AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004176.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004176.01.T01 MTR_1g076550 71.008 238 12 3 1 238 1 181 2.20e-111 317
MsG0180004176.01.T01 MTR_5g034130 38.235 238 90 4 1 238 1 181 1.68e-48 158
MsG0180004176.01.T01 MTR_5g034125 38.235 238 90 4 1 238 1 181 1.68e-48 158
MsG0180004176.01.T01 MTR_6g005820 38.235 238 90 4 1 238 1 181 1.89e-48 157
MsG0180004176.01.T01 MTR_1g086480 38.235 238 90 4 1 238 1 181 1.94e-48 157
MsG0180004176.01.T01 MTR_7g109960 37.815 238 91 4 1 238 1 181 5.79e-48 156
MsG0180004176.01.T01 MTR_5g016540 37.131 237 92 4 1 237 1 180 1.57e-46 153
MsG0180004176.01.T01 MTR_4g077640 37.662 231 87 3 1 231 1 174 6.77e-46 152
MsG0180004176.01.T01 MTR_5g007810 36.364 231 90 4 1 231 1 174 8.37e-43 144
MsG0180004176.01.T01 MTR_4g128910 35.065 231 93 3 1 231 1 174 4.68e-42 141
MsG0180004176.01.T01 MTR_5g007820 34.310 239 98 5 1 237 1 182 2.60e-37 129
MsG0180004176.01.T01 MTR_8g077540 40.171 117 69 1 122 237 64 180 3.03e-25 98.2
MsG0180004176.01.T01 MTR_8g077540 40.171 117 69 1 122 237 90 206 5.05e-25 98.6
MsG0180004176.01.T01 MTR_5g007840 30.802 237 128 7 1 237 1 201 3.44e-24 96.3
MsG0180004176.01.T01 MTR_2g022200 30.303 231 109 6 1 230 1 180 1.09e-22 92.0
MsG0180004176.01.T01 MTR_5g078090 40.909 88 52 0 122 209 68 155 2.45e-17 77.4
MsG0180004176.01.T01 MTR_5g015370 37.500 88 55 0 122 209 68 155 4.09e-14 68.9
MsG0180004176.01.T01 MTR_4g026950 35.227 88 57 0 122 209 49 136 2.58e-13 66.2
MsG0180004176.01.T01 MTR_1g076590 67.500 40 13 0 179 218 8 47 6.06e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004176.01.T01 AT3G22950 63.445 238 30 3 1 238 1 181 1.96e-98 285
MsG0180004176.01.T01 AT3G22950 63.445 238 30 3 1 238 1 181 1.96e-98 285
MsG0180004176.01.T01 AT1G70490 38.655 238 89 4 1 238 1 181 3.10e-49 160
MsG0180004176.01.T01 AT1G70490 38.655 238 89 4 1 238 1 181 3.10e-49 160
MsG0180004176.01.T01 AT1G70490 38.655 238 89 4 1 238 1 181 3.10e-49 160
MsG0180004176.01.T01 AT1G70490 38.655 238 89 4 1 238 1 181 3.10e-49 160
MsG0180004176.01.T01 AT1G70490 38.655 238 89 4 1 238 1 181 3.10e-49 160
MsG0180004176.01.T01 AT1G70490 38.655 238 89 4 1 238 1 181 3.10e-49 160
MsG0180004176.01.T01 AT1G23490 38.655 238 89 4 1 238 1 181 3.10e-49 160
MsG0180004176.01.T01 AT1G70490 38.655 238 89 4 1 238 1 181 3.10e-49 160
MsG0180004176.01.T01 AT1G10630 38.235 238 90 4 1 238 1 181 2.57e-48 157
MsG0180004176.01.T01 AT1G10630 38.235 238 90 4 1 238 1 181 2.57e-48 157
MsG0180004176.01.T01 AT3G62290 38.235 238 90 4 1 238 1 181 3.93e-48 157
MsG0180004176.01.T01 AT3G62290 38.235 238 90 4 1 238 1 181 3.93e-48 157
MsG0180004176.01.T01 AT3G62290 38.235 238 90 4 1 238 1 181 3.93e-48 157
MsG0180004176.01.T01 AT2G47170 38.235 238 90 4 1 238 1 181 4.62e-48 157
MsG0180004176.01.T01 AT2G47170 38.235 238 90 4 1 238 1 181 4.62e-48 157
MsG0180004176.01.T01 AT2G47170 38.235 238 90 4 1 238 1 181 4.62e-48 157
MsG0180004176.01.T01 AT5G14670 38.235 238 90 4 1 238 1 181 4.67e-48 157
MsG0180004176.01.T01 AT5G14670 38.235 238 90 4 1 238 1 181 4.67e-48 157
MsG0180004176.01.T01 AT5G14670 37.815 238 91 4 1 238 1 181 1.47e-47 155
MsG0180004176.01.T01 AT3G03120 36.797 231 89 3 1 231 1 174 1.30e-44 148
MsG0180004176.01.T01 AT2G24765 35.931 231 91 3 1 231 1 174 4.80e-42 141
MsG0180004176.01.T01 AT5G17060 48.182 110 57 0 122 231 65 174 4.68e-33 119
MsG0180004176.01.T01 AT5G17060 50.794 63 31 0 1 63 1 63 5.21e-15 71.2
MsG0180004176.01.T01 AT5G17060 48.182 110 57 0 122 231 65 174 4.68e-33 119
MsG0180004176.01.T01 AT5G17060 50.794 63 31 0 1 63 1 63 5.21e-15 71.2
MsG0180004176.01.T01 AT2G15310 44.828 116 64 0 122 237 65 180 1.09e-32 118
MsG0180004176.01.T01 AT2G15310 55.556 63 28 0 1 63 1 63 7.05e-15 71.2
MsG0180004176.01.T01 AT2G24765 34.595 185 64 3 1 185 1 128 2.52e-26 99.8
MsG0180004176.01.T01 AT2G18390 41.880 117 67 1 122 237 64 180 7.67e-26 100
MsG0180004176.01.T01 AT3G03120 34.225 187 66 3 1 187 1 130 1.19e-25 98.2
MsG0180004176.01.T01 AT5G52210 29.741 232 113 6 1 232 1 182 1.04e-23 94.7
MsG0180004176.01.T01 AT5G52210 29.741 232 113 6 1 232 1 182 1.04e-23 94.7
MsG0180004176.01.T01 AT1G02440 27.273 242 105 7 1 230 1 183 2.14e-22 90.9
MsG0180004176.01.T01 AT5G37680 34.862 109 68 1 122 227 21 129 1.44e-16 74.3
MsG0180004176.01.T01 AT5G37680 38.636 88 54 0 122 209 68 155 4.77e-16 73.9
MsG0180004176.01.T01 AT1G02430 35.294 119 64 4 123 230 67 183 8.88e-16 73.6
MsG0180004176.01.T01 AT3G49870 37.500 88 55 0 122 209 49 136 3.71e-14 68.6
MsG0180004176.01.T01 AT5G67560 37.500 88 55 0 122 209 68 155 5.15e-14 68.6
MsG0180004176.01.T01 AT3G49870 37.500 88 55 0 122 209 68 155 5.70e-14 68.6
MsG0180004176.01.T01 AT3G49860 34.091 88 58 0 122 209 60 147 1.41e-12 64.3

Find 80 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTAATTATTAATTAATT+TGG 0.065801 1:+74481604 MsG0180004176.01.T01:five_prime_UTR
GATAGTTGTAGTTGATTAAA+AGG 0.099548 1:+74481633 MsG0180004176.01.T01:five_prime_UTR
CCGATTTGATTTGGCGATTT+GGG 0.232061 1:-74481381 None:intergenic
GGCTTCTTTCTATAACAATT+TGG 0.253823 1:-74487239 None:intergenic
CACAAAGAGAATTGAGTATT+TGG 0.257469 1:+74484615 MsG0180004176.01.T01:CDS
ACCGATTTGATTTGGCGATT+TGG 0.267331 1:-74481382 None:intergenic
ATTCTCTTTGTGATAGTCAT+TGG 0.315670 1:-74484604 None:intergenic
TCATTTCAGGTCTGGGATCT+TGG 0.315908 1:+74486701 MsG0180004176.01.T01:intron
AATTAATTATTAATTAATTT+GGG 0.319901 1:+74481605 MsG0180004176.01.T01:five_prime_UTR
GAAATTAATGCTTTGAAAAT+CGG 0.322803 1:-74485960 None:intergenic
GAATGAACACCGATTTGATT+TGG 0.333185 1:-74481390 None:intergenic
AGCTTCAGTGGTTTGATCTC+TGG 0.346318 1:+74485936 MsG0180004176.01.T01:CDS
GATGGTCTTGGATGGATTGC+CGG 0.370902 1:+74487019 MsG0180004176.01.T01:CDS
GAGTATAAGATTGTTGTTGT+TGG 0.394215 1:+74481708 MsG0180004176.01.T01:CDS
ACTCTTTATAAATTGCATCT+TGG 0.394363 1:+74481756 MsG0180004176.01.T01:CDS
TGGATTGCCGGGCGAGTAAC+CGG 0.406341 1:+74487031 MsG0180004176.01.T01:CDS
TGCTTTGCCGGTTACTCGCC+CGG 0.406522 1:-74487038 None:intergenic
GTTGCGATTGCGAAGAGAAT+TGG 0.416440 1:-74481412 None:intergenic
ACAATCTTATACTCTTTAGC+AGG 0.426577 1:-74481699 None:intergenic
GACGGCCTTTATGATGGTCT+TGG 0.432233 1:+74487007 MsG0180004176.01.T01:CDS
CAAGCTTGCAGCGCCCTCTC+AGG 0.432795 1:+74486983 MsG0180004176.01.T01:CDS
AAACCCACATCATGCTTTGC+CGG 0.443216 1:-74487050 None:intergenic
