AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080047925.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080047925.01.T01 MTR_5g078250 55.094 481 177 6 1 444 1 479 0.0 525
MsG0080047925.01.T01 MTR_8g062030 55.452 431 162 2 1 401 1 431 4.69e-166 484
MsG0080047925.01.T01 MTR_1g075850 46.850 508 174 10 1 473 1 447 1.65e-149 440
MsG0080047925.01.T01 MTR_4g046077 48.947 380 135 8 103 465 1 338 2.73e-102 314
MsG0080047925.01.T01 MTR_6g051890 45.317 331 122 5 1 331 5 276 1.25e-88 279
MsG0080047925.01.T01 MTR_2g048560 33.556 450 267 4 1 418 1 450 1.66e-86 278
MsG0080047925.01.T01 MTR_4g036240 34.884 430 244 6 1 398 1 426 1.27e-84 273
MsG0080047925.01.T01 MTR_0042s0170 40.659 455 175 13 103 534 1 383 2.59e-84 268
MsG0080047925.01.T01 MTR_8g479260 31.294 425 256 5 8 398 10 432 2.80e-73 243
MsG0080047925.01.T01 MTR_2g008650 31.294 425 256 5 8 398 10 432 5.71e-73 243
MsG0080047925.01.T01 MTR_6g052340 53.036 247 74 5 1 211 1 241 6.43e-73 245
MsG0080047925.01.T01 MTR_3g056270 31.936 501 279 14 29 488 186 665 5.63e-70 238
MsG0080047925.01.T01 MTR_3g056270 37.500 192 109 1 1 181 1 192 5.02e-36 143
MsG0080047925.01.T01 MTR_8g059025 69.565 138 42 0 1 138 1 138 6.15e-67 213
MsG0080047925.01.T01 MTR_4g036240 34.000 350 195 6 81 398 1 346 1.98e-61 210
MsG0080047925.01.T01 MTR_8g467450 64.029 139 50 0 1 139 1 139 1.12e-58 192
MsG0080047925.01.T01 MTR_3g081610 51.596 188 61 3 211 398 10 167 1.63e-58 194
MsG0080047925.01.T01 MTR_2g048550 28.670 436 266 6 1 398 1 429 1.66e-49 178
MsG0080047925.01.T01 MTR_4g036240 32.753 287 157 6 144 398 1 283 2.58e-46 168
MsG0080047925.01.T01 MTR_8g062060 28.571 420 257 7 13 398 13 423 1.12e-45 169
MsG0080047925.01.T01 MTR_1g094230 33.447 293 167 5 1 267 1 291 1.17e-41 152
MsG0080047925.01.T01 MTR_8g463820 34.815 270 154 4 1 250 1 268 4.35e-41 150
MsG0080047925.01.T01 MTR_6g039240 33.333 291 166 5 1 265 1 289 1.08e-40 149
MsG0080047925.01.T01 MTR_4g134870 45.395 152 76 1 211 362 117 261 1.98e-39 149
MsG0080047925.01.T01 MTR_6g445520 29.492 295 169 3 142 398 1 294 3.91e-39 148
MsG0080047925.01.T01 MTR_3g056240 37.696 191 108 1 1 180 1 191 4.30e-38 143
MsG0080047925.01.T01 MTR_7g089660 36.652 221 131 4 1 219 1 214 1.80e-37 139
MsG0080047925.01.T01 MTR_1g105785 24.169 451 291 11 11 426 11 445 3.26e-37 145
MsG0080047925.01.T01 MTR_8g088810 31.126 302 170 3 1 264 1 302 2.67e-36 137
MsG0080047925.01.T01 MTR_2g054710 32.258 217 134 2 8 213 10 224 4.85e-36 135
MsG0080047925.01.T01 MTR_7g110100 24.882 422 280 7 11 398 11 429 3.20e-35 139
MsG0080047925.01.T01 MTR_3g095950 40.491 163 97 0 1 163 1 163 3.07e-34 127
MsG0080047925.01.T01 MTR_1g036740 41.104 163 96 0 1 163 1 163 4.55e-34 127
MsG0080047925.01.T01 MTR_8g096680 41.104 163 96 0 1 163 1 163 4.55e-34 127
MsG0080047925.01.T01 MTR_5g055160 32.411 253 144 2 1 253 1 226 8.66e-34 129
MsG0080047925.01.T01 MTR_4g471610 40.491 163 97 0 1 163 1 163 9.29e-34 126
MsG0080047925.01.T01 MTR_3g078440 40.491 163 97 0 1 163 1 163 9.29e-34 126
MsG0080047925.01.T01 MTR_8g036090 40.491 163 97 0 1 163 1 163 9.29e-34 126
MsG0080047925.01.T01 MTR_8g469510 63.218 87 32 0 20 106 3 89 3.62e-33 122
MsG0080047925.01.T01 MTR_3g116750 41.667 156 91 0 8 163 8 163 4.07e-33 124
MsG0080047925.01.T01 MTR_7g093810 39.877 163 98 0 1 163 1 163 4.69e-33 124
MsG0080047925.01.T01 MTR_2g062200 47.403 154 67 4 44 185 1 152 6.31e-33 124
MsG0080047925.01.T01 MTR_1g050500 27.248 367 213 9 78 408 2 350 2.74e-32 130
MsG0080047925.01.T01 MTR_6g069230 34.513 226 116 4 14 209 110 333 1.07e-31 126
MsG0080047925.01.T01 MTR_5g070620 67.532 77 25 0 2 78 27 103 2.17e-31 117
MsG0080047925.01.T01 MTR_4g028320 43.662 142 80 0 22 163 3 144 1.52e-30 117
MsG0080047925.01.T01 MTR_7g051400 23.598 428 300 12 11 426 11 423 2.77e-30 125
MsG0080047925.01.T01 MTR_5g085220 38.650 163 100 0 1 163 1 163 4.92e-30 116
MsG0080047925.01.T01 MTR_3g044760 27.907 301 182 5 1 272 1 295 2.61e-28 118
MsG0080047925.01.T01 MTR_6g033945 34.146 205 65 4 128 270 28 224 5.24e-27 109
MsG0080047925.01.T01 MTR_6g013455 30.739 257 165 4 1 250 1 251 6.38e-27 110
MsG0080047925.01.T01 MTR_5g056060 30.709 254 144 4 1 253 1 223 7.20e-26 107
MsG0080047925.01.T01 MTR_7g104000 29.412 272 155 5 1 265 1 242 9.86e-26 106
MsG0080047925.01.T01 MTR_2g032570 37.576 165 101 1 1 163 1 165 1.03e-25 104
MsG0080047925.01.T01 MTR_4g016120 43.478 115 65 0 49 163 40 154 6.43e-24 99.0
MsG0080047925.01.T01 MTR_6g465570 34.839 155 100 1 14 168 10 163 7.18e-24 99.0
MsG0080047925.01.T01 MTR_5g007120 32.579 221 123 2 50 269 19 214 8.08e-24 100
MsG0080047925.01.T01 MTR_2g058350 30.216 278 154 6 14 290 14 252 1.50e-23 103
