |
MsG0680035075.01 | MsG0780039186.01 | 0.814125 | 1.806834e-51 | 1.202103e-48 |
MsG0680035075.01 | MsG0780039339.01 | 0.827589 | 1.438860e-54 | 1.395059e-51 |
MsG0680035075.01 | MsG0780040388.01 | 0.804952 | 1.687285e-49 | 8.816428e-47 |
MsG0680035075.01 | MsG0780040700.01 | 0.813903 | 2.021775e-51 | 1.337068e-48 |
MsG0680035075.01 | MsG0780041074.01 | 0.809933 | 1.481109e-50 | 8.810801e-48 |
MsG0680035075.01 | MsG0780041091.01 | 0.817216 | 3.699123e-52 | 2.677578e-49 |
MsG0680035075.01 | MsG0780041424.01 | 0.852913 | 3.378357e-61 | 7.170196e-58 |
MsG0680035075.01 | MsG0880041991.01 | 0.827328 | 1.662739e-54 | 1.600239e-51 |
MsG0680035075.01 | MsG0880042026.01 | 0.804973 | 1.670704e-49 | 8.734128e-47 |
MsG0680035075.01 | MsG0880042645.01 | 0.804420 | 2.178705e-49 | 1.122790e-46 |
MsG0680035075.01 | MsG0880043965.01 | 0.815652 | 8.282548e-52 | 5.744432e-49 |
MsG0680035075.01 | MsG0880045668.01 | 0.823880 | 1.091336e-53 | 9.515579e-51 |
MsG0680035075.01 | MsG0880046054.01 | 0.805099 | 1.572126e-49 | 8.245173e-47 |
MsG0680035075.01 | MsG0880047394.01 | 0.818171 | 2.253230e-52 | 1.674215e-49 |
MsG0680035075.01 | MsG0880047656.01 | 0.801553 | 8.527178e-49 | 4.084073e-46 |
MsG0680035075.01 | MsG0880047657.01 | 0.846926 | 1.597862e-59 | 2.793662e-56 |
MsG0680035075.01 | MsG0880047740.01 | 0.815923 | 7.208823e-52 | 5.036355e-49 |
MsG0680035075.01 | MsG0880047760.01 | 0.801075 | 1.068534e-48 | 5.056607e-46 |
MsG0680035075.01 | MsG0880047770.01 | 0.805129 | 1.549212e-49 | 8.131546e-47 |
MsG0480018910.01 | MsG0680035075.01 | 0.837544 | 4.882921e-57 | 6.363376e-54 |
MsG0480021060.01 | MsG0680035075.01 | 0.802464 | 5.540545e-49 | 2.715883e-46 |
MsG0480021248.01 | MsG0680035075.01 | 0.807376 | 5.209629e-50 | 2.897000e-47 |
MsG0480021406.01 | MsG0680035075.01 | 0.813122 | 3.002316e-51 | 1.943712e-48 |
MsG0480023553.01 | MsG0680035075.01 | 0.800988 | 1.112914e-48 | 5.255356e-46 |
MsG0480023845.01 | MsG0680035075.01 | 0.803733 | 3.028350e-49 | 1.533409e-46 |
MsG0480023890.01 | MsG0680035075.01 | 0.807437 | 5.058086e-50 | 2.817142e-47 |
MsG0580024404.01 | MsG0680035075.01 | 0.801307 | 9.578559e-49 | 4.559289e-46 |
MsG0580025055.01 | MsG0680035075.01 | 0.807475 | 4.963125e-50 | 2.767102e-47 |
MsG0580025561.01 | MsG0680035075.01 | -0.806304 | 8.777177e-50 | 4.747783e-47 |
MsG0580025626.01 | MsG0680035075.01 | 0.802360 | 5.820249e-49 | 2.845560e-46 |
MsG0580025845.01 | MsG0680035075.01 | 0.814160 | 1.774836e-51 | 1.181932e-48 |
MsG0580025859.01 | MsG0680035075.01 | 0.804269 | 2.342523e-49 | 1.202544e-46 |
MsG0380015486.01 | MsG0680035075.01 | 0.836147 | 1.109441e-56 | 1.386003e-53 |
MsG0380015896.01 | MsG0680035075.01 | 0.811422 | 7.058603e-51 | 4.367511e-48 |
MsG0380016036.01 | MsG0680035075.01 | 0.824388 | 8.294822e-54 | 7.336206e-51 |
MsG0380016152.01 | MsG0680035075.01 | 0.804669 | 1.933736e-49 | 1.002994e-46 |
MsG0380016188.01 | MsG0680035075.01 | -0.808749 | 2.657950e-50 | 1.532100e-47 |
MsG0380016764.01 | MsG0680035075.01 | 0.808687 | 2.740719e-50 | 1.577208e-47 |
MsG0380016864.01 | MsG0680035075.01 | 0.805445 | 1.330127e-49 | 7.038372e-47 |
MsG0380017423.01 | MsG0680035075.01 | 0.813872 | 2.054237e-51 | 1.357383e-48 |
MsG0480018323.01 | MsG0680035075.01 | 0.801206 | 1.004434e-48 | 4.768777e-46 |
MsG0580026159.01 | MsG0680035075.01 | -0.822394 | 2.425338e-53 | 2.027627e-50 |
MsG0580026271.01 | MsG0680035075.01 | 0.839563 | 1.470694e-57 | 2.038594e-54 |
MsG0580029353.01 | MsG0680035075.01 | 0.805966 | 1.034187e-49 | 5.546248e-47 |
MsG0580029529.01 | MsG0680035075.01 | 0.818926 | 1.518585e-52 | 1.152292e-49 |
MsG0580029918.01 | MsG0680035075.01 | 0.806186 | 9.293831e-50 | 5.012389e-47 |
MsG0580030088.01 | MsG0680035075.01 | 0.810152 | 1.328611e-50 | 7.948717e-48 |
MsG0680030599.01 | MsG0680035075.01 | 0.833282 | 5.832181e-56 | 6.685141e-53 |
MsG0280006587.01 | MsG0680035075.01 | 0.826085 | 3.292197e-54 | 3.056485e-51 |
MsG0280006938.01 | MsG0680035075.01 | -0.801685 | 8.014285e-49 | 3.851100e-46 |
MsG0280006996.01 | MsG0680035075.01 | 0.840734 | 7.273794e-58 | 1.045671e-54 |
MsG0280007976.01 | MsG0680035075.01 | 0.831667 | 1.465630e-55 | 1.601365e-52 |
MsG0280008709.01 | MsG0680035075.01 | 0.822320 | 2.522690e-53 | 2.104481e-50 |
MsG0280009169.01 | MsG0680035075.01 | 0.812863 | 3.423204e-51 | 2.200842e-48 |
MsG0280009869.01 | MsG0680035075.01 | 0.831736 | 1.409544e-55 | 1.543364e-52 |
MsG0280009953.01 | MsG0680035075.01 | 0.809377 | 1.949898e-50 | 1.143022e-47 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0680035075.01 | MsG0480022231.01 | PPI |
MsG0680035075.01 | MsG0480018622.01 | PPI |
MsG0680035075.01 | MsG0180004865.01 | PPI |
MsG0680035075.01 | MsG0380012889.01 | PPI |
MsG0680035075.01 | MsG0380012550.01 | PPI |
MsG0680035269.01 | MsG0680035075.01 | PPI |
MsG0280007216.01 | MsG0680035075.01 | PPI |
MsG0680035075.01 | MsG0280007213.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035075.01.T01 | MTR_0110s0040 | 94.553 | 514 | 13 | 1 | 1 | 499 | 1 | 514 | 0.0 | 1003 |
MsG0680035075.01.T01 | MTR_0110s0030 | 91.829 | 514 | 27 | 1 | 1 | 499 | 1 | 514 | 0.0 | 982 |
MsG0680035075.01.T01 | MTR_0110s0040 | 97.600 | 375 | 9 | 0 | 1 | 375 | 1 | 375 | 0.0 | 768 |
MsG0680035075.01.T01 | MTR_0110s0020 | 92.446 | 278 | 21 | 0 | 1 | 278 | 1 | 278 | 0.0 | 542 |
MsG0680035075.01.T01 | MTR_4g083000 | 50.699 | 501 | 225 | 6 | 20 | 499 | 6 | 505 | 4.17e-178 | 510 |
MsG0680035075.01.T01 | MTR_4g081530 | 50.947 | 475 | 211 | 5 | 43 | 495 | 24 | 498 | 1.76e-167 | 483 |
MsG0680035075.01.T01 | MTR_5g044000 | 50.403 | 496 | 203 | 8 | 43 | 495 | 25 | 520 | 2.10e-167 | 483 |
MsG0680035075.01.T01 | MTR_6g078380 | 50.198 | 506 | 223 | 9 | 20 | 498 | 11 | 514 | 5.85e-167 | 482 |
MsG0680035075.01.T01 | MTR_6g078450 | 48.713 | 505 | 231 | 8 | 20 | 498 | 11 | 513 | 3.08e-166 | 480 |
MsG0680035075.01.T01 | MTR_4g066240 | 48.718 | 507 | 234 | 10 | 14 | 497 | 9 | 512 | 8.49e-165 | 476 |
MsG0680035075.01.T01 | MTR_3g033810 | 50.636 | 472 | 204 | 7 | 43 | 495 | 21 | 482 | 1.62e-164 | 475 |
MsG0680035075.01.T01 | MTR_3g026400 | 48.611 | 504 | 239 | 5 | 15 | 499 | 9 | 511 | 4.15e-164 | 474 |
MsG0680035075.01.T01 | MTR_6g078330 | 48.323 | 507 | 232 | 8 | 19 | 499 | 13 | 515 | 5.26e-164 | 474 |
MsG0680035075.01.T01 | MTR_4g066240 | 48.622 | 508 | 234 | 11 | 14 | 497 | 9 | 513 | 3.47e-163 | 472 |
MsG0680035075.01.T01 | MTR_2g098520 | 49.378 | 482 | 222 | 6 | 38 | 497 | 29 | 510 | 7.50e-163 | 471 |
MsG0680035075.01.T01 | MTR_3g033790 | 50.318 | 471 | 206 | 7 | 43 | 495 | 19 | 479 | 1.51e-162 | 469 |
MsG0680035075.01.T01 | MTR_4g066630 | 49.491 | 491 | 224 | 7 | 29 | 496 | 25 | 514 | 6.88e-162 | 469 |
MsG0680035075.01.T01 | MTR_4g066590 | 47.647 | 510 | 241 | 9 | 13 | 498 | 3 | 510 | 8.29e-161 | 466 |
MsG0680035075.01.T01 | MTR_2g098790 | 47.104 | 518 | 248 | 8 | 2 | 497 | 1 | 514 | 1.64e-160 | 465 |
MsG0680035075.01.T01 | MTR_3g026620 | 48.521 | 507 | 240 | 7 | 13 | 499 | 7 | 512 | 2.73e-160 | 465 |
MsG0680035075.01.T01 | MTR_2g098540 | 47.714 | 503 | 239 | 7 | 17 | 497 | 7 | 507 | 2.94e-160 | 464 |
