Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004914.01.T01 | RHN81173.1 | 89.552 | 67 | 7 | 0 | 5 | 71 | 31 | 97 | 6.58E-33 | 120 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004914.01.T01 | P37834 | 62.5 | 64 | 24 | 0 | 2 | 65 | 67 | 130 | 3.15E-20 | 84.7 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004914.01.T01 | A0A396JY46 | 89.552 | 67 | 7 | 0 | 5 | 71 | 31 | 97 | 3.14e-33 | 120 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047925.01 | MsG0180004914.01 | 0.803947 | 2.733460e-49 | 1.391809e-46 |
MsG0180004914.01 | MsG0280006325.01 | 0.813090 | 3.052654e-51 | 1.974564e-48 |
MsG0180004914.01 | MsG0280009248.01 | 0.825425 | 4.721011e-54 | 4.301309e-51 |
MsG0180004914.01 | MsG0280009371.01 | 0.805675 | 1.190255e-49 | 6.335681e-47 |
MsG0180004914.01 | MsG0380013883.01 | 0.806372 | 8.493992e-50 | 4.602512e-47 |
MsG0180004914.01 | MsG0380013896.01 | 0.823904 | 1.077330e-53 | 9.399441e-51 |
MsG0180004914.01 | MsG0580026222.01 | 0.802746 | 4.846601e-49 | 2.392854e-46 |
MsG0180004914.01 | MsG0680033466.01 | 0.804389 | 2.211827e-49 | 1.138973e-46 |
MsG0180004914.01 | MsG0780039282.01 | 0.826177 | 3.129854e-54 | 2.913540e-51 |
MsG0180004914.01 | MsG0880044788.01 | 0.807916 | 4.000671e-50 | 2.256129e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004914.01.T01 | MTR_1g089005 | 87.500 | 56 | 7 | 0 | 9 | 64 | 71 | 126 | 7.94e-28 | 98.2 |
MsG0180004914.01.T01 | MTR_7g107520 | 69.841 | 63 | 19 | 0 | 2 | 64 | 68 | 130 | 1.36e-23 | 90.9 |
MsG0180004914.01.T01 | MTR_0155s0040 | 61.194 | 67 | 26 | 0 | 2 | 68 | 70 | 136 | 1.11e-22 | 88.2 |
MsG0180004914.01.T01 | MTR_4g046713 | 58.209 | 67 | 28 | 0 | 2 | 68 | 70 | 136 | 9.95e-22 | 85.9 |
MsG0180004914.01.T01 | MTR_6g027440 | 56.250 | 64 | 28 | 0 | 3 | 66 | 65 | 128 | 1.82e-19 | 79.7 |
MsG0180004914.01.T01 | MTR_1g077000 | 59.375 | 64 | 26 | 0 | 2 | 65 | 82 | 145 | 2.52e-19 | 79.3 |
MsG0180004914.01.T01 | MTR_2g088770 | 58.462 | 65 | 26 | 1 | 2 | 66 | 69 | 132 | 4.76e-19 | 78.6 |
MsG0180004914.01.T01 | MTR_5g022870 | 60.938 | 64 | 25 | 0 | 2 | 65 | 66 | 129 | 1.26e-18 | 77.4 |
MsG0180004914.01.T01 | MTR_1g025980 | 56.923 | 65 | 28 | 0 | 2 | 66 | 67 | 131 | 1.19e-17 | 74.7 |
MsG0180004914.01.T01 | MTR_8g075100 | 59.375 | 64 | 26 | 0 | 2 | 65 | 69 | 132 | 1.44e-17 | 74.7 |
MsG0180004914.01.T01 | MTR_1g115900 | 52.941 | 68 | 31 | 1 | 2 | 68 | 70 | 137 | 5.92e-17 | 73.2 |
MsG0180004914.01.T01 | MTR_2g077990 | 56.061 | 66 | 27 | 1 | 2 | 65 | 119 | 184 | 8.99e-17 | 72.8 |
MsG0180004914.01.T01 | MTR_2g078280 | 56.061 | 66 | 27 | 1 | 2 | 65 | 119 | 184 | 1.09e-16 | 72.8 |