GGGCAATGATGTCTAGATTC+TGG 0.443324 1:+74481664 MsG0180004176.01.T01:CDS
TAAGATTGTTGTTGTTGGAT+TGG 0.448953 1:+74481713 MsG0180004176.01.T01:CDS
ATCCTTCATTAAAGAGATCC+TGG 0.463726 1:-74486810 None:intergenic
ATAGTTGTAGTTGATTAAAA+GGG 0.463809 1:+74481634 MsG0180004176.01.T01:five_prime_UTR
TCCATCCAAGACCATCATAA+AGG 0.464813 1:-74487012 None:intergenic
AAAGCATGATGTGGGTTTGC+TGG 0.470420 1:+74487055 MsG0180004176.01.T01:exon
GAGACCCTTTGATATACCTC+AGG 0.476435 1:+74484564 MsG0180004176.01.T01:CDS
TGCTAATAAACAAGATATCA+AGG 0.484675 1:+74486889 MsG0180004176.01.T01:CDS
CCCAAATCGCCAAATCAAAT+CGG 0.492653 1:+74481381 MsG0180004176.01.T01:five_prime_UTR
GCCTTTATGATGGTCTTGGA+TGG 0.493098 1:+74487011 MsG0180004176.01.T01:CDS
ACCCTTTGTCATCATTGTTG+TGG 0.495739 1:-74484639 None:intergenic
TAGTTGATTAAAAGGGAGGA+TGG 0.496304 1:+74481641 MsG0180004176.01.T01:exon
AATATGTTGCCCATGATGTC+CGG 0.496677 1:-74486739 None:intergenic
AAGAAAGACTCCGGACATCA+TGG 0.503977 1:+74486729 MsG0180004176.01.T01:CDS
GTTGATTAAAAGGGAGGATG+GGG 0.505474 1:+74481643 MsG0180004176.01.T01:exon
ACAGCATCAAGGATCATGAT+TGG 0.511844 1:+74486954 MsG0180004176.01.T01:CDS
TTTCAGGTCTGGGATCTTGG+CGG 0.512294 1:+74486704 MsG0180004176.01.T01:intron
ATGGTCTTGGATGGATTGCC+GGG 0.515323 1:+74487020 MsG0180004176.01.T01:CDS
AATTCATACACACACTAGCC+TGG 0.526989 1:-74487166 None:intergenic
AGAGCATCAGTGATTTCAGC+AGG 0.529085 1:-74486923 None:intergenic
TCAGGAGACGGCCTTTATGA+TGG 0.533539 1:+74487001 MsG0180004176.01.T01:CDS
GGTATATCAAAGGGTCTCAA+AGG 0.535916 1:-74484559 None:intergenic
CACAGACAACGCTACCTCCC+AGG 0.538657 1:+74481434 MsG0180004176.01.T01:five_prime_UTR
TGCAGCGCCCTCTCAGGAGA+CGG 0.539815 1:+74486989 MsG0180004176.01.T01:CDS
TTATAAATTGCATCTTGGTG+AGG 0.541529 1:+74481761 MsG0180004176.01.T01:CDS
AGCCAGGATCTCTTTAATGA+AGG 0.547926 1:+74486808 MsG0180004176.01.T01:CDS
GTTGTAGTTGATTAAAAGGG+AGG 0.548123 1:+74481637 MsG0180004176.01.T01:five_prime_UTR
TCGACGTTGCTACCAACAGT+AGG 0.548630 1:-74481798 None:intergenic
TGTGGGTTTGCTGGAAACTA+AGG 0.552981 1:+74487064 MsG0180004176.01.T01:three_prime_UTR
AGTTGATTAAAAGGGAGGAT+GGG 0.553148 1:+74481642 MsG0180004176.01.T01:exon
GTATATCAAAGGGTCTCAAA+GGG 0.554769 1:-74484558 None:intergenic
TTGACAGCAGTGATAGAGCC+AGG 0.555022 1:+74486792 MsG0180004176.01.T01:CDS
GAATCCTGAGGTATATCAAA+GGG 0.556143 1:-74484568 None:intergenic
CATAAAGGCCGTCTCCTGAG+AGG 0.561891 1:-74486997 None:intergenic
TCCACAACAATGATGACAAA+GGG 0.562921 1:+74484638 MsG0180004176.01.T01:CDS
CTTGTTTATTAGCAAAGACA+AGG 0.566607 1:-74486880 None:intergenic
ATATTTCAAAGAATCAAGCC+AGG 0.572391 1:+74487148 MsG0180004176.01.T01:three_prime_UTR
TCAAAGGGTCTCAAAGGGAA+AGG 0.574343 1:-74484553 None:intergenic
CAATTACAGCATGAGTTCCT+CGG 0.575990 1:-74486763 None:intergenic
TCTGTCACTTCACAGCATCA+AGG 0.579384 1:+74486943 MsG0180004176.01.T01:CDS
AAGATGCAATTTATAAAGAG+TGG 0.580200 1:-74481754 None:intergenic
TTGATTAAAAGGGAGGATGG+GGG 0.584384 1:+74481644 MsG0180004176.01.T01:exon
TCATGATCCAGAAGCTTCAG+TGG 0.588675 1:+74485924 MsG0180004176.01.T01:intron
AGAAAGACTCCGGACATCAT+GGG 0.590125 1:+74486730 MsG0180004176.01.T01:CDS
ATAAAGGCCGTCTCCTGAGA+GGG 0.592089 1:-74486996 None:intergenic
TGAATCCTGAGGTATATCAA+AGG 0.594548 1:-74484569 None:intergenic
CGACGTTGCTACCAACAGTA+GGG 0.595721 1:-74481797 None:intergenic
GTTACTACTAACCCTACTGT+TGG 0.624128 1:+74481786 MsG0180004176.01.T01:CDS
TTGGCGGACAAGAAAGACTC+CGG 0.636413 1:+74486720 MsG0180004176.01.T01:CDS
TAACCGGCAAAGCATGATGT+GGG 0.639528 1:+74487047 MsG0180004176.01.T01:exon
GTCCACAACAATGATGACAA+AGG 0.643267 1:+74484637 MsG0180004176.01.T01:CDS
CAATCTTATACTCTTTAGCA+GGG 0.643634 1:-74481698 None:intergenic
GTAACCGGCAAAGCATGATG+TGG 0.646220 1:+74487046 MsG0180004176.01.T01:exon
CCAAGGTGCATGCAATGCAG+AGG 0.647435 1:-74487260 None:intergenic
GTTGTTGGATTGGATAACGC+TGG 0.661294 1:+74481723 MsG0180004176.01.T01:CDS
ATGCAATAGCTTGAATCCTG+AGG 0.676977 1:-74484580 None:intergenic
AGAAAAGGATCGAACCTGGG+AGG 0.724445 1:-74481448 None:intergenic
TCATGGGCAACATATTACCG+AGG 0.738917 1:+74486746 MsG0180004176.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTATTAATTAATTT+GGG + Chr1:74481605-74481624 MsG0180004176.01.T01:five_prime_UTR 0.0%
!! TAATTAATTATTAATTAATT+TGG + Chr1:74481604-74481623 MsG0180004176.01.T01:five_prime_UTR 0.0%
!!! GTTTAATTTAATTGATATAA+TGG - Chr1:74483931-74483950 None:intergenic 10.0%
!! AAATTGTACTTAGAATTTAT+AGG - Chr1:74483206-74483225 None:intergenic 15.0%
!! AAGAAAATAGAAGATTAAAT+GGG + Chr1:74483096-74483115 MsG0180004176.01.T01:intron 15.0%
!! AATTTACTATAGTAGTAAAA+TGG - Chr1:74485014-74485033 None:intergenic 15.0%
!! ACATAAGTTAAAAGAAAAAT+TGG + Chr1:74482063-74482082 MsG0180004176.01.T01:intron 15.0%
!! ACATAATCAAATGAATTAAT+CGG - Chr1:74481558-74481577 None:intergenic 15.0%
!! ATATTCATATTTACTTCAAT+AGG + Chr1:74484141-74484160 MsG0180004176.01.T01:intron 15.0%
!! TAAGAAAATAGAAGATTAAA+TGG + Chr1:74483095-74483114 MsG0180004176.01.T01:intron 15.0%
!!! AAAATTTAGGTTGAAAAAAA+TGG - Chr1:74486269-74486288 None:intergenic 15.0%
!! AAAATCATAAAAACAAACTC+TGG + Chr1:74483660-74483679 MsG0180004176.01.T01:intron 20.0%
!! AAAGATTGTTCCTTTATATT+TGG + Chr1:74482126-74482145 MsG0180004176.01.T01:intron 20.0%
!! AATGATTCAACTCAATTAAT+TGG - Chr1:74485554-74485573 None:intergenic 20.0%
!! ACATCTTATGTAAATTCTAA+TGG - Chr1:74483457-74483476 None:intergenic 20.0%
!! ATAGTAAAATGATGATAAAC+TGG - Chr1:74481868-74481887 None:intergenic 20.0%
!! ATAGTTGTAGTTGATTAAAA+GGG + Chr1:74481634-74481653 MsG0180004176.01.T01:five_prime_UTR 20.0%
!! ATGATTCAACTCAATTAATT+GGG - Chr1:74485553-74485572 None:intergenic 20.0%
!! TATAGGATAAATAGTGTTAT+AGG + Chr1:74482186-74482205 MsG0180004176.01.T01:intron 20.0%
!! TATGTCATGATATTAGTATT+AGG + Chr1:74484748-74484767 MsG0180004176.01.T01:intron 20.0%
!! TTAATTTATTTGTTCAACCT+GGG - Chr1:74485443-74485462 None:intergenic 20.0%
!! TTACTACATTTGAACTTATT+TGG - Chr1:74484373-74484392 None:intergenic 20.0%
!!! AATTTTGTTAGGAAAAAATG+TGG - Chr1:74485251-74485270 None:intergenic 20.0%
!!! ATGTGTTTTTAAACTACATT+TGG + Chr1:74486615-74486634 MsG0180004176.01.T01:intron 20.0%
!!! ATTTTAATTATTTTTCCCCT+TGG - Chr1:74485216-74485235 None:intergenic 20.0%
!!! ATTTTGTTAGGAAAAAATGT+GGG - Chr1:74485250-74485269 None:intergenic 20.0%