MsG0680035075.01.T01 | MTR_4g066580 | 47.059 | 510 | 244 | 7 | 15 | 498 | 7 | 516 | 1.79e-159 | 463 |
MsG0680035075.01.T01 | MTR_4g066210 | 49.372 | 478 | 218 | 8 | 43 | 497 | 43 | 519 | 2.77e-156 | 455 |
MsG0680035075.01.T01 | MTR_3g028720 | 46.351 | 507 | 249 | 7 | 15 | 498 | 9 | 515 | 1.19e-154 | 451 |
MsG0680035075.01.T01 | MTR_3g026400 | 50.107 | 467 | 211 | 6 | 52 | 499 | 17 | 480 | 1.36e-154 | 449 |
MsG0680035075.01.T01 | MTR_4g131810 | 46.526 | 475 | 231 | 6 | 48 | 499 | 33 | 507 | 1.02e-153 | 448 |
MsG0680035075.01.T01 | MTR_4g066640 | 47.162 | 511 | 243 | 10 | 11 | 497 | 6 | 513 | 5.11e-153 | 446 |
MsG0680035075.01.T01 | MTR_3g026280 | 49.895 | 475 | 217 | 7 | 40 | 495 | 19 | 491 | 1.46e-151 | 442 |
MsG0680035075.01.T01 | MTR_2g079580 | 45.738 | 481 | 242 | 4 | 34 | 495 | 23 | 503 | 2.29e-151 | 442 |
MsG0680035075.01.T01 | MTR_2g022760 | 45.882 | 510 | 245 | 8 | 15 | 499 | 10 | 513 | 2.39e-151 | 442 |
MsG0680035075.01.T01 | MTR_2g079550 | 45.946 | 481 | 241 | 4 | 34 | 495 | 21 | 501 | 6.79e-151 | 441 |
MsG0680035075.01.T01 | MTR_5g071520 | 46.139 | 518 | 245 | 8 | 14 | 497 | 7 | 524 | 9.93e-151 | 441 |
MsG0680035075.01.T01 | MTR_4g023000 | 47.780 | 473 | 227 | 6 | 43 | 497 | 24 | 494 | 4.83e-149 | 435 |
MsG0680035075.01.T01 | MTR_2g022710 | 45.073 | 477 | 242 | 5 | 43 | 499 | 35 | 511 | 7.56e-149 | 436 |
MsG0680035075.01.T01 | MTR_4g083000 | 52.311 | 411 | 175 | 5 | 110 | 499 | 1 | 411 | 3.69e-148 | 430 |
MsG0680035075.01.T01 | MTR_2g098540 | 48.690 | 458 | 213 | 6 | 62 | 497 | 6 | 463 | 4.98e-148 | 432 |
MsG0680035075.01.T01 | MTR_4g066340 | 50.694 | 432 | 192 | 6 | 87 | 497 | 8 | 439 | 1.92e-146 | 427 |
MsG0680035075.01.T01 | MTR_4g066330 | 43.269 | 520 | 246 | 8 | 2 | 498 | 1 | 494 | 1.07e-145 | 427 |
MsG0680035075.01.T01 | MTR_4g131800 | 46.512 | 473 | 231 | 5 | 48 | 499 | 521 | 992 | 3.86e-145 | 442 |
MsG0680035075.01.T01 | MTR_6g078450 | 48.815 | 422 | 195 | 5 | 43 | 443 | 36 | 457 | 3.57e-140 | 411 |
MsG0680035075.01.T01 | MTR_4g016920 | 44.374 | 471 | 244 | 5 | 42 | 498 | 26 | 492 | 1.50e-139 | 412 |
MsG0680035075.01.T01 | MTR_4g066630 | 48.165 | 436 | 203 | 6 | 29 | 442 | 25 | 459 | 3.24e-138 | 407 |
MsG0680035075.01.T01 | MTR_4g066280 | 42.315 | 501 | 240 | 8 | 20 | 497 | 19 | 493 | 1.68e-136 | 403 |
MsG0680035075.01.T01 | MTR_6g078330 | 49.392 | 411 | 187 | 5 | 110 | 499 | 1 | 411 | 7.71e-136 | 399 |
MsG0680035075.01.T01 | MTR_5g068740 | 42.942 | 503 | 257 | 8 | 7 | 495 | 2 | 488 | 1.27e-134 | 399 |
MsG0680035075.01.T01 | MTR_1g088610 | 43.738 | 503 | 252 | 8 | 7 | 495 | 2 | 487 | 1.71e-134 | 403 |
MsG0680035075.01.T01 | MTR_1g088610 | 37.815 | 119 | 68 | 2 | 383 | 499 | 502 | 616 | 1.42e-17 | 86.3 |
MsG0680035075.01.T01 | MTR_4g066630 | 49.500 | 400 | 183 | 4 | 29 | 409 | 25 | 424 | 2.03e-133 | 394 |
MsG0680035075.01.T01 | MTR_7g068910 | 43.856 | 472 | 245 | 6 | 42 | 498 | 30 | 496 | 3.29e-133 | 396 |
MsG0680035075.01.T01 | MTR_4g066240 | 47.596 | 416 | 195 | 8 | 14 | 409 | 9 | 421 | 2.25e-131 | 388 |
MsG0680035075.01.T01 | MTR_4g015420 | 42.126 | 508 | 238 | 9 | 23 | 499 | 45 | 527 | 2.47e-131 | 391 |
MsG0680035075.01.T01 | MTR_3g028720 | 44.789 | 451 | 227 | 6 | 15 | 443 | 9 | 459 | 2.11e-130 | 387 |
MsG0680035075.01.T01 | MTR_3g026400 | 52.924 | 342 | 160 | 1 | 15 | 355 | 9 | 350 | 3.15e-130 | 383 |
MsG0680035075.01.T01 | MTR_7g068910 | 42.946 | 482 | 245 | 7 | 42 | 498 | 30 | 506 | 5.76e-130 | 388 |
MsG0680035075.01.T01 | MTR_4g066580 | 46.651 | 418 | 200 | 5 | 15 | 409 | 7 | 424 | 1.65e-129 | 383 |
MsG0680035075.01.T01 | MTR_2g022760 | 47.689 | 411 | 193 | 5 | 110 | 499 | 1 | 410 | 1.57e-128 | 380 |
MsG0680035075.01.T01 | MTR_4g067040 | 47.772 | 404 | 191 | 5 | 13 | 396 | 3 | 406 | 9.78e-128 | 378 |
MsG0680035075.01.T01 | MTR_4g067040 | 50.411 | 365 | 176 | 4 | 13 | 372 | 3 | 367 | 8.37e-126 | 372 |
MsG0680035075.01.T01 | MTR_6g078330 | 47.859 | 397 | 188 | 4 | 122 | 499 | 15 | 411 | 3.19e-125 | 372 |
MsG0680035075.01.T01 | MTR_2g043200 | 43.205 | 493 | 228 | 8 | 31 | 497 | 53 | 519 | 4.29e-125 | 375 |
MsG0680035075.01.T01 | MTR_3g028720 | 45.783 | 415 | 205 | 5 | 15 | 409 | 9 | 423 | 8.02e-125 | 371 |
MsG0680035075.01.T01 | MTR_4g066630 | 51.724 | 348 | 164 | 3 | 29 | 372 | 25 | 372 | 8.04e-125 | 369 |
MsG0680035075.01.T01 | MTR_4g015460 | 41.096 | 511 | 236 | 10 | 25 | 499 | 22 | 503 | 1.59e-123 | 370 |
MsG0680035075.01.T01 | MTR_6g078330 | 48.518 | 371 | 179 | 5 | 19 | 381 | 13 | 379 | 1.79e-123 | 366 |
MsG0680035075.01.T01 | MTR_2g022710 | 43.810 | 420 | 216 | 5 | 43 | 442 | 35 | 454 | 4.78e-123 | 368 |
MsG0680035075.01.T01 | MTR_7g033860 | 41.684 | 475 | 242 | 11 | 45 | 496 | 50 | 512 | 9.85e-123 | 369 |
MsG0680035075.01.T01 | MTR_2g022710 | 43.810 | 420 | 216 | 5 | 43 | 442 | 35 | 454 | 1.00e-122 | 367 |
MsG0680035075.01.T01 | MTR_2g022710 | 44.390 | 410 | 208 | 5 | 110 | 499 | 1 | 410 | 2.12e-121 | 362 |
MsG0680035075.01.T01 | MTR_0108s0030 | 41.703 | 458 | 248 | 9 | 45 | 496 | 5 | 449 | 2.66e-121 | 363 |
MsG0680035075.01.T01 | MTR_2g079580 | 45.833 | 384 | 191 | 3 | 43 | 409 | 32 | 415 | 8.77e-121 | 360 |
MsG0680035075.01.T01 | MTR_4g066640 | 50.000 | 368 | 175 | 7 | 11 | 372 | 6 | 370 | 3.57e-120 | 358 |
MsG0680035075.01.T01 | MTR_2g022710 | 45.195 | 385 | 193 | 4 | 43 | 409 | 35 | 419 | 6.16e-120 | 358 |
MsG0680035075.01.T01 | MTR_3g028720 | 47.154 | 369 | 187 | 4 | 12 | 372 | 3 | 371 | 1.31e-116 | 349 |
MsG0680035075.01.T01 | MTR_4g016920 | 43.921 | 403 | 208 | 5 | 110 | 498 | 1 | 399 | 3.57e-114 | 344 |
MsG0680035075.01.T01 | MTR_2g022710 | 44.892 | 372 | 187 | 4 | 43 | 396 | 35 | 406 | 3.30e-113 | 341 |
MsG0680035075.01.T01 | MTR_1g088630 | 41.741 | 448 | 217 | 8 | 62 | 495 | 14 | 431 | 5.68e-113 | 342 |
MsG0680035075.01.T01 | MTR_2g022710 | 49.211 | 317 | 160 | 1 | 43 | 358 | 35 | 351 | 1.20e-112 | 340 |
MsG0680035075.01.T01 | MTR_7g051510 | 40.803 | 473 | 246 | 10 | 44 | 497 | 76 | 533 | 4.86e-111 | 340 |
MsG0680035075.01.T01 | MTR_7g068900 | 43.552 | 411 | 209 | 7 | 105 | 498 | 17 | 421 | 5.24e-109 | 333 |
MsG0680035075.01.T01 | MTR_7g051610 | 40.126 | 476 | 243 | 11 | 44 | 496 | 76 | 532 | 3.21e-106 | 327 |
MsG0680035075.01.T01 | MTR_7g051650 | 39.241 | 474 | 251 | 10 | 44 | 496 | 76 | 533 | 5.25e-106 | 327 |
MsG0680035075.01.T01 | MTR_7g051650 | 38.608 | 474 | 250 | 10 | 44 | 496 | 76 | 529 | 6.01e-104 | 321 |
MsG0680035075.01.T01 | MTR_1g088630 | 46.106 | 321 | 145 | 3 | 40 | 358 | 24 | 318 | 1.61e-93 | 289 |
MsG0680035075.01.T01 | MTR_4g016920 | 53.226 | 248 | 115 | 1 | 110 | 356 | 1 | 248 | 8.85e-92 | 282 |
MsG0680035075.01.T01 | MTR_7g056747 | 40.852 | 399 | 221 | 9 | 104 | 496 | 9 | 398 | 5.76e-90 | 281 |
MsG0680035075.01.T01 | MTR_1g088630 | 50.373 | 268 | 129 | 2 | 40 | 305 | 24 | 289 | 2.06e-87 | 271 |
MsG0680035075.01.T01 | MTR_8g038650 | 47.826 | 92 | 48 | 0 | 265 | 356 | 57 | 148 | 5.19e-22 | 93.2 |
MsG0680035075.01.T01 | MTR_4g122980 | 25.547 | 411 | 244 | 14 | 102 | 499 | 175 | 536 | 8.67e-20 | 93.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035075.01.T01 | AT3G18080 | 76.892 | 489 | 97 | 2 | 25 | 497 | 21 | 509 | 0.0 | 784 |