MsG0080047925.01.T01 MTR_3g084550 42.623 122 70 0 42 163 1 122 1.59e-23 96.7
MsG0080047925.01.T01 MTR_1g072220 41.803 122 71 0 42 163 1 122 2.33e-23 96.3
MsG0080047925.01.T01 MTR_7g032985 59.420 69 28 0 100 168 1 69 1.80e-22 91.7
MsG0080047925.01.T01 MTR_8g461360 41.007 139 70 2 58 185 1 138 2.95e-22 95.9
MsG0080047925.01.T01 MTR_4g040040 33.099 142 90 2 260 398 3 142 1.13e-21 92.4
MsG0080047925.01.T01 MTR_2g099880 43.443 122 69 0 42 163 7 128 2.47e-21 90.5
MsG0080047925.01.T01 MTR_1g060700 35.057 174 51 2 103 214 1 174 6.31e-21 96.3
MsG0080047925.01.T01 MTR_1788s0010 36.923 130 82 0 10 139 10 139 9.25e-21 89.0
MsG0080047925.01.T01 MTR_7g117425 45.946 111 54 1 6 116 6 110 1.21e-20 92.0
MsG0080047925.01.T01 MTR_4g022520 42.478 113 65 0 51 163 11 123 2.78e-20 89.7
MsG0080047925.01.T01 MTR_6g051880 28.378 222 130 4 70 275 2 210 8.50e-20 92.4
MsG0080047925.01.T01 MTR_5g068430 33.117 154 96 1 1 154 1 147 3.14e-19 86.3
MsG0080047925.01.T01 MTR_5g032920 43.750 96 54 0 1 96 1 96 9.04e-19 82.0
MsG0080047925.01.T01 MTR_8g005940 25.664 226 166 2 14 239 14 237 5.16e-18 85.1
MsG0080047925.01.T01 MTR_7g451880 27.368 190 125 2 14 191 15 203 7.94e-18 85.1
MsG0080047925.01.T01 MTR_3g452170 22.254 346 226 8 11 320 11 349 1.32e-17 85.9
MsG0080047925.01.T01 MTR_4g058660 26.842 190 126 2 14 191 14 202 7.88e-17 82.0
MsG0080047925.01.T01 MTR_8g078450 37.086 151 78 3 75 213 2 147 1.77e-16 77.4
MsG0080047925.01.T01 MTR_1g082860 25.789 190 119 2 14 191 14 193 4.90e-16 79.0
MsG0080047925.01.T01 MTR_1g011490 22.481 258 158 3 14 239 14 261 7.71e-16 79.0
MsG0080047925.01.T01 MTR_8g465040 29.747 158 110 1 11 168 11 167 1.32e-15 75.1
MsG0080047925.01.T01 MTR_3g015660 25.263 190 129 2 14 191 14 202 1.74e-15 76.6
MsG0080047925.01.T01 MTR_4g032585 28.283 198 135 5 237 428 11 207 1.97e-15 77.4
MsG0080047925.01.T01 MTR_1g051235 26.994 163 109 3 11 168 11 168 3.73e-15 73.9
MsG0080047925.01.T01 MTR_4g032565 28.426 197 134 5 237 427 11 206 5.34e-15 76.3
MsG0080047925.01.T01 MTR_7g074180 25.389 193 131 2 11 191 11 202 5.83e-15 76.6
MsG0080047925.01.T01 MTR_1g091180 38.776 98 60 0 24 121 2 99 9.12e-15 71.2
MsG0080047925.01.T01 MTR_7g045450 24.082 245 165 5 11 236 11 253 9.16e-15 74.7
MsG0080047925.01.T01 MTR_6g073570 24.082 245 165 5 11 236 11 253 9.16e-15 74.7
MsG0080047925.01.T01 MTR_1g023370 25.263 190 129 2 14 191 14 202 1.35e-14 75.1
MsG0080047925.01.T01 MTR_5g030110 25.263 190 129 2 14 191 14 202 1.40e-14 75.5
MsG0080047925.01.T01 MTR_2g007410 25.263 190 129 2 14 191 14 202 1.40e-14 75.5
MsG0080047925.01.T01 MTR_7g024060 25.263 190 129 2 14 191 14 202 1.76e-14 75.1
MsG0080047925.01.T01 MTR_6g087820 25.263 190 129 2 14 191 14 202 1.76e-14 75.1
MsG0080047925.01.T01 MTR_5g081190 25.263 190 129 2 14 191 14 202 1.76e-14 75.1
MsG0080047925.01.T01 MTR_5g091480 25.263 190 129 2 14 191 14 202 1.76e-14 75.1
MsG0080047925.01.T01 MTR_5g056290 25.263 190 129 2 14 191 14 202 1.76e-14 75.1
MsG0080047925.01.T01 MTR_3g031190 25.263 190 129 2 14 191 14 202 1.76e-14 75.1
MsG0080047925.01.T01 MTR_2g005490 25.263 190 129 2 14 191 14 202 1.76e-14 75.1
MsG0080047925.01.T01 MTR_2g010570 25.263 190 129 2 14 191 14 202 1.76e-14 75.1
MsG0080047925.01.T01 MTR_3g032190 41.667 84 49 0 1 84 1 84 2.60e-14 69.7
MsG0080047925.01.T01 MTR_5g060920 43.038 79 45 0 6 84 8 86 2.61e-14 69.7
MsG0080047925.01.T01 MTR_0032s0020 35.135 111 72 0 13 123 13 123 2.05e-13 73.2
MsG0080047925.01.T01 MTR_0032s0020 29.870 154 91 3 238 391 173 309 9.29e-13 71.2
MsG0080047925.01.T01 MTR_8g446640 25.275 182 123 2 22 191 3 183 2.89e-13 71.2
MsG0080047925.01.T01 MTR_2g010270 22.093 258 161 4 22 239 3 260 2.91e-13 71.2
MsG0080047925.01.T01 MTR_1g096860 44.444 72 40 0 42 113 1 72 7.12e-13 64.3
MsG0080047925.01.T01 MTR_5g054640 36.735 98 62 0 24 121 2 99 1.16e-12 65.9
MsG0080047925.01.T01 MTR_2g450060 21.687 415 270 13 1 370 5 409 1.33e-12 70.9
MsG0080047925.01.T01 MTR_1g056650 43.056 72 41 0 42 113 1 72 3.33e-12 62.4
MsG0080047925.01.T01 MTR_5g004860 22.518 413 269 10 1 370 1 405 3.58e-12 69.3
MsG0080047925.01.T01 MTR_4g071730 31.757 148 77 4 127 253 9 153 4.31e-12 64.7
MsG0080047925.01.T01 MTR_0048s0080 21.933 269 161 9 137 371 2 255 1.12e-11 66.6
MsG0080047925.01.T01 MTR_5g045850 24.737 190 115 3 14 191 14 187 1.14e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080047925.01.T01 AT1G52950 23.834 386 236 10 10 348 12 386 3.04e-28 119
MsG0080047925.01.T01 AT2G05642 22.593 509 331 14 19 479 19 512 3.11e-28 119

Find 173 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATCTCCCTCTGGGTTTA+TGG 0.130491 contig148end:+14502 MsG0080047925.01.T01:three_prime_UTR
CACCGCTGATTATGATTATT+TGG 0.171120 contig148end:+11672 MsG0080047925.01.T01:CDS