!!! GAAATTAATGCTTTGAAAAT+CGG - Chr1:74485963-74485982 None:intergenic 20.0%
!!! GTACCATTTAAATTTTCTTA+GGG + Chr1:74486090-74486109 MsG0180004176.01.T01:intron 20.0%
!!! TTGTTGATCAAATTTTTCAT+TGG + Chr1:74481953-74481972 MsG0180004176.01.T01:intron 20.0%
! AAAATGATGATAAACTGGTA+AGG - Chr1:74481863-74481882 None:intergenic 25.0%
! AAAGAAAGACAACTTTAGAT+TGG - Chr1:74482682-74482701 None:intergenic 25.0%
! AAATGATGATAAACTGGTAA+GGG - Chr1:74481862-74481881 None:intergenic 25.0%
! AAGATGCAATTTATAAAGAG+TGG - Chr1:74481757-74481776 None:intergenic 25.0%
! AAGTAGCGTAATAGATTAAT+TGG - Chr1:74483291-74483310 None:intergenic 25.0%
! AATTAATCTATTACGCTACT+TGG + Chr1:74483290-74483309 MsG0180004176.01.T01:intron 25.0%
! AATTTGATTGCTAGAATAGT+TGG + Chr1:74482644-74482663 MsG0180004176.01.T01:intron 25.0%
! ACCTTATTGATAGAAGTTAA+GGG + Chr1:74482721-74482740 MsG0180004176.01.T01:intron 25.0%
! ACTCTTTATAAATTGCATCT+TGG + Chr1:74481756-74481775 MsG0180004176.01.T01:CDS 25.0%
! ACTGAGTACTAAATTAGAAA+AGG - Chr1:74486564-74486583 None:intergenic 25.0%
! AGTAGCGTAATAGATTAATT+GGG - Chr1:74483290-74483309 None:intergenic 25.0%
! AGTTATTCATGATCATGATA+TGG + Chr1:74484916-74484935 MsG0180004176.01.T01:intron 25.0%
! ATAATAATAAAAATTGGGGG+TGG + Chr1:74481281-74481300 MsG0180004176.01.T01:five_prime_UTR 25.0%
! ATACTATATTTATTCCAACG+TGG - Chr1:74483556-74483575 None:intergenic 25.0%
! ATATCCCAAATTCATGTTAA+TGG - Chr1:74482882-74482901 None:intergenic 25.0%
! ATTAGCAATATTCAGATTCT+AGG + Chr1:74485031-74485050 MsG0180004176.01.T01:intron 25.0%
! CAAATATTAGCGTTCATATT+TGG + Chr1:74482009-74482028 MsG0180004176.01.T01:intron 25.0%
! CTTAATTTATTTGTTCAACC+TGG - Chr1:74485444-74485463 None:intergenic 25.0%
! CTTACCATTAACATGAATTT+GGG + Chr1:74482875-74482894 MsG0180004176.01.T01:intron 25.0%
! GATAGTTGTAGTTGATTAAA+AGG + Chr1:74481633-74481652 MsG0180004176.01.T01:five_prime_UTR 25.0%
! TACTAATATCATGACATATC+AGG - Chr1:74484746-74484765 None:intergenic 25.0%
! TACTGAAGAAATTAAGATCA+AGG + Chr1:74485521-74485540 MsG0180004176.01.T01:intron 25.0%
! TAGCCCTAAGAAAATTTAAA+TGG - Chr1:74486096-74486115 None:intergenic 25.0%
! TGATTCAACTCAATTAATTG+GGG - Chr1:74485552-74485571 None:intergenic 25.0%
! TGCATATTTAAATGCAGATT+GGG - Chr1:74484497-74484516 None:intergenic 25.0%
! TGCTAATAAACAAGATATCA+AGG + Chr1:74486889-74486908 MsG0180004176.01.T01:CDS 25.0%
! TTAAAGTGAGTAGAATTTGT+TGG + Chr1:74485642-74485661 MsG0180004176.01.T01:intron 25.0%
! TTGCATATTTAAATGCAGAT+TGG - Chr1:74484498-74484517 None:intergenic 25.0%
! TTTAAAAACACATGCATACA+TGG - Chr1:74486608-74486627 None:intergenic 25.0%
! TTTACATATTGCATCCAATA+TGG - Chr1:74483696-74483715 None:intergenic 25.0%
!! AAAGATCAGAATTGTTACTT+CGG - Chr1:74484845-74484864 None:intergenic 25.0%
!! ATCACTGTTAAATTTTGCTA+CGG + Chr1:74485469-74485488 MsG0180004176.01.T01:intron 25.0%
!! GGTACCATTTAAATTTTCTT+AGG + Chr1:74486089-74486108 MsG0180004176.01.T01:intron 25.0%
!! TAGATAGTTCTTCTTTTCTT+CGG + Chr1:74481334-74481353 MsG0180004176.01.T01:five_prime_UTR 25.0%
!! TCATGATTTAATTGGTTCAA+CGG - Chr1:74485910-74485929 None:intergenic 25.0%
!! TTTTTACCATTGAACTGTTT+TGG + Chr1:74482566-74482585 MsG0180004176.01.T01:intron 25.0%
!!! AAATATGCTTGATATTTTGG+AGG - Chr1:74484817-74484836 None:intergenic 25.0%
!!! GCTTTTTTCTTAAATAGAGA+AGG - Chr1:74484249-74484268 None:intergenic 25.0%
!!! GTGCTGATTAGAAAAAATTT+AGG - Chr1:74486282-74486301 None:intergenic 25.0%
!!! TCTAAAGTTGTCTTTCTTTT+TGG + Chr1:74482683-74482702 MsG0180004176.01.T01:intron 25.0%
AAAAATGACCACCAAATGTT+TGG - Chr1:74485796-74485815 None:intergenic 30.0%
AAAATGACCACCAAATGTTT+GGG - Chr1:74485795-74485814 None:intergenic 30.0%
AAAATGCACATCTCCATATT+AGG - Chr1:74482778-74482797 None:intergenic 30.0%
AAATGCACATCTCCATATTA+GGG - Chr1:74482777-74482796 None:intergenic 30.0%
AACATTGGTAAAAATTGTCC+AGG - Chr1:74485073-74485092 None:intergenic 30.0%
AACTTTGTATAGAAGTTGTG+TGG + Chr1:74482404-74482423 MsG0180004176.01.T01:intron 30.0%
AAGACTAAGAGAAAGTAAAG+AGG - Chr1:74483619-74483638 None:intergenic 30.0%
AATATCATGACATATCAGGA+GGG - Chr1:74484742-74484761 None:intergenic 30.0%
ACAATCTTATACTCTTTAGC+AGG - Chr1:74481702-74481721 None:intergenic 30.0%
ACCACAACAACCAAATATAA+AGG - Chr1:74482139-74482158 None:intergenic 30.0%
ACCCTTAACTTCTATCAATA+AGG - Chr1:74482725-74482744 None:intergenic 30.0%
AGACTAAGAGAAAGTAAAGA+GGG - Chr1:74483618-74483637 None:intergenic 30.0%
AGGATAAATAGTGTTATAGG+CGG + Chr1:74482189-74482208 MsG0180004176.01.T01:intron 30.0%
ATATAATACAGCAAGAGAGT+TGG - Chr1:74483159-74483178 None:intergenic 30.0%
ATATGTAAATGTAAGGCTAC+TGG + Chr1:74483707-74483726 MsG0180004176.01.T01:intron 30.0%
ATATTTCAAAGAATCAAGCC+AGG + Chr1:74487148-74487167 MsG0180004176.01.T01:three_prime_UTR 30.0%
ATGGCAATCTAATATGATTC+AGG - Chr1:74484995-74485014 None:intergenic 30.0%
ATTATGTGATTATTCGCTTC+AGG + Chr1:74481571-74481590 MsG0180004176.01.T01:intron 30.0%
ATTCTCTTTGTGATAGTCAT+TGG - Chr1:74484607-74484626 None:intergenic 30.0%
ATTGATCTGAACCAAAAACA+GGG + Chr1:74483574-74483593 MsG0180004176.01.T01:intron 30.0%
CAATCTTATACTCTTTAGCA+GGG - Chr1:74481701-74481720 None:intergenic 30.0%
CACAAAATTAAAGATGCTGT+GGG - Chr1:74482829-74482848 None:intergenic 30.0%
CACAAAGAGAATTGAGTATT+TGG + Chr1:74484615-74484634 MsG0180004176.01.T01:CDS 30.0%
CACCTTATTGATAGAAGTTA+AGG + Chr1:74482720-74482739 MsG0180004176.01.T01:intron 30.0%
CTCTATTTAAGAAAAAAGCC+TGG + Chr1:74484250-74484269 MsG0180004176.01.T01:intron 30.0%
CTTCTGGATCATGATTTAAT+TGG - Chr1:74485918-74485937 None:intergenic 30.0%
CTTGTTTATTAGCAAAGACA+AGG - Chr1:74486883-74486902 None:intergenic 30.0%
CTTTAAATCACAGCTAAAAC+AGG - Chr1:74485628-74485647 None:intergenic 30.0%
GAGAGAGAATCTAATTTCAT+GGG - Chr1:74484448-74484467 None:intergenic 30.0%
GATTCAACTCAATTAATTGG+GGG - Chr1:74485551-74485570 None:intergenic 30.0%
GCTTACCATTAACATGAATT+TGG + Chr1:74482874-74482893 MsG0180004176.01.T01:intron 30.0%
GCTTAGGCCTTAAAAAAATT+TGG - Chr1:74483796-74483815 None:intergenic 30.0%
GCTTATTGGAATACATTGTT+GGG + Chr1:74486466-74486485 MsG0180004176.01.T01:intron 30.0%
GGATGCAATATGTAAATGTA+AGG + Chr1:74483700-74483719 MsG0180004176.01.T01:intron 30.0%
GGCTTCTTTCTATAACAATT+TGG - Chr1:74487242-74487261 None:intergenic 30.0%
GTGACAAATATAACACATTG+TGG - Chr1:74482521-74482540 None:intergenic 30.0%