MsG0680035075.01.T01 | AT3G18070 | 71.487 | 491 | 112 | 4 | 25 | 499 | 16 | 494 | 0.0 | 733 |
MsG0680035075.01.T01 | AT3G18070 | 71.283 | 491 | 119 | 4 | 25 | 499 | 16 | 500 | 0.0 | 730 |
MsG0680035075.01.T01 | AT3G18070 | 73.714 | 350 | 85 | 3 | 26 | 374 | 17 | 360 | 0.0 | 545 |
MsG0680035075.01.T01 | AT3G18070 | 71.818 | 330 | 77 | 2 | 186 | 499 | 94 | 423 | 4.23e-176 | 502 |
MsG0680035075.01.T01 | AT3G18070 | 63.750 | 80 | 25 | 1 | 25 | 104 | 16 | 91 | 1.64e-25 | 108 |
MsG0680035075.01.T01 | AT3G18070 | 72.990 | 311 | 68 | 2 | 205 | 499 | 1 | 311 | 4.03e-169 | 479 |
MsG0680035075.01.T01 | AT1G26560 | 50.105 | 475 | 215 | 6 | 43 | 495 | 32 | 506 | 2.30e-167 | 483 |
MsG0680035075.01.T01 | AT5G54570 | 51.245 | 482 | 212 | 6 | 37 | 495 | 24 | 505 | 2.15e-165 | 479 |
MsG0680035075.01.T01 | AT5G44640 | 47.929 | 507 | 238 | 9 | 13 | 499 | 5 | 505 | 8.65e-156 | 453 |
MsG0680035075.01.T01 | AT2G44450 | 49.792 | 480 | 218 | 7 | 40 | 499 | 28 | 504 | 6.42e-153 | 446 |
MsG0680035075.01.T01 | AT1G61820 | 48.414 | 473 | 220 | 7 | 48 | 497 | 35 | 506 | 2.53e-152 | 444 |
MsG0680035075.01.T01 | AT1G02850 | 48.180 | 467 | 219 | 7 | 44 | 495 | 27 | 485 | 3.72e-152 | 443 |
MsG0680035075.01.T01 | AT5G42260 | 47.610 | 502 | 237 | 8 | 10 | 491 | 2 | 497 | 2.48e-150 | 439 |
MsG0680035075.01.T01 | AT2G44480 | 46.186 | 485 | 239 | 6 | 33 | 496 | 26 | 509 | 1.50e-149 | 437 |
MsG0680035075.01.T01 | AT2G25630 | 47.667 | 493 | 238 | 9 | 17 | 499 | 5 | 487 | 1.54e-149 | 436 |
MsG0680035075.01.T01 | AT2G44480 | 46.186 | 485 | 239 | 6 | 33 | 496 | 57 | 540 | 3.75e-149 | 437 |
MsG0680035075.01.T01 | AT4G21760 | 46.087 | 460 | 237 | 4 | 48 | 499 | 59 | 515 | 1.32e-148 | 436 |
MsG0680035075.01.T01 | AT5G36890 | 46.186 | 485 | 225 | 7 | 31 | 495 | 11 | 479 | 1.60e-148 | 434 |
MsG0680035075.01.T01 | AT5G36890 | 46.186 | 485 | 225 | 7 | 31 | 495 | 11 | 479 | 1.60e-148 | 434 |
MsG0680035075.01.T01 | AT4G21760 | 45.319 | 470 | 236 | 4 | 48 | 499 | 59 | 525 | 3.67e-148 | 435 |
MsG0680035075.01.T01 | AT1G02850 | 46.122 | 490 | 218 | 8 | 44 | 495 | 27 | 508 | 8.36e-148 | 433 |
MsG0680035075.01.T01 | AT1G02850 | 46.029 | 491 | 218 | 9 | 44 | 495 | 27 | 509 | 2.88e-146 | 429 |
MsG0680035075.01.T01 | AT5G54570 | 50.351 | 427 | 191 | 4 | 37 | 442 | 24 | 450 | 3.05e-144 | 422 |
MsG0680035075.01.T01 | AT5G24550 | 44.841 | 504 | 252 | 8 | 20 | 497 | 8 | 511 | 2.63e-143 | 422 |
MsG0680035075.01.T01 | AT3G60130 | 47.158 | 475 | 225 | 8 | 43 | 495 | 30 | 500 | 2.99e-142 | 419 |
MsG0680035075.01.T01 | AT1G02850 | 46.039 | 467 | 202 | 8 | 44 | 495 | 27 | 458 | 4.72e-142 | 417 |
MsG0680035075.01.T01 | AT1G61810 | 45.551 | 472 | 235 | 6 | 48 | 497 | 38 | 509 | 1.32e-141 | 417 |
MsG0680035075.01.T01 | AT4G27830 | 43.200 | 500 | 250 | 9 | 12 | 495 | 3 | 484 | 4.23e-141 | 416 |
MsG0680035075.01.T01 | AT5G54570 | 51.471 | 408 | 176 | 5 | 110 | 495 | 1 | 408 | 3.22e-137 | 403 |
MsG0680035075.01.T01 | AT3G60140 | 43.452 | 504 | 255 | 9 | 18 | 497 | 7 | 504 | 5.15e-137 | 407 |
MsG0680035075.01.T01 | AT1G61810 | 45.633 | 458 | 227 | 6 | 48 | 483 | 38 | 495 | 3.17e-136 | 404 |
MsG0680035075.01.T01 | AT5G24540 | 45.437 | 504 | 249 | 8 | 20 | 497 | 8 | 511 | 5.10e-136 | 404 |
MsG0680035075.01.T01 | AT1G60090 | 41.818 | 495 | 255 | 7 | 15 | 495 | 7 | 482 | 4.06e-135 | 400 |
MsG0680035075.01.T01 | AT2G44470 | 42.717 | 508 | 259 | 9 | 17 | 497 | 5 | 507 | 4.98e-135 | 403 |
MsG0680035075.01.T01 | AT2G44460 | 45.276 | 508 | 251 | 10 | 15 | 498 | 3 | 507 | 1.09e-134 | 402 |
MsG0680035075.01.T01 | AT4G27820 | 44.989 | 469 | 235 | 7 | 42 | 495 | 22 | 482 | 2.40e-134 | 398 |
MsG0680035075.01.T01 | AT1G60090 | 41.283 | 499 | 259 | 7 | 15 | 495 | 7 | 489 | 2.69e-134 | 398 |
MsG0680035075.01.T01 | AT1G51470 | 44.444 | 486 | 239 | 11 | 34 | 497 | 35 | 511 | 6.82e-132 | 392 |
MsG0680035075.01.T01 | AT4G22100 | 42.275 | 466 | 247 | 7 | 45 | 495 | 24 | 482 | 2.74e-131 | 390 |
MsG0680035075.01.T01 | AT1G47600 | 44.513 | 483 | 242 | 12 | 34 | 497 | 35 | 510 | 1.43e-130 | 389 |
MsG0680035075.01.T01 | AT1G47600 | 44.421 | 484 | 242 | 12 | 34 | 497 | 35 | 511 | 2.38e-130 | 388 |
MsG0680035075.01.T01 | AT1G45191 | 42.333 | 463 | 253 | 5 | 44 | 498 | 30 | 486 | 1.20e-129 | 386 |
MsG0680035075.01.T01 | AT1G75940 | 44.444 | 486 | 232 | 12 | 43 | 495 | 37 | 517 | 4.62e-128 | 383 |
MsG0680035075.01.T01 | AT2G44490 | 42.678 | 478 | 246 | 10 | 45 | 495 | 16 | 492 | 1.70e-127 | 383 |
MsG0680035075.01.T01 | AT3G62750 | 41.996 | 481 | 243 | 9 | 31 | 495 | 13 | 473 | 6.83e-127 | 379 |
MsG0680035075.01.T01 | AT3G21370 | 43.461 | 497 | 244 | 13 | 28 | 495 | 23 | 511 | 7.00e-127 | 380 |
MsG0680035075.01.T01 | AT3G62750 | 41.996 | 481 | 243 | 9 | 31 | 495 | 39 | 499 | 2.10e-126 | 379 |
MsG0680035075.01.T01 | AT3G09260 | 41.633 | 502 | 263 | 10 | 20 | 497 | 17 | 512 | 5.79e-126 | 377 |
MsG0680035075.01.T01 | AT2G44480 | 46.437 | 407 | 198 | 4 | 110 | 496 | 1 | 407 | 9.38e-126 | 373 |
MsG0680035075.01.T01 | AT1G45191 | 41.365 | 469 | 255 | 6 | 44 | 498 | 30 | 492 | 1.37e-125 | 376 |
MsG0680035075.01.T01 | AT1G45191 | 41.139 | 474 | 254 | 6 | 44 | 498 | 30 | 497 | 3.45e-125 | 375 |
MsG0680035075.01.T01 | AT1G66280 | 42.270 | 511 | 266 | 11 | 10 | 495 | 4 | 510 | 5.61e-125 | 375 |
MsG0680035075.01.T01 | AT5G28510 | 41.683 | 511 | 267 | 12 | 16 | 497 | 13 | 521 | 1.16e-124 | 374 |
MsG0680035075.01.T01 | AT5G26000 | 42.270 | 511 | 260 | 10 | 15 | 495 | 6 | 511 | 2.29e-124 | 374 |
MsG0680035075.01.T01 | AT3G60120 | 43.685 | 483 | 239 | 11 | 43 | 497 | 14 | 491 | 2.47e-124 | 374 |
MsG0680035075.01.T01 | AT1G45191 | 40.664 | 482 | 257 | 6 | 44 | 498 | 30 | 509 | 8.28e-124 | 372 |
MsG0680035075.01.T01 | AT1G02850 | 47.015 | 402 | 173 | 6 | 44 | 409 | 27 | 424 | 1.65e-123 | 368 |
MsG0680035075.01.T01 | AT3G03640 | 41.879 | 511 | 259 | 13 | 18 | 497 | 11 | 514 | 4.65e-123 | 370 |
MsG0680035075.01.T01 | AT1G66270 | 42.032 | 502 | 258 | 11 | 21 | 497 | 19 | 512 | 6.04e-123 | 370 |
MsG0680035075.01.T01 | AT3G18070 | 70.954 | 241 | 54 | 2 | 186 | 410 | 94 | 334 | 1.95e-122 | 362 |
MsG0680035075.01.T01 | AT3G18070 | 63.750 | 80 | 25 | 1 | 25 | 104 | 16 | 91 | 5.53e-26 | 108 |
MsG0680035075.01.T01 | AT2G32860 | 42.558 | 477 | 249 | 8 | 48 | 499 | 99 | 575 | 1.28e-121 | 369 |
MsG0680035075.01.T01 | AT2G32860 | 43.067 | 476 | 247 | 10 | 48 | 499 | 99 | 574 | 3.23e-121 | 368 |
MsG0680035075.01.T01 | AT1G61810 | 45.477 | 409 | 202 | 5 | 110 | 497 | 1 | 409 | 7.64e-121 | 361 |
MsG0680035075.01.T01 | AT1G66270 | 41.633 | 502 | 258 | 12 | 21 | 497 | 19 | 510 | 1.65e-119 | 361 |
MsG0680035075.01.T01 | AT1G52400 | 43.361 | 482 | 239 | 14 | 43 | 495 | 39 | 515 | 1.99e-119 | 361 |
MsG0680035075.01.T01 | AT1G52400 | 43.361 | 482 | 239 | 14 | 43 | 495 | 39 | 515 | 1.99e-119 | 361 |
MsG0680035075.01.T01 | AT3G60130 | 46.247 | 413 | 197 | 7 | 104 | 495 | 40 | 448 | 1.21e-118 | 357 |
MsG0680035075.01.T01 | AT3G60130 | 46.517 | 402 | 201 | 7 | 104 | 495 | 40 | 437 | 1.19e-117 | 353 |
MsG0680035075.01.T01 | AT3G18070 | 72.523 | 222 | 45 | 2 | 205 | 410 | 1 | 222 | 3.01e-115 | 339 |
MsG0680035075.01.T01 | AT3G62740 | 38.229 | 497 | 264 | 10 | 17 | 495 | 7 | 478 | 1.30e-114 | 348 |