MsG0180004914.01.T01 | MTR_7g086820 | 52.308 | 65 | 31 | 0 | 2 | 66 | 63 | 127 | 1.16e-16 | 72.0 |
MsG0180004914.01.T01 | MTR_2g078610 | 54.545 | 66 | 28 | 1 | 2 | 65 | 119 | 184 | 3.72e-16 | 71.2 |
MsG0180004914.01.T01 | MTR_3g094650 | 53.030 | 66 | 30 | 1 | 2 | 66 | 71 | 136 | 7.15e-16 | 70.1 |
MsG0180004914.01.T01 | MTR_5g017860 | 56.923 | 65 | 27 | 1 | 2 | 65 | 70 | 134 | 9.70e-16 | 69.7 |
MsG0180004914.01.T01 | MTR_5g017850 | 55.385 | 65 | 28 | 1 | 2 | 65 | 70 | 134 | 1.64e-15 | 68.9 |
MsG0180004914.01.T01 | MTR_2g067440 | 56.250 | 64 | 27 | 1 | 2 | 65 | 103 | 165 | 1.89e-15 | 69.3 |
MsG0180004914.01.T01 | MTR_2g067450 | 54.545 | 66 | 28 | 1 | 2 | 65 | 53 | 118 | 1.97e-15 | 68.9 |
MsG0180004914.01.T01 | MTR_5g014100 | 53.846 | 65 | 29 | 1 | 2 | 65 | 69 | 133 | 4.13e-15 | 68.2 |
MsG0180004914.01.T01 | MTR_4g029180 | 51.515 | 66 | 30 | 2 | 2 | 65 | 70 | 135 | 4.29e-15 | 67.8 |
MsG0180004914.01.T01 | MTR_2g084080 | 55.385 | 65 | 28 | 1 | 2 | 65 | 68 | 132 | 4.37e-15 | 67.8 |
MsG0180004914.01.T01 | MTR_2g084090 | 53.846 | 65 | 29 | 1 | 2 | 65 | 68 | 132 | 4.86e-15 | 67.8 |
MsG0180004914.01.T01 | MTR_2g084110 | 55.385 | 65 | 28 | 1 | 2 | 65 | 68 | 132 | 5.40e-15 | 67.8 |
MsG0180004914.01.T01 | MTR_1g101830 | 52.308 | 65 | 31 | 0 | 2 | 66 | 70 | 134 | 5.89e-15 | 67.4 |
MsG0180004914.01.T01 | MTR_2g029560 | 51.562 | 64 | 30 | 1 | 2 | 64 | 67 | 130 | 8.98e-15 | 67.0 |
MsG0180004914.01.T01 | MTR_5g074970 | 52.308 | 65 | 30 | 1 | 2 | 65 | 73 | 137 | 9.81e-15 | 67.0 |
MsG0180004914.01.T01 | MTR_4g122640 | 53.846 | 65 | 29 | 1 | 2 | 65 | 81 | 145 | 1.02e-14 | 67.0 |
MsG0180004914.01.T01 | MTR_2g029815 | 53.226 | 62 | 28 | 1 | 2 | 62 | 72 | 133 | 1.07e-14 | 67.0 |
MsG0180004914.01.T01 | MTR_5g021060 | 53.226 | 62 | 28 | 1 | 2 | 62 | 73 | 134 | 1.56e-14 | 66.2 |
MsG0180004914.01.T01 | MTR_7g072480 | 53.846 | 65 | 29 | 1 | 2 | 65 | 67 | 131 | 1.91e-14 | 66.2 |
MsG0180004914.01.T01 | MTR_7g086870 | 46.875 | 64 | 34 | 0 | 2 | 65 | 65 | 128 | 1.99e-14 | 65.9 |
MsG0180004914.01.T01 | MTR_5g074860 | 49.275 | 69 | 33 | 2 | 2 | 68 | 72 | 140 | 2.38e-14 | 65.5 |
MsG0180004914.01.T01 | MTR_4g029170 | 51.515 | 66 | 30 | 2 | 2 | 65 | 70 | 135 | 2.59e-14 | 65.9 |
MsG0180004914.01.T01 | MTR_7g026990 | 50.769 | 65 | 31 | 1 | 2 | 65 | 74 | 138 | 3.43e-14 | 65.5 |
MsG0180004914.01.T01 | MTR_6g048160 | 47.826 | 69 | 33 | 1 | 2 | 70 | 26 | 91 | 3.59e-14 | 61.6 |
MsG0180004914.01.T01 | MTR_5g049280 | 51.471 | 68 | 32 | 1 | 2 | 68 | 76 | 143 | 3.74e-14 | 65.5 |
MsG0180004914.01.T01 | MTR_5g074710 | 46.377 | 69 | 35 | 2 | 2 | 68 | 68 | 136 | 4.68e-14 | 65.1 |