TAATATCATGACATATCAGG+AGG - Chr1:74484743-74484762 None:intergenic 30.0%
TAGAAAAGGATAATGCTTAC+TGG - Chr1:74486550-74486569 None:intergenic 30.0%
TAGATGTAAGTCCTTAAAGA+CGG - Chr1:74482467-74482486 None:intergenic 30.0%
TATTGATCTGAACCAAAAAC+AGG + Chr1:74483573-74483592 MsG0180004176.01.T01:intron 30.0%
TCATATTTACTTCAATAGGC+CGG + Chr1:74484145-74484164 MsG0180004176.01.T01:intron 30.0%
TCCTTTATATTTGGTTGTTG+TGG + Chr1:74482135-74482154 MsG0180004176.01.T01:intron 30.0%
TCGAATTTGTCATTCATTTC+AGG + Chr1:74486688-74486707 MsG0180004176.01.T01:intron 30.0%
TGCTTATTGGAATACATTGT+TGG + Chr1:74486465-74486484 MsG0180004176.01.T01:intron 30.0%
TGGCAATCTAATATGATTCA+GGG - Chr1:74484994-74485013 None:intergenic 30.0%
TTATAAATTGCATCTTGGTG+AGG + Chr1:74481761-74481780 MsG0180004176.01.T01:CDS 30.0%
TTGTGCAAAATAGTAAAGCT+AGG - Chr1:74486653-74486672 None:intergenic 30.0%
TTTAAGGACTTACATCTAGA+GGG + Chr1:74482469-74482488 MsG0180004176.01.T01:intron 30.0%
TTTCTAACTAGCTGTTTAGA+TGG - Chr1:74485154-74485173 None:intergenic 30.0%
! AGAAGCCTATTTAGCTTAAA+AGG - Chr1:74484213-74484232 None:intergenic 30.0%
! GAGTATAAGATTGTTGTTGT+TGG + Chr1:74481708-74481727 MsG0180004176.01.T01:CDS 30.0%
! GGGAAATATGCTTGATATTT+TGG - Chr1:74484820-74484839 None:intergenic 30.0%
! GTTGAATCATTGATAGTTGA+AGG + Chr1:74485563-74485582 MsG0180004176.01.T01:intron 30.0%
! TAAGATTGTTGTTGTTGGAT+TGG + Chr1:74481713-74481732 MsG0180004176.01.T01:CDS 30.0%
! TAATATGGAGATGTGCATTT+TGG + Chr1:74482777-74482796 MsG0180004176.01.T01:intron 30.0%
! TAATGAAGGATGAACTTTTC+AGG + Chr1:74486822-74486841 MsG0180004176.01.T01:CDS 30.0%
! TATCAATAAGGTGTTCTCAA+TGG - Chr1:74482713-74482732 None:intergenic 30.0%
! TTTTATGATTTTTCCTCGCA+AGG - Chr1:74483652-74483671 None:intergenic 30.0%
! TTTTTAAACTACATTTGGCG+CGG + Chr1:74486620-74486639 MsG0180004176.01.T01:intron 30.0%
!! GACACTTTCTTTTTGAAGAA+CGG - Chr1:74482499-74482518 None:intergenic 30.0%
!!! ATTTGGTGGTCATTTTTTAG+TGG + Chr1:74485799-74485818 MsG0180004176.01.T01:intron 30.0%
!!! TTAGGGGATATTTTGTTTTG+TGG + Chr1:74485704-74485723 MsG0180004176.01.T01:intron 30.0%
!!! TTCATTGCATTTTTTCAGCT+TGG - Chr1:74485827-74485846 None:intergenic 30.0%
!!! TTGGTTTTACTTTGTTGTCA+GGG + Chr1:74482273-74482292 MsG0180004176.01.T01:intron 30.0%
!!! TTTGGTGGTCATTTTTTAGT+GGG + Chr1:74485800-74485819 MsG0180004176.01.T01:intron 30.0%
AAGAACCAAGATTTGTAGCA+TGG - Chr1:74485361-74485380 None:intergenic 35.0%
AATATGCAACATTATCAGCG+TGG + Chr1:74484509-74484528 MsG0180004176.01.T01:intron 35.0%
ACACTTGAGTGTAAGATCTA+TGG + Chr1:74482246-74482265 MsG0180004176.01.T01:intron 35.0%
ACCAACATCATTTGGATTGA+TGG - Chr1:74482958-74482977 None:intergenic 35.0%
ACCATCAATCCAAATGATGT+TGG + Chr1:74482954-74482973 MsG0180004176.01.T01:intron 35.0%
ACTATAGCAGCAATGAAGAT+TGG - Chr1:74482430-74482449 None:intergenic 35.0%
AGATTGCTACCAACATCATT+TGG - Chr1:74482966-74482985 None:intergenic 35.0%
AGCGTAATAGATTAATTGGG+TGG - Chr1:74483287-74483306 None:intergenic 35.0%
AGGCCTTAAAAAAATTTGGC+AGG - Chr1:74483792-74483811 None:intergenic 35.0%
AGTGGATCAGCAATAAAAGA+TGG + Chr1:74483064-74483083 MsG0180004176.01.T01:intron 35.0%
AGTTGATTAAAAGGGAGGAT+GGG + Chr1:74481642-74481661 MsG0180004176.01.T01:exon 35.0%
ATATCATGACATATCAGGAG+GGG - Chr1:74484741-74484760 None:intergenic 35.0%
ATCCTTCATTAAAGAGATCC+TGG - Chr1:74486813-74486832 None:intergenic 35.0%
ATGATTAGAATCATGAGCAG+TGG + Chr1:74482323-74482342 MsG0180004176.01.T01:intron 35.0%
ATGTAGTAAGATCCATATCC+CGG + Chr1:74484384-74484403 MsG0180004176.01.T01:intron 35.0%
ATTGCTAGATCTAGTGAAAC+CGG - Chr1:74484406-74484425 None:intergenic 35.0%
ATTGTTGTCGTAGTTAGGTT+AGG + Chr1:74485670-74485689 MsG0180004176.01.T01:intron 35.0%
CAGATCGATAGAGAAAGAAA+AGG - Chr1:74481466-74481485 None:intergenic 35.0%
CAGTTCGATCATGAAAACAT+TGG - Chr1:74485088-74485107 None:intergenic 35.0%
CCACAAAATTAAAGATGCTG+TGG - Chr1:74482830-74482849 None:intergenic 35.0%
CCATGAGAAGATTGTTTATG+AGG - Chr1:74483495-74483514 None:intergenic 35.0%
CCTCAAGAAAATATTCTCCA+AGG - Chr1:74482914-74482933 None:intergenic 35.0%
CCTCATAAACAATCTTCTCA+TGG + Chr1:74483492-74483511 MsG0180004176.01.T01:intron 35.0%
CTAAAAAGTAAGCCTATGAC+AGG - Chr1:74483830-74483849 None:intergenic 35.0%
GAACGCTAATATTTGCTTGA+GGG - Chr1:74482004-74482023 None:intergenic 35.0%
GAATCCTGAGGTATATCAAA+GGG - Chr1:74484571-74484590 None:intergenic 35.0%
GATCACATTGCTTATTTAGC+AGG - Chr1:74483886-74483905 None:intergenic 35.0%
GATCTTTGCTTGCGTAATTT+GGG + Chr1:74484858-74484877 MsG0180004176.01.T01:intron 35.0%
GATTTATGAGCCCAAACATT+TGG + Chr1:74485782-74485801 MsG0180004176.01.T01:intron 35.0%
GATTTATGCTGTAAGCTCAT+TGG - Chr1:74484787-74484806 None:intergenic 35.0%
GGAGAGAGAATCTAATTTCA+TGG - Chr1:74484449-74484468 None:intergenic 35.0%
GGTACAATATAAGATACCCT+CGG + Chr1:74483396-74483415 MsG0180004176.01.T01:intron 35.0%
GTAATTTGGGTCTTTACACT+CGG + Chr1:74484871-74484890 MsG0180004176.01.T01:intron 35.0%
GTACAATATAAGATACCCTC+GGG + Chr1:74483397-74483416 MsG0180004176.01.T01:intron 35.0%
GTATATCAAAGGGTCTCAAA+GGG - Chr1:74484561-74484580 None:intergenic 35.0%
GTTGTAGTTGATTAAAAGGG+AGG + Chr1:74481637-74481656 MsG0180004176.01.T01:five_prime_UTR 35.0%
TACTTCTCTTGTAAGAAGCT+TGG + Chr1:74485983-74486002 MsG0180004176.01.T01:intron 35.0%
TAGTTGATTAAAAGGGAGGA+TGG + Chr1:74481641-74481660 MsG0180004176.01.T01:exon 35.0%
TATTTATACAGAGCTGAAGC+TGG - Chr1:74484962-74484981 None:intergenic 35.0%
TCATCTCAAAAGAGACTTGT+TGG + Chr1:74484337-74484356 MsG0180004176.01.T01:intron 35.0%
TCCACAACAATGATGACAAA+GGG + Chr1:74484638-74484657 MsG0180004176.01.T01:CDS 35.0%
TGAACGCTAATATTTGCTTG+AGG - Chr1:74482005-74482024 None:intergenic 35.0%
TGAATCCTGAGGTATATCAA+AGG - Chr1:74484572-74484591 None:intergenic 35.0%
TGATCTTTGCTTGCGTAATT+TGG + Chr1:74484857-74484876 MsG0180004176.01.T01:intron 35.0%
TGGTGAGTGGTAGTAAATAA+AGG - Chr1:74486020-74486039 None:intergenic 35.0%
TTAAAAAAATTTGGCAGGCC+AGG - Chr1:74483787-74483806 None:intergenic 35.0%
TTCTTAAATAGAGAAGGCCT+AGG - Chr1:74484243-74484262 None:intergenic 35.0%
TTGTTGTCGTAGTTAGGTTA+GGG + Chr1:74485671-74485690 MsG0180004176.01.T01:intron 35.0%
TTTATTCCAACGTGGACATA+TGG - Chr1:74483548-74483567 None:intergenic 35.0%
! ATAGGCTTCTAAAAAAGCCT+AGG + Chr1:74484223-74484242 MsG0180004176.01.T01:intron 35.0%