ATTTGAAATATCAGCTTATA+TGG 0.194564 contig148end:-11565 MsG0080047925.01.T01:intergenic
TTATGAACACGACTAGAATT+TGG 0.216990 contig148end:+12181 MsG0080047925.01.T01:CDS
GGGAAGGATGATGTTGTTTA+AGG 0.226381 contig148end:+13003 MsG0080047925.01.T01:CDS
TCATGTTTGATGGATCTTAT+AGG 0.299693 contig148end:+13050 MsG0080047925.01.T01:CDS
AACTCAATCCAGATCAAGTT+TGG 0.306008 contig148end:-14351 MsG0080047925.01.T01:intergenic
CTTCGCTTGGTCCTCGCATT+AGG 0.310386 contig148end:+12410 MsG0080047925.01.T01:CDS
CATTTCCTAAAATCTCCCTC+TGG 0.337579 contig148end:+14494 MsG0080047925.01.T01:three_prime_UTR
TAGTGATTTGGTAGAGGATC+TGG 0.342831 contig148end:+13251 MsG0080047925.01.T01:CDS
CTGTGCTGTTGTGGAAGGTT+TGG 0.342880 contig148end:+12522 MsG0080047925.01.T01:CDS
CAGTAATATGCACCAGAATC+AGG 0.344639 contig148end:-12598 MsG0080047925.01.T01:intergenic
TTTCAGAAGAAGTTGGTAGA+AGG 0.346459 contig148end:+11475 MsG0080047925.01.T01:CDS
CGGTGTGGGCGCAAACTTCT+TGG 0.348141 contig148end:-11654 MsG0080047925.01.T01:intergenic
AAATCTCCCTCTGGGTTTAT+GGG 0.351497 contig148end:+14503 MsG0080047925.01.T01:three_prime_UTR
CAAACTTCTTGGATCTTAAT+CGG 0.352336 contig148end:-11643 MsG0080047925.01.T01:intergenic
GGAAGCTGGGGAAGGATTGC+CGG 0.355817 contig148end:+12021 MsG0080047925.01.T01:CDS
GTTGTGGAAGGTTTGGTTGA+GGG 0.360112 contig148end:+12529 MsG0080047925.01.T01:CDS
CAGAATTCCTCAACAATAGA+TGG 0.369411 contig148end:-13094 MsG0080047925.01.T01:intergenic
CATGTTTGATGGATCTTATA+GGG 0.370520 contig148end:+13051 MsG0080047925.01.T01:CDS
CTTCCGAGAGAGAGTACGTT+AGG 0.377349 contig148end:+11805 MsG0080047925.01.T01:CDS
AATATAACCTTGGAACCATA+TGG 0.377849 contig148end:-12645 MsG0080047925.01.T01:intergenic
GGATGCTGAGTTGAGTGAAT+TGG 0.378551 contig148end:+13871 MsG0080047925.01.T01:CDS
AGGAGTGTTACTCCTGATTC+TGG 0.380403 contig148end:+12586 MsG0080047925.01.T01:CDS
AATTATGTGTTGTAGGTATA+AGG 0.382305 contig148end:+12724 MsG0080047925.01.T01:intron
GGTGACATGCAACTGTTTCT+TGG 0.386320 contig148end:+12800 MsG0080047925.01.T01:CDS
CAAGGCTCCCAAACTTGATC+TGG 0.387928 contig148end:+14343 MsG0080047925.01.T01:CDS
AGCCTGATCAGGTTTCAAAA+AGG 0.390572 contig148end:-11240 MsG0080047925.01.T01:intergenic
GGTCGTGTGTCTGATACATC+TGG 0.392611 contig148end:+13965 MsG0080047925.01.T01:CDS
GATGTTGTTGGTTTGATGAC+TGG 0.398535 contig148end:+11777 MsG0080047925.01.T01:intron
ATACAACAATTGCCTTCTAA+TGG 0.399641 contig148end:-11449 MsG0080047925.01.T01:intergenic
CAGATCAAGTTTGGGAGCCT+TGG 0.400511 contig148end:-14342 MsG0080047925.01.T01:intergenic
AAGGTTGAGTGTGCGTTGTT+TGG 0.400585 contig148end:+11965 MsG0080047925.01.T01:intron
GCAGTGTTTGTGATGTTTGA+TGG 0.403092 contig148end:+12779 MsG0080047925.01.T01:CDS
TGTTTGTGTGATATTGTTCC+TGG 0.404785 contig148end:+11164 MsG0080047925.01.T01:CDS
AAATACTGCTCCAGTTCTTA+AGG 0.409409 contig148end:+13994 MsG0080047925.01.T01:CDS
CAAAATGTTACCTTAAGAAC+TGG 0.411162 contig148end:-14004 MsG0080047925.01.T01:intergenic
TTGTGGAAGGTTTGGTTGAG+GGG 0.411929 contig148end:+12530 MsG0080047925.01.T01:CDS
TTACAAAGCATAAAGTCTAA+TGG 0.418387 contig148end:-14425 MsG0080047925.01.T01:intergenic
TATGAACACGACTAGAATTT+GGG 0.418474 contig148end:+12182 MsG0080047925.01.T01:CDS
GGGTTCTGAGGTTAGTGATT+TGG 0.419541 contig148end:+13239 MsG0080047925.01.T01:CDS
TCCTGAGATTGTTAGTTTGA+AGG 0.424223 contig148end:+12982 MsG0080047925.01.T01:CDS
TCAACAGAGTTAGCCTGATC+AGG 0.429762 contig148end:-11251 MsG0080047925.01.T01:intergenic
CGCAAGGCATTTGACGCAGT+TGG 0.430086 contig148end:+14290 MsG0080047925.01.T01:CDS
TAATTCTGTGTAGATGTTGT+TGG 0.433961 contig148end:+11765 MsG0080047925.01.T01:intron
TCTAGTGTTGTTCCTTCGCT+TGG 0.436276 contig148end:+12397 MsG0080047925.01.T01:CDS
TTTGCAGTTGCCCCTGGTGT+TGG 0.441612 contig148end:+11520 MsG0080047925.01.T01:CDS
CCCTTCAAACTAACAATCTC+AGG 0.442351 contig148end:-12983 MsG0080047925.01.T01:intergenic
CTACTGCTGCTGAGAAGAAT+GGG 0.445703 contig148end:+14240 MsG0080047925.01.T01:CDS
CAGACCCTAGCTGTGGATCC+TGG 0.446283 contig148end:+14155 MsG0080047925.01.T01:intron
CAGAAGAAGTTGGTAGAAGG+AGG 0.447420 contig148end:+11478 MsG0080047925.01.T01:CDS
TGTGTCTCCTCAACAACCTC+TGG 0.450330 contig148end:-13902 MsG0080047925.01.T01:intergenic
GATGCTGAGTTGAGTGAATT+GGG 0.450630 contig148end:+13872 MsG0080047925.01.T01:CDS
GTCGAGAAGACTGCATCTGC+AGG 0.453268 contig148end:+13025 MsG0080047925.01.T01:CDS
AGCGAAGGAACAACACTAGA+AGG 0.454161 contig148end:-12394 MsG0080047925.01.T01:intergenic
GCTACTGCTGCTGAGAAGAA+TGG 0.456853 contig148end:+14239 MsG0080047925.01.T01:CDS
AGATTCATGCCACCATTAGA+AGG 0.458064 contig148end:+11437 MsG0080047925.01.T01:CDS
GCAGTAGCTCCTGACAGGTC+TGG 0.460741 contig148end:-14224 MsG0080047925.01.T01:intergenic
