AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004291.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004291.01.T01 MTR_1g076550 99.145 117 1 0 165 281 65 181 2.49e-81 243
MsG0180004291.01.T01 MTR_1g076550 96.721 61 2 0 1 61 1 61 5.81e-35 124
MsG0180004291.01.T01 MTR_5g034130 48.718 117 60 0 165 281 65 181 3.11e-38 133
MsG0180004291.01.T01 MTR_5g034130 56.667 60 26 0 1 60 1 60 2.58e-14 70.1
MsG0180004291.01.T01 MTR_5g034125 48.718 117 60 0 165 281 65 181 3.11e-38 133
MsG0180004291.01.T01 MTR_5g034125 56.667 60 26 0 1 60 1 60 2.58e-14 70.1
MsG0180004291.01.T01 MTR_1g086480 48.718 117 60 0 165 281 65 181 3.32e-38 133
MsG0180004291.01.T01 MTR_1g086480 56.667 60 26 0 1 60 1 60 3.19e-14 69.7
MsG0180004291.01.T01 MTR_6g005820 48.718 117 60 0 165 281 65 181 3.94e-38 132
MsG0180004291.01.T01 MTR_6g005820 56.667 60 26 0 1 60 1 60 2.43e-14 70.1
MsG0180004291.01.T01 MTR_7g109960 47.863 117 61 0 165 281 65 181 1.08e-37 131
MsG0180004291.01.T01 MTR_7g109960 56.667 60 26 0 1 60 1 60 2.97e-14 69.7
MsG0180004291.01.T01 MTR_5g016540 46.552 116 62 0 165 280 65 180 5.45e-36 127
MsG0180004291.01.T01 MTR_5g016540 57.627 59 25 0 1 59 1 59 1.83e-14 70.5
MsG0180004291.01.T01 MTR_5g007810 51.818 110 53 0 165 274 65 174 2.80e-34 123
MsG0180004291.01.T01 MTR_5g007810 50.000 60 30 0 1 60 1 60 7.52e-13 66.2
MsG0180004291.01.T01 MTR_4g077640 49.580 119 58 1 156 274 58 174 6.91e-34 122
MsG0180004291.01.T01 MTR_4g077640 50.000 60 30 0 1 60 1 60 2.12e-12 65.1
MsG0180004291.01.T01 MTR_4g128910 44.545 110 61 0 165 274 65 174 1.75e-30 113
MsG0180004291.01.T01 MTR_4g128910 53.333 60 28 0 1 60 1 60 7.32e-14 68.9
MsG0180004291.01.T01 MTR_5g007820 43.220 118 65 1 165 280 65 182 3.50e-28 107
MsG0180004291.01.T01 MTR_5g007820 54.839 62 28 0 1 62 1 62 5.60e-14 69.3
MsG0180004291.01.T01 MTR_8g077540 40.171 117 69 1 165 280 64 180 1.36e-24 97.8
MsG0180004291.01.T01 MTR_8g077540 40.171 117 69 1 165 280 90 206 1.66e-24 98.2
MsG0180004291.01.T01 MTR_2g022200 38.889 108 66 0 166 273 73 180 5.35e-20 85.9
MsG0180004291.01.T01 MTR_5g078090 40.909 88 52 0 165 252 68 155 5.71e-17 77.4
MsG0180004291.01.T01 MTR_5g015370 37.500 88 55 0 165 252 68 155 6.22e-14 68.9
MsG0180004291.01.T01 MTR_4g026950 35.227 88 57 0 165 252 49 136 3.94e-13 66.2
MsG0180004291.01.T01 MTR_5g007840 51.613 62 30 0 1 62 1 62 1.53e-12 65.5
MsG0180004291.01.T01 MTR_1g076590 67.500 40 13 0 222 261 8 47 7.94e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004291.01.T01 AT3G22950 86.325 117 16 0 165 281 65 181 2.07e-70 215
MsG0180004291.01.T01 AT3G22950 94.915 59 3 0 1 59 1 59 6.24e-33 119
MsG0180004291.01.T01 AT3G22950 86.325 117 16 0 165 281 65 181 2.07e-70 215
MsG0180004291.01.T01 AT3G22950 94.915 59 3 0 1 59 1 59 6.24e-33 119
MsG0180004291.01.T01 AT1G70490 49.573 117 59 0 165 281 65 181 5.80e-39 135
MsG0180004291.01.T01 AT1G70490 56.667 60 26 0 1 60 1 60 3.08e-14 69.7
MsG0180004291.01.T01 AT1G70490 49.573 117 59 0 165 281 65 181 5.80e-39 135
MsG0180004291.01.T01 AT1G70490 56.667 60 26 0 1 60 1 60 3.08e-14 69.7
MsG0180004291.01.T01 AT1G70490 49.573 117 59 0 165 281 65 181 5.80e-39 135
MsG0180004291.01.T01 AT1G70490 56.667 60 26 0 1 60 1 60 3.08e-14 69.7
MsG0180004291.01.T01 AT1G70490 49.573 117 59 0 165 281 65 181 5.80e-39 135
MsG0180004291.01.T01 AT1G70490 56.667 60 26 0 1 60 1 60 3.08e-14 69.7
MsG0180004291.01.T01 AT1G70490 49.573 117 59 0 165 281 65 181 5.80e-39 135
MsG0180004291.01.T01 AT1G70490 56.667 60 26 0 1 60 1 60 3.08e-14 69.7
MsG0180004291.01.T01 AT1G70490 49.573 117 59 0 165 281 65 181 5.80e-39 135
MsG0180004291.01.T01 AT1G70490 56.667 60 26 0 1 60 1 60 3.08e-14 69.7
MsG0180004291.01.T01 AT1G23490 49.573 117 59 0 165 281 65 181 5.80e-39 135
MsG0180004291.01.T01 AT1G23490 56.667 60 26 0 1 60 1 60 3.08e-14 69.7
MsG0180004291.01.T01 AT1G70490 49.573 117 59 0 165 281 65 181 5.80e-39 135
MsG0180004291.01.T01 AT1G70490 56.667 60 26 0 1 60 1 60 3.08e-14 69.7
MsG0180004291.01.T01 AT3G62290 48.718 117 60 0 165 281 65 181 3.47e-38 133
MsG0180004291.01.T01 AT3G62290 56.667 60 26 0 1 60 1 60 6.16e-14 68.9
MsG0180004291.01.T01 AT3G62290 48.718 117 60 0 165 281 65 181 3.47e-38 133
MsG0180004291.01.T01 AT3G62290 56.667 60 26 0 1 60 1 60 6.16e-14 68.9
MsG0180004291.01.T01 AT3G62290 48.718 117 60 0 165 281 65 181 3.47e-38 133
MsG0180004291.01.T01 AT3G62290 56.667 60 26 0 1 60 1 60 6.16e-14 68.9
MsG0180004291.01.T01 AT1G10630 48.718 117 60 0 165 281 65 181 4.59e-38 132
MsG0180004291.01.T01 AT1G10630 56.667 60 26 0 1 60 1 60 2.96e-14 69.7
MsG0180004291.01.T01 AT1G10630 48.718 117 60 0 165 281 65 181 4.59e-38 132
MsG0180004291.01.T01 AT1G10630 56.667 60 26 0 1 60 1 60 2.96e-14 69.7
MsG0180004291.01.T01 AT2G47170 48.718 117 60 0 165 281 65 181 4.79e-38 132
MsG0180004291.01.T01 AT2G47170 56.667 60 26 0 1 60 1 60 5.63e-14 68.9
MsG0180004291.01.T01 AT2G47170 48.718 117 60 0 165 281 65 181 4.79e-38 132
MsG0180004291.01.T01 AT2G47170 56.667 60 26 0 1 60 1 60 5.63e-14 68.9
MsG0180004291.01.T01 AT2G47170 48.718 117 60 0 165 281 65 181 4.79e-38 132
MsG0180004291.01.T01 AT2G47170 56.667 60 26 0 1 60 1 60 5.63e-14 68.9
MsG0180004291.01.T01 AT5G14670 48.718 117 60 0 165 281 65 181 5.87e-38 132
MsG0180004291.01.T01 AT5G14670 56.667 60 26 0 1 60 1 60 3.84e-14 69.7
MsG0180004291.01.T01 AT5G14670 48.718 117 60 0 165 281 65 181 5.87e-38 132
MsG0180004291.01.T01 AT5G14670 56.667 60 26 0 1 60 1 60 3.84e-14 69.7
MsG0180004291.01.T01 AT5G14670 47.863 117 61 0 165 281 65 181 2.00e-37 131
MsG0180004291.01.T01 AT5G14670 56.667 60 26 0 1 60 1 60 5.41e-14 69.3
MsG0180004291.01.T01 AT5G17060 48.182 110 57 0 165 274 65 174 2.36e-32 118
MsG0180004291.01.T01 AT5G17060 50.000 60 30 0 1 60 1 60 7.76e-13 66.2
MsG0180004291.01.T01 AT5G17060 48.182 110 57 0 165 274 65 174 2.36e-32 118
MsG0180004291.01.T01 AT5G17060 50.000 60 30 0 1 60 1 60 7.76e-13 66.2
MsG0180004291.01.T01 AT3G03120 47.899 119 60 1 156 274 58 174 3.17e-32 118
MsG0180004291.01.T01 AT3G03120 50.000 60 30 0 1 60 1 60 7.53e-13 66.2
MsG0180004291.01.T01 AT2G15310 44.828 116 64 0 165 280 65 180 4.33e-32 118
MsG0180004291.01.T01 AT2G15310 53.226 62 29 0 1 62 1 62 2.68e-13 67.8
MsG0180004291.01.T01 AT2G24765 46.364 110 59 0 165 274 65 174 2.54e-30 112
MsG0180004291.01.T01 AT2G24765 53.333 60 28 0 1 60 1 60 5.24e-14 69.3
MsG0180004291.01.T01 AT2G18390 41.880 117 67 1 165 280 64 180 3.21e-25 99.4
MsG0180004291.01.T01 AT5G52210 36.607 112 71 0 164 275 71 182 8.20e-20 85.5
MsG0180004291.01.T01 AT5G52210 36.607 112 71 0 164 275 71 182 8.20e-20 85.5
MsG0180004291.01.T01 AT5G37680 34.862 109 68 1 165 270 21 129 3.12e-16 74.3
MsG0180004291.01.T01 AT5G37680 38.636 88 54 0 165 252 68 155 9.87e-16 73.9
MsG0180004291.01.T01 AT1G02430 35.294 119 64 4 166 273 67 183 2.76e-15 72.8