! ATGTTTTCACCAAGTCTCTA+AGG - Chr1:74483423-74483442 None:intergenic 35.0%
! ATTTTGTGGAGTTTAAGTCG+TGG + Chr1:74482841-74482860 MsG0180004176.01.T01:intron 35.0%
! CAATGTTTTCATGATCGAAC+TGG + Chr1:74485086-74485105 MsG0180004176.01.T01:intron 35.0%
! CCTTGGAGAATATTTTCTTG+AGG + Chr1:74482911-74482930 MsG0180004176.01.T01:intron 35.0%
! CTACAAAAACATTCGATTCG+AGG + Chr1:74481830-74481849 MsG0180004176.01.T01:CDS 35.0%
! CTTTAAGGACTTACATCTAG+AGG + Chr1:74482468-74482487 MsG0180004176.01.T01:intron 35.0%
! GAATAAAGCGTTTATTGCGT+TGG - Chr1:74481505-74481524 None:intergenic 35.0%
! GGGTGTTTCTAAATGAACAT+GGG + Chr1:74486068-74486087 MsG0180004176.01.T01:intron 35.0%
! GTGTAAGATCTATGGTTTGT+TGG + Chr1:74482254-74482273 MsG0180004176.01.T01:intron 35.0%
! TGGGTGTTTCTAAATGAACA+TGG + Chr1:74486067-74486086 MsG0180004176.01.T01:intron 35.0%
! TTGTCATTCATTTCAGGTCT+GGG + Chr1:74486694-74486713 MsG0180004176.01.T01:intron 35.0%
! TTTGTCATTCATTTCAGGTC+TGG + Chr1:74486693-74486712 MsG0180004176.01.T01:intron 35.0%
!! AATTATTTTTCCCCTTGGAC+AGG - Chr1:74485211-74485230 None:intergenic 35.0%
!! AGTGAGTAGAATTTGTTGGA+TGG + Chr1:74485646-74485665 MsG0180004176.01.T01:intron 35.0%
!! ATAGGCTTCTCTATTTCTGA+TGG - Chr1:74483188-74483207 None:intergenic 35.0%
!! CCACAGCATCTTTAATTTTG+TGG + Chr1:74482827-74482846 MsG0180004176.01.T01:intron 35.0%
!! CTCGGCTATTATTAACTTGT+AGG - Chr1:74484470-74484489 None:intergenic 35.0%
!! GAATGAACACCGATTTGATT+TGG - Chr1:74481393-74481412 None:intergenic 35.0%
!! TAAGCTCATTGGTTCACATA+CGG - Chr1:74484776-74484795 None:intergenic 35.0%
!! TTGTGGTTTGTTAACCATCA+GGG + Chr1:74482152-74482171 MsG0180004176.01.T01:intron 35.0%
!!! AAGTCTCTTTTGAGATGACT+AGG - Chr1:74484335-74484354 None:intergenic 35.0%
!!! AGTCTCTTTTGAGATGACTA+GGG - Chr1:74484334-74484353 None:intergenic 35.0%
!!! ATTTTTTTAAGGCCTAAGCC+TGG + Chr1:74483797-74483816 MsG0180004176.01.T01:intron 35.0%
!!! CTGTCATAGGCTTACTTTTT+AGG + Chr1:74483828-74483847 MsG0180004176.01.T01:intron 35.0%
!!! GTCATACACTTGTTTTGTCT+TGG - Chr1:74483017-74483036 None:intergenic 35.0%
!!! GTTGGTTTTACTTTGTTGTC+AGG + Chr1:74482272-74482291 MsG0180004176.01.T01:intron 35.0%
!!! TGGCCTGCCAAATTTTTTTA+AGG + Chr1:74483786-74483805 MsG0180004176.01.T01:intron 35.0%
!!! TTGGTGGTCATTTTTTAGTG+GGG + Chr1:74485801-74485820 MsG0180004176.01.T01:intron 35.0%
AAAACGATTGAGAGGGACAT+AGG - Chr1:74485289-74485308 None:intergenic 40.0%
AAAAGCCTCTTAGGCCTATT+AGG - Chr1:74484171-74484190 None:intergenic 40.0%
AAACGATTGAGAGGGACATA+GGG - Chr1:74485288-74485307 None:intergenic 40.0%
AAGATCGAAAGCCAAAATCG+TGG - Chr1:74486040-74486059 None:intergenic 40.0%
AAGTGTATGACAGTGTTTCC+AGG + Chr1:74483026-74483045 MsG0180004176.01.T01:intron 40.0%
AATATGTTGCCCATGATGTC+CGG - Chr1:74486742-74486761 None:intergenic 40.0%
AATCATGAGCAGTGGCTATA+GGG + Chr1:74482331-74482350 MsG0180004176.01.T01:intron 40.0%
AATGTCACACTCATCAAGCT+TGG + Chr1:74483375-74483394 MsG0180004176.01.T01:intron 40.0%
AATTCATACACACACTAGCC+TGG - Chr1:74487169-74487188 None:intergenic 40.0%
ACAGCATCAAGGATCATGAT+TGG + Chr1:74486954-74486973 MsG0180004176.01.T01:CDS 40.0%
ACCCTTTGTCATCATTGTTG+TGG - Chr1:74484642-74484661 None:intergenic 40.0%
AGAAAGAAAAGGATCGAACC+TGG - Chr1:74481455-74481474 None:intergenic 40.0%
AGATGAATGGCCTATACCTT+GGG + Chr1:74482598-74482617 MsG0180004176.01.T01:intron 40.0%
AGCCAGGATCTCTTTAATGA+AGG + Chr1:74486808-74486827 MsG0180004176.01.T01:CDS 40.0%
ATACCAATTCTTCTCCCTGA+TGG - Chr1:74482169-74482188 None:intergenic 40.0%
ATCATGGTGTGAAAACTGTG+TGG - Chr1:74485411-74485430 None:intergenic 40.0%
ATGCAATAGCTTGAATCCTG+AGG - Chr1:74484583-74484602 None:intergenic 40.0%
ATGGCATTGTTGTCGTAGTT+AGG + Chr1:74485665-74485684 MsG0180004176.01.T01:intron 40.0%
ATTTGTAGCATGGAACAGCA+TGG - Chr1:74485351-74485370 None:intergenic 40.0%
CAAAGACAAGGAGGAAACTA+TGG + Chr1:74482215-74482234 MsG0180004176.01.T01:intron 40.0%
CAATTACAGCATGAGTTCCT+CGG - Chr1:74486766-74486785 None:intergenic 40.0%
CATACAATAGCGCTGCTTAT+TGG + Chr1:74486452-74486471 MsG0180004176.01.T01:intron 40.0%
CATCTACCATGGTCTGAAAA+GGG + Chr1:74484712-74484731 MsG0180004176.01.T01:intron 40.0%
CCCAAATCGCCAAATCAAAT+CGG + Chr1:74481381-74481400 MsG0180004176.01.T01:five_prime_UTR 40.0%
CTGGTCATTGAAGACCATAT+TGG + Chr1:74483679-74483698 MsG0180004176.01.T01:intron 40.0%
CTGTTCCATGCTACAAATCT+TGG + Chr1:74485353-74485372 MsG0180004176.01.T01:intron 40.0%
GAAAGAAAAGGATCGAACCT+GGG - Chr1:74481454-74481473 None:intergenic 40.0%
GAGGAAGAAAACGATTGAGA+GGG - Chr1:74485296-74485315 None:intergenic 40.0%
GGATCAGTCTATGAGAAAAG+AGG - Chr1:74484535-74484554 None:intergenic 40.0%
GGTAGTCCAAAACAGTTCAA+TGG - Chr1:74482575-74482594 None:intergenic 40.0%
GGTATATCAAAGGGTCTCAA+AGG - Chr1:74484562-74484581 None:intergenic 40.0%
GTCCACAACAATGATGACAA+AGG + Chr1:74484637-74484656 MsG0180004176.01.T01:CDS 40.0%
GTTACTACTAACCCTACTGT+TGG + Chr1:74481786-74481805 MsG0180004176.01.T01:CDS 40.0%
GTTGATCTTGCTTGCTTCTA+GGG + Chr1:74481906-74481925 MsG0180004176.01.T01:intron 40.0%
GTTGATTAAAAGGGAGGATG+GGG + Chr1:74481643-74481662 MsG0180004176.01.T01:exon 40.0%
TAACCATCAGGGAGAAGAAT+TGG + Chr1:74482163-74482182 MsG0180004176.01.T01:intron 40.0%
TAGTTAGGTTAGGGTTGGAT+TGG + Chr1:74485680-74485699 MsG0180004176.01.T01:intron 40.0%
TCAGGGAGAAGAATTGGTAT+AGG + Chr1:74482169-74482188 MsG0180004176.01.T01:intron 40.0%
TCCATCCAAGACCATCATAA+AGG - Chr1:74487015-74487034 None:intergenic 40.0%
TGAGGAAGAAAACGATTGAG+AGG - Chr1:74485297-74485316 None:intergenic 40.0%
TGCTATAGTTGCAACCTGAT+TGG + Chr1:74482441-74482460 MsG0180004176.01.T01:intron 40.0%
TGGGATATTATCAGTCACCT+TGG + Chr1:74482894-74482913 MsG0180004176.01.T01:intron 40.0%
TGTTGATCTTGCTTGCTTCT+AGG + Chr1:74481905-74481924 MsG0180004176.01.T01:intron 40.0%
TTATGAGCCCAAACATTTGG+TGG + Chr1:74485785-74485804 MsG0180004176.01.T01:intron 40.0%
TTGATTAAAAGGGAGGATGG+GGG + Chr1:74481644-74481663 MsG0180004176.01.T01:exon 40.0%
TTGCTAGATCTAGTGAAACC+GGG - Chr1:74484405-74484424 None:intergenic 40.0%
TTGGACTACCATGAGATGAA+TGG + Chr1:74482585-74482604 MsG0180004176.01.T01:intron 40.0%
TTTAAGAAAAAAGCCTGGCC+TGG + Chr1:74484255-74484274 MsG0180004176.01.T01:intron 40.0%
! ATCAGAATTGTTACTTCGGC+GGG - Chr1:74484841-74484860 None:intergenic 40.0%
! ATCGTGCTCCTCAATTTTGT+TGG - Chr1:74486227-74486246 None:intergenic 40.0%