MsG0680035075.01.T01 | AT5G24540 | 44.072 | 447 | 226 | 6 | 20 | 442 | 8 | 454 | 1.39e-114 | 346 |
MsG0680035075.01.T01 | AT4G27830 | 44.030 | 402 | 203 | 7 | 110 | 495 | 1 | 396 | 1.68e-114 | 344 |
MsG0680035075.01.T01 | AT5G25980 | 40.408 | 490 | 259 | 11 | 32 | 495 | 40 | 522 | 4.66e-114 | 348 |
MsG0680035075.01.T01 | AT2G44470 | 41.150 | 452 | 234 | 9 | 17 | 442 | 5 | 450 | 1.39e-112 | 341 |
MsG0680035075.01.T01 | AT1G61820 | 47.945 | 365 | 168 | 5 | 154 | 497 | 4 | 367 | 1.68e-111 | 335 |
MsG0680035075.01.T01 | AT1G61810 | 44.241 | 382 | 193 | 5 | 48 | 409 | 38 | 419 | 1.28e-109 | 332 |
MsG0680035075.01.T01 | AT4G27820 | 44.389 | 401 | 204 | 6 | 110 | 495 | 1 | 397 | 1.98e-109 | 332 |
MsG0680035075.01.T01 | AT4G27820 | 44.389 | 401 | 204 | 6 | 110 | 495 | 1 | 397 | 1.98e-109 | 332 |
MsG0680035075.01.T01 | AT5G26000 | 41.978 | 455 | 232 | 8 | 15 | 442 | 6 | 455 | 2.18e-109 | 333 |
MsG0680035075.01.T01 | AT2G44480 | 50.467 | 321 | 154 | 4 | 33 | 350 | 57 | 375 | 5.69e-109 | 329 |
MsG0680035075.01.T01 | AT1G60270 | 46.111 | 360 | 179 | 5 | 43 | 391 | 24 | 379 | 6.95e-109 | 328 |
MsG0680035075.01.T01 | AT3G62750 | 41.492 | 429 | 217 | 8 | 31 | 445 | 39 | 447 | 7.91e-109 | 331 |
MsG0680035075.01.T01 | AT3G60140 | 41.748 | 412 | 214 | 6 | 18 | 409 | 7 | 412 | 1.83e-107 | 328 |
MsG0680035075.01.T01 | AT2G44450 | 48.596 | 356 | 163 | 5 | 161 | 499 | 1 | 353 | 3.53e-105 | 318 |
MsG0680035075.01.T01 | AT3G62750 | 42.040 | 402 | 203 | 7 | 110 | 495 | 1 | 388 | 1.64e-103 | 316 |
MsG0680035075.01.T01 | AT3G62750 | 42.040 | 402 | 203 | 7 | 110 | 495 | 1 | 388 | 1.64e-103 | 316 |
MsG0680035075.01.T01 | AT1G45191 | 45.015 | 331 | 176 | 2 | 44 | 372 | 30 | 356 | 1.41e-102 | 314 |
MsG0680035075.01.T01 | AT1G45191 | 45.015 | 331 | 176 | 2 | 44 | 372 | 30 | 356 | 1.42e-102 | 313 |
MsG0680035075.01.T01 | AT3G62740 | 38.462 | 442 | 231 | 9 | 17 | 442 | 7 | 423 | 3.98e-101 | 310 |
MsG0680035075.01.T01 | AT1G52400 | 42.623 | 427 | 213 | 12 | 43 | 442 | 39 | 460 | 1.48e-100 | 310 |
MsG0680035075.01.T01 | AT2G44470 | 43.407 | 364 | 192 | 7 | 17 | 372 | 5 | 362 | 7.85e-100 | 306 |
MsG0680035075.01.T01 | AT5G25980 | 39.631 | 434 | 232 | 9 | 32 | 442 | 40 | 466 | 1.49e-99 | 308 |
MsG0680035075.01.T01 | AT5G25980 | 39.631 | 434 | 232 | 9 | 32 | 442 | 40 | 466 | 1.49e-99 | 308 |
MsG0680035075.01.T01 | AT3G62750 | 44.785 | 326 | 166 | 3 | 31 | 356 | 13 | 324 | 5.67e-97 | 298 |
MsG0680035075.01.T01 | AT3G62750 | 44.785 | 326 | 166 | 3 | 31 | 356 | 13 | 324 | 5.67e-97 | 298 |
MsG0680035075.01.T01 | AT3G62750 | 44.785 | 326 | 166 | 3 | 31 | 356 | 39 | 350 | 3.16e-96 | 298 |
MsG0680035075.01.T01 | AT2G44460 | 45.833 | 360 | 172 | 8 | 161 | 498 | 3 | 361 | 6.32e-92 | 287 |
MsG0680035075.01.T01 | AT1G61810 | 47.909 | 263 | 135 | 2 | 48 | 308 | 38 | 300 | 6.75e-85 | 265 |
MsG0680035075.01.T01 | AT5G48375 | 38.293 | 410 | 184 | 8 | 70 | 461 | 53 | 411 | 7.55e-84 | 266 |
MsG0680035075.01.T01 | AT1G60270 | 45.051 | 293 | 149 | 4 | 110 | 391 | 1 | 292 | 2.01e-83 | 260 |
MsG0680035075.01.T01 | AT2G44480 | 44.224 | 303 | 151 | 3 | 212 | 496 | 1 | 303 | 1.38e-81 | 256 |
MsG0680035075.01.T01 | AT1G51490 | 40.181 | 331 | 170 | 11 | 50 | 371 | 27 | 338 | 1.96e-69 | 228 |
MsG0680035075.01.T01 | AT5G16580 | 39.249 | 293 | 152 | 7 | 178 | 451 | 12 | 297 | 3.70e-53 | 182 |
MsG0680035075.01.T01 | AT3G06510 | 26.485 | 404 | 239 | 16 | 105 | 499 | 159 | 513 | 7.84e-19 | 90.1 |
Find 103 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATTCATCCCCTTGTTTA+TGG | 0.184377 | 6:+98544377 | MsG0680035075.01.T01:CDS |
CCTATGTACTTATCTGAAAA+TGG | 0.261140 | 6:+98545162 | MsG0680035075.01.T01:CDS |
GTTCTTGTTAGTTCAGTTAA+TGG | 0.269019 | 6:+98541578 | MsG0680035075.01.T01:CDS |
GTATCCAAATGCACTGTTTC+AGG | 0.271354 | 6:-98541611 | None:intergenic |
AGGGTCGTGGCCCTAGTATT+TGG | 0.275337 | 6:+98541723 | MsG0680035075.01.T01:CDS |
TTCTTGTTAGTTCAGTTAAT+GGG | 0.276549 | 6:+98541579 | MsG0680035075.01.T01:CDS |
AACCAATATGCAGACATCTT+AGG | 0.282698 | 6:-98545534 | None:intergenic |
CTTCCTCCTTAGTGAACTTT+GGG | 0.285927 | 6:-98544442 | None:intergenic |
GCTGCTCTTGGCTATGATAA+TGG | 0.303187 | 6:+98543555 | MsG0680035075.01.T01:CDS |
AATTGTACAGCTGGAAATTC+AGG | 0.314656 | 6:+98543615 | MsG0680035075.01.T01:CDS |
GATAACTTTGAATGGAGATT+AGG | 0.315709 | 6:+98545456 | MsG0680035075.01.T01:CDS |
ATAACTTTGAATGGAGATTA+GGG | 0.318193 | 6:+98545457 | MsG0680035075.01.T01:CDS |
ATGGAACTGGCAAAGTAAAT+TGG | 0.320592 | 6:+98543085 | MsG0680035075.01.T01:CDS |
GGAAGGTGTTCAAAAGAATA+TGG | 0.324523 | 6:+98543591 | MsG0680035075.01.T01:CDS |
GATTGATAGCCAGGGACTTT+TGG | 0.337835 | 6:-98544548 | None:intergenic |
ACCAATATGCAGACATCTTA+GGG | 0.340920 | 6:-98545533 | None:intergenic |
ACAGGAATTGTCGCAAATAA+TGG | 0.342164 | 6:+98542628 | MsG0680035075.01.T01:intron |
TTTGGATAAAAGGCCTCTTT+TGG | 0.344761 | 6:+98545642 | MsG0680035075.01.T01:three_prime_UTR |
AAATTGTGAGCTACAGTATA+AGG | 0.347951 | 6:-98543645 | None:intergenic |
GAAACAGTGCATTTGGATAC+TGG | 0.355962 | 6:+98541614 | MsG0680035075.01.T01:CDS |
ACTTCCTCCTTAGTGAACTT+TGG | 0.357250 | 6:-98544443 | None:intergenic |
TTTCCTAAAGGGTTTGTGTT+TGG | 0.360877 | 6:+98541656 | MsG0680035075.01.T01:CDS |
ACTCCAAACACAAACCCTTT+AGG | 0.380059 | 6:-98541659 | None:intergenic |
TGGTAGTGAATAATGTGTTT+TGG | 0.386199 | 6:+98545624 | MsG0680035075.01.T01:three_prime_UTR |
AGAGCTAGAGACTTTCATAT+TGG | 0.394867 | 6:+98544045 | MsG0680035075.01.T01:CDS |
GGGTCGTGGCCCTAGTATTT+GGG | 0.395338 | 6:+98541724 | MsG0680035075.01.T01:CDS |
CCCCTAAGATGTCTGCATAT+TGG | 0.396318 | 6:+98545532 | MsG0680035075.01.T01:CDS |
CATTGCTTGATAACTTTGAA+TGG | 0.399596 | 6:+98545448 | MsG0680035075.01.T01:CDS |
ACTAGTATTGTCTTTGAAGA+TGG | 0.407904 | 6:+98541496 | MsG0680035075.01.T01:exon |
ATGAAAACATCCCAAATACT+AGG | 0.410209 | 6:-98541734 | None:intergenic |
TCAGCCTTTGATCTTGTAAG+AGG | 0.416498 | 6:-98544006 | None:intergenic |
GATGATGGAGCAAATGTGTT+TGG | 0.416603 | 6:+98545411 | MsG0680035075.01.T01:CDS |
CCAAGAGTTGTTGCTGCTCT+TGG | 0.417648 | 6:+98543543 | MsG0680035075.01.T01:CDS |
TTCCAATCCGATTGATAGCC+AGG | 0.422659 | 6:-98544557 | None:intergenic |
ATTTGTAGGTATGGATGATC+CGG | 0.427079 | 6:+98545302 | MsG0680035075.01.T01:intron |
AAGATATAGAGAGAAATATC+AGG | 0.431598 | 6:+98543695 | MsG0680035075.01.T01:CDS |
GAAAAGCAAAAGGGTAGGAT+TGG | 0.432684 | 6:+98543955 | MsG0680035075.01.T01:CDS |
ATGGAGACAGAGTGAAGAAC+TGG | 0.441462 | 6:+98543505 | MsG0680035075.01.T01:CDS |
AGAACTATGCAAAATATTGT+TGG | 0.445283 | 6:+98544410 | MsG0680035075.01.T01:CDS |
TGTGTTAGTGCTTCAATCAT+AGG | 0.447465 | 6:-98545749 | None:intergenic |
ATCGATTACTTGCTCGAAAA+GGG | 0.448910 | 6:+98543135 | MsG0680035075.01.T01:CDS |
GAATATGGAAATTGTACAGC+TGG | 0.451912 | 6:+98543606 | MsG0680035075.01.T01:CDS |
GTCTTTGAAGATGGTGATGT+TGG | 0.452280 | 6:+98541505 | MsG0680035075.01.T01:exon |
CTAAAGAAAGCTATAGATGA+TGG | 0.459612 | 6:+98545396 | MsG0680035075.01.T01:CDS |
AACTTTGATGCAGATGGAAC+TGG | 0.459795 | 6:+98543072 | MsG0680035075.01.T01:intron |
GAACTATGCAAAATATTGTT+GGG | 0.468791 | 6:+98544411 | MsG0680035075.01.T01:CDS |