MsG0180004914.01.T01 | MTR_8g076820 | 51.613 | 62 | 29 | 1 | 2 | 62 | 73 | 134 | 4.70e-14 | 65.1 |
MsG0180004914.01.T01 | MTR_2g084020 | 51.515 | 66 | 31 | 1 | 2 | 66 | 68 | 133 | 4.72e-14 | 65.1 |
MsG0180004914.01.T01 | MTR_2g029820 | 51.613 | 62 | 29 | 1 | 2 | 62 | 72 | 133 | 4.74e-14 | 65.1 |
MsG0180004914.01.T01 | MTR_2g084010 | 51.515 | 66 | 31 | 1 | 2 | 66 | 68 | 133 | 5.22e-14 | 65.1 |
MsG0180004914.01.T01 | MTR_4g125940 | 50.769 | 65 | 29 | 2 | 2 | 65 | 16 | 78 | 5.73e-14 | 64.3 |
MsG0180004914.01.T01 | MTR_4g125940 | 50.769 | 65 | 29 | 2 | 2 | 65 | 71 | 133 | 5.93e-14 | 64.7 |
MsG0180004914.01.T01 | MTR_4g114210 | 50.000 | 64 | 29 | 1 | 2 | 65 | 64 | 124 | 6.11e-14 | 64.7 |
MsG0180004914.01.T01 | MTR_5g074860 | 50.746 | 67 | 31 | 2 | 2 | 66 | 72 | 138 | 6.30e-14 | 64.7 |
MsG0180004914.01.T01 | MTR_7g093370 | 52.239 | 67 | 30 | 2 | 2 | 66 | 112 | 178 | 8.37e-14 | 64.7 |
MsG0180004914.01.T01 | MTR_3g072260 | 52.308 | 65 | 30 | 1 | 2 | 65 | 69 | 133 | 8.97e-14 | 62.0 |
MsG0180004914.01.T01 | MTR_1g022970 | 45.312 | 64 | 34 | 1 | 2 | 64 | 89 | 152 | 9.67e-14 | 64.3 |
MsG0180004914.01.T01 | MTR_3g092990 | 53.846 | 65 | 29 | 1 | 2 | 65 | 69 | 133 | 9.76e-14 | 64.3 |
MsG0180004914.01.T01 | MTR_4g029200 | 48.529 | 68 | 34 | 1 | 2 | 68 | 89 | 156 | 1.04e-13 | 64.3 |
MsG0180004914.01.T01 | MTR_2g029730 | 52.459 | 61 | 28 | 1 | 2 | 61 | 68 | 128 | 1.31e-13 | 63.9 |
MsG0180004914.01.T01 | MTR_2g029800 | 50.000 | 62 | 30 | 1 | 2 | 62 | 72 | 133 | 1.76e-13 | 63.5 |
MsG0180004914.01.T01 | MTR_2g437770 | 50.000 | 62 | 28 | 1 | 3 | 64 | 94 | 152 | 1.96e-13 | 63.5 |
MsG0180004914.01.T01 | MTR_4g133800 | 50.000 | 62 | 28 | 1 | 3 | 64 | 85 | 143 | 2.07e-13 | 63.2 |
MsG0180004914.01.T01 | MTR_2g029830 | 51.515 | 66 | 30 | 2 | 1 | 64 | 1 | 66 | 2.88e-13 | 62.8 |
MsG0180004914.01.T01 | MTR_5g083860 | 50.769 | 65 | 31 | 1 | 2 | 65 | 74 | 138 | 2.99e-13 | 62.8 |
MsG0180004914.01.T01 | MTR_7g086790 | 49.206 | 63 | 32 | 0 | 4 | 66 | 15 | 77 | 3.34e-13 | 61.6 |
MsG0180004914.01.T01 | MTR_1g054205 | 49.254 | 67 | 32 | 2 | 2 | 66 | 67 | 133 | 3.47e-13 | 62.8 |
MsG0180004914.01.T01 | MTR_5g074760 | 46.377 | 69 | 35 | 2 | 2 | 68 | 68 | 136 | 3.74e-13 | 62.4 |
MsG0180004914.01.T01 | MTR_2g029830 | 50.000 | 64 | 31 | 1 | 2 | 64 | 71 | 134 | 3.86e-13 | 62.8 |
MsG0180004914.01.T01 | MTR_5g074740 | 47.761 | 67 | 33 | 2 | 2 | 66 | 68 | 134 | 4.75e-13 | 62.4 |
MsG0180004914.01.T01 | MTR_2g008160 | 46.875 | 64 | 32 | 1 | 2 | 65 | 67 | 128 | 5.09e-13 | 61.2 |
MsG0180004914.01.T01 | MTR_2g029740 | 49.180 | 61 | 30 | 1 | 2 | 61 | 72 | 132 | 6.85e-13 | 62.0 |