! CCTATTTAGCTTAAAAGGCC+AGG - Chr1:74484208-74484227 None:intergenic 40.0%
! CTGTTAAATTTTGCTACGGC+TGG + Chr1:74485473-74485492 MsG0180004176.01.T01:intron 40.0%
! GATCAGAATTGTTACTTCGG+CGG - Chr1:74484842-74484861 None:intergenic 40.0%
!! AAGCTCATTGGTTCACATAC+GGG - Chr1:74484775-74484794 None:intergenic 40.0%
!! ACCGATTTGATTTGGCGATT+TGG - Chr1:74481385-74481404 None:intergenic 40.0%
!! CCGATTTGATTTGGCGATTT+GGG - Chr1:74481384-74481403 None:intergenic 40.0%
!! CCTGGCCTTTTAAGCTAAAT+AGG + Chr1:74484205-74484224 MsG0180004176.01.T01:intron 40.0%
!! GTTAGGGTTGGATTGGTTTA+GGG + Chr1:74485687-74485706 MsG0180004176.01.T01:intron 40.0%
!! GTTGTGGTTTGTTAACCATC+AGG + Chr1:74482151-74482170 MsG0180004176.01.T01:intron 40.0%
!! TTAGGGTTGGATTGGTTTAG+GGG + Chr1:74485688-74485707 MsG0180004176.01.T01:intron 40.0%
!!! CCTGTACCAGTTTTGGAAAA+CGG + Chr1:74485184-74485203 MsG0180004176.01.T01:intron 40.0%
!!! CTTTTGAGATGACTAGGGAT+GGG - Chr1:74484329-74484348 None:intergenic 40.0%
!!! GAGTCCTCTTGTTTTGAAGA+GGG + Chr1:74486152-74486171 MsG0180004176.01.T01:intron 40.0%
!!! GATGAACTTTTCAGGTTGCT+GGG + Chr1:74486830-74486849 MsG0180004176.01.T01:CDS 40.0%
!!! TCTTTTGAGATGACTAGGGA+TGG - Chr1:74484330-74484349 None:intergenic 40.0%
!!! TGAGTCCTCTTGTTTTGAAG+AGG + Chr1:74486151-74486170 MsG0180004176.01.T01:intron 40.0%
!!! TTACTTTTTAGGCCTGAGTC+TGG + Chr1:74483839-74483858 MsG0180004176.01.T01:intron 40.0%
!!! TTGGCTGCACTGTGTTTTTT+GGG - Chr1:74486208-74486227 None:intergenic 40.0%
AAACAGGGCAGCTCAAACAA+AGG + Chr1:74483589-74483608 MsG0180004176.01.T01:intron 45.0%
AAACCCACATCATGCTTTGC+CGG - Chr1:74487053-74487072 None:intergenic 45.0%
AAAGCATGATGTGGGTTTGC+TGG + Chr1:74487055-74487074 MsG0180004176.01.T01:exon 45.0%
AAAGCCAAAATCGTGGTGAG+TGG - Chr1:74486033-74486052 None:intergenic 45.0%
AAATGCAGATTGGGTCAGCT+CGG - Chr1:74484488-74484507 None:intergenic 45.0%
AAGAAAGACTCCGGACATCA+TGG + Chr1:74486729-74486748 MsG0180004176.01.T01:CDS 45.0%
AAGGCTACTGGTCATCTCTA+GGG + Chr1:74483719-74483738 MsG0180004176.01.T01:intron 45.0%
AGAAAGACTCCGGACATCAT+GGG + Chr1:74486730-74486749 MsG0180004176.01.T01:CDS 45.0%
AGATGACTAGGGATGGGAAT+AGG - Chr1:74484323-74484342 None:intergenic 45.0%
AGCTTCAGTGGTTTGATCTC+TGG + Chr1:74485936-74485955 MsG0180004176.01.T01:CDS 45.0%
CAGTGCAGCCAACAAAATTG+AGG + Chr1:74486216-74486235 MsG0180004176.01.T01:intron 45.0%
CCAATCTTCACCATCTACCA+TGG + Chr1:74484701-74484720 MsG0180004176.01.T01:intron 45.0%
CCATCTACCATGGTCTGAAA+AGG + Chr1:74484711-74484730 MsG0180004176.01.T01:intron 45.0%
CCATGGTAGATGGTGAAGAT+TGG - Chr1:74484704-74484723 None:intergenic 45.0%
CTTATCATAGTTGCCTTGCG+AGG + Chr1:74483636-74483655 MsG0180004176.01.T01:intron 45.0%
CTTATTTAGCAGGCCGTATC+AGG - Chr1:74483876-74483895 None:intergenic 45.0%
CTTGTAAGAAGCTTGGCTAC+AGG + Chr1:74485990-74486009 MsG0180004176.01.T01:intron 45.0%
GAATCATGAGCAGTGGCTAT+AGG + Chr1:74482330-74482349 MsG0180004176.01.T01:intron 45.0%
GACAAACGCGATCCCTAATA+TGG + Chr1:74482762-74482781 MsG0180004176.01.T01:intron 45.0%
GAGACCCTTTGATATACCTC+AGG + Chr1:74484564-74484583 MsG0180004176.01.T01:CDS 45.0%
GAGATGAATGGCCTATACCT+TGG + Chr1:74482597-74482616 MsG0180004176.01.T01:intron 45.0%
GATCAAACCACTGAAGCTTC+TGG - Chr1:74485934-74485953 None:intergenic 45.0%
GATCTAGTGAAACCGGGATA+TGG - Chr1:74484399-74484418 None:intergenic 45.0%
GCTTTCGATCTTGCTTGCTT+GGG + Chr1:74486048-74486067 MsG0180004176.01.T01:intron 45.0%
GGCCATTCAAAAAGCCTCTT+AGG - Chr1:74484180-74484199 None:intergenic 45.0%
GGGACGAACATTGCAATTTG+TGG - Chr1:74482809-74482828 None:intergenic 45.0%
GGGCAATGATGTCTAGATTC+TGG + Chr1:74481664-74481683 MsG0180004176.01.T01:CDS 45.0%
GGGTATGTCAAGTCTAGTCA+CGG + Chr1:74484658-74484677 MsG0180004176.01.T01:intron 45.0%
GGTAGATGGTGAAGATTGGT+TGG - Chr1:74484700-74484719 None:intergenic 45.0%
GGTATAGGCCATTCATCTCA+TGG - Chr1:74482596-74482615 None:intergenic 45.0%
GTCCCACTTTCCACAATACA+CGG + Chr1:74486391-74486410 MsG0180004176.01.T01:intron 45.0%
GTGTGACATTTACACCAGCT+TGG - Chr1:74483365-74483384 None:intergenic 45.0%
GTTGAAGGTTTGCGATCTGT+TGG + Chr1:74485578-74485597 MsG0180004176.01.T01:intron 45.0%
GTTGCGATTGCGAAGAGAAT+TGG - Chr1:74481415-74481434 None:intergenic 45.0%
TAACCGGCAAAGCATGATGT+GGG + Chr1:74487047-74487066 MsG0180004176.01.T01:exon 45.0%
TAAGGCTACTGGTCATCTCT+AGG + Chr1:74483718-74483737 MsG0180004176.01.T01:intron 45.0%
TATAGGCGGTGACAAAGACA+AGG + Chr1:74482203-74482222 MsG0180004176.01.T01:intron 45.0%
TCAAAGGGTCTCAAAGGGAA+AGG - Chr1:74484556-74484575 None:intergenic 45.0%
TCATGATCCAGAAGCTTCAG+TGG + Chr1:74485924-74485943 MsG0180004176.01.T01:intron 45.0%
TCATGGGCAACATATTACCG+AGG + Chr1:74486746-74486765 MsG0180004176.01.T01:CDS 45.0%
TCCCACTTTCCACAATACAC+GGG + Chr1:74486392-74486411 MsG0180004176.01.T01:intron 45.0%
TGAAGTCCATATGTCCACGT+TGG + Chr1:74483539-74483558 MsG0180004176.01.T01:intron 45.0%
TGACATTTACACCAGCTTGG+AGG - Chr1:74483362-74483381 None:intergenic 45.0%
TGGCTATAGGGTTTGATCGT+GGG + Chr1:74482343-74482362 MsG0180004176.01.T01:intron 45.0%
TGTCGTAGTTAGGTTAGGGT+TGG + Chr1:74485675-74485694 MsG0180004176.01.T01:intron 45.0%
TTGCTGGGTAAGAGCTAGTT+TGG + Chr1:74482621-74482640 MsG0180004176.01.T01:intron 45.0%
TTTGTCCCAAATCCTGCTGA+TGG - Chr1:74482748-74482767 None:intergenic 45.0%
! AACCTGATTGGCCGTCTTTA+AGG + Chr1:74482453-74482472 MsG0180004176.01.T01:intron 45.0%
! ACAGGACCGTTTTCCAAAAC+TGG - Chr1:74485193-74485212 None:intergenic 45.0%
! ACTACCACTCACCACGATTT+TGG + Chr1:74486026-74486045 MsG0180004176.01.T01:intron 45.0%
! ACTTTGTTGTCAGGGTGACA+TGG + Chr1:74482281-74482300 MsG0180004176.01.T01:intron 45.0%
! AGAGCATCAGTGATTTCAGC+AGG - Chr1:74486926-74486945 None:intergenic 45.0%
! CCGTTTTCCAAAACTGGTAC+AGG - Chr1:74485187-74485206 None:intergenic 45.0%
! CCTTTTCAGACCATGGTAGA+TGG - Chr1:74484714-74484733 None:intergenic 45.0%
! GCCTTTATGATGGTCTTGGA+TGG + Chr1:74487011-74487030 MsG0180004176.01.T01:CDS 45.0%
! GGCCTAAGAGGCTTTTTGAA+TGG + Chr1:74484175-74484194 MsG0180004176.01.T01:intron 45.0%
! GTTGTTGGATTGGATAACGC+TGG + Chr1:74481723-74481742 MsG0180004176.01.T01:CDS 45.0%
! GTTTTCATGATCGAACTGGC+TGG + Chr1:74485090-74485109 MsG0180004176.01.T01:intron 45.0%
! TACTGGTCATCTCTAGGGAT+GGG + Chr1:74483724-74483743 MsG0180004176.01.T01:intron 45.0%