AGTGCCTGAAACAGTGCATT+TGG | 0.469335 | 6:+98541607 | MsG0680035075.01.T01:CDS |
GATCGATTACTTGCTCGAAA+AGG | 0.469757 | 6:+98543134 | MsG0680035075.01.T01:CDS |
GTTTGTGTCACAGTTATGTC+TGG | 0.471489 | 6:-98545776 | None:intergenic |
TTAGGGTACACATCAAGGTT+TGG | 0.474691 | 6:+98545474 | MsG0680035075.01.T01:CDS |
TATTTCAACTCGAGAGCTAA+AGG | 0.475144 | 6:-98543300 | None:intergenic |
ATTGATACCAACAAAATCAA+TGG | 0.477296 | 6:-98544483 | None:intergenic |
CCAAGAGCAGCAACAACTCT+TGG | 0.484195 | 6:-98543543 | None:intergenic |
GGAGATTAGGGTACACATCA+AGG | 0.485807 | 6:+98545469 | MsG0680035075.01.T01:CDS |
GAGCTAAAGGAAGGTCATAA+TGG | 0.487554 | 6:-98543287 | None:intergenic |
GACTTGATTAATGCAAGTCT+TGG | 0.490418 | 6:+98545685 | MsG0680035075.01.T01:three_prime_UTR |
TGCTTATCAAGTAGAGGGTA+TGG | 0.494673 | 6:+98541691 | MsG0680035075.01.T01:CDS |
AAAAGTCCCTGGCTATCAAT+CGG | 0.514691 | 6:+98544550 | MsG0680035075.01.T01:CDS |
CTAGAGACTTTCATATTGGA+TGG | 0.515205 | 6:+98544049 | MsG0680035075.01.T01:CDS |
TGTTGTGTCATGCAAACCCT+TGG | 0.515909 | 6:-98545340 | None:intergenic |
TTGGCTATACAATGTACCAT+GGG | 0.531425 | 6:+98545092 | MsG0680035075.01.T01:CDS |
TCCCTGGCTATCAATCGGAT+TGG | 0.537085 | 6:+98544555 | MsG0680035075.01.T01:CDS |
GTTTCTTAAGATTCTAATTG+TGG | 0.539219 | 6:+98545604 | MsG0680035075.01.T01:three_prime_UTR |
GCAGGAAGATATAGATCTCA+TGG | 0.540465 | 6:+98542910 | MsG0680035075.01.T01:intron |
AACTTCTGCTTATCAAGTAG+AGG | 0.544999 | 6:+98541685 | MsG0680035075.01.T01:CDS |
GAGGGTATGGCTAGCAAAGA+GGG | 0.549403 | 6:+98541704 | MsG0680035075.01.T01:CDS |
CAAATCATTAATGTACATCA+AGG | 0.552581 | 6:+98545122 | MsG0680035075.01.T01:CDS |
TTTAGGAAAAGCAAAAGGGT+AGG | 0.554677 | 6:+98543950 | MsG0680035075.01.T01:intron |
TCTTGTTAGTTCAGTTAATG+GGG | 0.559570 | 6:+98541580 | MsG0680035075.01.T01:CDS |
TACATTGTAGAGACCAAAAG+AGG | 0.560172 | 6:-98545655 | None:intergenic |
TTAGTACTTACACAACGTTA+CGG | 0.561802 | 6:-98543338 | None:intergenic |
TTGGAAAATGTTACATTACC+CGG | 0.563963 | 6:-98545321 | None:intergenic |
TGAAAACATCCCAAATACTA+GGG | 0.582780 | 6:-98541733 | None:intergenic |
TAATGGTAGAGATTTGCATA+AGG | 0.585059 | 6:-98543270 | None:intergenic |
ACAAGAATAAACTATTACAA+AGG | 0.585424 | 6:+98545360 | MsG0680035075.01.T01:CDS |
TGGACCATGAGATTGAGAAC+CGG | 0.587343 | 6:-98542955 | None:intergenic |
ATTGTCGCAAATAATGGCAC+AGG | 0.588601 | 6:+98542634 | MsG0680035075.01.T01:CDS |
CAAGCAAAACCAAAAGTCCC+TGG | 0.590365 | 6:+98544539 | MsG0680035075.01.T01:CDS |
GGAGGAAGTGAATCTTGTGA+AGG | 0.592011 | 6:+98544457 | MsG0680035075.01.T01:CDS |
GAGGAAGTGAATCTTGTGAA+GGG | 0.593860 | 6:+98544458 | MsG0680035075.01.T01:CDS |
TTTCAGATAAGTACATAGGT+GGG | 0.594742 | 6:-98545158 | None:intergenic |
CAGACTCCCAAAGTTCACTA+AGG | 0.598238 | 6:+98544436 | MsG0680035075.01.T01:CDS |
ACTTCTGCTTATCAAGTAGA+GGG | 0.604107 | 6:+98541686 | MsG0680035075.01.T01:CDS |
CTTGGCTATACAATGTACCA+TGG | 0.606444 | 6:+98545091 | MsG0680035075.01.T01:CDS |
TGAGCCTCTTACAAGATCAA+AGG | 0.608751 | 6:+98544002 | MsG0680035075.01.T01:CDS |
AGAGGGTATGGCTAGCAAAG+AGG | 0.611917 | 6:+98541703 | MsG0680035075.01.T01:CDS |
ATGTGTTTGGATATCATGCT+TGG | 0.611957 | 6:+98545424 | MsG0680035075.01.T01:CDS |
ATGGCTAGCAAAGAGGGTCG+TGG | 0.616104 | 6:+98541710 | MsG0680035075.01.T01:CDS |
AATGATTTGTATAAGCCCCA+TGG | 0.619036 | 6:-98545108 | None:intergenic |
TTTGTAGGTATGGATGATCC+GGG | 0.619449 | 6:+98545303 | MsG0680035075.01.T01:intron |
TCCAATCCGATTGATAGCCA+GGG | 0.623481 | 6:-98544556 | None:intergenic |
TCAACTCGAGAGCTAAAGGA+AGG | 0.625800 | 6:-98543296 | None:intergenic |
TTGGATACTCACCATAAACA+AGG | 0.626001 | 6:-98544388 | None:intergenic |
AATACCGGTTCTCAATCTCA+TGG | 0.626644 | 6:+98542951 | MsG0680035075.01.T01:CDS |
CAGTGCATTTGGATACTGGA+GGG | 0.628351 | 6:+98541618 | MsG0680035075.01.T01:CDS |
ACTGGCAAAGTAAATTGGAA+AGG | 0.635766 | 6:+98543090 | MsG0680035075.01.T01:CDS |
TGGATACTCACCATAAACAA+GGG | 0.638550 | 6:-98544387 | None:intergenic |
GCTCTCGAGTTGAAATACAA+CGG | 0.657864 | 6:+98543306 | MsG0680035075.01.T01:CDS |
GGATACTCACCATAAACAAG+GGG | 0.663952 | 6:-98544386 | None:intergenic |
ACTCCCAAAGTTCACTAAGG+AGG | 0.671178 | 6:+98544439 | MsG0680035075.01.T01:CDS |
ACAGTGCATTTGGATACTGG+AGG | 0.685224 | 6:+98541617 | MsG0680035075.01.T01:CDS |
CCAATATGCAGACATCTTAG+GGG | 0.704502 | 6:-98545532 | None:intergenic |
TGGCTATACAATGTACCATG+GGG | 0.741096 | 6:+98545093 | MsG0680035075.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTAATATTTTTAAAAA+TGG | - | Chr6:98544618-98544637 | None:intergenic | 0.0% |
!!! | TGATTTTTTCAAATTATTAA+CGG | + | Chr6:98544255-98544274 | MsG0680035075.01.T01:intron | 10.0% |
!!! | TTAATCTCTTTTAAAAAAAT+TGG | + | Chr6:98542350-98542369 | MsG0680035075.01.T01:intron | 10.0% |
!! | AAGAATAATTAATTGAGATT+AGG | - | Chr6:98541785-98541804 | None:intergenic | 15.0% |
!! | ACATTATATAATATGTTGTT+TGG | - | Chr6:98542798-98542817 | None:intergenic | 15.0% |
!! | ATAGAAATATTTGAATTACT+TGG | - | Chr6:98542989-98543008 | None:intergenic | 15.0% |
!!! | AAATGTGATTTTGTTTTATA+TGG | + | Chr6:98543396-98543415 | MsG0680035075.01.T01:intron | 15.0% |
!!! | ATATTTTTAAAAATGGTTGA+AGG | - | Chr6:98544611-98544630 | None:intergenic | 15.0% |
!!! | GTAAATATTTAATGATTTGT+AGG | + | Chr6:98545288-98545307 | MsG0680035075.01.T01:intron | 15.0% |
!! | AAATTAACAAATATGAAGCA+CGG | - | Chr6:98544322-98544341 | None:intergenic | 20.0% |
!! | AAGAAGATTGAAATAGAAAA+AGG | - | Chr6:98542103-98542122 | None:intergenic | 20.0% |
!! | AATTTCTTAGTGTATCTTTA+TGG | + | Chr6:98544337-98544356 | MsG0680035075.01.T01:intron | 20.0% |
!! | ACAAGAATAAACTATTACAA+AGG | + | Chr6:98545360-98545379 | MsG0680035075.01.T01:CDS | 20.0% |
!! | TAAGTACTAAAATACCTTTA+TGG | + | Chr6:98543351-98543370 | MsG0680035075.01.T01:intron | 20.0% |
!! | TATTGTTTCAAATTCATAAC+AGG | + | Chr6:98542610-98542629 | MsG0680035075.01.T01:intron | 20.0% |
!! | TTTCTAATTGAAGAAATTGT+TGG | + | Chr6:98544087-98544106 | MsG0680035075.01.T01:intron | 20.0% |
!!! | AAAATGAAGCATTCAAATAA+AGG | - | Chr6:98545210-98545229 | None:intergenic | 20.0% |
!!! | AAATTGGTAAGATTTTGATT+TGG | + | Chr6:98542366-98542385 | MsG0680035075.01.T01:intron | 20.0% |
!!! | AAGGATGAATTTTCAAATTT+GGG | + | Chr6:98545253-98545272 | MsG0680035075.01.T01:intron | 20.0% |
!!! | AATAATGTGTTTTGGATAAA+AGG | + | Chr6:98545632-98545651 | MsG0680035075.01.T01:three_prime_UTR | 20.0% |
!!! | AATGATCGATGTTTTAAAAT+TGG | + | Chr6:98543437-98543456 | MsG0680035075.01.T01:intron | 20.0% |
!!! | AATTAGTTCTGCTTTTAATA+TGG | + | Chr6:98542012-98542031 | MsG0680035075.01.T01:intron | 20.0% |
!!! | ACATATTTTAGAGCTTAAAT+TGG | - | Chr6:98544677-98544696 | None:intergenic | 20.0% |
!!! | ATGTTGGTTTTTGTAAAATT+TGG | + | Chr6:98541959-98541978 | MsG0680035075.01.T01:intron | 20.0% |
!!! | ATTTATATGTGATACTTTTC+AGG | + | Chr6:98545059-98545078 | MsG0680035075.01.T01:intron | 20.0% |
!!! | GTAAAAATGTGTGTTTTTAT+TGG | + | Chr6:98541860-98541879 | MsG0680035075.01.T01:intron | 20.0% |
!!! | TAAAAACACACATTTTTACA+TGG | - | Chr6:98541859-98541878 | None:intergenic | 20.0% |