TCTGCAGGGGTCATGTTTGA+TGG 0.461394 contig148end:+13040 MsG0080047925.01.T01:CDS
ATGTTGTTGGTTTGATGACT+GGG 0.464793 contig148end:+11778 MsG0080047925.01.T01:CDS
AATATCACACAAACAATCAA+TGG 0.466623 contig148end:-11156 MsG0080047925.01.T01:intergenic
AACATAGATACTCATACAAT+AGG 0.466758 contig148end:-14581 MsG0080047925.01.T01:intergenic
TGGATGTGAGGCTGTAAGTT+TGG 0.469171 contig148end:+14175 MsG0080047925.01.T01:CDS
ATCCTGCGCGTCGTTGTCAT+AGG 0.469694 contig148end:+12566 MsG0080047925.01.T01:CDS
CCTGAGATTGTTAGTTTGAA+GGG 0.471203 contig148end:+12983 MsG0080047925.01.T01:CDS
ATTTCCTAAAATCTCCCTCT+GGG 0.472904 contig148end:+14495 MsG0080047925.01.T01:three_prime_UTR
GGATGGAAAGGTTACTAAGA+TGG 0.473621 contig148end:+11827 MsG0080047925.01.T01:CDS
AGAGTACGTTAGGGATGGAA+AGG 0.475235 contig148end:+11815 MsG0080047925.01.T01:CDS
AATTTCACAGCCTCTTCAAA+AGG 0.476523 contig148end:-12213 MsG0080047925.01.T01:intergenic
TCATACTTTGCAGTTGCCCC+TGG 0.477173 contig148end:+11514 MsG0080047925.01.T01:CDS
CTCTGATGTTGTGGGTTCTG+AGG 0.483251 contig148end:+13227 MsG0080047925.01.T01:CDS
TGTGGAAGGTTTGGTTGAGG+GGG 0.488124 contig148end:+12531 MsG0080047925.01.T01:CDS
TGTTGTGGAAGGTTTGGTTG+AGG 0.488730 contig148end:+12528 MsG0080047925.01.T01:CDS
GGTTGTCTACTATGTTGTGT+TGG 0.491458 contig148end:+14397 MsG0080047925.01.T01:three_prime_UTR
TGGATCTTATAGGGTGAAGA+GGG 0.492867 contig148end:+13060 MsG0080047925.01.T01:CDS
GTTGTCTGTGCTGTTGTGGA+AGG 0.494419 contig148end:+12517 MsG0080047925.01.T01:CDS
GGATCAAGGTGCGTGTGCTT+AGG 0.496137 contig148end:+11201 MsG0080047925.01.T01:CDS
AATGTGCAGTTTGTGTCTGA+TGG 0.498589 contig148end:+13845 MsG0080047925.01.T01:intron
CTCTGTTAGACTGAAAATGC+TGG 0.501150 contig148end:+12950 MsG0080047925.01.T01:intron
GCTGATTATGATTATTTGGT+TGG 0.504058 contig148end:+11676 MsG0080047925.01.T01:CDS
TGAGGTTAGTGATTTGGTAG+AGG 0.506036 contig148end:+13245 MsG0080047925.01.T01:CDS
ACTCAATCCAGATCAAGTTT+GGG 0.509725 contig148end:-14350 MsG0080047925.01.T01:intergenic
TATCAGCTTATATGGATGAA+TGG 0.512952 contig148end:-11557 MsG0080047925.01.T01:intergenic
TGTTGAGGAGACACAAATTG+AGG 0.516639 contig148end:+13910 MsG0080047925.01.T01:CDS
CATTAGGCCTTCGATTGAAG+AGG 0.522179 contig148end:+12426 MsG0080047925.01.T01:CDS
CTGGATTGAGTTCACCTGTA+GGG 0.523875 contig148end:+14362 MsG0080047925.01.T01:exon
AATATCAGTGTTGCAATCCA+TGG 0.525062 contig148end:+12364 MsG0080047925.01.T01:intron
CAGCAGCAGTAGCTCCTGAC+AGG 0.525221 contig148end:-14229 MsG0080047925.01.T01:intergenic
TGATTCTCTCCAGAAGATGA+TGG 0.528400 contig148end:+11997 MsG0080047925.01.T01:CDS
CACTAGAAGGTTCAATGCCA+TGG 0.529130 contig148end:-12381 MsG0080047925.01.T01:intergenic
ATCCTCCATGACTCTCTACC+AGG 0.529476 contig148end:-11182 MsG0080047925.01.T01:intergenic
AGATTGTTAGTTTGAAGGGA+AGG 0.530656 contig148end:+12987 MsG0080047925.01.T01:CDS
AATGTTGTTGTTACTCCAGT+GGG 0.530779 contig148end:+13944 MsG0080047925.01.T01:CDS
GTACGGTATGAGCCAACACC+AGG 0.531748 contig148end:-11532 MsG0080047925.01.T01:intergenic
TTTAAAAGTCCAGACCTGTC+AGG 0.532245 contig148end:+14215 MsG0080047925.01.T01:CDS
ATAAATATACACACCTTGGC+CGG 0.532251 contig148end:-13291 MsG0080047925.01.T01:intergenic
ATCGGAGAAAGTCCATGCAC+AGG 0.532897 contig148end:-11625 MsG0080047925.01.T01:intergenic
TTCACAGCCTCTTCAAAAGG+AGG 0.533603 contig148end:-12210 MsG0080047925.01.T01:intergenic
GATTCTCTCCAGAAGATGAT+GGG 0.535338 contig148end:+11998 MsG0080047925.01.T01:CDS
TGTGAAGCATGTGTTCCATA+TGG 0.535840 contig148end:+12630 MsG0080047925.01.T01:CDS
ATCCCTAACGTACTCTCTCT+CGG 0.537768 contig148end:-11808 MsG0080047925.01.T01:intergenic
GACACAAATTGAGGATTTCG+TGG 0.538543 contig148end:+13919 MsG0080047925.01.T01:CDS
TTGAATGCCATTGTGGAGGA+TGG 0.542450 contig148end:+12487 MsG0080047925.01.T01:CDS
AAACTTACAGCCTCACATCC+AGG 0.544375 contig148end:-14173 MsG0080047925.01.T01:intergenic
GCTGTAAGTTTGGCGGATGA+TGG 0.546225 contig148end:+14185 MsG0080047925.01.T01:CDS
TTATGTTGTCTGTGCTGTTG+TGG 0.548070 contig148end:+12513 MsG0080047925.01.T01:CDS
TTCCGAGAGAGAGTACGTTA+GGG 0.549663 contig148end:+11806 MsG0080047925.01.T01:CDS
CACATCCAGGATCCACAGCT+AGG 0.550757 contig148end:-14160 MsG0080047925.01.T01:intergenic
GTATCAGACACACGACCCAC+TGG 0.552972 contig148end:-13959 MsG0080047925.01.T01:intergenic
TAGAGAGTCATGGAGGATCA+AGG 0.553834 contig148end:+11187 MsG0080047925.01.T01:CDS
TTCTGGTGCATATTACTGCA+AGG 0.555168 contig148end:+12603 MsG0080047925.01.T01:CDS
TCAGGCTAACTCTGTTGAGA+TGG 0.555939 contig148end:+11256 MsG0080047925.01.T01:CDS
CTCCTATGACAACGACGCGC+AGG 0.556082 contig148end:-12568 MsG0080047925.01.T01:intergenic
GGAATTCTGCACTTCTGTCA+AGG 0.559554 contig148end:+13108 MsG0080047925.01.T01:CDS