MsG0180004291.01.T01 AT2G24765 50.000 64 32 0 165 228 65 128 3.32e-15 71.2
MsG0180004291.01.T01 AT2G24765 54.237 59 27 0 1 59 1 59 2.84e-14 68.9
MsG0180004291.01.T01 AT1G02440 32.773 119 67 4 166 273 67 183 5.47e-15 72.0
MsG0180004291.01.T01 AT3G03120 48.000 75 37 1 156 230 58 130 5.34e-14 68.2
MsG0180004291.01.T01 AT3G03120 50.000 60 30 0 1 60 1 60 2.70e-13 66.2
MsG0180004291.01.T01 AT3G49870 37.500 88 55 0 165 252 49 136 6.71e-14 68.6
MsG0180004291.01.T01 AT5G67560 37.500 88 55 0 165 252 68 155 9.25e-14 68.6
MsG0180004291.01.T01 AT3G49870 37.500 88 55 0 165 252 68 155 9.63e-14 68.6
MsG0180004291.01.T01 AT3G49860 34.091 88 58 0 165 252 60 147 2.67e-12 64.3

Find 92 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTAGTTATTAATTAATT+TGG 0.073843 1:+76161256 MsG0180004291.01.T01:five_prime_UTR
GATAGTTGTAGTTGATTAAA+AGG 0.099548 1:+76161285 MsG0180004291.01.T01:five_prime_UTR
CCGATTTGATTTGGCGATTT+GGG 0.232061 1:-76161036 None:intergenic
GGCTTCTTTCTATAACAATT+TGG 0.253823 1:-76166855 None:intergenic
CACAAAGAGAATTGAGTATT+TGG 0.257469 1:+76164246 MsG0180004291.01.T01:CDS
ACCGATTTGATTTGGCGATT+TGG 0.267331 1:-76161037 None:intergenic
ATTCTCTTTGTGATAGTCAT+TGG 0.315670 1:-76164235 None:intergenic
TCATTTCAGGTCTGGGATCT+TGG 0.315908 1:+76166317 MsG0180004291.01.T01:intron
GAAATTAATGCTTTGAAAAT+CGG 0.322803 1:-76165576 None:intergenic
GAATGAACACCGATTTGATT+TGG 0.333185 1:-76161045 None:intergenic
AATTAGTTATTAATTAATTT+GGG 0.343296 1:+76161257 MsG0180004291.01.T01:five_prime_UTR
ACACTTGAGTGTAAGATCTA+TGG 0.344511 1:+76161887 MsG0180004291.01.T01:CDS
AGCTTCAGTGGTTTGATCTC+TGG 0.346318 1:+76165552 MsG0180004291.01.T01:CDS
TATAGGATAAATAGTGTTAT+AGG 0.366814 1:+76161827 MsG0180004291.01.T01:CDS
GATGGTCTTGGATGGATTGC+CGG 0.370902 1:+76166635 MsG0180004291.01.T01:CDS
GAGTATAAGATTGTTGTTGT+TGG 0.394215 1:+76161360 MsG0180004291.01.T01:CDS
ACTCTTTATAAATTGCATCT+TGG 0.394363 1:+76161408 MsG0180004291.01.T01:CDS
TAACCATCAGGGAGAAGAAT+TGG 0.401498 1:+76161804 MsG0180004291.01.T01:intron
TGGATTGCCGGGCGAGTAAC+CGG 0.406341 1:+76166647 MsG0180004291.01.T01:CDS
TGCTTTGCCGGTTACTCGCC+CGG 0.406522 1:-76166654 None:intergenic
GTTGCGATTGCGAAGAGAAT+TGG 0.416440 1:-76161067 None:intergenic
ACAATCTTATACTCTTTAGC+AGG 0.426577 1:-76161351 None:intergenic
GACGGCCTTTATGATGGTCT+TGG 0.432233 1:+76166623 MsG0180004291.01.T01:CDS
CAAGCTTGCAGCGCCCTCTC+AGG 0.432795 1:+76166599 MsG0180004291.01.T01:CDS
AAACCCACATCATGCTTTGC+CGG 0.443216 1:-76166666 None:intergenic
GGGCAATGATGTCTAGATTC+TGG 0.443324 1:+76161316 MsG0180004291.01.T01:CDS
TAAGATTGTTGTTGTTGGAT+TGG 0.448953 1:+76161365 MsG0180004291.01.T01:CDS
CAAAGACAAGGAGGAAACTA+TGG 0.458196 1:+76161856 MsG0180004291.01.T01:CDS
ATCCTTCATTAAAGAGATCC+TGG 0.463726 1:-76166426 None:intergenic
ATAGTTGTAGTTGATTAAAA+GGG 0.463809 1:+76161286 MsG0180004291.01.T01:five_prime_UTR
TCCATCCAAGACCATCATAA+AGG 0.464813 1:-76166628 None:intergenic
GTGTAAGATCTATGGTTTGT+TGG 0.468654 1:+76161895 MsG0180004291.01.T01:CDS
AAAGCATGATGTGGGTTTGC+TGG 0.470420 1:+76166671 MsG0180004291.01.T01:exon
GAGACCCTTTGATATACCTC+AGG 0.476435 1:+76164195 MsG0180004291.01.T01:CDS
TGCTAATAAACAAGATATCA+AGG 0.484675 1:+76166505 MsG0180004291.01.T01:CDS
CCCAAATCGCCAAATCAAAT+CGG 0.492653 1:+76161036 MsG0180004291.01.T01:five_prime_UTR
GCCTTTATGATGGTCTTGGA+TGG 0.493098 1:+76166627 MsG0180004291.01.T01:CDS
ACCCTTTGTCATCATTGTTG+TGG 0.495739 1:-76164270 None:intergenic
TAGTTGATTAAAAGGGAGGA+TGG 0.496304 1:+76161293 MsG0180004291.01.T01:exon
AATATGTTGCCCATGATGTC+CGG 0.496677 1:-76166355 None:intergenic
TCTACAAAACATTCGATTCG+AGG 0.499454 1:+76161481 MsG0180004291.01.T01:CDS
TCAGGGAGAAGAATTGGTAT+AGG 0.501908 1:+76161810 MsG0180004291.01.T01:intron
AAGAAAGACTCCGGACATCA+TGG 0.503977 1:+76166345 MsG0180004291.01.T01:CDS
GTTGATTAAAAGGGAGGATG+GGG 0.505474 1:+76161295 MsG0180004291.01.T01:exon
ACAGCATCAAGGATCATGAT+TGG 0.511844 1:+76166570 MsG0180004291.01.T01:CDS
TTTCAGGTCTGGGATCTTGG+CGG 0.512294 1:+76166320 MsG0180004291.01.T01:intron
ATGGTCTTGGATGGATTGCC+GGG 0.515323 1:+76166636 MsG0180004291.01.T01:CDS
AATTCATACACACACTAGCC+TGG 0.526989 1:-76166782 None:intergenic
AGAGCATCAGTGATTTCAGC+AGG 0.529085 1:-76166539 None:intergenic
TCAGGAGACGGCCTTTATGA+TGG 0.533539 1:+76166617 MsG0180004291.01.T01:CDS
GGTATATCAAAGGGTCTCAA+AGG 0.535916 1:-76164190 None:intergenic
CACAGACAACGCTACCTCCC+AGG 0.538657 1:+76161089 MsG0180004291.01.T01:five_prime_UTR
TGCAGCGCCCTCTCAGGAGA+CGG 0.539815 1:+76166605 MsG0180004291.01.T01:CDS
TTATAAATTGCATCTTGGTG+AGG 0.541529 1:+76161413 MsG0180004291.01.T01:CDS
AGCCAGGATCTCTTTAATGA+AGG 0.547926 1:+76166424 MsG0180004291.01.T01:CDS
GTTGTAGTTGATTAAAAGGG+AGG 0.548123 1:+76161289 MsG0180004291.01.T01:five_prime_UTR
TCGACGTTGCTACCAACAGT+AGG 0.548630 1:-76161450 None:intergenic
TGTGGGTTTGCTGGAAACTA+AGG 0.552981 1:+76166680 MsG0180004291.01.T01:three_prime_UTR
AGTTGATTAAAAGGGAGGAT+GGG 0.553148 1:+76161294 MsG0180004291.01.T01:exon
GTATATCAAAGGGTCTCAAA+GGG 0.554769 1:-76164189 None:intergenic
GAATCCTGAGGTATATCAAA+GGG 0.556143 1:-76164199 None:intergenic
TCGACAGCAGTGATAGAGCC+AGG 0.557461 1:+76166408 MsG0180004291.01.T01:CDS
CATAAAGGCCGTCTCCTGAG+AGG 0.561891 1:-76166613 None:intergenic
TCCACAACAATGATGACAAA+GGG 0.562921 1:+76164269 MsG0180004291.01.T01:CDS
CTTGTTTATTAGCAAAGACA+AGG 0.566607 1:-76166496 None:intergenic
ATATTTCAAAGAATCAAGCC+AGG 0.572391 1:+76166764 MsG0180004291.01.T01:three_prime_UTR
TCAAAGGGTCTCAAAGGGAA+AGG 0.574343 1:-76164184 None:intergenic
CAATTACAGCATGAGTTCCT+CGG 0.575990 1:-76166379 None:intergenic
CCTCTGCATTGCATGCACCT+TGG 0.577104 1:+76166876 MsG0180004291.01.T01:three_prime_UTR
TCTGTCACTTCACAGCATCA+AGG 0.579384 1:+76166559 MsG0180004291.01.T01:CDS
AAGATGCAATTTATAAAGAG+TGG 0.580200 1:-76161406 None:intergenic
TTGATTAAAAGGGAGGATGG+GGG 0.584384 1:+76161296 MsG0180004291.01.T01:exon
ACTTTGTTGTCAGGGTGACA+TGG 0.588053 1:+76161922 MsG0180004291.01.T01:CDS
TCATGATCCAGAAGCTTCAG+TGG 0.588675 1:+76165540 MsG0180004291.01.T01:intron
AGAAAGACTCCGGACATCAT+GGG 0.590125 1:+76166346 MsG0180004291.01.T01:CDS
ATAAAGGCCGTCTCCTGAGA+GGG 0.592089 1:-76166612 None:intergenic
TGAATCCTGAGGTATATCAA+AGG 0.594548 1:-76164200 None:intergenic
CGACGTTGCTACCAACAGTA+GGG 0.595721 1:-76161449 None:intergenic
GTTACTACTAACCCTACTGT+TGG 0.624128 1:+76161438 MsG0180004291.01.T01:CDS
TTGGCGGACAAGAAAGACTC+CGG 0.636413 1:+76166336 MsG0180004291.01.T01:CDS
TAACCGGCAAAGCATGATGT+GGG 0.639528 1:+76166663 MsG0180004291.01.T01:exon
GTCCACAACAATGATGACAA+AGG 0.643267 1:+76164268 MsG0180004291.01.T01:CDS
CAATCTTATACTCTTTAGCA+GGG 0.643634 1:-76161350 None:intergenic
GTAACCGGCAAAGCATGATG+TGG 0.646220 1:+76166662 MsG0180004291.01.T01:exon
CCAAGGTGCATGCAATGCAG+AGG 0.647435 1:-76166876 None:intergenic
GTTGTTGGATTGGATAACGC+TGG 0.661294 1:+76161375 MsG0180004291.01.T01:CDS