!!! | TAAGGATGAATTTTCAAATT+TGG | + | Chr6:98545252-98545271 | MsG0680035075.01.T01:intron | 20.0% |
!!! | TATTTAATGATTTGTAGGTA+TGG | + | Chr6:98545293-98545312 | MsG0680035075.01.T01:intron | 20.0% |
!!! | TCTAAATACTAACATAGTTT+TGG | + | Chr6:98543179-98543198 | MsG0680035075.01.T01:intron | 20.0% |
!!! | TGTATTGATGAAATGATTTA+GGG | + | Chr6:98541897-98541916 | MsG0680035075.01.T01:intron | 20.0% |
!!! | TTCAATCTTCTTCTTTTTTA+GGG | + | Chr6:98542111-98542130 | MsG0680035075.01.T01:intron | 20.0% |
!!! | TTGTATTGATGAAATGATTT+AGG | + | Chr6:98541896-98541915 | MsG0680035075.01.T01:intron | 20.0% |
!!! | TTTCAATCTTCTTCTTTTTT+AGG | + | Chr6:98542110-98542129 | MsG0680035075.01.T01:intron | 20.0% |
!!! | TTTTTAGTCCTGTAAAATTA+CGG | - | Chr6:98543377-98543396 | None:intergenic | 20.0% |
! | AAAACAATGACTAAAATCGA+CGG | - | Chr6:98544734-98544753 | None:intergenic | 25.0% |
! | AACAAATTGTATAAACCACT+TGG | - | Chr6:98543895-98543914 | None:intergenic | 25.0% |
! | AAGATATAGAGAGAAATATC+AGG | + | Chr6:98543695-98543714 | MsG0680035075.01.T01:CDS | 25.0% |
! | AATTCATCCTTACAAAAAGA+AGG | - | Chr6:98545244-98545263 | None:intergenic | 25.0% |
! | AGAACTATGCAAAATATTGT+TGG | + | Chr6:98544410-98544429 | MsG0680035075.01.T01:CDS | 25.0% |
! | ATTGATACCAACAAAATCAA+TGG | - | Chr6:98544486-98544505 | None:intergenic | 25.0% |
! | CAAATCATTAATGTACATCA+AGG | + | Chr6:98545122-98545141 | MsG0680035075.01.T01:CDS | 25.0% |
! | CTATGTTAGTATTTAGACTA+TGG | - | Chr6:98543176-98543195 | None:intergenic | 25.0% |
! | GAACTATGCAAAATATTGTT+GGG | + | Chr6:98544411-98544430 | MsG0680035075.01.T01:CDS | 25.0% |
! | GTTTCTTAAGATTCTAATTG+TGG | + | Chr6:98545604-98545623 | MsG0680035075.01.T01:three_prime_UTR | 25.0% |
! | TAAATGTAAGGTTCATACTA+AGG | - | Chr6:98542770-98542789 | None:intergenic | 25.0% |
! | TAGTTAGAGACTAAATTGAA+TGG | - | Chr6:98544645-98544664 | None:intergenic | 25.0% |
! | TATTGGATGGTAAAAATTGT+TGG | + | Chr6:98544062-98544081 | MsG0680035075.01.T01:intron | 25.0% |
! | TGAATTACTTGGAAAAATTC+TGG | - | Chr6:98542978-98542997 | None:intergenic | 25.0% |
! | TTCAATCATATTCTGTCTAT+TGG | - | Chr6:98542287-98542306 | None:intergenic | 25.0% |
! | TTCTTGTTAGTTCAGTTAAT+GGG | + | Chr6:98541579-98541598 | MsG0680035075.01.T01:CDS | 25.0% |
! | TTTCAAATTATTAACGGTGT+CGG | + | Chr6:98544261-98544280 | MsG0680035075.01.T01:intron | 25.0% |
!! | ACAAAAACCAACATACTTTT+TGG | - | Chr6:98541953-98541972 | None:intergenic | 25.0% |
!! | ACAATATTTTGCATAGTTCT+TGG | - | Chr6:98544410-98544429 | None:intergenic | 25.0% |
!! | CTCAAATATTTTCAATTTGC+AGG | + | Chr6:98542892-98542911 | MsG0680035075.01.T01:intron | 25.0% |
!! | CTCAACAATTTACTTCTTTT+TGG | - | Chr6:98545574-98545593 | None:intergenic | 25.0% |
!! | GAATTTTGTTGGATTTTGTT+TGG | + | Chr6:98543977-98543996 | MsG0680035075.01.T01:CDS | 25.0% |
!! | GTCCAAAAAATACTTCTTTT+TGG | + | Chr6:98542517-98542536 | MsG0680035075.01.T01:intron | 25.0% |
!!! | AAAAGAAGTATTTTTTGGAC+TGG | - | Chr6:98542517-98542536 | None:intergenic | 25.0% |
!!! | AGCTAAATTTTGATCAATAC+CGG | + | Chr6:98542936-98542955 | MsG0680035075.01.T01:CDS | 25.0% |
!!! | GACCAAAAAGAAGTATTTTT+TGG | - | Chr6:98542522-98542541 | None:intergenic | 25.0% |
!!! | GATTTTTGTTTCAAGACATA+TGG | + | Chr6:98543486-98543505 | MsG0680035075.01.T01:CDS | 25.0% |
!!! | GTTTTGATGTTTTTATCTTG+TGG | + | Chr6:98543912-98543931 | MsG0680035075.01.T01:intron | 25.0% |
!!! | GTTTTTTAGGAAAAGCAAAA+GGG | + | Chr6:98543946-98543965 | MsG0680035075.01.T01:intron | 25.0% |
!!! | TCAATCTTCTTCTTTTTTAG+GGG | + | Chr6:98542112-98542131 | MsG0680035075.01.T01:intron | 25.0% |
!!! | TTTTGATTCTTGTTTAGATC+AGG | + | Chr6:98543729-98543748 | MsG0680035075.01.T01:intron | 25.0% |
AAATTGTGAGCTACAGTATA+AGG | - | Chr6:98543648-98543667 | None:intergenic | 30.0% | |
AACATTGAAGATGCTAAGAA+TGG | + | Chr6:98544916-98544935 | MsG0680035075.01.T01:intron | 30.0% | |
AAGAAAATCAATGTCAGTCA+TGG | - | Chr6:98544892-98544911 | None:intergenic | 30.0% | |
ACTTGTTTCAAACTTACTCT+TGG | - | Chr6:98544955-98544974 | None:intergenic | 30.0% | |
ATGAAAACATCCCAAATACT+AGG | - | Chr6:98541737-98541756 | None:intergenic | 30.0% | |
CAGGTATATGCTTAGATTAT+CGG | + | Chr6:98543748-98543767 | MsG0680035075.01.T01:intron | 30.0% | |
CATAAGAATTGTATGATGCA+CGG | + | Chr6:98544141-98544160 | MsG0680035075.01.T01:intron | 30.0% | |
CCTATGTACTTATCTGAAAA+TGG | + | Chr6:98545162-98545181 | MsG0680035075.01.T01:CDS | 30.0% | |
CTAAAGAAAGCTATAGATGA+TGG | + | Chr6:98545396-98545415 | MsG0680035075.01.T01:CDS | 30.0% | |
GTTCTTGTTAGTTCAGTTAA+TGG | + | Chr6:98541578-98541597 | MsG0680035075.01.T01:CDS | 30.0% | |
TAATGGTAGAGATTTGCATA+AGG | - | Chr6:98543273-98543292 | None:intergenic | 30.0% | |
TCTTGTTAGTTCAGTTAATG+GGG | + | Chr6:98541580-98541599 | MsG0680035075.01.T01:CDS | 30.0% | |
TGAAAACATCCCAAATACTA+GGG | - | Chr6:98541736-98541755 | None:intergenic | 30.0% | |
TGTTTGGCAAGTTAAATGTA+AGG | - | Chr6:98542782-98542801 | None:intergenic | 30.0% | |
TTAGAGACTAAATTGAATGG+TGG | - | Chr6:98544642-98544661 | None:intergenic | 30.0% | |
TTAGTACTTACACAACGTTA+CGG | - | Chr6:98543341-98543360 | None:intergenic | 30.0% | |
TTGGAAAATGTTACATTACC+CGG | - | Chr6:98545324-98545343 | None:intergenic | 30.0% | |
TTTCAGATAAGTACATAGGT+GGG | - | Chr6:98545161-98545180 | None:intergenic | 30.0% | |
! | AAGGTTCATACTAAGGATTT+TGG | - | Chr6:98542763-98542782 | None:intergenic | 30.0% |
! | ACTAGTATTGTCTTTGAAGA+TGG | + | Chr6:98541496-98541515 | MsG0680035075.01.T01:exon | 30.0% |
! | AGTAGAGATGTTTTTCCTAA+AGG | + | Chr6:98541644-98541663 | MsG0680035075.01.T01:CDS | 30.0% |
! | ATTTGAAACTTTGATGCAGA+TGG | + | Chr6:98543066-98543085 | MsG0680035075.01.T01:intron | 30.0% |
! | CCATTTTCAGATAAGTACAT+AGG | - | Chr6:98545165-98545184 | None:intergenic | 30.0% |
! | CTAATGTGTTTAAGCTCTAA+AGG | - | Chr6:98542701-98542720 | None:intergenic | 30.0% |
! | GATGTTTTCATCAAAAAACC+TGG | + | Chr6:98541746-98541765 | MsG0680035075.01.T01:CDS | 30.0% |
! | GGTAATGTAACATTTTCCAA+GGG | + | Chr6:98545324-98545343 | MsG0680035075.01.T01:CDS | 30.0% |
! | GTAGAGATGTTTTTCCTAAA+GGG | + | Chr6:98541645-98541664 | MsG0680035075.01.T01:CDS | 30.0% |
! | GTCTTAACCTTCTTTTTGTA+AGG | + | Chr6:98545234-98545253 | MsG0680035075.01.T01:intron | 30.0% |
! | TTATGGTGTTTAATTTCCAC+AGG | + | Chr6:98544354-98544373 | MsG0680035075.01.T01:intron | 30.0% |
! | TTTTCAGATAAGTACATAGG+TGG | - | Chr6:98545162-98545181 | None:intergenic | 30.0% |
!! | TGGTAGTGAATAATGTGTTT+TGG | + | Chr6:98545624-98545643 | MsG0680035075.01.T01:three_prime_UTR | 30.0% |
!!! | AACCAACATACTTTTTGGTT+TGG | - | Chr6:98541948-98541967 | None:intergenic | 30.0% |
!!! | GGTTTTTTAGGAAAAGCAAA+AGG | + | Chr6:98543945-98543964 | MsG0680035075.01.T01:intron | 30.0% |
!!! | TCGATGTTTTAAAATTGGAC+AGG | + | Chr6:98543442-98543461 | MsG0680035075.01.T01:intron | 30.0% |
AACCAATATGCAGACATCTT+AGG | - | Chr6:98545537-98545556 | None:intergenic | 35.0% | |
AACTTCTGCTTATCAAGTAG+AGG | + | Chr6:98541685-98541704 | MsG0680035075.01.T01:CDS | 35.0% | |
AAGATGTGTCATAGTGACTT+TGG | + | Chr6:98543787-98543806 | MsG0680035075.01.T01:intron | 35.0% | |