MsG0180004914.01.T01 | MTR_3g092990 | 54.839 | 62 | 27 | 1 | 5 | 65 | 61 | 122 | 1.14e-12 | 61.2 |
MsG0180004914.01.T01 | MTR_4g030890 | 43.939 | 66 | 36 | 1 | 2 | 66 | 143 | 208 | 1.17e-12 | 61.2 |
MsG0180004914.01.T01 | MTR_7g072510 | 52.308 | 65 | 30 | 1 | 2 | 65 | 63 | 127 | 1.25e-12 | 61.2 |
MsG0180004914.01.T01 | MTR_4g074990 | 45.312 | 64 | 34 | 1 | 2 | 64 | 67 | 130 | 2.00e-12 | 60.5 |
MsG0180004914.01.T01 | MTR_2g008160 | 46.875 | 64 | 32 | 1 | 2 | 65 | 67 | 128 | 2.03e-12 | 60.5 |
MsG0180004914.01.T01 | MTR_2g008160 | 46.875 | 64 | 32 | 1 | 2 | 65 | 67 | 128 | 2.16e-12 | 60.5 |
MsG0180004914.01.T01 | MTR_4g031140 | 43.939 | 66 | 36 | 1 | 2 | 66 | 71 | 136 | 2.28e-12 | 60.5 |
MsG0180004914.01.T01 | MTR_2g028980 | 46.774 | 62 | 32 | 1 | 2 | 62 | 72 | 133 | 2.40e-12 | 60.5 |
MsG0180004914.01.T01 | MTR_2g084000 | 46.970 | 66 | 34 | 1 | 2 | 66 | 69 | 134 | 4.11e-12 | 59.7 |
MsG0180004914.01.T01 | MTR_7g072490 | 53.226 | 62 | 28 | 1 | 5 | 65 | 2 | 63 | 4.33e-12 | 58.5 |
MsG0180004914.01.T01 | MTR_2g008710 | 50.000 | 64 | 29 | 1 | 2 | 65 | 70 | 130 | 5.00e-12 | 59.3 |
MsG0180004914.01.T01 | MTR_4g095450 | 50.725 | 69 | 30 | 2 | 2 | 66 | 70 | 138 | 5.22e-12 | 59.3 |
MsG0180004914.01.T01 | MTR_4g074980 | 45.312 | 64 | 34 | 1 | 2 | 64 | 68 | 131 | 5.33e-12 | 58.9 |
MsG0180004914.01.T01 | MTR_4g074995 | 46.875 | 64 | 33 | 1 | 2 | 64 | 67 | 130 | 5.37e-12 | 59.3 |
MsG0180004914.01.T01 | MTR_4g074980 | 45.312 | 64 | 34 | 1 | 2 | 64 | 68 | 131 | 5.81e-12 | 59.3 |
MsG0180004914.01.T01 | MTR_1g086320 | 46.377 | 69 | 36 | 1 | 2 | 69 | 73 | 141 | 6.20e-12 | 59.3 |
MsG0180004914.01.T01 | MTR_2g029860 | 48.387 | 62 | 31 | 1 | 2 | 62 | 72 | 133 | 6.28e-12 | 59.3 |
MsG0180004914.01.T01 | MTR_0286s0010 | 55.738 | 61 | 25 | 1 | 4 | 62 | 80 | 140 | 6.46e-12 | 59.3 |
MsG0180004914.01.T01 | MTR_6g008075 | 55.738 | 61 | 25 | 1 | 4 | 62 | 80 | 140 | 6.46e-12 | 59.3 |
MsG0180004914.01.T01 | MTR_4g083710 | 45.312 | 64 | 34 | 1 | 2 | 64 | 70 | 133 | 8.51e-12 | 58.9 |
MsG0180004914.01.T01 | MTR_1g090760 | 52.239 | 67 | 29 | 2 | 5 | 68 | 74 | 140 | 8.95e-12 | 58.9 |
MsG0180004914.01.T01 | MTR_1g038680 | 51.515 | 66 | 30 | 2 | 2 | 65 | 72 | 137 | 9.46e-12 | 58.5 |
MsG0180004914.01.T01 | MTR_1g086490 | 46.377 | 69 | 36 | 1 | 2 | 69 | 73 | 141 | 1.22e-11 | 58.5 |
MsG0180004914.01.T01 | MTR_2g040000 | 47.692 | 65 | 31 | 2 | 2 | 65 | 72 | 134 | 1.25e-11 | 58.2 |
MsG0180004914.01.T01 | MTR_2g029850 | 49.180 | 61 | 30 | 1 | 2 | 61 | 72 | 132 | 1.32e-11 | 58.2 |
MsG0180004914.01.T01 | MTR_3g072190 | 51.515 | 66 | 31 | 1 | 1 | 65 | 1 | 66 | 2.47e-11 | 57.0 |