ATGCAATAGCTTGAATCCTG+AGG 0.676977 1:-76164211 None:intergenic
TATAGGCGGTGACAAAGACA+AGG 0.693956 1:+76161844 MsG0180004291.01.T01:CDS
AGGATAAATAGTGTTATAGG+CGG 0.694898 1:+76161830 MsG0180004291.01.T01:CDS
AGAAAAGGATCGAACCTGGG+AGG 0.724445 1:-76161103 None:intergenic
AGGCGGTGACAAAGACAAGG+AGG 0.725339 1:+76161847 MsG0180004291.01.T01:CDS
TCATGGGCAACATATTACCG+AGG 0.738917 1:+76166362 MsG0180004291.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTAATTTAATTGATATAA+TGG - Chr1:76163565-76163584 None:intergenic 10.0%
!! AAATTGTACTTAGAATTTAT+AGG - Chr1:76162840-76162859 None:intergenic 15.0%
!! AAGAAAATAGAAGATTAAAT+GGG + Chr1:76162730-76162749 MsG0180004291.01.T01:intron 15.0%
!! AATTTACTATAGTAGTAAAA+TGG - Chr1:76164643-76164662 None:intergenic 15.0%
!! ACATAAGTTAAAAGAAAAAT+TGG + Chr1:76161704-76161723 MsG0180004291.01.T01:intron 15.0%
!! ACATAATCAAATGAATTAAT+CGG - Chr1:76161214-76161233 None:intergenic 15.0%
!! ATATTCATATTTACTTCAAT+AGG + Chr1:76163774-76163793 MsG0180004291.01.T01:intron 15.0%
!! GAATATACAAGATAATTATA+AGG + Chr1:76161726-76161745 MsG0180004291.01.T01:intron 15.0%
!! TAAGAAAATAGAAGATTAAA+TGG + Chr1:76162729-76162748 MsG0180004291.01.T01:intron 15.0%
!!! AAAATTTAGGTTGAAAAAAA+TGG - Chr1:76165886-76165905 None:intergenic 15.0%
!! AAAATCATAAAAACAAACTC+TGG + Chr1:76163294-76163313 MsG0180004291.01.T01:intron 20.0%
!! AATGATTCAACTCAATTAAT+TGG - Chr1:76165170-76165189 None:intergenic 20.0%
!! ACATCTTATGTAAATTCTAA+TGG - Chr1:76163091-76163110 None:intergenic 20.0%
!! ATAGCAAAAATGATGATAAA+GGG - Chr1:76161513-76161532 None:intergenic 20.0%
!! ATAGTTGTAGTTGATTAAAA+GGG + Chr1:76161286-76161305 MsG0180004291.01.T01:five_prime_UTR 20.0%
!! ATGATTCAACTCAATTAATT+GGG - Chr1:76165169-76165188 None:intergenic 20.0%
!! TATAGCAAAAATGATGATAA+AGG - Chr1:76161514-76161533 None:intergenic 20.0%
!! TATAGGATAAATAGTGTTAT+AGG + Chr1:76161827-76161846 MsG0180004291.01.T01:CDS 20.0%
!! TATGTCATGATATTAGTATT+AGG + Chr1:76164379-76164398 MsG0180004291.01.T01:intron 20.0%
!! TTAATTTATTTGTTCAACCT+GGG - Chr1:76165062-76165081 None:intergenic 20.0%
!! TTACTACATTTGAACTTATT+TGG - Chr1:76164005-76164024 None:intergenic 20.0%
!!! AATTTTGTTAGGAAAAAATG+TGG - Chr1:76164880-76164899 None:intergenic 20.0%
!!! ATGTGTTTTTAAACTACATT+TGG + Chr1:76166231-76166250 MsG0180004291.01.T01:intron 20.0%
!!! ATTTTAATTATTTTTCCCCT+TGG - Chr1:76164845-76164864 None:intergenic 20.0%
!!! ATTTTGTTAGGAAAAAATGT+GGG - Chr1:76164879-76164898 None:intergenic 20.0%
!!! GAAATTAATGCTTTGAAAAT+CGG - Chr1:76165579-76165598 None:intergenic 20.0%
!!! GTACCATTTAAATTTTCTTA+GGG + Chr1:76165706-76165725 MsG0180004291.01.T01:intron 20.0%
! AAAGAAAGACAACTTTAGAT+TGG - Chr1:76162318-76162337 None:intergenic 25.0%
! AAAGGTTGTTCCTTTATATT+TGG + Chr1:76161767-76161786 MsG0180004291.01.T01:intron 25.0%
! AAGATGCAATTTATAAAGAG+TGG - Chr1:76161409-76161428 None:intergenic 25.0%
! AAGTAGCGTAATAGATTAAT+TGG - Chr1:76162925-76162944 None:intergenic 25.0%
! AATTAATCTATTACGCTACT+TGG + Chr1:76162924-76162943 MsG0180004291.01.T01:intron 25.0%
! AATTTGATTGCTAGAATAGT+TGG + Chr1:76162279-76162298 MsG0180004291.01.T01:intron 25.0%
! ACCTTATTGATAGAAGTTAA+GGG + Chr1:76162357-76162376 MsG0180004291.01.T01:intron 25.0%
! ACTCTTTATAAATTGCATCT+TGG + Chr1:76161408-76161427 MsG0180004291.01.T01:CDS 25.0%
! ACTGAGTACTAAATTAGAAA+AGG - Chr1:76166180-76166199 None:intergenic 25.0%
! AGTAGCGTAATAGATTAATT+GGG - Chr1:76162924-76162943 None:intergenic 25.0%
! AGTTATTCATGATCATGATA+TGG + Chr1:76164545-76164564 MsG0180004291.01.T01:intron 25.0%
! ATAATAATAAAAATTGGGGG+TGG + Chr1:76160936-76160955 MsG0180004291.01.T01:five_prime_UTR 25.0%
! ATACTATATTTATTCCAACG+TGG - Chr1:76163190-76163209 None:intergenic 25.0%
! ATTAGCAATATTCAGATTCT+AGG + Chr1:76164660-76164679 MsG0180004291.01.T01:intron 25.0%
! CAAATATTAGCGTTCATATT+TGG + Chr1:76161649-76161668 MsG0180004291.01.T01:intron 25.0%
! CTTAATTTATTTGTTCAACC+TGG - Chr1:76165063-76165082 None:intergenic 25.0%
! CTTACACATTAACATGAATT+GGG + Chr1:76162509-76162528 MsG0180004291.01.T01:intron 25.0%
! GATAGTTGTAGTTGATTAAA+AGG + Chr1:76161285-76161304 MsG0180004291.01.T01:five_prime_UTR 25.0%
! TACTAATATCATGACATATC+AGG - Chr1:76164377-76164396 None:intergenic 25.0%
! TACTGAAGAAATTAAGATCA+AGG + Chr1:76165137-76165156 MsG0180004291.01.T01:intron 25.0%
! TAGCCCTAAGAAAATTTAAA+TGG - Chr1:76165712-76165731 None:intergenic 25.0%
! TGACAAATATAATCACATTG+TGG - Chr1:76162154-76162173 None:intergenic 25.0%
! TGATTCAACTCAATTAATTG+GGG - Chr1:76165168-76165187 None:intergenic 25.0%
! TGCATATTTAAATGCAGATT+GGG - Chr1:76164128-76164147 None:intergenic 25.0%
! TGCTAATAAACAAGATATCA+AGG + Chr1:76166505-76166524 MsG0180004291.01.T01:CDS 25.0%
! TTAAAGTGAGTAGAATTTGT+TGG + Chr1:76165258-76165277 MsG0180004291.01.T01:intron 25.0%
! TTGCATATTTAAATGCAGAT+TGG - Chr1:76164129-76164148 None:intergenic 25.0%
! TTTAAAAACACATGCATACA+TGG - Chr1:76166224-76166243 None:intergenic 25.0%
! TTTACATATTGCATCCAATA+TGG - Chr1:76163330-76163349 None:intergenic 25.0%
!! AAAGATCAGAATTGTTACTT+CGG - Chr1:76164475-76164494 None:intergenic 25.0%
!! ATCACTGTTAAATTTTGCTA+CGG + Chr1:76165088-76165107 MsG0180004291.01.T01:intron 25.0%
!! GGTACCATTTAAATTTTCTT+AGG + Chr1:76165705-76165724 MsG0180004291.01.T01:intron 25.0%
!! TAGATAGTTCTTCTTTTCTT+CGG + Chr1:76160989-76161008 MsG0180004291.01.T01:five_prime_UTR 25.0%
!! TCATGATTTAATTGGTTCAA+CGG - Chr1:76165526-76165545 None:intergenic 25.0%
!! TTGTTGATCAAAGTTTTCAT+TGG + Chr1:76161593-76161612 MsG0180004291.01.T01:intron 25.0%
!! TTTTTACCATTGAACTGTTT+TGG + Chr1:76162201-76162220 MsG0180004291.01.T01:intron 25.0%
!!! AAATATGCTTGATATTTTGG+AGG - Chr1:76164447-76164466 None:intergenic 25.0%
!!! GTGCTGATTAGAAAAAATTT+AGG - Chr1:76165899-76165918 None:intergenic 25.0%
!!! TCTAAAGTTGTCTTTCTTTT+TGG + Chr1:76162319-76162338 MsG0180004291.01.T01:intron 25.0%
AAAAATGACCACCAAATGTT+TGG - Chr1:76165412-76165431 None:intergenic 30.0%
AAAATGACCACCAAATGTTT+GGG - Chr1:76165411-76165430 None:intergenic 30.0%
AAAATGCACATCTCCATATT+AGG - Chr1:76162415-76162434 None:intergenic 30.0%
AAATGCACATCTCCATATTA+GGG - Chr1:76162414-76162433 None:intergenic 30.0%
AACATTGGTAAAAATTGTCC+AGG - Chr1:76164702-76164721 None:intergenic 30.0%
AAGACTAAGAGAAAGTAAAG+AGG - Chr1:76163253-76163272 None:intergenic 30.0%
AATATCATGACATATCAGGA+GGG - Chr1:76164373-76164392 None:intergenic 30.0%
ACAATCTTATACTCTTTAGC+AGG - Chr1:76161354-76161373 None:intergenic 30.0%
ACCACAACAACCAAATATAA+AGG - Chr1:76161780-76161799 None:intergenic 30.0%
AGACTAAGAGAAAGTAAAGA+GGG - Chr1:76163252-76163271 None:intergenic 30.0%
AGGATAAATAGTGTTATAGG+CGG + Chr1:76161830-76161849 MsG0180004291.01.T01:CDS 30.0%
ATATAATACAGCAAGAGAGT+TGG - Chr1:76162793-76162812 None:intergenic 30.0%