ATGGATCTTATAGGGTGAAG+AGG 0.564607 contig148end:+13059 MsG0080047925.01.T01:CDS
ATGTGTTCCATATGGTTCCA+AGG 0.573536 contig148end:+12638 MsG0080047925.01.T01:CDS
AAGAAATCCTCTTCAATCGA+AGG 0.574744 contig148end:-12433 MsG0080047925.01.T01:intergenic
GCAGTTTGTGTCTGATGGTG+TGG 0.575103 contig148end:+13850 MsG0080047925.01.T01:intron
TAATGTTGTTGTTACTCCAG+TGG 0.578117 contig148end:+13943 MsG0080047925.01.T01:CDS
TATATGGATGAATGGTAGTA+CGG 0.578247 contig148end:-11549 MsG0080047925.01.T01:intergenic
TCTGGATTGAGTTCACCTGT+AGG 0.578340 contig148end:+14361 MsG0080047925.01.T01:exon
AATGAAGACAAAGGTGGAGA+GGG 0.584507 contig148end:+11585 MsG0080047925.01.T01:CDS
AGCTGTGGATCCTGGATGTG+AGG 0.585040 contig148end:+14163 MsG0080047925.01.T01:CDS
CCACACAGTCTCAACCCTAC+AGG 0.585086 contig148end:-14376 MsG0080047925.01.T01:intergenic
TTGTTCCTGGTAGAGAGTCA+TGG 0.586636 contig148end:+11177 MsG0080047925.01.T01:CDS
TGAGGATCCAGAGGTTGTTG+AGG 0.588057 contig148end:+13895 MsG0080047925.01.T01:CDS
ATAATCATAATCAGCGGTGT+GGG 0.589439 contig148end:-11668 MsG0080047925.01.T01:intergenic
GAGAGAGAGTACGTTAGGGA+TGG 0.590043 contig148end:+11810 MsG0080047925.01.T01:CDS
TGAATGCCATTGTGGAGGAT+GGG 0.592525 contig148end:+12488 MsG0080047925.01.T01:CDS
GGTGCGTGTGCTTAGGATGT+GGG 0.592953 contig148end:+11208 MsG0080047925.01.T01:CDS
TGTTGATCCATCTATTGTTG+AGG 0.594848 contig148end:+13087 MsG0080047925.01.T01:CDS
TGCTAAAGAGACACCGGCCA+AGG 0.594898 contig148end:+13278 MsG0080047925.01.T01:CDS
TCGAGAAGACTGCATCTGCA+GGG 0.595551 contig148end:+13026 MsG0080047925.01.T01:CDS
CAACAATTGCCTTCTAATGG+TGG 0.596619 contig148end:-11446 MsG0080047925.01.T01:intergenic
AGGTGCGTGTGCTTAGGATG+TGG 0.597101 contig148end:+11207 MsG0080047925.01.T01:CDS
GAGGCTGTGAAATTTAGAGA+AGG 0.598448 contig148end:+12222 MsG0080047925.01.T01:CDS
AGGCTGTGAAATTTAGAGAA+GGG 0.600321 contig148end:+12223 MsG0080047925.01.T01:CDS
ATGTGAGGCTGTAAGTTTGG+CGG 0.600972 contig148end:+14178 MsG0080047925.01.T01:CDS
ACATCCAGGATCCACAGCTA+GGG 0.605603 contig148end:-14159 MsG0080047925.01.T01:intergenic
AAATGAAGACAAAGGTGGAG+AGG 0.612097 contig148end:+11584 MsG0080047925.01.T01:CDS
AGTTCACTTATCCCTGTGCA+TGG 0.617904 contig148end:+11613 MsG0080047925.01.T01:CDS
TCTGGTGCATATTACTGCAA+GGG 0.618450 contig148end:+12604 MsG0080047925.01.T01:CDS
AATAATCATAATCAGCGGTG+TGG 0.624084 contig148end:-11669 MsG0080047925.01.T01:intergenic
AGCTAAGAGAAATTTGCGCA+AGG 0.625659 contig148end:+14274 MsG0080047925.01.T01:CDS
CGAGAAGACTGCATCTGCAG+GGG 0.629581 contig148end:+13027 MsG0080047925.01.T01:CDS
GCATTGATGTTATGTCGTTG+TGG 0.630137 contig148end:+14537 MsG0080047925.01.T01:three_prime_UTR
CTGGTGCATATTACTGCAAG+GGG 0.631078 contig148end:+12605 MsG0080047925.01.T01:CDS
TCGGAGAAAGTCCATGCACA+GGG 0.632550 contig148end:-11624 MsG0080047925.01.T01:intergenic
ATTTCAAATGAAGACAAAGG+TGG 0.632682 contig148end:+11579 MsG0080047925.01.T01:CDS
GATATTTCAAATGAAGACAA+AGG 0.634663 contig148end:+11576 MsG0080047925.01.T01:CDS
ATTCTCTCCAGAAGATGATG+GGG 0.636639 contig148end:+11999 MsG0080047925.01.T01:CDS
CTATGAGTTGAATGCCATTG+TGG 0.639853 contig148end:+12480 MsG0080047925.01.T01:CDS
GTCGTGTGTCTGATACATCT+GGG 0.644547 contig148end:+13966 MsG0080047925.01.T01:CDS
CTAATGCGAGGACCAAGCGA+AGG 0.655277 contig148end:-12409 MsG0080047925.01.T01:intergenic
GGATGTTGCTAAAGAGACAC+CGG 0.657933 contig148end:+13272 MsG0080047925.01.T01:CDS
AACCAAATAATCATAATCAG+CGG 0.658464 contig148end:-11674 MsG0080047925.01.T01:intergenic
AATACTCCCATAAACCCAGA+GGG 0.663322 contig148end:-14509 MsG0080047925.01.T01:intergenic
TTCAAACTAACAATCTCAGG+AGG 0.664295 contig148end:-12980 MsG0080047925.01.T01:intergenic
TTTGCAGCAGACCCTAGCTG+TGG 0.668538 contig148end:+14148 MsG0080047925.01.T01:intron
TGAGTTGAGTGAATTGGGTG+AGG 0.670731 contig148end:+13877 MsG0080047925.01.T01:CDS
ATAAATCCCATCCTCCACAA+TGG 0.672201 contig148end:-12494 MsG0080047925.01.T01:intergenic
TCAATCGAAGGCCTAATGCG+AGG 0.683338 contig148end:-12421 MsG0080047925.01.T01:intergenic
CCTGTAGGGTTGAGACTGTG+TGG 0.692195 contig148end:+14376 MsG0080047925.01.T01:three_prime_UTR
TGAATTGGGTGAGGATCCAG+AGG 0.695337 contig148end:+13886 MsG0080047925.01.T01:CDS
CACTACCACCAAGAAAACCA+AGG 0.705071 contig148end:+14325 MsG0080047925.01.T01:CDS
TACTGCTGCTGAGAAGAATG+GGG 0.711790 contig148end:+14241 MsG0080047925.01.T01:CDS
TACGGTATGAGCCAACACCA+GGG 0.713804 contig148end:-11531 MsG0080047925.01.T01:intergenic
TTCTCTCCAGAAGATGATGG+GGG 0.715015 contig148end:+12000 MsG0080047925.01.T01:CDS
GCGTGTGCTTAGGATGTGGG+AGG 0.715566 contig148end:+11211 MsG0080047925.01.T01:CDS
TGAGTTGAATGCCATTGTGG+AGG 0.719334 contig148end:+12483 MsG0080047925.01.T01:CDS