AATTGTACAGCTGGAAATTC+AGG | + | Chr6:98543615-98543634 | MsG0680035075.01.T01:CDS | 35.0% | |
ACAGGAATTGTCGCAAATAA+TGG | + | Chr6:98542628-98542647 | MsG0680035075.01.T01:intron | 35.0% | |
ACCAATATGCAGACATCTTA+GGG | - | Chr6:98545536-98545555 | None:intergenic | 35.0% | |
ACTGGCAAAGTAAATTGGAA+AGG | + | Chr6:98543090-98543109 | MsG0680035075.01.T01:CDS | 35.0% | |
ACTTCTGCTTATCAAGTAGA+GGG | + | Chr6:98541686-98541705 | MsG0680035075.01.T01:CDS | 35.0% | |
AGAGCTAGAGACTTTCATAT+TGG | + | Chr6:98544045-98544064 | MsG0680035075.01.T01:CDS | 35.0% | |
ATCGATTACTTGCTCGAAAA+GGG | + | Chr6:98543135-98543154 | MsG0680035075.01.T01:CDS | 35.0% | |
ATGGAACTGGCAAAGTAAAT+TGG | + | Chr6:98543085-98543104 | MsG0680035075.01.T01:CDS | 35.0% | |
ATGTGTTTGGATATCATGCT+TGG | + | Chr6:98545424-98545443 | MsG0680035075.01.T01:CDS | 35.0% | |
ATTTGTAGGTATGGATGATC+CGG | + | Chr6:98545302-98545321 | MsG0680035075.01.T01:intron | 35.0% | |
CGTGCATCATACAATTCTTA+TGG | - | Chr6:98544143-98544162 | None:intergenic | 35.0% | |
CTAGAGACTTTCATATTGGA+TGG | + | Chr6:98544049-98544068 | MsG0680035075.01.T01:CDS | 35.0% | |
CTGTAAAATTACGGCCATAA+AGG | - | Chr6:98543368-98543387 | None:intergenic | 35.0% | |
GAAACTTCAACGAAATCACA+TGG | + | Chr6:98543825-98543844 | MsG0680035075.01.T01:intron | 35.0% | |
GAATATGGAAATTGTACAGC+TGG | + | Chr6:98543606-98543625 | MsG0680035075.01.T01:CDS | 35.0% | |
GACTTGATTAATGCAAGTCT+TGG | + | Chr6:98545685-98545704 | MsG0680035075.01.T01:three_prime_UTR | 35.0% | |
TACATTGTAGAGACCAAAAG+AGG | - | Chr6:98545658-98545677 | None:intergenic | 35.0% | |
TATTTCAACTCGAGAGCTAA+AGG | - | Chr6:98543303-98543322 | None:intergenic | 35.0% | |
TGGATACTCACCATAAACAA+GGG | - | Chr6:98544390-98544409 | None:intergenic | 35.0% | |
TGTGTTAGTGCTTCAATCAT+AGG | - | Chr6:98545752-98545771 | None:intergenic | 35.0% | |
TTAGGTAAGAAACACAAACC+AGG | - | Chr6:98541767-98541786 | None:intergenic | 35.0% | |
TTGGATACTCACCATAAACA+AGG | - | Chr6:98544391-98544410 | None:intergenic | 35.0% | |
TTGGCTATACAATGTACCAT+GGG | + | Chr6:98545092-98545111 | MsG0680035075.01.T01:CDS | 35.0% | |
TTTAGGAAAAGCAAAAGGGT+AGG | + | Chr6:98543950-98543969 | MsG0680035075.01.T01:intron | 35.0% | |
TTTCCTAAAGGGTTTGTGTT+TGG | + | Chr6:98541656-98541675 | MsG0680035075.01.T01:CDS | 35.0% | |
! | AATGATTTGTATAAGCCCCA+TGG | - | Chr6:98545111-98545130 | None:intergenic | 35.0% |
! | ATCAATCGGATTGGAATGTA+GGG | + | Chr6:98544564-98544583 | MsG0680035075.01.T01:intron | 35.0% |
! | ATTCTTTTGAACACCTTCCA+GGG | - | Chr6:98543590-98543609 | None:intergenic | 35.0% |
! | ATTGGACAGGAAAGATTTTG+CGG | + | Chr6:98543455-98543474 | MsG0680035075.01.T01:intron | 35.0% |
! | CACCAAACCAAAAAGTATGT+TGG | + | Chr6:98541943-98541962 | MsG0680035075.01.T01:intron | 35.0% |
! | CTTTATGGCCGTAATTTTAC+AGG | + | Chr6:98543366-98543385 | MsG0680035075.01.T01:intron | 35.0% |
! | GGGTAATGTAACATTTTCCA+AGG | + | Chr6:98545323-98545342 | MsG0680035075.01.T01:CDS | 35.0% |
! | TATCAATCGGATTGGAATGT+AGG | + | Chr6:98544563-98544582 | MsG0680035075.01.T01:intron | 35.0% |
! | TATTCTTTTGAACACCTTCC+AGG | - | Chr6:98543591-98543610 | None:intergenic | 35.0% |
! | TTATCTTGTGGTGATGATTG+TGG | + | Chr6:98543924-98543943 | MsG0680035075.01.T01:intron | 35.0% |
! | TTCATTCATCCCCTTGTTTA+TGG | + | Chr6:98544377-98544396 | MsG0680035075.01.T01:CDS | 35.0% |
! | TTTGGATAAAAGGCCTCTTT+TGG | + | Chr6:98545642-98545661 | MsG0680035075.01.T01:three_prime_UTR | 35.0% |
!! | CTTTTCAGGCATATTCATCT+TGG | + | Chr6:98545073-98545092 | MsG0680035075.01.T01:intron | 35.0% |
!! | GGAAGGTGTTCAAAAGAATA+TGG | + | Chr6:98543591-98543610 | MsG0680035075.01.T01:CDS | 35.0% |
!!! | ACTTTTGGTTTTGCTTGATG+AGG | - | Chr6:98544536-98544555 | None:intergenic | 35.0% |
!!! | GGTGATGATTGTGGTTTTTT+AGG | + | Chr6:98543933-98543952 | MsG0680035075.01.T01:intron | 35.0% |
AAAAGTCCCTGGCTATCAAT+CGG | + | Chr6:98544550-98544569 | MsG0680035075.01.T01:CDS | 40.0% | |
AAACTTACTCTTGGTCCAAC+AGG | - | Chr6:98544946-98544965 | None:intergenic | 40.0% | |
AACTTTGATGCAGATGGAAC+TGG | + | Chr6:98543072-98543091 | MsG0680035075.01.T01:intron | 40.0% | |
ACTCCAAACACAAACCCTTT+AGG | - | Chr6:98541662-98541681 | None:intergenic | 40.0% | |
ACTTCCTCCTTAGTGAACTT+TGG | - | Chr6:98544446-98544465 | None:intergenic | 40.0% | |
ATGCCTGCAACATAGGTTTA+AGG | - | Chr6:98543246-98543265 | None:intergenic | 40.0% | |
ATTGTCGCAAATAATGGCAC+AGG | + | Chr6:98542634-98542653 | MsG0680035075.01.T01:CDS | 40.0% | |
CCAATATGCAGACATCTTAG+GGG | - | Chr6:98545535-98545554 | None:intergenic | 40.0% | |
CTTCCTCCTTAGTGAACTTT+GGG | - | Chr6:98544445-98544464 | None:intergenic | 40.0% | |
CTTGGCTATACAATGTACCA+TGG | + | Chr6:98545091-98545110 | MsG0680035075.01.T01:CDS | 40.0% | |
GAAAAGCAAAAGGGTAGGAT+TGG | + | Chr6:98543955-98543974 | MsG0680035075.01.T01:CDS | 40.0% | |
GAAACAGTGCATTTGGATAC+TGG | + | Chr6:98541614-98541633 | MsG0680035075.01.T01:CDS | 40.0% | |
GAGCTAAAGGAAGGTCATAA+TGG | - | Chr6:98543290-98543309 | None:intergenic | 40.0% | |
GAGGAAGTGAATCTTGTGAA+GGG | + | Chr6:98544458-98544477 | MsG0680035075.01.T01:CDS | 40.0% | |
GATCGATTACTTGCTCGAAA+AGG | + | Chr6:98543134-98543153 | MsG0680035075.01.T01:CDS | 40.0% | |
GCAGGAAGATATAGATCTCA+TGG | + | Chr6:98542910-98542929 | MsG0680035075.01.T01:intron | 40.0% | |
GGATACTCACCATAAACAAG+GGG | - | Chr6:98544389-98544408 | None:intergenic | 40.0% | |
GTATCCAAATGCACTGTTTC+AGG | - | Chr6:98541614-98541633 | None:intergenic | 40.0% | |
GTTCCTTAAACCTATGTTGC+AGG | + | Chr6:98543240-98543259 | MsG0680035075.01.T01:intron | 40.0% | |
GTTTGTGTCACAGTTATGTC+TGG | - | Chr6:98545779-98545798 | None:intergenic | 40.0% | |
TCAGCCTTTGATCTTGTAAG+AGG | - | Chr6:98544009-98544028 | None:intergenic | 40.0% | |
TGAGCCTCTTACAAGATCAA+AGG | + | Chr6:98544002-98544021 | MsG0680035075.01.T01:CDS | 40.0% | |
TGCTTATCAAGTAGAGGGTA+TGG | + | Chr6:98541691-98541710 | MsG0680035075.01.T01:CDS | 40.0% | |
TGGCTATACAATGTACCATG+GGG | + | Chr6:98545093-98545112 | MsG0680035075.01.T01:CDS | 40.0% | |
TTAGGGTACACATCAAGGTT+TGG | + | Chr6:98545474-98545493 | MsG0680035075.01.T01:CDS | 40.0% | |
TTTGTAGGTATGGATGATCC+GGG | + | Chr6:98545303-98545322 | MsG0680035075.01.T01:intron | 40.0% | |
! | AGTCTCTTTTTCCGACAAAC+AGG | - | Chr6:98542396-98542415 | None:intergenic | 40.0% |
! | GATTTTCATCATGCACCAAG+TGG | + | Chr6:98543877-98543896 | MsG0680035075.01.T01:intron | 40.0% |
! | GGGTAGGATTGGAATTTTGT+TGG | + | Chr6:98543966-98543985 | MsG0680035075.01.T01:CDS | 40.0% |
! | GTCTTTGAAGATGGTGATGT+TGG | + | Chr6:98541505-98541524 | MsG0680035075.01.T01:exon | 40.0% |
! | TTCTTTTGAACACCTTCCAG+GGG | - | Chr6:98543589-98543608 | None:intergenic | 40.0% |
!! | AATACCGGTTCTCAATCTCA+TGG | + | Chr6:98542951-98542970 | MsG0680035075.01.T01:CDS | 40.0% |
!! | GATGATGGAGCAAATGTGTT+TGG | + | Chr6:98545411-98545430 | MsG0680035075.01.T01:CDS | 40.0% |
!! | GCTCTCGAGTTGAAATACAA+CGG | + | Chr6:98543306-98543325 | MsG0680035075.01.T01:CDS | 40.0% |
!!! | AAGGGCTCCATTGATTTTGT+TGG | + | Chr6:98544476-98544495 | MsG0680035075.01.T01:CDS | 40.0% |
ACAGTGCATTTGGATACTGG+AGG | + | Chr6:98541617-98541636 | MsG0680035075.01.T01:CDS | 45.0% | |