ATATGTAAATGTAAGGCTAC+TGG + Chr1:76163341-76163360 MsG0180004291.01.T01:intron 30.0%
ATATTTCAAAGAATCAAGCC+AGG + Chr1:76166764-76166783 MsG0180004291.01.T01:three_prime_UTR 30.0%
ATGGCAATCTAATATGATTC+AGG - Chr1:76164624-76164643 None:intergenic 30.0%
ATTAGTTGAACTTAGTTGTG+TGG + Chr1:76162037-76162056 MsG0180004291.01.T01:intron 30.0%
ATTATGTGATTATTCGCTTC+AGG + Chr1:76161227-76161246 MsG0180004291.01.T01:intron 30.0%
ATTCTCTTTGTGATAGTCAT+TGG - Chr1:76164238-76164257 None:intergenic 30.0%
ATTGATCTGAACCAAAAACA+GGG + Chr1:76163208-76163227 MsG0180004291.01.T01:intron 30.0%
CAATCTTATACTCTTTAGCA+GGG - Chr1:76161353-76161372 None:intergenic 30.0%
CACAAAGAGAATTGAGTATT+TGG + Chr1:76164246-76164265 MsG0180004291.01.T01:CDS 30.0%
CACCTTATTGATAGAAGTTA+AGG + Chr1:76162356-76162375 MsG0180004291.01.T01:intron 30.0%
CCTTATTGATAGAAGTTAAG+GGG + Chr1:76162358-76162377 MsG0180004291.01.T01:intron 30.0%
CTTCTGGATCATGATTTAAT+TGG - Chr1:76165534-76165553 None:intergenic 30.0%
CTTGTTTATTAGCAAAGACA+AGG - Chr1:76166499-76166518 None:intergenic 30.0%
CTTTAAATCACAGCTAAAAC+AGG - Chr1:76165244-76165263 None:intergenic 30.0%
GAGAGAGAATCTAATTTCAT+GGG - Chr1:76164079-76164098 None:intergenic 30.0%
GATTCAACTCAATTAATTGG+GGG - Chr1:76165167-76165186 None:intergenic 30.0%
GCTTACACATTAACATGAAT+TGG + Chr1:76162508-76162527 MsG0180004291.01.T01:intron 30.0%
GCTTAGGCCTTAAAAAAATT+TGG - Chr1:76163430-76163449 None:intergenic 30.0%
GCTTATTGGAATACATTGTT+GGG + Chr1:76166082-76166101 MsG0180004291.01.T01:intron 30.0%
GGATGCAATATGTAAATGTA+AGG + Chr1:76163334-76163353 MsG0180004291.01.T01:intron 30.0%
GGCTTCTTTCTATAACAATT+TGG - Chr1:76166858-76166877 None:intergenic 30.0%
TAATATCATGACATATCAGG+AGG - Chr1:76164374-76164393 None:intergenic 30.0%
TAGAAAAGGATAATGCTTAC+TGG - Chr1:76166166-76166185 None:intergenic 30.0%
TAGATGTAAGTCCTTAAAGA+CGG - Chr1:76162100-76162119 None:intergenic 30.0%
TATTGATCTGAACCAAAAAC+AGG + Chr1:76163207-76163226 MsG0180004291.01.T01:intron 30.0%
TCATATTTACTTCAATAGGC+CGG + Chr1:76163778-76163797 MsG0180004291.01.T01:intron 30.0%
TCCACAAAATTAAAGATGCT+GGG - Chr1:76162465-76162484 None:intergenic 30.0%
TCCTTTATATTTGGTTGTTG+TGG + Chr1:76161776-76161795 MsG0180004291.01.T01:intron 30.0%
TCGAATTTGTCATTCATTTC+AGG + Chr1:76166304-76166323 MsG0180004291.01.T01:intron 30.0%
TCTCTATTTAAGAAAAAGCC+TGG + Chr1:76163882-76163901 MsG0180004291.01.T01:intron 30.0%
TGCTTATTGGAATACATTGT+TGG + Chr1:76166081-76166100 MsG0180004291.01.T01:intron 30.0%
TGGCAATCTAATATGATTCA+GGG - Chr1:76164623-76164642 None:intergenic 30.0%
TTATAAATTGCATCTTGGTG+AGG + Chr1:76161413-76161432 MsG0180004291.01.T01:CDS 30.0%
TTGTGCAAAATAGTAAAGCT+AGG - Chr1:76166269-76166288 None:intergenic 30.0%
TTTAAGGACTTACATCTAGA+GGG + Chr1:76162102-76162121 MsG0180004291.01.T01:intron 30.0%
TTTCTAACTAGCTGTTTAGA+TGG - Chr1:76164783-76164802 None:intergenic 30.0%
! AGAAGCCTATTTAGCTTAAA+AGG - Chr1:76163846-76163865 None:intergenic 30.0%
! GAGTATAAGATTGTTGTTGT+TGG + Chr1:76161360-76161379 MsG0180004291.01.T01:CDS 30.0%
! GGGAAATATGCTTGATATTT+TGG - Chr1:76164450-76164469 None:intergenic 30.0%
! GTTGAATCATTGATAGTTGA+AGG + Chr1:76165179-76165198 MsG0180004291.01.T01:intron 30.0%
! TAAGATTGTTGTTGTTGGAT+TGG + Chr1:76161365-76161384 MsG0180004291.01.T01:CDS 30.0%
! TAATATGGAGATGTGCATTT+TGG + Chr1:76162414-76162433 MsG0180004291.01.T01:intron 30.0%
! TAATGAAGGATGAACTTTTC+AGG + Chr1:76166438-76166457 MsG0180004291.01.T01:CDS 30.0%
! TATCAATAAGGTGTTCTCAA+TGG - Chr1:76162349-76162368 None:intergenic 30.0%
! TTTTATGATTTTTCCTCGCA+AGG - Chr1:76163286-76163305 None:intergenic 30.0%
! TTTTTAAACTACATTTGGCG+CGG + Chr1:76166236-76166255 MsG0180004291.01.T01:intron 30.0%
!! GACACTTTCTTTTTGAAGAA+CGG - Chr1:76162132-76162151 None:intergenic 30.0%
!! GGCTTTTTCTTAAATAGAGA+AGG - Chr1:76163882-76163901 None:intergenic 30.0%
!!! ATTTGGTGGTCATTTTTTAG+TGG + Chr1:76165415-76165434 MsG0180004291.01.T01:intron 30.0%
!!! TTAGGGGATATTTTGTTTTG+TGG + Chr1:76165320-76165339 MsG0180004291.01.T01:intron 30.0%
!!! TTCATTGCATTTTTTCAGCT+TGG - Chr1:76165443-76165462 None:intergenic 30.0%
!!! TTGGTTTTACTTTGTTGTCA+GGG + Chr1:76161914-76161933 MsG0180004291.01.T01:CDS 30.0%
!!! TTTGGTGGTCATTTTTTAGT+GGG + Chr1:76165416-76165435 MsG0180004291.01.T01:intron 30.0%
AAGAACCAAGATTTGTAGCA+TGG - Chr1:76164980-76164999 None:intergenic 35.0%
AATATGCAACATTATCAGCG+TGG + Chr1:76164140-76164159 MsG0180004291.01.T01:intron 35.0%
ACACTTGAGTGTAAGATCTA+TGG + Chr1:76161887-76161906 MsG0180004291.01.T01:CDS 35.0%
ACCAACATCATTTGGATTGA+TGG - Chr1:76162592-76162611 None:intergenic 35.0%
ACCATCAATCCAAATGATGT+TGG + Chr1:76162588-76162607 MsG0180004291.01.T01:intron 35.0%
ACTATAGCAGCAATGAAGAT+TGG - Chr1:76162063-76162082 None:intergenic 35.0%
AGATTATGCTGTAAGCTCAT+TGG - Chr1:76164418-76164437 None:intergenic 35.0%
AGATTGCTACCAACATCATT+TGG - Chr1:76162600-76162619 None:intergenic 35.0%
AGCGTAATAGATTAATTGGG+TGG - Chr1:76162921-76162940 None:intergenic 35.0%
AGGCCTTAAAAAAATTTGGC+AGG - Chr1:76163426-76163445 None:intergenic 35.0%
AGTGGATCAGCAATAAAAGA+TGG + Chr1:76162698-76162717 MsG0180004291.01.T01:intron 35.0%
AGTTGATTAAAAGGGAGGAT+GGG + Chr1:76161294-76161313 MsG0180004291.01.T01:exon 35.0%
ATATCATGACATATCAGGAG+GGG - Chr1:76164372-76164391 None:intergenic 35.0%
ATCATGGTGTGAAAACTATG+TGG - Chr1:76165030-76165049 None:intergenic 35.0%
ATCCTTCATTAAAGAGATCC+TGG - Chr1:76166429-76166448 None:intergenic 35.0%
ATGATTAGAATCATGAGCAG+TGG + Chr1:76161964-76161983 MsG0180004291.01.T01:intron 35.0%
ATGTAGTAAGATCCATATCC+CGG + Chr1:76164016-76164035 MsG0180004291.01.T01:intron 35.0%
ATTGCTAGATCTAGTGAAAC+CGG - Chr1:76164038-76164057 None:intergenic 35.0%
ATTGTTGTCGTAGTTAGGTT+AGG + Chr1:76165286-76165305 MsG0180004291.01.T01:intron 35.0%
CAGATCGATAGAGAAAGAAA+AGG - Chr1:76161121-76161140 None:intergenic 35.0%
CAGTTCGATCATGAAAACAT+TGG - Chr1:76164717-76164736 None:intergenic 35.0%
CCATGAGAAGATTGTTTATG+AGG - Chr1:76163129-76163148 None:intergenic 35.0%
CCCCTTAACTTCTATCAATA+AGG - Chr1:76162361-76162380 None:intergenic 35.0%
CCTCAAGAAAATATTCTCCA+AGG - Chr1:76162548-76162567 None:intergenic 35.0%
CCTCATAAACAATCTTCTCA+TGG + Chr1:76163126-76163145 MsG0180004291.01.T01:intron 35.0%
CTAAAAAGTAAGCCTATGAC+AGG - Chr1:76163464-76163483 None:intergenic 35.0%
CTCCACAAAATTAAAGATGC+TGG - Chr1:76162466-76162485 None:intergenic 35.0%
GAACGCTAATATTTGCTTGA+GGG - Chr1:76161644-76161663 None:intergenic 35.0%
GAATCCTGAGGTATATCAAA+GGG - Chr1:76164202-76164221 None:intergenic 35.0%
GATCACATTGCTTATTTAGC+AGG - Chr1:76163520-76163539 None:intergenic 35.0%
GATTTATGAGCCCAAACATT+TGG + Chr1:76165398-76165417 MsG0180004291.01.T01:intron 35.0%
GGAGAGAGAATCTAATTTCA+TGG - Chr1:76164080-76164099 None:intergenic 35.0%
GGTACAATATAAGATACCCT+CGG + Chr1:76163030-76163049 MsG0180004291.01.T01:intron 35.0%