MsG0180004914.01.T01 | MTR_8g062780 | 50.000 | 68 | 32 | 1 | 3 | 68 | 67 | 134 | 2.76e-11 | 57.4 |
MsG0180004914.01.T01 | MTR_2g099175 | 49.206 | 63 | 30 | 1 | 2 | 64 | 79 | 139 | 2.91e-11 | 57.4 |
MsG0180004914.01.T01 | MTR_4g029190 | 46.154 | 65 | 34 | 1 | 2 | 65 | 89 | 153 | 3.50e-11 | 57.0 |
MsG0180004914.01.T01 | MTR_5g016010 | 44.928 | 69 | 34 | 2 | 2 | 66 | 70 | 138 | 3.79e-11 | 57.0 |
MsG0180004914.01.T01 | MTR_2g077980 | 49.091 | 55 | 28 | 0 | 11 | 65 | 1 | 55 | 5.25e-11 | 56.6 |
MsG0180004914.01.T01 | MTR_3g072190 | 49.231 | 65 | 32 | 1 | 2 | 65 | 69 | 133 | 5.63e-11 | 56.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004914.01.T01 | AT3G21770 | 62.500 | 64 | 23 | 1 | 2 | 65 | 72 | 134 | 9.74e-20 | 80.9 |
MsG0180004914.01.T01 | AT5G42180 | 58.462 | 65 | 27 | 0 | 2 | 66 | 66 | 130 | 2.60e-19 | 79.3 |
MsG0180004914.01.T01 | AT1G05260 | 60.938 | 64 | 24 | 1 | 2 | 65 | 69 | 131 | 5.14e-19 | 78.6 |
MsG0180004914.01.T01 | AT1G05240 | 53.731 | 67 | 30 | 1 | 2 | 68 | 69 | 134 | 1.32e-18 | 77.4 |
MsG0180004914.01.T01 | AT1G05250 | 53.731 | 67 | 30 | 1 | 2 | 68 | 69 | 134 | 1.32e-18 | 77.4 |
MsG0180004914.01.T01 | AT4G33420 | 56.250 | 64 | 28 | 0 | 2 | 65 | 80 | 143 | 3.05e-18 | 76.6 |
MsG0180004914.01.T01 | AT4G33420 | 56.250 | 64 | 28 | 0 | 2 | 65 | 127 | 190 | 6.42e-18 | 75.9 |
MsG0180004914.01.T01 | AT2G39040 | 56.061 | 66 | 28 | 1 | 2 | 66 | 89 | 154 | 1.36e-17 | 75.1 |
MsG0180004914.01.T01 | AT4G11290 | 53.846 | 65 | 29 | 1 | 2 | 65 | 68 | 132 | 1.49e-17 | 74.7 |
MsG0180004914.01.T01 | AT4G33870 | 56.250 | 64 | 28 | 0 | 2 | 65 | 111 | 174 | 1.88e-17 | 74.7 |
MsG0180004914.01.T01 | AT3G01190 | 56.250 | 64 | 27 | 1 | 2 | 65 | 69 | 131 | 2.35e-16 | 71.2 |
MsG0180004914.01.T01 | AT5G51890 | 49.231 | 65 | 33 | 0 | 2 | 66 | 69 | 133 | 3.14e-16 | 71.2 |
MsG0180004914.01.T01 | AT5G15180 | 53.125 | 64 | 29 | 1 | 2 | 65 | 75 | 137 | 3.88e-16 | 70.9 |
MsG0180004914.01.T01 | AT2G35380 | 55.385 | 65 | 28 | 1 | 2 | 65 | 73 | 137 | 7.22e-16 | 70.1 |
MsG0180004914.01.T01 | AT5G66390 | 53.226 | 62 | 28 | 1 | 2 | 62 | 76 | 137 | 1.27e-15 | 69.3 |
MsG0180004914.01.T01 | AT5G64100 | 53.125 | 64 | 27 | 1 | 2 | 65 | 80 | 140 | 1.31e-15 | 69.3 |
MsG0180004914.01.T01 | AT3G03670 | 46.875 | 64 | 34 | 0 | 2 | 65 | 66 | 129 | 1.60e-15 | 69.3 |
MsG0180004914.01.T01 | AT5G05340 | 52.308 | 65 | 30 | 1 | 2 | 65 | 73 | 137 | 3.69e-15 | 68.2 |
MsG0180004914.01.T01 | AT1G49570 | 52.308 | 65 | 30 | 1 | 2 | 65 | 91 | 155 | 9.22e-15 | 67.0 |
MsG0180004914.01.T01 | AT1G44970 | 50.000 | 64 | 31 | 1 | 2 | 64 | 88 | 151 | 3.04e-14 | 65.9 |