ACTCCCAAAGTTCACTAAGG+AGG | + | Chr6:98544439-98544458 | MsG0680035075.01.T01:CDS | 45.0% | |
AGGAGTAATGCCTGCAACAT+AGG | - | Chr6:98543253-98543272 | None:intergenic | 45.0% | |
AGTGCCTGAAACAGTGCATT+TGG | + | Chr6:98541607-98541626 | MsG0680035075.01.T01:CDS | 45.0% | |
ATGGAGACAGAGTGAAGAAC+TGG | + | Chr6:98543505-98543524 | MsG0680035075.01.T01:CDS | 45.0% | |
CAAGCAAAACCAAAAGTCCC+TGG | + | Chr6:98544539-98544558 | MsG0680035075.01.T01:CDS | 45.0% | |
CAGACTCCCAAAGTTCACTA+AGG | + | Chr6:98544436-98544455 | MsG0680035075.01.T01:CDS | 45.0% | |
CAGTGCATTTGGATACTGGA+GGG | + | Chr6:98541618-98541637 | MsG0680035075.01.T01:CDS | 45.0% | |
CCCCTAAGATGTCTGCATAT+TGG | + | Chr6:98545532-98545551 | MsG0680035075.01.T01:CDS | 45.0% | |
GCGTTGTTCTTCGTGTACAA+CGG | + | Chr6:98544109-98544128 | MsG0680035075.01.T01:intron | 45.0% | |
GCTGCTCTTGGCTATGATAA+TGG | + | Chr6:98543555-98543574 | MsG0680035075.01.T01:CDS | 45.0% | |
GGAGATTAGGGTACACATCA+AGG | + | Chr6:98545469-98545488 | MsG0680035075.01.T01:CDS | 45.0% | |
GGAGGAAGTGAATCTTGTGA+AGG | + | Chr6:98544457-98544476 | MsG0680035075.01.T01:CDS | 45.0% | |
TCAACTCGAGAGCTAAAGGA+AGG | - | Chr6:98543299-98543318 | None:intergenic | 45.0% | |
TGGACCATGAGATTGAGAAC+CGG | - | Chr6:98542958-98542977 | None:intergenic | 45.0% | |
TGTTGTGTCATGCAAACCCT+TGG | - | Chr6:98545343-98545362 | None:intergenic | 45.0% | |
! | GATTTGGTCTGCCTGTTTGT+CGG | + | Chr6:98542382-98542401 | MsG0680035075.01.T01:intron | 45.0% |
! | TCCAATCCGATTGATAGCCA+GGG | - | Chr6:98544559-98544578 | None:intergenic | 45.0% |
! | TTCCAATCCGATTGATAGCC+AGG | - | Chr6:98544560-98544579 | None:intergenic | 45.0% |
!! | GATTGATAGCCAGGGACTTT+TGG | - | Chr6:98544551-98544570 | None:intergenic | 45.0% |
!!! | GATAATGGCTTTTTTGCCCC+TGG | + | Chr6:98543570-98543589 | MsG0680035075.01.T01:CDS | 45.0% |
!! | TATCAAATAATAATTTAAAA+AGG | + | Chr6:98542196-98542215 | MsG0680035075.01.T01:intron | 5.0% |
!!! | TTTTTTTACAATAATTTTTT+TGG | + | Chr6:98542549-98542568 | MsG0680035075.01.T01:intron | 5.0% |
ACACGACACGTGTCTAACAC+AGG | - | Chr6:98544190-98544209 | None:intergenic | 50.0% | |
CAAGGGGATGAATGAACCTG+TGG | - | Chr6:98544373-98544392 | None:intergenic | 50.0% | |
CCAAGAGCAGCAACAACTCT+TGG | - | Chr6:98543546-98543565 | None:intergenic | 50.0% | |
CCAAGAGTTGTTGCTGCTCT+TGG | + | Chr6:98543543-98543562 | MsG0680035075.01.T01:CDS | 50.0% | |
GTCAGTGTTTGTGTCGTGTC+CGG | + | Chr6:98544287-98544306 | MsG0680035075.01.T01:intron | 50.0% | |
GTGTGTGTGTGTGTGTGTGT+GGG | + | Chr6:98542846-98542865 | MsG0680035075.01.T01:intron | 50.0% | |
TATGATGCACGGACACTCCT+CGG | + | Chr6:98544152-98544171 | MsG0680035075.01.T01:intron | 50.0% | |
TCCCTGGCTATCAATCGGAT+TGG | + | Chr6:98544555-98544574 | MsG0680035075.01.T01:CDS | 50.0% | |
TGAAGCACGGACATGAACAC+CGG | - | Chr6:98544309-98544328 | None:intergenic | 50.0% | |
TGTGTGTGTGTGTGTGTGTG+GGG | + | Chr6:98542845-98542864 | MsG0680035075.01.T01:intron | 50.0% | |
TGTGTGTGTGTGTGTGTGTG+TGG | + | Chr6:98542845-98542864 | MsG0680035075.01.T01:intron | 50.0% | |
! | AGAGGGTATGGCTAGCAAAG+AGG | + | Chr6:98541703-98541722 | MsG0680035075.01.T01:CDS | 50.0% |
! | GAGGGTATGGCTAGCAAAGA+GGG | + | Chr6:98541704-98541723 | MsG0680035075.01.T01:CDS | 50.0% |
! | GCTAAGAATGGAGTGCCTGT+TGG | + | Chr6:98544928-98544947 | MsG0680035075.01.T01:intron | 50.0% |
!!! | ATGGCTTTTTTGCCCCTGGA+AGG | + | Chr6:98543574-98543593 | MsG0680035075.01.T01:CDS | 50.0% |
AGGGTCGTGGCCCTAGTATT+TGG | + | Chr6:98541723-98541742 | MsG0680035075.01.T01:CDS | 55.0% | |
ATGGCTAGCAAAGAGGGTCG+TGG | + | Chr6:98541710-98541729 | MsG0680035075.01.T01:CDS | 55.0% | |
GGGTCGTGGCCCTAGTATTT+GGG | + | Chr6:98541724-98541743 | MsG0680035075.01.T01:CDS | 55.0% | |
GTGTGTGTGTGTGTGTGTGG+GGG | + | Chr6:98542852-98542871 | MsG0680035075.01.T01:intron | 55.0% | |
TGTGTGTGTGTGTGTGTGGG+GGG | + | Chr6:98542853-98542872 | MsG0680035075.01.T01:intron | 55.0% | |
! | ACAGGAGCACACCTAATCCG+AGG | - | Chr6:98544172-98544191 | None:intergenic | 55.0% |
GCACGGACACTCCTCGGATT+AGG | + | Chr6:98544158-98544177 | MsG0680035075.01.T01:intron | 60.0% | |
GTGTGTGTGTGTGTGTGGGG+GGG | + | Chr6:98542854-98542873 | MsG0680035075.01.T01:intron | 60.0% | |
TGTGTGTGTGTGTGTGGGGG+GGG | + | Chr6:98542855-98542874 | MsG0680035075.01.T01:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 98541462 | 98545817 | 98541462 | ID=MsG0680035075.01;Name=MsG0680035075.01 |
Chr6 | mRNA | 98541462 | 98545817 | 98541462 | ID=MsG0680035075.01.T01;Parent=MsG0680035075.01;Name=MsG0680035075.01.T01;_AED=0.30;_eAED=0.30;_QI=53|0.88|0.9|1|1|1|10|233|499 |
Chr6 | exon | 98541462 | 98541767 | 98541462 | ID=MsG0680035075.01.T01:exon:7620;Parent=MsG0680035075.01.T01 |
Chr6 | exon | 98542632 | 98542690 | 98542632 | ID=MsG0680035075.01.T01:exon:7621;Parent=MsG0680035075.01.T01 |
Chr6 | exon | 98542914 | 98542989 | 98542914 | ID=MsG0680035075.01.T01:exon:7622;Parent=MsG0680035075.01.T01 |
Chr6 | exon | 98543085 | 98543156 | 98543085 | ID=MsG0680035075.01.T01:exon:7623;Parent=MsG0680035075.01.T01 |
Chr6 | exon | 98543262 | 98543349 | 98543262 | ID=MsG0680035075.01.T01:exon:7624;Parent=MsG0680035075.01.T01 |
Chr6 | exon | 98543464 | 98543716 | 98543464 | ID=MsG0680035075.01.T01:exon:7625;Parent=MsG0680035075.01.T01 |
Chr6 | exon | 98543955 | 98544070 | 98543955 | ID=MsG0680035075.01.T01:exon:7626;Parent=MsG0680035075.01.T01 |
Chr6 | exon | 98544376 | 98544580 | 98544376 | ID=MsG0680035075.01.T01:exon:7627;Parent=MsG0680035075.01.T01 |
Chr6 | exon | 98545081 | 98545183 | 98545081 | ID=MsG0680035075.01.T01:exon:7628;Parent=MsG0680035075.01.T01 |
Chr6 | exon | 98545310 | 98545817 | 98545310 | ID=MsG0680035075.01.T01:exon:7629;Parent=MsG0680035075.01.T01 |
Chr6 | five_prime_UTR | 98541462 | 98541514 | 98541462 | ID=MsG0680035075.01.T01:five_prime_utr;Parent=MsG0680035075.01.T01 |
Chr6 | CDS | 98541515 | 98541767 | 98541515 | ID=MsG0680035075.01.T01:cds;Parent=MsG0680035075.01.T01 |
Chr6 | CDS | 98542632 | 98542690 | 98542632 | ID=MsG0680035075.01.T01:cds;Parent=MsG0680035075.01.T01 |
Chr6 | CDS | 98542914 | 98542989 | 98542914 | ID=MsG0680035075.01.T01:cds;Parent=MsG0680035075.01.T01 |
Chr6 | CDS | 98543085 | 98543156 | 98543085 | ID=MsG0680035075.01.T01:cds;Parent=MsG0680035075.01.T01 |
Chr6 | CDS | 98543262 | 98543349 | 98543262 | ID=MsG0680035075.01.T01:cds;Parent=MsG0680035075.01.T01 |
Chr6 | CDS | 98543464 | 98543716 | 98543464 | ID=MsG0680035075.01.T01:cds;Parent=MsG0680035075.01.T01 |
Chr6 | CDS | 98543955 | 98544070 | 98543955 | ID=MsG0680035075.01.T01:cds;Parent=MsG0680035075.01.T01 |
Chr6 | CDS | 98544376 | 98544580 | 98544376 | ID=MsG0680035075.01.T01:cds;Parent=MsG0680035075.01.T01 |
Chr6 | CDS | 98545081 | 98545183 | 98545081 | ID=MsG0680035075.01.T01:cds;Parent=MsG0680035075.01.T01 |
Chr6 | CDS | 98545310 | 98545584 | 98545310 | ID=MsG0680035075.01.T01:cds;Parent=MsG0680035075.01.T01 |
Chr6 | three_prime_UTR | 98545585 | 98545817 | 98545585 | ID=MsG0680035075.01.T01:three_prime_utr;Parent=MsG0680035075.01.T01 |
Gene Sequence |
Protein sequence |