GTACAATATAAGATACCCTC+GGG + Chr1:76163031-76163050 MsG0180004291.01.T01:intron 35.0%
GTATATCAAAGGGTCTCAAA+GGG - Chr1:76164192-76164211 None:intergenic 35.0%
GTTGTAGTTGATTAAAAGGG+AGG + Chr1:76161289-76161308 MsG0180004291.01.T01:five_prime_UTR 35.0%
TACTTCTCTTGTAAGAAGCT+TGG + Chr1:76165599-76165618 MsG0180004291.01.T01:intron 35.0%
TAGTTGATTAAAAGGGAGGA+TGG + Chr1:76161293-76161312 MsG0180004291.01.T01:exon 35.0%
TATTTATACAGAGCTGAAGC+TGG - Chr1:76164591-76164610 None:intergenic 35.0%
TCATCTCAAAAGAGACTTGT+TGG + Chr1:76163969-76163988 MsG0180004291.01.T01:intron 35.0%
TCCACAACAATGATGACAAA+GGG + Chr1:76164269-76164288 MsG0180004291.01.T01:CDS 35.0%
TGAACGCTAATATTTGCTTG+AGG - Chr1:76161645-76161664 None:intergenic 35.0%
TGAATCCTGAGGTATATCAA+AGG - Chr1:76164203-76164222 None:intergenic 35.0%
TGATCTTTGCTTGCGTATTT+GGG + Chr1:76164487-76164506 MsG0180004291.01.T01:intron 35.0%
TGGTGAGTGGTAGTAAATAA+AGG - Chr1:76165636-76165655 None:intergenic 35.0%
TTAAAAAAATTTGGCAGGCC+AGG - Chr1:76163421-76163440 None:intergenic 35.0%
TTCTTAAATAGAGAAGGCCT+AGG - Chr1:76163876-76163895 None:intergenic 35.0%
TTGTTGTCGTAGTTAGGTTA+GGG + Chr1:76165287-76165306 MsG0180004291.01.T01:intron 35.0%
TTTATTCCAACGTGGACATA+CGG - Chr1:76163182-76163201 None:intergenic 35.0%
! AACTCATGTGTTGATCGAAA+AGG + Chr1:76161749-76161768 MsG0180004291.01.T01:intron 35.0%
! ATAGGCTTCTAAAAAAGCCT+AGG + Chr1:76163856-76163875 MsG0180004291.01.T01:intron 35.0%
! ATGTTTTCACCAAGTCTCTA+AGG - Chr1:76163057-76163076 None:intergenic 35.0%
! ATTTTGTGGAGTTTAAGTCG+TGG + Chr1:76162475-76162494 MsG0180004291.01.T01:intron 35.0%
! CAGTCTGACGAAATTTTGTT+AGG - Chr1:76164891-76164910 None:intergenic 35.0%
! CCTTGGAGAATATTTTCTTG+AGG + Chr1:76162545-76162564 MsG0180004291.01.T01:intron 35.0%
! CTTTAAGGACTTACATCTAG+AGG + Chr1:76162101-76162120 MsG0180004291.01.T01:intron 35.0%
! GAATAAAGCGTTTATTGCGT+TGG - Chr1:76161160-76161179 None:intergenic 35.0%
! GGGTGTTTCTAAATGAACAT+GGG + Chr1:76165684-76165703 MsG0180004291.01.T01:intron 35.0%
! GTGTAAGATCTATGGTTTGT+TGG + Chr1:76161895-76161914 MsG0180004291.01.T01:CDS 35.0%
! TCTACAAAACATTCGATTCG+AGG + Chr1:76161481-76161500 MsG0180004291.01.T01:CDS 35.0%
! TGGGTGTTTCTAAATGAACA+TGG + Chr1:76165683-76165702 MsG0180004291.01.T01:intron 35.0%
! TTGTCATTCATTTCAGGTCT+GGG + Chr1:76166310-76166329 MsG0180004291.01.T01:intron 35.0%
! TTTGTCATTCATTTCAGGTC+TGG + Chr1:76166309-76166328 MsG0180004291.01.T01:intron 35.0%
!! AATTATTTTTCCCCTTGGAC+AGG - Chr1:76164840-76164859 None:intergenic 35.0%
!! AGTGAGTAGAATTTGTTGGA+TGG + Chr1:76165262-76165281 MsG0180004291.01.T01:intron 35.0%
!! ATAGGCTTCTCTATTTCTGA+TGG - Chr1:76162822-76162841 None:intergenic 35.0%
!! ATGTGTACATTGCTTTTGAG+AGG + Chr1:76162176-76162195 MsG0180004291.01.T01:intron 35.0%
!! CTCGGCTATTATTAACTTGT+AGG - Chr1:76164101-76164120 None:intergenic 35.0%
!! GAATGAACACCGATTTGATT+TGG - Chr1:76161048-76161067 None:intergenic 35.0%
!! TAAGCTCATTGGTTCACATA+CGG - Chr1:76164407-76164426 None:intergenic 35.0%
!! TCCCAGCATCTTTAATTTTG+TGG + Chr1:76162461-76162480 MsG0180004291.01.T01:intron 35.0%
!! TTGTGGTTTGTTAACCATCA+GGG + Chr1:76161793-76161812 MsG0180004291.01.T01:intron 35.0%
!!! AAGTCTCTTTTGAGATGACT+AGG - Chr1:76163967-76163986 None:intergenic 35.0%
!!! AGTCTCTTTTGAGATGACTA+GGG - Chr1:76163966-76163985 None:intergenic 35.0%
!!! ATTTTTTTAAGGCCTAAGCC+TGG + Chr1:76163431-76163450 MsG0180004291.01.T01:intron 35.0%
!!! CTGTCATAGGCTTACTTTTT+AGG + Chr1:76163462-76163481 MsG0180004291.01.T01:intron 35.0%
!!! GTCATACACTTGTTTTGTCT+TGG - Chr1:76162651-76162670 None:intergenic 35.0%
!!! GTTGGTTTTACTTTGTTGTC+AGG + Chr1:76161913-76161932 MsG0180004291.01.T01:CDS 35.0%
!!! TGGCCTGCCAAATTTTTTTA+AGG + Chr1:76163420-76163439 MsG0180004291.01.T01:intron 35.0%
!!! TTGGTGGTCATTTTTTAGTG+GGG + Chr1:76165417-76165436 MsG0180004291.01.T01:intron 35.0%
AAAAGCCTCTTAGGCCTATT+AGG - Chr1:76163804-76163823 None:intergenic 40.0%
AACCAAGATTTGTAGCATGG+AGG - Chr1:76164977-76164996 None:intergenic 40.0%
AAGATCGAAAGCCAAAATCG+TGG - Chr1:76165656-76165675 None:intergenic 40.0%
AAGATTTGTAGCATGGAGGA+AGG - Chr1:76164973-76164992 None:intergenic 40.0%
AAGTGTATGACAGTGTTTCC+AGG + Chr1:76162660-76162679 MsG0180004291.01.T01:intron 40.0%
AATATGTTGCCCATGATGTC+CGG - Chr1:76166358-76166377 None:intergenic 40.0%
AATCATGAGCAGTGGCTATA+GGG + Chr1:76161972-76161991 MsG0180004291.01.T01:intron 40.0%
AATGTCACACTCATCAAGCT+TGG + Chr1:76163009-76163028 MsG0180004291.01.T01:intron 40.0%
AATTCATACACACACTAGCC+TGG - Chr1:76166785-76166804 None:intergenic 40.0%
ACAGCATCAAGGATCATGAT+TGG + Chr1:76166570-76166589 MsG0180004291.01.T01:CDS 40.0%
ACCCTTTGTCATCATTGTTG+TGG - Chr1:76164273-76164292 None:intergenic 40.0%
AGAAAGAAAAGGATCGAACC+TGG - Chr1:76161110-76161129 None:intergenic 40.0%
AGATGAATGGCCTATACCTT+GGG + Chr1:76162233-76162252 MsG0180004291.01.T01:intron 40.0%
AGATTTGTAGCATGGAGGAA+GGG - Chr1:76164972-76164991 None:intergenic 40.0%
AGCCAGGATCTCTTTAATGA+AGG + Chr1:76166424-76166443 MsG0180004291.01.T01:CDS 40.0%
ATACCAATTCTTCTCCCTGA+TGG - Chr1:76161810-76161829 None:intergenic 40.0%
ATGCAATAGCTTGAATCCTG+AGG - Chr1:76164214-76164233 None:intergenic 40.0%
ATGGCATTGTTGTCGTAGTT+AGG + Chr1:76165281-76165300 MsG0180004291.01.T01:intron 40.0%
ATTTAAGAAAAAGCCTGGCC+TGG + Chr1:76163887-76163906 MsG0180004291.01.T01:intron 40.0%
CAAAGACAAGGAGGAAACTA+TGG + Chr1:76161856-76161875 MsG0180004291.01.T01:CDS 40.0%
CAATTACAGCATGAGTTCCT+CGG - Chr1:76166382-76166401 None:intergenic 40.0%
CATACAATAGCGCTGCTTAT+TGG + Chr1:76166068-76166087 MsG0180004291.01.T01:intron 40.0%
CATCTACCATGGTCTGAAAA+GGG + Chr1:76164343-76164362 MsG0180004291.01.T01:intron 40.0%
CCCAAATCGCCAAATCAAAT+CGG + Chr1:76161036-76161055 MsG0180004291.01.T01:five_prime_UTR 40.0%
CGTATTTGGGTCTTTACACT+CGG + Chr1:76164500-76164519 MsG0180004291.01.T01:intron 40.0%
CTGATCTTTGCTTGCGTATT+TGG + Chr1:76164486-76164505 MsG0180004291.01.T01:intron 40.0%
CTGGTCATTGAAGACCATAT+TGG + Chr1:76163313-76163332 MsG0180004291.01.T01:intron 40.0%
GAAAGAAAAGGATCGAACCT+GGG - Chr1:76161109-76161128 None:intergenic 40.0%
GGATCAGTCTATGAGAAAAG+AGG - Chr1:76164166-76164185 None:intergenic 40.0%
GGTAGTCCAAAACAGTTCAA+TGG - Chr1:76162210-76162229 None:intergenic 40.0%
GGTATATCAAAGGGTCTCAA+AGG - Chr1:76164193-76164212 None:intergenic 40.0%
GTCCACAACAATGATGACAA+AGG + Chr1:76164268-76164287 MsG0180004291.01.T01:CDS 40.0%
GTTACTACTAACCCTACTGT+TGG + Chr1:76161438-76161457 MsG0180004291.01.T01:CDS 40.0%
GTTGATCTTGCTTGCTTCTA+GGG + Chr1:76161546-76161565 MsG0180004291.01.T01:intron 40.0%
GTTGATTAAAAGGGAGGATG+GGG + Chr1:76161295-76161314 MsG0180004291.01.T01:exon 40.0%
TAACCATCAGGGAGAAGAAT+TGG + Chr1:76161804-76161823 MsG0180004291.01.T01:intron 40.0%