MsG0180004914.01.T01 | AT5G22410 | 50.769 | 65 | 29 | 2 | 2 | 66 | 71 | 132 | 4.05e-14 | 65.5 |
MsG0180004914.01.T01 | AT4G16270 | 53.846 | 65 | 29 | 1 | 2 | 65 | 93 | 157 | 5.88e-14 | 65.1 |
MsG0180004914.01.T01 | AT4G36430 | 51.613 | 62 | 29 | 1 | 2 | 62 | 73 | 134 | 6.61e-14 | 64.7 |
MsG0180004914.01.T01 | AT4G08770 | 50.769 | 65 | 31 | 1 | 2 | 65 | 67 | 131 | 7.81e-14 | 64.7 |
MsG0180004914.01.T01 | AT2G22420 | 46.970 | 66 | 34 | 1 | 2 | 66 | 66 | 131 | 8.35e-14 | 64.3 |
MsG0180004914.01.T01 | AT5G64110 | 54.688 | 64 | 26 | 2 | 2 | 65 | 77 | 137 | 8.72e-14 | 64.3 |
MsG0180004914.01.T01 | AT3G32980 | 50.000 | 66 | 32 | 1 | 2 | 66 | 74 | 139 | 1.67e-13 | 63.5 |
MsG0180004914.01.T01 | AT3G50990 | 49.231 | 65 | 32 | 1 | 2 | 65 | 84 | 148 | 1.67e-13 | 63.5 |
MsG0180004914.01.T01 | AT5G06720 | 46.970 | 66 | 34 | 1 | 2 | 66 | 75 | 140 | 1.78e-13 | 63.5 |
MsG0180004914.01.T01 | AT2G41480 | 51.562 | 64 | 28 | 1 | 2 | 65 | 72 | 132 | 2.92e-13 | 62.8 |
MsG0180004914.01.T01 | AT2G18140 | 50.000 | 62 | 30 | 1 | 2 | 62 | 78 | 139 | 3.00e-13 | 62.8 |
MsG0180004914.01.T01 | AT4G08780 | 47.692 | 65 | 33 | 1 | 2 | 65 | 67 | 131 | 3.04e-13 | 62.8 |
MsG0180004914.01.T01 | AT2G18150 | 50.000 | 62 | 30 | 1 | 2 | 62 | 79 | 140 | 5.19e-13 | 62.4 |
MsG0180004914.01.T01 | AT5G39580 | 53.846 | 65 | 27 | 2 | 2 | 66 | 68 | 129 | 5.30e-13 | 61.6 |
MsG0180004914.01.T01 | AT1G68850 | 46.875 | 64 | 33 | 1 | 2 | 64 | 73 | 136 | 6.89e-13 | 62.0 |
MsG0180004914.01.T01 | AT5G64120 | 51.389 | 72 | 27 | 3 | 2 | 73 | 78 | 141 | 1.09e-12 | 61.2 |
MsG0180004914.01.T01 | AT1G14550 | 44.118 | 68 | 37 | 1 | 2 | 68 | 69 | 136 | 1.37e-12 | 60.8 |
MsG0180004914.01.T01 | AT1G77100 | 47.692 | 65 | 33 | 1 | 2 | 66 | 67 | 130 | 2.78e-12 | 60.1 |
MsG0180004914.01.T01 | AT5G39580 | 53.846 | 65 | 27 | 2 | 2 | 66 | 68 | 129 | 3.33e-12 | 60.1 |
MsG0180004914.01.T01 | AT2G38390 | 44.615 | 65 | 35 | 1 | 2 | 65 | 74 | 138 | 3.58e-12 | 60.1 |
MsG0180004914.01.T01 | AT1G71695 | 43.939 | 66 | 35 | 1 | 2 | 65 | 87 | 152 | 3.70e-12 | 60.1 |
MsG0180004914.01.T01 | AT5G40150 | 47.826 | 69 | 34 | 1 | 2 | 68 | 75 | 143 | 3.91e-12 | 59.7 |
MsG0180004914.01.T01 | AT4G31760 | 54.688 | 64 | 26 | 2 | 2 | 65 | 72 | 132 | 4.89e-12 | 59.7 |
MsG0180004914.01.T01 | AT3G49110 | 45.455 | 66 | 35 | 1 | 2 | 66 | 76 | 141 | 7.48e-12 | 58.9 |
MsG0180004914.01.T01 | AT5G17820 | 46.154 | 65 | 32 | 1 | 2 | 66 | 120 | 181 | 8.36e-12 | 58.9 |
MsG0180004914.01.T01 | AT3G49120 | 45.455 | 66 | 35 | 1 | 2 | 66 | 75 | 140 | 8.41e-12 | 58.9 |
MsG0180004914.01.T01 | AT3G28200 | 47.826 | 69 | 34 | 1 | 2 | 68 | 64 | 132 | 1.17e-11 | 58.5 |