ACGGTATGAGCCAACACCAG+GGG 0.725542 contig148end:-11530 MsG0080047925.01.T01:intergenic
AAATACTCCCATAAACCCAG+AGG 0.730541 contig148end:-14510 MsG0080047925.01.T01:intergenic
TTCCTGGTAGAGAGTCATGG+AGG 0.748573 contig148end:+11180 MsG0080047925.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAAATTTTAAAATTAAAAC+AGG - contig148end:11739-11758 MsG0080047925.01.T01:intergenic 10.0%
!! GTGTATATTTATTCTATTAA+CGG + contig148end:13302-13321 MsG0080047925.01.T01:intron 15.0%
!!! ATCAATATATTTTTCAGAAA+AGG - contig148end:13749-13768 MsG0080047925.01.T01:intergenic 15.0%
!!! ATTTGCATTTTGTAATTTAT+GGG + contig148end:12113-12132 MsG0080047925.01.T01:intron 15.0%
!!! GGTTTATATAAATTTAGAAT+AGG + contig148end:14045-14064 MsG0080047925.01.T01:intron 15.0%
!!! TATTTGCATTTTGTAATTTA+TGG + contig148end:12112-12131 MsG0080047925.01.T01:intron 15.0%
!!! TGTTATTCAAATATTTTGTA+TGG + contig148end:12684-12703 MsG0080047925.01.T01:intron 15.0%
!!! TTATATAAATTTAGAATAGG+AGG + contig148end:14048-14067 MsG0080047925.01.T01:intron 15.0%
!! AAGAATTTATGCAACAATTA+AGG - contig148end:14125-14144 MsG0080047925.01.T01:intergenic 20.0%
!! ATTAACGGAAAATTTATGTT+AGG + contig148end:13317-13336 MsG0080047925.01.T01:intron 20.0%
!! ATTACAAAATGCAAATAAAC+AGG - contig148end:12109-12128 MsG0080047925.01.T01:intergenic 20.0%
!! TATAAATTTCTCAATAGTAC+AGG - contig148end:11349-11368 MsG0080047925.01.T01:intergenic 20.0%
!! TGAGAAAAAAAATATTGGTA+AGG + contig148end:13694-13713 MsG0080047925.01.T01:intron 20.0%
!! TTATTGTAATTATGTGTTGT+AGG + contig148end:12717-12736 MsG0080047925.01.T01:intron 20.0%
!!! AACTCATAGATATTTTTCTT+GGG - contig148end:12469-12488 MsG0080047925.01.T01:intergenic 20.0%
!!! ACATTTTGCTTTTATAACTT+TGG + contig148end:14019-14038 MsG0080047925.01.T01:intron 20.0%
!!! AGCATTGAGAAAAAAAATAT+TGG + contig148end:13689-13708 MsG0080047925.01.T01:intron 20.0%
!!! ATTTGAAATATCAGCTTATA+TGG - contig148end:11568-11587 MsG0080047925.01.T01:intergenic 20.0%
!!! GATTATTTATTTTGTCTATC+AGG + contig148end:11303-11322 MsG0080047925.01.T01:intron 20.0%
!!! GGTTTAATTTAATATAACCT+TGG - contig148end:12658-12677 MsG0080047925.01.T01:intergenic 20.0%
! AAATATTTGAATAACAGCGA+TGG - contig148end:12680-12699 MsG0080047925.01.T01:intergenic 25.0%
! AACATAGATACTCATACAAT+AGG - contig148end:14584-14603 MsG0080047925.01.T01:intergenic 25.0%
! AACCAAATAATCATAATCAG+CGG - contig148end:11677-11696 MsG0080047925.01.T01:intergenic 25.0%
! AATATCACACAAACAATCAA+TGG - contig148end:11159-11178 MsG0080047925.01.T01:intergenic 25.0%
! AATATTTGAATAACAGCGAT+GGG - contig148end:12679-12698 MsG0080047925.01.T01:intergenic 25.0%
! AATTATGTGTTGTAGGTATA+AGG + contig148end:12724-12743 MsG0080047925.01.T01:intron 25.0%
! AGAAAAGGCTTCATAATTAA+TGG - contig148end:13734-13753 MsG0080047925.01.T01:intergenic 25.0%
! AGGTAGACATATTATATTAG+TGG + contig148end:14068-14087 MsG0080047925.01.T01:intron 25.0%
! CAAAAGAGTGAAACATTTAA+TGG + contig148end:13451-13470 MsG0080047925.01.T01:intron 25.0%
! GATATTTCAAATGAAGACAA+AGG + contig148end:11576-11595 MsG0080047925.01.T01:CDS 25.0%
! TAGAATAAATATACACACCT+TGG - contig148end:13298-13317 MsG0080047925.01.T01:intergenic 25.0%
! TGTTGCATTAACTAATTATG+TGG + contig148end:13640-13659 MsG0080047925.01.T01:intron 25.0%
! TTACAAAGCATAAAGTCTAA+TGG - contig148end:14428-14447 MsG0080047925.01.T01:intergenic 25.0%
! TTAGTTCACTTGCAATAAAT+TGG + contig148end:13351-13370 MsG0080047925.01.T01:intron 25.0%
! TTGCAAATAAAGACAAAAAC+CGG - contig148end:12906-12925 MsG0080047925.01.T01:intergenic 25.0%
!! AAACTATATTAACCCTGTTT+TGG + contig148end:11926-11945 MsG0080047925.01.T01:intron 25.0%
!! ACTCATAGATATTTTTCTTG+GGG - contig148end:12468-12487 MsG0080047925.01.T01:intergenic 25.0%
!! ATAAATTGGACAGTTTCTTT+TGG + contig148end:13365-13384 MsG0080047925.01.T01:intron 25.0%
!! CAACTCATAGATATTTTTCT+TGG - contig148end:12470-12489 MsG0080047925.01.T01:intergenic 25.0%
!! GATACTTTGGTAACTTAAAA+TGG - contig148end:13798-13817 MsG0080047925.01.T01:intergenic 25.0%
!!! TTGCTTTTATAACTTTGGTT+GGG + contig148end:14024-14043 MsG0080047925.01.T01:intron 25.0%
!!! TTTGCTTTTATAACTTTGGT+TGG + contig148end:14023-14042 MsG0080047925.01.T01:intron 25.0%
AACTACAAATGGAAAGCAAT+CGG - contig148end:13204-13223 MsG0080047925.01.T01:intergenic 30.0%
AATATAACCTTGGAACCATA+TGG - contig148end:12648-12667 MsG0080047925.01.T01:intergenic 30.0%
AATGAGAAAAACACCAAAAC+AGG - contig148end:11942-11961 MsG0080047925.01.T01:intergenic 30.0%
ACGGAAAATTTATGTTAGGT+AGG + contig148end:13321-13340 MsG0080047925.01.T01:intron 30.0%
AGGACAGAAAATTTATACCT+CGG - contig148end:12081-12100 MsG0080047925.01.T01:intergenic 30.0%