TAGTTAGGTTAGGGTTGGAT+TGG + Chr1:76165296-76165315 MsG0180004291.01.T01:intron 40.0%
TCAGGGAGAAGAATTGGTAT+AGG + Chr1:76161810-76161829 MsG0180004291.01.T01:intron 40.0%
TCCATCCAAGACCATCATAA+AGG - Chr1:76166631-76166650 None:intergenic 40.0%
TGCTATAGTTGCAACCTGAT+TGG + Chr1:76162074-76162093 MsG0180004291.01.T01:intron 40.0%
TGGGATATTATCAGTCACCT+TGG + Chr1:76162528-76162547 MsG0180004291.01.T01:intron 40.0%
TGTTGATCTTGCTTGCTTCT+AGG + Chr1:76161545-76161564 MsG0180004291.01.T01:intron 40.0%
TTATGAGCCCAAACATTTGG+TGG + Chr1:76165401-76165420 MsG0180004291.01.T01:intron 40.0%
TTCCTCCATGCTACAAATCT+TGG + Chr1:76164972-76164991 MsG0180004291.01.T01:intron 40.0%
TTGATTAAAAGGGAGGATGG+GGG + Chr1:76161296-76161315 MsG0180004291.01.T01:exon 40.0%
TTGCTAGATCTAGTGAAACC+GGG - Chr1:76164037-76164056 None:intergenic 40.0%
TTGGACTACCATGAGATGAA+TGG + Chr1:76162220-76162239 MsG0180004291.01.T01:intron 40.0%
! ATCAGAATTGTTACTTCGGC+GGG - Chr1:76164471-76164490 None:intergenic 40.0%
! ATCGTGCTCCTCAATTTTGT+TGG - Chr1:76165845-76165864 None:intergenic 40.0%
! CCTATTTAGCTTAAAAGGCC+AGG - Chr1:76163841-76163860 None:intergenic 40.0%
! CTGTTAAATTTTGCTACGGC+TGG + Chr1:76165092-76165111 MsG0180004291.01.T01:intron 40.0%
! GATCAGAATTGTTACTTCGG+CGG - Chr1:76164472-76164491 None:intergenic 40.0%
! GTTTTCATGATCGAACTGAC+TGG + Chr1:76164719-76164738 MsG0180004291.01.T01:intron 40.0%
!! AAGCTCATTGGTTCACATAC+GGG - Chr1:76164406-76164425 None:intergenic 40.0%
!! ACCGATTTGATTTGGCGATT+TGG - Chr1:76161040-76161059 None:intergenic 40.0%
!! CCGATTTGATTTGGCGATTT+GGG - Chr1:76161039-76161058 None:intergenic 40.0%
!! CCTGGCCTTTTAAGCTAAAT+AGG + Chr1:76163838-76163857 MsG0180004291.01.T01:intron 40.0%
!! GTTAGGGTTGGATTGGTTTA+GGG + Chr1:76165303-76165322 MsG0180004291.01.T01:intron 40.0%
!! GTTGTGGTTTGTTAACCATC+AGG + Chr1:76161792-76161811 MsG0180004291.01.T01:intron 40.0%
!! TTAGGGTTGGATTGGTTTAG+GGG + Chr1:76165304-76165323 MsG0180004291.01.T01:intron 40.0%
!!! CCTGTACCAGTTTTGGAAAA+CGG + Chr1:76164813-76164832 MsG0180004291.01.T01:intron 40.0%
!!! CTTTTGAGATGACTAGGGAT+GGG - Chr1:76163961-76163980 None:intergenic 40.0%
!!! GAGTCCTCTTGTTTTGAAGA+GGG + Chr1:76165768-76165787 MsG0180004291.01.T01:intron 40.0%
!!! GATGAACTTTTCAGGTTGCT+GGG + Chr1:76166446-76166465 MsG0180004291.01.T01:CDS 40.0%
!!! TCTTTTGAGATGACTAGGGA+TGG - Chr1:76163962-76163981 None:intergenic 40.0%
!!! TGAGTCCTCTTGTTTTGAAG+AGG + Chr1:76165767-76165786 MsG0180004291.01.T01:intron 40.0%
!!! TTACTTTTTAGGCCTGAGTC+TGG + Chr1:76163473-76163492 MsG0180004291.01.T01:intron 40.0%
!!! TTGGCTGCACTGTGTTTTTT+GGG - Chr1:76165826-76165845 None:intergenic 40.0%
AAACAGGGCAGCTCAAACAA+AGG + Chr1:76163223-76163242 MsG0180004291.01.T01:intron 45.0%
AAACCCACATCATGCTTTGC+CGG - Chr1:76166669-76166688 None:intergenic 45.0%
AAAGCATGATGTGGGTTTGC+TGG + Chr1:76166671-76166690 MsG0180004291.01.T01:exon 45.0%
AAAGCCAAAATCGTGGTGAG+TGG - Chr1:76165649-76165668 None:intergenic 45.0%
AAATGCAGATTGGGTCAGCT+CGG - Chr1:76164119-76164138 None:intergenic 45.0%
AAGAAAGACTCCGGACATCA+TGG + Chr1:76166345-76166364 MsG0180004291.01.T01:CDS 45.0%
AAGGCTACTGGTCATCTCTA+GGG + Chr1:76163353-76163372 MsG0180004291.01.T01:intron 45.0%
AGAAAGACTCCGGACATCAT+GGG + Chr1:76166346-76166365 MsG0180004291.01.T01:CDS 45.0%
AGATGACTAGGGATGGGAAT+AGG - Chr1:76163955-76163974 None:intergenic 45.0%
AGCTTCAGTGGTTTGATCTC+TGG + Chr1:76165552-76165571 MsG0180004291.01.T01:CDS 45.0%
ATCGAACTGACTGGTAGAAC+CGG + Chr1:76164728-76164747 MsG0180004291.01.T01:intron 45.0%
CAGTGCAGCCAACAAAATTG+AGG + Chr1:76165834-76165853 MsG0180004291.01.T01:intron 45.0%
CCAATCTTCACCATCTACCA+TGG + Chr1:76164332-76164351 MsG0180004291.01.T01:intron 45.0%
CCATCTACCATGGTCTGAAA+AGG + Chr1:76164342-76164361 MsG0180004291.01.T01:intron 45.0%
CCATGGTAGATGGTGAAGAT+TGG - Chr1:76164335-76164354 None:intergenic 45.0%
CTTATCATAGTTGCCTTGCG+AGG + Chr1:76163270-76163289 MsG0180004291.01.T01:intron 45.0%
CTTATTTAGCAGGCCGTATC+AGG - Chr1:76163510-76163529 None:intergenic 45.0%
CTTGTAAGAAGCTTGGCTAC+AGG + Chr1:76165606-76165625 MsG0180004291.01.T01:intron 45.0%
GAATCATGAGCAGTGGCTAT+AGG + Chr1:76161971-76161990 MsG0180004291.01.T01:intron 45.0%
GACAAACGCGATCCCTAATA+TGG + Chr1:76162399-76162418 MsG0180004291.01.T01:intron 45.0%
GAGACCCTTTGATATACCTC+AGG + Chr1:76164195-76164214 MsG0180004291.01.T01:CDS 45.0%
GAGATGAATGGCCTATACCT+TGG + Chr1:76162232-76162251 MsG0180004291.01.T01:intron 45.0%
GATCAAACCACTGAAGCTTC+TGG - Chr1:76165550-76165569 None:intergenic 45.0%
GATCTAGTGAAACCGGGATA+TGG - Chr1:76164031-76164050 None:intergenic 45.0%
GATTTGTAGCATGGAGGAAG+GGG - Chr1:76164971-76164990 None:intergenic 45.0%
GCTTTCGATCTTGCTTGCTT+GGG + Chr1:76165664-76165683 MsG0180004291.01.T01:intron 45.0%
GGCCATTCAAAAAGCCTCTT+AGG - Chr1:76163813-76163832 None:intergenic 45.0%
GGGCAATGATGTCTAGATTC+TGG + Chr1:76161316-76161335 MsG0180004291.01.T01:CDS 45.0%
GGGTATGTCAAGTCTAGTCA+CGG + Chr1:76164289-76164308 MsG0180004291.01.T01:intron 45.0%
GGTAGATGGTGAAGATTGGT+TGG - Chr1:76164331-76164350 None:intergenic 45.0%
GGTATAGGCCATTCATCTCA+TGG - Chr1:76162231-76162250 None:intergenic 45.0%
GTCCCACTTTCCACAATACA+CGG + Chr1:76166008-76166027 MsG0180004291.01.T01:intron 45.0%
GTGTGACATTTACACCAGCT+TGG - Chr1:76162999-76163018 None:intergenic 45.0%
GTTGAAGGTTTGCGATCTGT+TGG + Chr1:76165194-76165213 MsG0180004291.01.T01:intron 45.0%
GTTGCGATTGCGAAGAGAAT+TGG - Chr1:76161070-76161089 None:intergenic 45.0%
TAACCGGCAAAGCATGATGT+GGG + Chr1:76166663-76166682 MsG0180004291.01.T01:exon 45.0%
TAAGGCTACTGGTCATCTCT+AGG + Chr1:76163352-76163371 MsG0180004291.01.T01:intron 45.0%
TATAGGCGGTGACAAAGACA+AGG + Chr1:76161844-76161863 MsG0180004291.01.T01:CDS 45.0%
TCAAAGGGTCTCAAAGGGAA+AGG - Chr1:76164187-76164206 None:intergenic 45.0%
TCATGATCCAGAAGCTTCAG+TGG + Chr1:76165540-76165559 MsG0180004291.01.T01:intron 45.0%
TCATGGGCAACATATTACCG+AGG + Chr1:76166362-76166381 MsG0180004291.01.T01:CDS 45.0%
TCCCACTTTCCACAATACAC+GGG + Chr1:76166009-76166028 MsG0180004291.01.T01:intron 45.0%
TGACATTTACACCAGCTTGG+AGG - Chr1:76162996-76163015 None:intergenic 45.0%
TGGCTATAGGGTTTGATCGT+GGG + Chr1:76161984-76162003 MsG0180004291.01.T01:intron 45.0%
TGGGACGAACATTGCATTTG+TGG - Chr1:76162446-76162465 None:intergenic 45.0%
TGTCGTAGTTAGGTTAGGGT+TGG + Chr1:76165291-76165310 MsG0180004291.01.T01:intron 45.0%
TTGCTGGGTAAGAGCTAGTT+TGG + Chr1:76162256-76162275 MsG0180004291.01.T01:intron 45.0%
TTTGTCCCAAATCCTGCTGA+TGG - Chr1:76162385-76162404 None:intergenic 45.0%
! AACCTGATTGGCCGTCTTTA+AGG + Chr1:76162086-76162105 MsG0180004291.01.T01:intron 45.0%
! ACAGGACCGTTTTCCAAAAC+TGG - Chr1:76164822-76164841 None:intergenic 45.0%
! ACTACCACTCACCACGATTT+TGG + Chr1:76165642-76165661 MsG0180004291.01.T01:intron 45.0%
! ACTTTGTTGTCAGGGTGACA+TGG + Chr1:76161922-76161941 MsG0180004291.01.T01:CDS 45.0%