MsG0180004914.01.T01 | AT2G24800 | 51.562 | 64 | 28 | 2 | 2 | 65 | 74 | 134 | 1.84e-11 | 57.4 |
MsG0180004914.01.T01 | AT2G43480 | 53.125 | 64 | 27 | 2 | 2 | 65 | 80 | 140 | 2.60e-11 | 57.4 |
MsG0180004914.01.T01 | AT4G26010 | 38.462 | 65 | 40 | 0 | 2 | 66 | 93 | 157 | 3.03e-11 | 57.4 |
MsG0180004914.01.T01 | AT5G17820 | 46.154 | 65 | 32 | 1 | 2 | 66 | 67 | 128 | 3.38e-11 | 57.0 |
MsG0180004914.01.T01 | AT5G06730 | 45.455 | 66 | 35 | 1 | 2 | 66 | 76 | 141 | 3.52e-11 | 57.0 |
MsG0180004914.01.T01 | AT1G24110 | 47.059 | 68 | 34 | 1 | 3 | 68 | 66 | 133 | 3.62e-11 | 57.0 |
MsG0180004914.01.T01 | AT5G19890 | 50.769 | 65 | 28 | 2 | 2 | 65 | 73 | 134 | 4.13e-11 | 57.0 |
MsG0180004914.01.T01 | AT5G14130 | 50.725 | 69 | 31 | 2 | 2 | 68 | 116 | 183 | 4.16e-11 | 57.0 |
MsG0180004914.01.T01 | AT1G14540 | 44.118 | 68 | 37 | 1 | 2 | 68 | 64 | 131 | 4.18e-11 | 57.0 |
MsG0180004914.01.T01 | AT4G26010 | 38.462 | 65 | 40 | 0 | 2 | 66 | 65 | 129 | 4.39e-11 | 56.6 |
MsG0180004914.01.T01 | AT1G30870 | 46.774 | 62 | 30 | 1 | 3 | 64 | 95 | 153 | 4.78e-11 | 56.6 |
MsG0180004914.01.T01 | AT5G58390 | 46.154 | 65 | 34 | 1 | 2 | 65 | 64 | 128 | 5.27e-11 | 56.6 |
MsG0180004914.01.T01 | AT5G14130 | 50.725 | 69 | 31 | 2 | 2 | 68 | 75 | 142 | 5.91e-11 | 56.6 |
MsG0180004914.01.T01 | AT5G67400 | 48.529 | 68 | 31 | 2 | 2 | 65 | 70 | 137 | 6.13e-11 | 56.6 |
MsG0180004914.01.T01 | AT2G24800 | 51.562 | 64 | 28 | 2 | 2 | 65 | 74 | 134 | 6.20e-11 | 56.6 |
MsG0180004914.01.T01 | AT5G19880 | 48.529 | 68 | 32 | 2 | 2 | 66 | 68 | 135 | 6.97e-11 | 56.2 |
MsG0180004914.01.T01 | AT4G37520 | 47.826 | 69 | 32 | 2 | 2 | 66 | 70 | 138 | 8.41e-11 | 56.2 |
Find 16 sgRNAs with CRISPR-Local
Find 17 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGCAAACATGTACATTTC+AGG | 0.234422 | 1:+84324526 | None:intergenic |
AATCCAGCCAAAGTTAAATT+AGG | 0.293626 | 1:-84324610 | None:intergenic |
TCTTTAGAAGGTTAGGATAA+TGG | 0.340876 | 1:-84324740 | None:intergenic |
ATTCCTAATTTAACTTTGGC+TGG | 0.362050 | 1:+84324607 | MsG0180004914.01.T01:CDS |
TGCAATTCCTAATTTAACTT+TGG | 0.376115 | 1:+84324603 | MsG0180004914.01.T01:CDS |
ACATATTGGCATTGGCTGCT+AGG | 0.396602 | 1:+84324698 | MsG0180004914.01.T01:CDS |
TGTCTCTTGTGCTGACATAT+TGG | 0.397888 | 1:+84324684 | MsG0180004914.01.T01:CDS |
CATATTGGCATTGGCTGCTA+GGG | 0.399948 | 1:+84324699 | MsG0180004914.01.T01:CDS |
GTCAGCACAAGAGACAGTTT+TGG | 0.458590 | 1:-84324677 | None:intergenic |
CTCTGCAGTGTTGTTGCCAG+TGG | 0.488945 | 1:-84324575 | None:intergenic |
AACATGTACATTTCAGGTTG+CGG | 0.503734 | 1:+84324532 | None:intergenic |