ATACAACAATTGCCTTCTAA+TGG - contig148end:11452-11471 MsG0080047925.01.T01:intergenic 30.0%
ATGAGAAAAACACCAAAACA+GGG - contig148end:11941-11960 MsG0080047925.01.T01:intergenic 30.0%
ATTTCAAATGAAGACAAAGG+TGG + contig148end:11579-11598 MsG0080047925.01.T01:CDS 30.0%
CAAAATGTTACCTTAAGAAC+TGG - contig148end:14007-14026 MsG0080047925.01.T01:intergenic 30.0%
CAAACTTCTTGGATCTTAAT+CGG - contig148end:11646-11665 MsG0080047925.01.T01:intergenic 30.0%
CATCAGAGAAAAACTACAAA+TGG - contig148end:13215-13234 MsG0080047925.01.T01:intergenic 30.0%
GAATCATCTATAACCAACTT+TGG - contig148end:12855-12874 MsG0080047925.01.T01:intergenic 30.0%
GCGAAAATTAAAATATTCCG+AGG + contig148end:12061-12080 MsG0080047925.01.T01:intron 30.0%
GCTGATTATGATTATTTGGT+TGG + contig148end:11676-11695 MsG0080047925.01.T01:CDS 30.0%
TAATTCTGTGTAGATGTTGT+TGG + contig148end:11765-11784 MsG0080047925.01.T01:intron 30.0%
TATATGGATGAATGGTAGTA+CGG - contig148end:11552-11571 MsG0080047925.01.T01:intergenic 30.0%
TATCAGCTTATATGGATGAA+TGG - contig148end:11560-11579 MsG0080047925.01.T01:intergenic 30.0%
TATCTGTTTATATGCAGAGA+GGG + contig148end:12143-12162 MsG0080047925.01.T01:intron 30.0%
TATGAACACGACTAGAATTT+GGG + contig148end:12182-12201 MsG0080047925.01.T01:CDS 30.0%
TGGTTAGTATATATGTGCTT+TGG - contig148end:13596-13615 MsG0080047925.01.T01:intergenic 30.0%
TTATCTGTTTATATGCAGAG+AGG + contig148end:12142-12161 MsG0080047925.01.T01:intron 30.0%
TTATGAACACGACTAGAATT+TGG + contig148end:12181-12200 MsG0080047925.01.T01:CDS 30.0%
! CATGTTTGATGGATCTTATA+GGG + contig148end:13051-13070 MsG0080047925.01.T01:CDS 30.0%
! TAGTTTTTCTCTGATGTTGT+GGG + contig148end:13219-13238 MsG0080047925.01.T01:intron 30.0%
! TCATGTTTGATGGATCTTAT+AGG + contig148end:13050-13069 MsG0080047925.01.T01:CDS 30.0%
!! GTATGTTTTTCAGAAGAAGT+TGG + contig148end:11468-11487 MsG0080047925.01.T01:CDS 30.0%
!! TTTTAGGAAATGGAACATAG+AGG - contig148end:14486-14505 MsG0080047925.01.T01:intergenic 30.0%
!!! TAACCACTGTTTTTATTTGC+TGG + contig148end:13610-13629 MsG0080047925.01.T01:intron 30.0%
!!! TGTTTTGGTGTTTTTCTCAT+TGG + contig148end:11941-11960 MsG0080047925.01.T01:intron 30.0%
!!! TTTTTTCTGTTGTGTGACTT+TGG + contig148end:12273-12292 MsG0080047925.01.T01:intron 30.0%
AAAACCCATGAATTGTTTGC+AGG + contig148end:13541-13560 MsG0080047925.01.T01:intron 35.0%
AAATACTGCTCCAGTTCTTA+AGG + contig148end:13994-14013 MsG0080047925.01.T01:CDS 35.0%
AACAATTAAGGTCTACAGAG+AGG - contig148end:14113-14132 MsG0080047925.01.T01:intergenic 35.0%
AACTCAATCCAGATCAAGTT+TGG - contig148end:14354-14373 MsG0080047925.01.T01:intergenic 35.0%
AAGAAATCCTCTTCAATCGA+AGG - contig148end:12436-12455 MsG0080047925.01.T01:intergenic 35.0%
AATAATCATAATCAGCGGTG+TGG - contig148end:11672-11691 MsG0080047925.01.T01:intergenic 35.0%
AATATCAGTGTTGCAATCCA+TGG + contig148end:12364-12383 MsG0080047925.01.T01:intron 35.0%
AATTTCACAGCCTCTTCAAA+AGG - contig148end:12216-12235 MsG0080047925.01.T01:intergenic 35.0%
ACTCAATCCAGATCAAGTTT+GGG - contig148end:14353-14372 MsG0080047925.01.T01:intergenic 35.0%
AGGCTGTGAAATTTAGAGAA+GGG + contig148end:12223-12242 MsG0080047925.01.T01:CDS 35.0%
AGGTATTAGAATCATGCTGA+GGG + contig148end:13400-13419 MsG0080047925.01.T01:intron 35.0%
ATAAATATACACACCTTGGC+CGG - contig148end:13294-13313 MsG0080047925.01.T01:intergenic 35.0%
ATAATCATAATCAGCGGTGT+GGG - contig148end:11671-11690 MsG0080047925.01.T01:intergenic 35.0%
ATGCAAATAAACAGGCAAAC+AGG - contig148end:12101-12120 MsG0080047925.01.T01:intergenic 35.0%
ATTTCCTAAAATCTCCCTCT+GGG + contig148end:14495-14514 MsG0080047925.01.T01:three_prime_UTR 35.0%
CAGAATTCCTCAACAATAGA+TGG - contig148end:13097-13116 MsG0080047925.01.T01:intergenic 35.0%
GATCAGGTTTCAAAAAGGTT+GGG - contig148end:11238-11257 MsG0080047925.01.T01:intergenic 35.0%
TAGGTATTAGAATCATGCTG+AGG + contig148end:13399-13418 MsG0080047925.01.T01:intron 35.0%
TATTGTTGTGGTTTCTTCAC+CGG + contig148end:12884-12903 MsG0080047925.01.T01:intron 35.0%
TGATCAGGTTTCAAAAAGGT+TGG - contig148end:11239-11258 MsG0080047925.01.T01:intergenic 35.0%
TGTTGATCCATCTATTGTTG+AGG + contig148end:13087-13106 MsG0080047925.01.T01:CDS 35.0%
TGTTTGTGTGATATTGTTCC+TGG + contig148end:11164-11183 MsG0080047925.01.T01:CDS 35.0%
TTAAACGACATGATTCACGA+TGG - contig148end:13523-13542 MsG0080047925.01.T01:intergenic 35.0%
TTCAAACTAACAATCTCAGG+AGG - contig148end:12983-13002 MsG0080047925.01.T01:intergenic 35.0%
TTGCCAGCAAATAAAAACAG+TGG - contig148end:13616-13635 MsG0080047925.01.T01:intergenic 35.0%
TTGGTTATAGATGATTCTCC+TGG + contig148end:12858-12877 MsG0080047925.01.T01:intron 35.0%
TTTGATGTGGTTACTATGCA+GGG + contig148end:11713-11732 MsG0080047925.01.T01:intron 35.0%
! AATGTTGTTGTTACTCCAGT+GGG + contig148end:13944-13963 MsG0080047925.01.T01:CDS 35.0%