! AGAGCATCAGTGATTTCAGC+AGG - Chr1:76166542-76166561 None:intergenic 45.0%
! CCGTTTTCCAAAACTGGTAC+AGG - Chr1:76164816-76164835 None:intergenic 45.0%
! CCTTTTCAGACCATGGTAGA+TGG - Chr1:76164345-76164364 None:intergenic 45.0%
! GCCTTTATGATGGTCTTGGA+TGG + Chr1:76166627-76166646 MsG0180004291.01.T01:CDS 45.0%
! GGCCTAAGAGGCTTTTTGAA+TGG + Chr1:76163808-76163827 MsG0180004291.01.T01:intron 45.0%
! GTTGTTGGATTGGATAACGC+TGG + Chr1:76161375-76161394 MsG0180004291.01.T01:CDS 45.0%
! TACTGGTCATCTCTAGGGAT+GGG + Chr1:76163358-76163377 MsG0180004291.01.T01:intron 45.0%
! TCAGAATTGTTACTTCGGCG+GGG - Chr1:76164470-76164489 None:intergenic 45.0%
! TCATCTCTAGGGATGGGAAT+AGG + Chr1:76163364-76163383 MsG0180004291.01.T01:intron 45.0%
! TCATTTCAGGTCTGGGATCT+TGG + Chr1:76166317-76166336 MsG0180004291.01.T01:intron 45.0%
! TCTGTCACTTCACAGCATCA+AGG + Chr1:76166559-76166578 MsG0180004291.01.T01:CDS 45.0%
! TGTTTGAGCTGCCCTGTTTT+TGG - Chr1:76163222-76163241 None:intergenic 45.0%
!! GGTTAGGGTTGGATTGGTTT+AGG + Chr1:76165302-76165321 MsG0180004291.01.T01:intron 45.0%
!! TGTGGGTTTGCTGGAAACTA+AGG + Chr1:76166680-76166699 MsG0180004291.01.T01:three_prime_UTR 45.0%
!! TTGATGGTGCATCAGAAGTC+TGG - Chr1:76162576-76162595 None:intergenic 45.0%
!!! GGATGAACTTTTCAGGTTGC+TGG + Chr1:76166445-76166464 MsG0180004291.01.T01:CDS 45.0%
!!! GTTGGCTGCACTGTGTTTTT+TGG - Chr1:76165827-76165846 None:intergenic 45.0%
!!! TGGCTGCACTGTGTTTTTTG+GGG - Chr1:76165825-76165844 None:intergenic 45.0%
!! AATTAGTTATTAATTAATTT+GGG + Chr1:76161257-76161276 MsG0180004291.01.T01:five_prime_UTR 5.0%
!! TAATTAGTTATTAATTAATT+TGG + Chr1:76161256-76161275 MsG0180004291.01.T01:five_prime_UTR 5.0%
AACTTGGTTCCAAGCCAGTC+AGG + Chr1:76164757-76164776 MsG0180004291.01.T01:intron 50.0%
AAGTTAAGGGGTCCATCAGC+AGG + Chr1:76162370-76162389 MsG0180004291.01.T01:intron 50.0%
ACCAACTACCCCGTGTATTG+TGG - Chr1:76166021-76166040 None:intergenic 50.0%
ACCCCGTGTATTGTGGAAAG+TGG - Chr1:76166014-76166033 None:intergenic 50.0%
AGAAAAGGATCGAACCTGGG+AGG - Chr1:76161106-76161125 None:intergenic 50.0%
AGCTGTTTAGATGGCCTGAC+TGG - Chr1:76164774-76164793 None:intergenic 50.0%
ATAAAGGCCGTCTCCTGAGA+GGG - Chr1:76166615-76166634 None:intergenic 50.0%
CCCACTTTCCACAATACACG+GGG + Chr1:76166010-76166029 MsG0180004291.01.T01:intron 50.0%
CCCCGTGTATTGTGGAAAGT+GGG - Chr1:76166013-76166032 None:intergenic 50.0%
CCTGCCCTCTTCAAAACAAG+AGG - Chr1:76165775-76165794 None:intergenic 50.0%
CGACGTTGCTACCAACAGTA+GGG - Chr1:76161452-76161471 None:intergenic 50.0%
CTTCAATAGGCCGGCCTAAT+AGG + Chr1:76163787-76163806 MsG0180004291.01.T01:intron 50.0%
GACGACAATGACATGCTGAG+GGG - Chr1:76165008-76165027 None:intergenic 50.0%
GACGGCCTTTATGATGGTCT+TGG + Chr1:76166623-76166642 MsG0180004291.01.T01:CDS 50.0%
GGACGACAATGACATGCTGA+GGG - Chr1:76165009-76165028 None:intergenic 50.0%
GGCTATAGGGTTTGATCGTG+GGG + Chr1:76161985-76162004 MsG0180004291.01.T01:intron 50.0%
GGCTTTCGATCTTGCTTGCT+TGG + Chr1:76165663-76165682 MsG0180004291.01.T01:intron 50.0%
GGTTTGCGATCTGTTGGTGT+TGG + Chr1:76165200-76165219 MsG0180004291.01.T01:intron 50.0%
GTAACCGGCAAAGCATGATG+TGG + Chr1:76166662-76166681 MsG0180004291.01.T01:exon 50.0%
GTCCTTAAAGACGGCCAATC+AGG - Chr1:76162091-76162110 None:intergenic 50.0%
GTGGCTATAGGGTTTGATCG+TGG + Chr1:76161983-76162002 MsG0180004291.01.T01:intron 50.0%
TACCCAGCAACCCAAGGTAT+AGG - Chr1:76162246-76162265 None:intergenic 50.0%
TCAGGAGACGGCCTTTATGA+TGG + Chr1:76166617-76166636 MsG0180004291.01.T01:CDS 50.0%
TCCACAATACACGGGGTAGT+TGG + Chr1:76166017-76166036 MsG0180004291.01.T01:intron 50.0%
TCGAACTGACTGGTAGAACC+GGG + Chr1:76164729-76164748 MsG0180004291.01.T01:intron 50.0%
TCGACGTTGCTACCAACAGT+AGG - Chr1:76161453-76161472 None:intergenic 50.0%
TCTAGGGATGGGAATAGGCT+AGG + Chr1:76163369-76163388 MsG0180004291.01.T01:intron 50.0%
TGAAGTCCGTATGTCCACGT+TGG + Chr1:76163173-76163192 MsG0180004291.01.T01:intron 50.0%
TGCTGATCCACTGAGTCATG+AGG - Chr1:76162690-76162709 None:intergenic 50.0%
TGGAAAACGGTCCTGTCCAA+GGG + Chr1:76164826-76164845 MsG0180004291.01.T01:intron 50.0%
TGGACGACAATGACATGCTG+AGG - Chr1:76165010-76165029 None:intergenic 50.0%
TGTCCAGGAAAAGTTGCGTC+AGG - Chr1:76164687-76164706 None:intergenic 50.0%
TTGGAAAACGGTCCTGTCCA+AGG + Chr1:76164825-76164844 MsG0180004291.01.T01:intron 50.0%
TTTGTTCAACCTGGGCAGAG+TGG - Chr1:76165054-76165073 None:intergenic 50.0%
! CGCAGAACCTGTACCAGTTT+TGG + Chr1:76164806-76164825 MsG0180004291.01.T01:intron 50.0%
! CTACTGGTCATCTCTAGGGA+TGG + Chr1:76163357-76163376 MsG0180004291.01.T01:intron 50.0%
! GAGGCTTTTTGAATGGCCTG+TGG + Chr1:76163815-76163834 MsG0180004291.01.T01:intron 50.0%
! GGCCTTCTGAAAGCCTGATA+CGG + Chr1:76163494-76163513 MsG0180004291.01.T01:intron 50.0%
! GGGAATCCCTTTTCAGACCA+TGG - Chr1:76164352-76164371 None:intergenic 50.0%
! TTGGCGGACAAGAAAGACTC+CGG + Chr1:76166336-76166355 MsG0180004291.01.T01:CDS 50.0%
! TTTAGATGGCCTGACTGGCT+TGG - Chr1:76164769-76164788 None:intergenic 50.0%
! TTTCAGGTCTGGGATCTTGG+CGG + Chr1:76166320-76166339 MsG0180004291.01.T01:intron 50.0%
! TTTTTGAATGGCCTGTGGCC+TGG + Chr1:76163820-76163839 MsG0180004291.01.T01:intron 50.0%
!! ACTGGCTTGGAACCAAGTTC+GGG - Chr1:76164756-76164775 None:intergenic 50.0%
!! ATGGTCTTGGATGGATTGCC+GGG + Chr1:76166636-76166655 MsG0180004291.01.T01:CDS 50.0%
!! GACTGGCTTGGAACCAAGTT+CGG - Chr1:76164757-76164776 None:intergenic 50.0%
!! GATGGTCTTGGATGGATTGC+CGG + Chr1:76166635-76166654 MsG0180004291.01.T01:CDS 50.0%
!! GGAGATGTGCATTTTGGCAG+AGG + Chr1:76162420-76162439 MsG0180004291.01.T01:intron 50.0%
!!! CCTCTTGTTTTGAAGAGGGC+AGG + Chr1:76165772-76165791 MsG0180004291.01.T01:intron 50.0%
AAATTTGGCAGGCCAGGCTC+AGG - Chr1:76163415-76163434 None:intergenic 55.0%
AAGGGGAACGACAGTGAGCA+AGG - Chr1:76164954-76164973 None:intergenic 55.0%
ACAGTGAGCAAGGCAGTGTG+AGG - Chr1:76164944-76164963 None:intergenic 55.0%
ACTAGGGATGGGAATAGGCC+AGG - Chr1:76163950-76163969 None:intergenic 55.0%
ACTGAGTCATGAGGCATGCC+TGG - Chr1:76162681-76162700 None:intergenic 55.0%
AGCTCTTACCCAGCAACCCA+AGG - Chr1:76162252-76162271 None:intergenic 55.0%
AGCTTAAAAGGCCAGGCCAC+AGG - Chr1:76163834-76163853 None:intergenic 55.0%
AGGCATGCCTCATGACTCAG+TGG + Chr1:76162680-76162699 MsG0180004291.01.T01:intron 55.0%
AGGCCTTGCAAAGCCTAGCT+CGG - Chr1:76163395-76163414 None:intergenic 55.0%
AGGCGGTGACAAAGACAAGG+AGG + Chr1:76161847-76161866 MsG0180004291.01.T01:CDS 55.0%
AGGGGTCCATCAGCAGGATT+TGG + Chr1:76162376-76162395 MsG0180004291.01.T01:intron 55.0%
CAATGACATGCTGAGGGGTG+TGG - Chr1:76165003-76165022 None:intergenic 55.0%
CATAAAGGCCGTCTCCTGAG+AGG - Chr1:76166616-76166635 None:intergenic 55.0%
CCAAGGTGCATGCAATGCAG+AGG - Chr1:76166879-76166898 None:intergenic 55.0%
CCTCTGCATTGCATGCACCT+TGG + Chr1:76166876-76166895 MsG0180004291.01.T01:three_prime_UTR 55.0%