! TCAGAATTGTTACTTCGGCG+GGG - Chr1:74484840-74484859 None:intergenic 45.0%
! TCATCTCTAGGGATGGGAAT+AGG + Chr1:74483730-74483749 MsG0180004176.01.T01:intron 45.0%
! TCATTTCAGGTCTGGGATCT+TGG + Chr1:74486701-74486720 MsG0180004176.01.T01:intron 45.0%
! TCTGTCACTTCACAGCATCA+AGG + Chr1:74486943-74486962 MsG0180004176.01.T01:CDS 45.0%
! TGTTTGAGCTGCCCTGTTTT+TGG - Chr1:74483588-74483607 None:intergenic 45.0%
!! GGTTAGGGTTGGATTGGTTT+AGG + Chr1:74485686-74485705 MsG0180004176.01.T01:intron 45.0%
!! TGTGGGTTTGCTGGAAACTA+AGG + Chr1:74487064-74487083 MsG0180004176.01.T01:three_prime_UTR 45.0%
!! TTGATGGTGCATCAGAAGTC+TGG - Chr1:74482942-74482961 None:intergenic 45.0%
!!! GGATGAACTTTTCAGGTTGC+TGG + Chr1:74486829-74486848 MsG0180004176.01.T01:CDS 45.0%
!!! GTTGGCTGCACTGTGTTTTT+TGG - Chr1:74486209-74486228 None:intergenic 45.0%
!!! TGGCTGCACTGTGTTTTTTG+GGG - Chr1:74486207-74486226 None:intergenic 45.0%
AACTTGGTTCCAAGCCAGTC+AGG + Chr1:74485128-74485147 MsG0180004176.01.T01:intron 50.0%
AAGGGTCCATCAGCAGGATT+TGG + Chr1:74482739-74482758 MsG0180004176.01.T01:intron 50.0%
ACCAACTACCCCGTGTATTG+TGG - Chr1:74486404-74486423 None:intergenic 50.0%
ACCCCGTGTATTGTGGAAAG+TGG - Chr1:74486397-74486416 None:intergenic 50.0%
AGAAAAGGATCGAACCTGGG+AGG - Chr1:74481451-74481470 None:intergenic 50.0%
AGCTGTTTAGATGGCCTGAC+TGG - Chr1:74485145-74485164 None:intergenic 50.0%
AGGGTCCATCAGCAGGATTT+GGG + Chr1:74482740-74482759 MsG0180004176.01.T01:intron 50.0%
ATAAAGGCCGTCTCCTGAGA+GGG - Chr1:74486999-74487018 None:intergenic 50.0%
ATCGAACTGGCTGGTAGAAC+CGG + Chr1:74485099-74485118 MsG0180004176.01.T01:intron 50.0%
ATGGAACAGCATGGAGGAAG+GGG - Chr1:74485342-74485361 None:intergenic 50.0%
CATGGAACAGCATGGAGGAA+GGG - Chr1:74485343-74485362 None:intergenic 50.0%
CCCACTTTCCACAATACACG+GGG + Chr1:74486393-74486412 MsG0180004176.01.T01:intron 50.0%
CCCCGTGTATTGTGGAAAGT+GGG - Chr1:74486396-74486415 None:intergenic 50.0%
CCTGCCCTCTTCAAAACAAG+AGG - Chr1:74486159-74486178 None:intergenic 50.0%
CGACGTTGCTACCAACAGTA+GGG - Chr1:74481800-74481819 None:intergenic 50.0%
CTTCAATAGGCCGGCCTAAT+AGG + Chr1:74484154-74484173 MsG0180004176.01.T01:intron 50.0%
GAAGTTAAGGGTCCATCAGC+AGG + Chr1:74482733-74482752 MsG0180004176.01.T01:intron 50.0%
GACGACAATGACATGCTGAG+GGG - Chr1:74485389-74485408 None:intergenic 50.0%
GACGGCCTTTATGATGGTCT+TGG + Chr1:74487007-74487026 MsG0180004176.01.T01:CDS 50.0%
GGACGACAATGACATGCTGA+GGG - Chr1:74485390-74485409 None:intergenic 50.0%
GGCTATAGGGTTTGATCGTG+GGG + Chr1:74482344-74482363 MsG0180004176.01.T01:intron 50.0%
GGCTTTCGATCTTGCTTGCT+TGG + Chr1:74486047-74486066 MsG0180004176.01.T01:intron 50.0%
GGTTTGCGATCTGTTGGTGT+TGG + Chr1:74485584-74485603 MsG0180004176.01.T01:intron 50.0%
GTAACCGGCAAAGCATGATG+TGG + Chr1:74487046-74487065 MsG0180004176.01.T01:exon 50.0%
GTCCTTAAAGACGGCCAATC+AGG - Chr1:74482458-74482477 None:intergenic 50.0%
GTGGCTATAGGGTTTGATCG+TGG + Chr1:74482342-74482361 MsG0180004176.01.T01:intron 50.0%
TACCCAGCAACCCAAGGTAT+AGG - Chr1:74482611-74482630 None:intergenic 50.0%
TCAGGAGACGGCCTTTATGA+TGG + Chr1:74487001-74487020 MsG0180004176.01.T01:CDS 50.0%
TCCACAATACACGGGGTAGT+TGG + Chr1:74486400-74486419 MsG0180004176.01.T01:intron 50.0%
TCGACGTTGCTACCAACAGT+AGG - Chr1:74481801-74481820 None:intergenic 50.0%
TCTAGGGATGGGAATAGGCT+AGG + Chr1:74483735-74483754 MsG0180004176.01.T01:intron 50.0%
TGCTGATCCACTGAGTCATG+AGG - Chr1:74483056-74483075 None:intergenic 50.0%
TGGAAAACGGTCCTGTCCAA+GGG + Chr1:74485197-74485216 MsG0180004176.01.T01:intron 50.0%
TGGACGACAATGACATGCTG+AGG - Chr1:74485391-74485410 None:intergenic 50.0%
TGTAGCATGGAACAGCATGG+AGG - Chr1:74485348-74485367 None:intergenic 50.0%
TGTCCAGGAAAAGTTGCGTC+AGG - Chr1:74485058-74485077 None:intergenic 50.0%
TTGACAGCAGTGATAGAGCC+AGG + Chr1:74486792-74486811 MsG0180004176.01.T01:CDS 50.0%
TTGAGAGGGACATAGGGTCT+CGG - Chr1:74485282-74485301 None:intergenic 50.0%
TTGGAAAACGGTCCTGTCCA+AGG + Chr1:74485196-74485215 MsG0180004176.01.T01:intron 50.0%
TTTGTTCAACCTGGGCAGAG+TGG - Chr1:74485435-74485454 None:intergenic 50.0%
! CGCAGAACCTGTACCAGTTT+TGG + Chr1:74485177-74485196 MsG0180004176.01.T01:intron 50.0%
! CTACTGGTCATCTCTAGGGA+TGG + Chr1:74483723-74483742 MsG0180004176.01.T01:intron 50.0%
! GAGGCTTTTTGAATGGCCTG+TGG + Chr1:74484182-74484201 MsG0180004176.01.T01:intron 50.0%
! GGCCTTCTGAAAGCCTGATA+CGG + Chr1:74483860-74483879 MsG0180004176.01.T01:intron 50.0%
! GGGAATCCCTTTTCAGACCA+TGG - Chr1:74484721-74484740 None:intergenic 50.0%
! TTGGCGGACAAGAAAGACTC+CGG + Chr1:74486720-74486739 MsG0180004176.01.T01:CDS 50.0%
! TTTAGATGGCCTGACTGGCT+TGG - Chr1:74485140-74485159 None:intergenic 50.0%
! TTTCAGGTCTGGGATCTTGG+CGG + Chr1:74486704-74486723 MsG0180004176.01.T01:intron 50.0%
! TTTTTGAATGGCCTGTGGCC+TGG + Chr1:74484187-74484206 MsG0180004176.01.T01:intron 50.0%
!! ACTGGCTTGGAACCAAGTTC+GGG - Chr1:74485127-74485146 None:intergenic 50.0%
!! ATGGTCTTGGATGGATTGCC+GGG + Chr1:74487020-74487039 MsG0180004176.01.T01:CDS 50.0%
!! GACTGGCTTGGAACCAAGTT+CGG - Chr1:74485128-74485147 None:intergenic 50.0%
!! GATGGTCTTGGATGGATTGC+CGG + Chr1:74487019-74487038 MsG0180004176.01.T01:CDS 50.0%
!! GGAGATGTGCATTTTGGCAG+AGG + Chr1:74482783-74482802 MsG0180004176.01.T01:intron 50.0%
!!! CCTCTTGTTTTGAAGAGGGC+AGG + Chr1:74486156-74486175 MsG0180004176.01.T01:intron 50.0%
AAATTTGGCAGGCCAGGCTC+AGG - Chr1:74483781-74483800 None:intergenic 55.0%
AAGGGGAACGACAGTGAGCA+AGG - Chr1:74485325-74485344 None:intergenic 55.0%
ACAGTGAGCAAGGCAGTGTG+AGG - Chr1:74485315-74485334 None:intergenic 55.0%
ACTAGGGATGGGAATAGGCC+AGG - Chr1:74484318-74484337 None:intergenic 55.0%
ACTGAGTCATGAGGCATGCC+TGG - Chr1:74483047-74483066 None:intergenic 55.0%
AGCTCTTACCCAGCAACCCA+AGG - Chr1:74482617-74482636 None:intergenic 55.0%
AGCTTAAAAGGCCAGGCCAC+AGG - Chr1:74484201-74484220 None:intergenic 55.0%
AGGCATGCCTCATGACTCAG+TGG + Chr1:74483046-74483065 MsG0180004176.01.T01:intron 55.0%
AGGCCTTGCAAAGCCTAGCT+CGG - Chr1:74483761-74483780 None:intergenic 55.0%
AGGCGGTGACAAAGACAAGG+AGG + Chr1:74482206-74482225 MsG0180004176.01.T01:intron 55.0%
CAATGACATGCTGAGGGGTG+TGG - Chr1:74485384-74485403 None:intergenic 55.0%
CATAAAGGCCGTCTCCTGAG+AGG - Chr1:74487000-74487019 None:intergenic 55.0%
CTCAACACTCTCCTCCAAGC+TGG + Chr1:74483348-74483367 MsG0180004176.01.T01:intron 55.0%