TTGTGCTGACATATTGGCAT+TGG | 0.506167 | 1:+84324690 | MsG0180004914.01.T01:CDS |
TGCTAGGGGTGCTGTTTCGA+CGG | 0.507882 | 1:+84324714 | MsG0180004914.01.T01:CDS |
TGGCAACAACACTGCAGAGA+AGG | 0.538851 | 1:+84324579 | MsG0180004914.01.T01:CDS |
ATGTACATTTCAGGTTGCGG+TGG | 0.623291 | 1:+84324535 | MsG0180004914.01.T01:CDS |
ATATTGGCATTGGCTGCTAG+GGG | 0.654372 | 1:+84324700 | MsG0180004914.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | CATAGATGACATAAAAAATG+CGG | + | Chr1:84324639-84324658 | MsG0180004914.01.T01:CDS | 25.0% |
!! | TGCAATTCCTAATTTAACTT+TGG | + | Chr1:84324603-84324622 | MsG0180004914.01.T01:CDS | 25.0% |
AATCCAGCCAAAGTTAAATT+AGG | - | Chr1:84324613-84324632 | None:intergenic | 30.0% | |
! | ATTCCTAATTTAACTTTGGC+TGG | + | Chr1:84324607-84324626 | MsG0180004914.01.T01:CDS | 30.0% |
!! | AGTTTTGGCACATTTTTCCT+CGG | - | Chr1:84324665-84324684 | None:intergenic | 35.0% |
! | TGTCTCTTGTGCTGACATAT+TGG | + | Chr1:84324684-84324703 | MsG0180004914.01.T01:CDS | 40.0% |
! | TTGTGCTGACATATTGGCAT+TGG | + | Chr1:84324690-84324709 | MsG0180004914.01.T01:CDS | 40.0% |
!!! | TCAGTTTTGTTGAACTCCAC+TGG | + | Chr1:84324559-84324578 | MsG0180004914.01.T01:CDS | 40.0% |
TGACATAAAAAATGCGGCCG+AGG | + | Chr1:84324645-84324664 | MsG0180004914.01.T01:CDS | 45.0% | |
! | GTCAGCACAAGAGACAGTTT+TGG | - | Chr1:84324680-84324699 | None:intergenic | 45.0% |
!! | ACATATTGGCATTGGCTGCT+AGG | + | Chr1:84324698-84324717 | MsG0180004914.01.T01:CDS | 45.0% |
!! | ATATTGGCATTGGCTGCTAG+GGG | + | Chr1:84324700-84324719 | MsG0180004914.01.T01:CDS | 45.0% |
!! | ATGTACATTTCAGGTTGCGG+TGG | + | Chr1:84324535-84324554 | MsG0180004914.01.T01:CDS | 45.0% |
!! | CATATTGGCATTGGCTGCTA+GGG | + | Chr1:84324699-84324718 | MsG0180004914.01.T01:CDS | 45.0% |
TGGCAACAACACTGCAGAGA+AGG | + | Chr1:84324579-84324598 | MsG0180004914.01.T01:CDS | 50.0% | |
! | CTCTGCAGTGTTGTTGCCAG+TGG | - | Chr1:84324578-84324597 | None:intergenic | 55.0% |
!! | TGCTAGGGGTGCTGTTTCGA+CGG | + | Chr1:84324714-84324733 | MsG0180004914.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 84324535 | 84324759 | 84324535 | ID=MsG0180004914.01;Name=MsG0180004914.01 |
Chr1 | mRNA | 84324535 | 84324759 | 84324535 | ID=MsG0180004914.01.T01;Parent=MsG0180004914.01;Name=MsG0180004914.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|74 |
Chr1 | exon | 84324535 | 84324759 | 84324535 | ID=MsG0180004914.01.T01:exon:9202;Parent=MsG0180004914.01.T01 |
Chr1 | CDS | 84324535 | 84324759 | 84324535 | ID=MsG0180004914.01.T01:cds;Parent=MsG0180004914.01.T01 |
Gene Sequence |
Protein sequence |