CTCAACACTCTCCTCCAAGC+TGG + Chr1:76162982-76163001 MsG0180004291.01.T01:intron 55.0%
GCCTCTTAGGCCTATTAGGC+CGG - Chr1:76163800-76163819 None:intergenic 55.0%
GCTACGGCTGGAATGCATGT+AGG + Chr1:76165104-76165123 MsG0180004291.01.T01:intron 55.0%
GCTTTCAGAAGGCCAGACTC+AGG - Chr1:76163488-76163507 None:intergenic 55.0%
GGAAAACGGTCCTGTCCAAG+GGG + Chr1:76164827-76164846 MsG0180004291.01.T01:intron 55.0%
GGCCGTATCAGGCTTTCAGA+AGG - Chr1:76163499-76163518 None:intergenic 55.0%
GGGAGCAATGCAAGTAGAGC+TGG + Chr1:76162005-76162024 MsG0180004291.01.T01:intron 55.0%
GGGGTCCATCAGCAGGATTT+GGG + Chr1:76162377-76162396 MsG0180004291.01.T01:intron 55.0%
TCGACAGCAGTGATAGAGCC+AGG + Chr1:76166408-76166427 MsG0180004291.01.T01:CDS 55.0%
TTGGAACCAAGTTCGGGTCC+CGG - Chr1:76164750-76164769 None:intergenic 55.0%
! GGACCTGACGCAACTTTTCC+TGG + Chr1:76164681-76164700 MsG0180004291.01.T01:intron 55.0%
! GGCCTATACCTTGGGTTGCT+GGG + Chr1:76162241-76162260 MsG0180004291.01.T01:intron 55.0%
! TGGCCTATACCTTGGGTTGC+TGG + Chr1:76162240-76162259 MsG0180004291.01.T01:intron 55.0%
!! ACCAAGTCTCTAAGGCCCGA+GGG - Chr1:76163049-76163068 None:intergenic 55.0%
ACCATGATGCCACTCTGCCC+AGG + Chr1:76165042-76165061 MsG0180004291.01.T01:intron 60.0%
ACCCTCGGGCCTTAGAGACT+TGG + Chr1:76163045-76163064 MsG0180004291.01.T01:intron 60.0%
ACCTGGGCAGAGTGGCATCA+TGG - Chr1:76165046-76165065 None:intergenic 60.0%
AGGCCGAGCTAGGCTTTGCA+AGG + Chr1:76163389-76163408 MsG0180004291.01.T01:intron 60.0%
CACAGACAACGCTACCTCCC+AGG + Chr1:76161089-76161108 MsG0180004291.01.T01:five_prime_UTR 60.0%
CCTACGGCCTAACCTACGAC+AGG - Chr1:76163913-76163932 None:intergenic 60.0%
CCTGTCGTAGGTTAGGCCGT+AGG + Chr1:76163910-76163929 MsG0180004291.01.T01:intron 60.0%
GCCGGCCTAATAGGCCTAAG+AGG + Chr1:76163796-76163815 MsG0180004291.01.T01:intron 60.0%
GGAATAGGCTAGGCCGAGCT+AGG + Chr1:76163379-76163398 MsG0180004291.01.T01:intron 60.0%
GTAAGCCTATGACAGGCCGC+AGG - Chr1:76163457-76163476 None:intergenic 60.0%
GTAGAACCGGGACCCGAACT+TGG + Chr1:76164741-76164760 MsG0180004291.01.T01:intron 60.0%
TAAGGCCTAAGCCTGGCCTG+CGG + Chr1:76163438-76163457 MsG0180004291.01.T01:intron 60.0%
TGGATTGCCGGGCGAGTAAC+CGG + Chr1:76166647-76166666 MsG0180004291.01.T01:CDS 60.0%
! TGCTTTGCCGGTTACTCGCC+CGG - Chr1:76166657-76166676 None:intergenic 60.0%
!! CACCAAGTCTCTAAGGCCCG+AGG - Chr1:76163050-76163069 None:intergenic 60.0%
AACCTACGACAGGCCAGGCC+AGG - Chr1:76163903-76163922 None:intergenic 65.0%
AATAGGCCAGGCCGGCCTAC+AGG - Chr1:76163938-76163957 None:intergenic 65.0%
ATAGGCCAGGCCGGCCTACA+GGG - Chr1:76163937-76163956 None:intergenic 65.0%
CAAGCTTGCAGCGCCCTCTC+AGG + Chr1:76166599-76166618 MsG0180004291.01.T01:CDS 65.0%
GGCCTAACCTACGACAGGCC+AGG - Chr1:76163908-76163927 None:intergenic 65.0%
GGCCTGGCCTGTCGTAGGTT+AGG + Chr1:76163903-76163922 MsG0180004291.01.T01:intron 65.0%
GGCTTTGCAAGGCCTGAGCC+TGG + Chr1:76163400-76163419 MsG0180004291.01.T01:intron 65.0%
GGGATGGGAATAGGCCAGGC+CGG - Chr1:76163946-76163965 None:intergenic 65.0%
GTTAGGCCGTAGGCCCCTGT+AGG + Chr1:76163920-76163939 MsG0180004291.01.T01:intron 65.0%
TGCAGCGCCCTCTCAGGAGA+CGG + Chr1:76166605-76166624 MsG0180004291.01.T01:CDS 65.0%
ACAGGCCGCAGGCCAGGCTT+AGG - Chr1:76163446-76163465 None:intergenic 70.0%
AGCCTGGCCTGGCCTGTCGT+AGG + Chr1:76163898-76163917 MsG0180004291.01.T01:intron 70.0%
CCTATGACAGGCCGCAGGCC+AGG - Chr1:76163452-76163471 None:intergenic 70.0%
CCTGGCCTGCGGCCTGTCAT+AGG + Chr1:76163449-76163468 MsG0180004291.01.T01:intron 70.0%
TAGGCCAGGCCGGCCTACAG+GGG - Chr1:76163936-76163955 None:intergenic 70.0%
GGCCGGCCTACAGGGGCCTA+CGG - Chr1:76163929-76163948 None:intergenic 75.0%
GGCCGTAGGCCCCTGTAGGC+CGG + Chr1:76163924-76163943 MsG0180004291.01.T01:intron 75.0%
TAGGCCCCTGTAGGCCGGCC+TGG + Chr1:76163929-76163948 MsG0180004291.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 76160936 76166898 76160936 ID=MsG0180004291.01;Name=MsG0180004291.01
Chr1 mRNA 76160936 76166898 76160936 ID=MsG0180004291.01.T01;Parent=MsG0180004291.01;Name=MsG0180004291.01.T01;_AED=0.39;_eAED=0.53;_QI=238|0.2|0.5|1|0.8|0.66|6|219|281
Chr1 exon 76160936 76161110 76160936 ID=MsG0180004291.01.T01:exon:12574;Parent=MsG0180004291.01.T01
Chr1 exon 76161249 76161502 76161249 ID=MsG0180004291.01.T01:exon:12575;Parent=MsG0180004291.01.T01
Chr1 exon 76161814 76161943 76161814 ID=MsG0180004291.01.T01:exon:12576;Parent=MsG0180004291.01.T01
Chr1 exon 76164178 76164290 76164178 ID=MsG0180004291.01.T01:exon:12577;Parent=MsG0180004291.01.T01
Chr1 exon 76165551 76165608 76165551 ID=MsG0180004291.01.T01:exon:12578;Parent=MsG0180004291.01.T01
Chr1 exon 76166326 76166898 76166326 ID=MsG0180004291.01.T01:exon:12579;Parent=MsG0180004291.01.T01
Chr1 five_prime_UTR 76160936 76161110 76160936 ID=MsG0180004291.01.T01:five_prime_utr;Parent=MsG0180004291.01.T01
Chr1 five_prime_UTR 76161249 76161311 76161249 ID=MsG0180004291.01.T01:five_prime_utr;Parent=MsG0180004291.01.T01
Chr1 CDS 76161312 76161502 76161312 ID=MsG0180004291.01.T01:cds;Parent=MsG0180004291.01.T01
Chr1 CDS 76161814 76161943 76161814 ID=MsG0180004291.01.T01:cds;Parent=MsG0180004291.01.T01
Chr1 CDS 76164178 76164290 76164178 ID=MsG0180004291.01.T01:cds;Parent=MsG0180004291.01.T01
Chr1 CDS 76165551 76165608 76165551 ID=MsG0180004291.01.T01:cds;Parent=MsG0180004291.01.T01
Chr1 CDS 76166326 76166679 76166326 ID=MsG0180004291.01.T01:cds;Parent=MsG0180004291.01.T01
Chr1 three_prime_UTR 76166680 76166898 76166680 ID=MsG0180004291.01.T01:three_prime_utr;Parent=MsG0180004291.01.T01
Gene Sequence

>MsG0180004291.01.T01

ATGGGGGCAATGATGTCTAGATTCTGGTTCATGTTATTCCCTGCTAAAGAGTATAAGATTGTTGTTGTTGGATTGGATAACGCTGGTAAAACTACCACTCTTTATAAATTGCATCTTGGTGAGGTTGTTACTACTAACCCTACTGTTGGTAGCAACGTCGAAGAGCTCGTCTACAAAACATTCGATTCGAGGGAGAAGAATTGGTATAGGATAAATAGTGTTATAGGCGGTGACAAAGACAAGGAGGAAACTATGGCATTTGTAACACTTGAGTGTAAGATCTATGGTTTGTTGGTTTTACTTTGTTGTCAGGGTGACATGACTGATCCTTTCCCTTTGAGACCCTTTGATATACCTCAGGATTCAAGCTATTGCATTCCAATGACTATCACAAAGAGAATTGAGTATTTGGTCCACAACAATGATGACAAAGGAAGCTTCAGTGGTTTGATCTCTGGTCCGATTTTCAAAGCATTAATTTCTACTTCTCTTGTCTGGGATCTTGGCGGACAAGAAAGACTCCGGACATCATGGGCAACATATTACCGAGGAACTCATGCTGTAATTGCAGTGATCGACAGCAGTGATAGAGCCAGGATCTCTTTAATGAAGGATGAACTTTTCAGGTTGCTGGGTCATGAAGATTTACAACATTCAGTCATCCTTGTCTTTGCTAATAAACAAGATATCAAGGATGCTATGACTCCTGCTGAAATCACTGATGCTCTGTCACTTCACAGCATCAAGGATCATGATTGGCATATACAAGCTTGCAGCGCCCTCTCAGGAGACGGCCTTTATGATGGTCTTGGATGGATTGCCGGGCGAGTAACCGGCAAAGCATGA
Protein sequence

>MsG0180004291.01.T01

MGAMMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTNPTVGSNVEELVYKTFDSREKNWYRINSVIGGDKDKEETMAFVTLECKIYGLLVLLCCQGDMTDPFPLRPFDIPQDSSYCIPMTITKRIEYLVHNNDDKGSFSGLISGPIFKALISTSLVWDLGGQERLRTSWATYYRGTHAVIAVIDSSDRARISLMKDELFRLLGHEDLQHSVILVFANKQDIKDAMTPAEITDALSLHSIKDHDWHIQACSALSGDGLYDGLGWIAGRVTGKA*