GCATGGAACAGCATGGAGGA+AGG - Chr1:74485344-74485363 None:intergenic 55.0%
GCCTCTTAGGCCTATTAGGC+CGG - Chr1:74484167-74484186 None:intergenic 55.0%
GCTACGGCTGGAATGCATGT+AGG + Chr1:74485485-74485504 MsG0180004176.01.T01:intron 55.0%
GCTTTCAGAAGGCCAGACTC+AGG - Chr1:74483854-74483873 None:intergenic 55.0%
GGAAAACGGTCCTGTCCAAG+GGG + Chr1:74485198-74485217 MsG0180004176.01.T01:intron 55.0%
GGCCGTATCAGGCTTTCAGA+AGG - Chr1:74483865-74483884 None:intergenic 55.0%
GGGAGCAATGCAAGTAGAGC+TGG + Chr1:74482364-74482383 MsG0180004176.01.T01:intron 55.0%
TCGAACTGGCTGGTAGAACC+GGG + Chr1:74485100-74485119 MsG0180004176.01.T01:intron 55.0%
TTGGAACCAAGTTCGGGTCC+CGG - Chr1:74485121-74485140 None:intergenic 55.0%
! GGACCTGACGCAACTTTTCC+TGG + Chr1:74485052-74485071 MsG0180004176.01.T01:intron 55.0%
! GGCCTATACCTTGGGTTGCT+GGG + Chr1:74482606-74482625 MsG0180004176.01.T01:intron 55.0%
! TGGCCTATACCTTGGGTTGC+TGG + Chr1:74482605-74482624 MsG0180004176.01.T01:intron 55.0%
!! ACCAAGTCTCTAAGGCCCGA+GGG - Chr1:74483415-74483434 None:intergenic 55.0%
ACCATGATGCCACTCTGCCC+AGG + Chr1:74485423-74485442 MsG0180004176.01.T01:intron 60.0%
ACCCTCGGGCCTTAGAGACT+TGG + Chr1:74483411-74483430 MsG0180004176.01.T01:intron 60.0%
ACCTGGGCAGAGTGGCATCA+TGG - Chr1:74485427-74485446 None:intergenic 60.0%
AGGCCGAGCTAGGCTTTGCA+AGG + Chr1:74483755-74483774 MsG0180004176.01.T01:intron 60.0%
CACAGACAACGCTACCTCCC+AGG + Chr1:74481434-74481453 MsG0180004176.01.T01:five_prime_UTR 60.0%
GCCGGCCTAATAGGCCTAAG+AGG + Chr1:74484163-74484182 MsG0180004176.01.T01:intron 60.0%
GGAATAGGCTAGGCCGAGCT+AGG + Chr1:74483745-74483764 MsG0180004176.01.T01:intron 60.0%
GTAAGCCTATGACAGGCCGC+AGG - Chr1:74483823-74483842 None:intergenic 60.0%
GTAGAACCGGGACCCGAACT+TGG + Chr1:74485112-74485131 MsG0180004176.01.T01:intron 60.0%
TAAGGCCTAAGCCTGGCCTG+CGG + Chr1:74483804-74483823 MsG0180004176.01.T01:intron 60.0%
TGGATTGCCGGGCGAGTAAC+CGG + Chr1:74487031-74487050 MsG0180004176.01.T01:CDS 60.0%
! TGCTTTGCCGGTTACTCGCC+CGG - Chr1:74487041-74487060 None:intergenic 60.0%
!! CACCAAGTCTCTAAGGCCCG+AGG - Chr1:74483416-74483435 None:intergenic 60.0%
AATAGGCCAGGCCGGCCTAC+AGG - Chr1:74484306-74484325 None:intergenic 65.0%
ATAGGCCAGGCCGGCCTACA+GGG - Chr1:74484305-74484324 None:intergenic 65.0%
CAAGCTTGCAGCGCCCTCTC+AGG + Chr1:74486983-74487002 MsG0180004176.01.T01:CDS 65.0%
CCTACGGCCTAGCCTACGAC+AGG - Chr1:74484281-74484300 None:intergenic 65.0%
CCTGTCGTAGGCTAGGCCGT+AGG + Chr1:74484278-74484297 MsG0180004176.01.T01:intron 65.0%
GGCTTTGCAAGGCCTGAGCC+TGG + Chr1:74483766-74483785 MsG0180004176.01.T01:intron 65.0%
GGGATGGGAATAGGCCAGGC+CGG - Chr1:74484314-74484333 None:intergenic 65.0%
TGCAGCGCCCTCTCAGGAGA+CGG + Chr1:74486989-74487008 MsG0180004176.01.T01:CDS 65.0%
ACAGGCCGCAGGCCAGGCTT+AGG - Chr1:74483812-74483831 None:intergenic 70.0%
AGCCTACGACAGGCCAGGCC+AGG - Chr1:74484271-74484290 None:intergenic 70.0%
AGCCTGGCCTGGCCTGTCGT+AGG + Chr1:74484266-74484285 MsG0180004176.01.T01:intron 70.0%
CCTATGACAGGCCGCAGGCC+AGG - Chr1:74483818-74483837 None:intergenic 70.0%
CCTGGCCTGCGGCCTGTCAT+AGG + Chr1:74483815-74483834 MsG0180004176.01.T01:intron 70.0%
GCTAGGCCGTAGGCCCCTGT+AGG + Chr1:74484288-74484307 MsG0180004176.01.T01:intron 70.0%
GGCCTAGCCTACGACAGGCC+AGG - Chr1:74484276-74484295 None:intergenic 70.0%
GGCCTGGCCTGTCGTAGGCT+AGG + Chr1:74484271-74484290 MsG0180004176.01.T01:intron 70.0%
TAGGCCAGGCCGGCCTACAG+GGG - Chr1:74484304-74484323 None:intergenic 70.0%
GGCCGGCCTACAGGGGCCTA+CGG - Chr1:74484297-74484316 None:intergenic 75.0%
GGCCGTAGGCCCCTGTAGGC+CGG + Chr1:74484292-74484311 MsG0180004176.01.T01:intron 75.0%
TAGGCCCCTGTAGGCCGGCC+TGG + Chr1:74484297-74484316 MsG0180004176.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 74481281 74487278 74481281 ID=MsG0180004176.01;Name=MsG0180004176.01
Chr1 mRNA 74481281 74487278 74481281 ID=MsG0180004176.01.T01;Parent=MsG0180004176.01;Name=MsG0180004176.01.T01;_AED=0.49;_eAED=0.57;_QI=242|0.25|0.6|1|0.75|0.6|5|215|238
Chr1 exon 74481281 74481455 74481281 ID=MsG0180004176.01.T01:exon:31590;Parent=MsG0180004176.01.T01
Chr1 exon 74481593 74481851 74481593 ID=MsG0180004176.01.T01:exon:31591;Parent=MsG0180004176.01.T01
Chr1 exon 74484547 74484659 74484547 ID=MsG0180004176.01.T01:exon:31592;Parent=MsG0180004176.01.T01
Chr1 exon 74485935 74485992 74485935 ID=MsG0180004176.01.T01:exon:31593;Parent=MsG0180004176.01.T01
Chr1 exon 74486710 74487278 74486710 ID=MsG0180004176.01.T01:exon:31594;Parent=MsG0180004176.01.T01
Chr1 five_prime_UTR 74481281 74481455 74481281 ID=MsG0180004176.01.T01:five_prime_utr;Parent=MsG0180004176.01.T01
Chr1 five_prime_UTR 74481593 74481659 74481593 ID=MsG0180004176.01.T01:five_prime_utr;Parent=MsG0180004176.01.T01
Chr1 CDS 74481660 74481851 74481660 ID=MsG0180004176.01.T01:cds;Parent=MsG0180004176.01.T01
Chr1 CDS 74484547 74484659 74484547 ID=MsG0180004176.01.T01:cds;Parent=MsG0180004176.01.T01
Chr1 CDS 74485935 74485992 74485935 ID=MsG0180004176.01.T01:cds;Parent=MsG0180004176.01.T01
Chr1 CDS 74486710 74487063 74486710 ID=MsG0180004176.01.T01:cds;Parent=MsG0180004176.01.T01
Chr1 three_prime_UTR 74487064 74487278 74487064 ID=MsG0180004176.01.T01:three_prime_utr;Parent=MsG0180004176.01.T01
Gene Sequence

>MsG0180004176.01.T01

ATGGGGGCAATGATGTCTAGATTCTGGTTCATGTTATTCCCTGCTAAAGAGTATAAGATTGTTGTTGTTGGATTGGATAACGCTGGTAAAACTACCACTCTTTATAAATTGCATCTTGGTGAGGTTGTTACTACTAACCCTACTGTTGGTAGCAACGTCGAAGAGCTCGTCTACAAAAACATTCGATTCGAGACTGATCCTTTCCCTTTGAGACCCTTTGATATACCTCAGGATTCAAGCTATTGCATTCCAATGACTATCACAAAGAGAATTGAGTATTTGGTCCACAACAATGATGACAAAGGAAGCTTCAGTGGTTTGATCTCTGGTCCGATTTTCAAAGCATTAATTTCTACTTCTCTTGTCTGGGATCTTGGCGGACAAGAAAGACTCCGGACATCATGGGCAACATATTACCGAGGAACTCATGCTGTAATTGCAGTGATTGACAGCAGTGATAGAGCCAGGATCTCTTTAATGAAGGATGAACTTTTCAGGTTGCTGGGTCATGAAGATTTACAACATTCAGTCATCCTTGTCTTTGCTAATAAACAAGATATCAAGGATGCTATGACTCCTGCTGAAATCACTGATGCTCTGTCACTTCACAGCATCAAGGATCATGATTGGCATATACAAGCTTGCAGCGCCCTCTCAGGAGACGGCCTTTATGATGGTCTTGGATGGATTGCCGGGCGAGTAACCGGCAAAGCATGA
Protein sequence

>MsG0180004176.01.T01

MGAMMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTNPTVGSNVEELVYKNIRFETDPFPLRPFDIPQDSSYCIPMTITKRIEYLVHNNDDKGSFSGLISGPIFKALISTSLVWDLGGQERLRTSWATYYRGTHAVIAVIDSSDRARISLMKDELFRLLGHEDLQHSVILVFANKQDIKDAMTPAEITDALSLHSIKDHDWHIQACSALSGDGLYDGLGWIAGRVTGKA*