! AGATTGTTAGTTTGAAGGGA+AGG + contig148end:12987-13006 MsG0080047925.01.T01:CDS 35.0%
! CACCGCTGATTATGATTATT+TGG + contig148end:11672-11691 MsG0080047925.01.T01:CDS 35.0%
! CCTGAGATTGTTAGTTTGAA+GGG + contig148end:12983-13002 MsG0080047925.01.T01:CDS 35.0%
! CTCACTTTGTTTGGATACTT+TGG - contig148end:13811-13830 MsG0080047925.01.T01:intergenic 35.0%
! GTAGTTTTTCTCTGATGTTG+TGG + contig148end:13218-13237 MsG0080047925.01.T01:intron 35.0%
! TAATGTTGTTGTTACTCCAG+TGG + contig148end:13943-13962 MsG0080047925.01.T01:CDS 35.0%
! TCCTGAGATTGTTAGTTTGA+AGG + contig148end:12982-13001 MsG0080047925.01.T01:CDS 35.0%
! TGGTGTTTTTCTCATTGGTA+AGG + contig148end:11946-11965 MsG0080047925.01.T01:intron 35.0%
!! AGCTATTGCGTTTTGATGTA+TGG + contig148end:13171-13190 MsG0080047925.01.T01:intron 35.0%
!! ATGTTGTTGGTTTGATGACT+GGG + contig148end:11778-11797 MsG0080047925.01.T01:CDS 35.0%
!! TTTCAGAAGAAGTTGGTAGA+AGG + contig148end:11475-11494 MsG0080047925.01.T01:CDS 35.0%
!!! AACCTTTTTGAAACCTGATC+AGG + contig148end:11238-11257 MsG0080047925.01.T01:CDS 35.0%
!!! CTGTTTTTATTTGCTGGCAA+TGG + contig148end:13616-13635 MsG0080047925.01.T01:intron 35.0%
!!! GATGGTTTTGATTGATGAGA+AGG + contig148end:11274-11293 MsG0080047925.01.T01:CDS 35.0%
AAAATCTCCCTCTGGGTTTA+TGG + contig148end:14502-14521 MsG0080047925.01.T01:three_prime_UTR 40.0%
AAATACTCCCATAAACCCAG+AGG - contig148end:14513-14532 MsG0080047925.01.T01:intergenic 40.0%
AAATCTCCCTCTGGGTTTAT+GGG + contig148end:14503-14522 MsG0080047925.01.T01:three_prime_UTR 40.0%
AAATGAAGACAAAGGTGGAG+AGG + contig148end:11584-11603 MsG0080047925.01.T01:CDS 40.0%
AATACTCCCATAAACCCAGA+GGG - contig148end:14512-14531 MsG0080047925.01.T01:intergenic 40.0%
AATGAAGACAAAGGTGGAGA+GGG + contig148end:11585-11604 MsG0080047925.01.T01:CDS 40.0%
AATGGAAAGCAATCGGTCTT+AGG - contig148end:13197-13216 MsG0080047925.01.T01:intergenic 40.0%
AATGTGCAGTTTGTGTCTGA+TGG + contig148end:13845-13864 MsG0080047925.01.T01:intron 40.0%
AGATTCATGCCACCATTAGA+AGG + contig148end:11437-11456 MsG0080047925.01.T01:CDS 40.0%
AGCATCTCACTCACTTTGTT+TGG - contig148end:13820-13839 MsG0080047925.01.T01:intergenic 40.0%
AGCCTGATCAGGTTTCAAAA+AGG - contig148end:11243-11262 MsG0080047925.01.T01:intergenic 40.0%
AGCTAAGAGAAATTTGCGCA+AGG + contig148end:14274-14293 MsG0080047925.01.T01:CDS 40.0%
ATAAATCCCATCCTCCACAA+TGG - contig148end:12497-12516 MsG0080047925.01.T01:intergenic 40.0%
ATGGATCTTATAGGGTGAAG+AGG + contig148end:13059-13078 MsG0080047925.01.T01:CDS 40.0%
ATGTGTTCCATATGGTTCCA+AGG + contig148end:12638-12657 MsG0080047925.01.T01:CDS 40.0%
ATTCTCTCCAGAAGATGATG+GGG + contig148end:11999-12018 MsG0080047925.01.T01:CDS 40.0%
CAACAATTGCCTTCTAATGG+TGG - contig148end:11449-11468 MsG0080047925.01.T01:intergenic 40.0%
CAGTAATATGCACCAGAATC+AGG - contig148end:12601-12620 MsG0080047925.01.T01:intergenic 40.0%
CATTTCCTAAAATCTCCCTC+TGG + contig148end:14494-14513 MsG0080047925.01.T01:three_prime_UTR 40.0%
CCCTTCAAACTAACAATCTC+AGG - contig148end:12986-13005 MsG0080047925.01.T01:intergenic 40.0%
CTAGCCTGCAAACAATTCAT+GGG - contig148end:13548-13567 MsG0080047925.01.T01:intergenic 40.0%
CTCTGTTAGACTGAAAATGC+TGG + contig148end:12950-12969 MsG0080047925.01.T01:intron 40.0%
GAAACCACAACAATATCACC+AGG - contig148end:12879-12898 MsG0080047925.01.T01:intergenic 40.0%
GACACAAATTGAGGATTTCG+TGG + contig148end:13919-13938 MsG0080047925.01.T01:CDS 40.0%
GAGGCTGTGAAATTTAGAGA+AGG + contig148end:12222-12241 MsG0080047925.01.T01:CDS 40.0%
GATTCTCTCCAGAAGATGAT+GGG + contig148end:11998-12017 MsG0080047925.01.T01:CDS 40.0%
GCAAATTGAACCACAACAAC+CGG - contig148end:12043-12062 MsG0080047925.01.T01:intergenic 40.0%
GCAGTGTTTGTGATGTTTGA+TGG + contig148end:12779-12798 MsG0080047925.01.T01:CDS 40.0%
GGATGGAAAGGTTACTAAGA+TGG + contig148end:11827-11846 MsG0080047925.01.T01:CDS 40.0%
GGTTGTCTACTATGTTGTGT+TGG + contig148end:14397-14416 MsG0080047925.01.T01:three_prime_UTR 40.0%
GTTTGATGTGGTTACTATGC+AGG + contig148end:11712-11731 MsG0080047925.01.T01:intron 40.0%
TCTAGCCTGCAAACAATTCA+TGG - contig148end:13549-13568 MsG0080047925.01.T01:intergenic 40.0%
TCTGGTGCATATTACTGCAA+GGG + contig148end:12604-12623 MsG0080047925.01.T01:CDS 40.0%
TGATTCTCTCCAGAAGATGA+TGG + contig148end:11997-12016 MsG0080047925.01.T01:CDS 40.0%
TGGATCTTATAGGGTGAAGA+GGG + contig148end:13060-13079 MsG0080047925.01.T01:CDS 40.0%
TGTGAAGCATGTGTTCCATA+TGG + contig148end:12630-12649 MsG0080047925.01.T01:CDS 40.0%
TGTTGAGGAGACACAAATTG+AGG + contig148end:13910-13929 MsG0080047925.01.T01:CDS 40.0%
TTAGTTTCTGCAGCCAAAGT+TGG + contig148end:12839-12858 MsG0080047925.01.T01:intron 40.0%
TTCTCCTGGTGATATTGTTG+TGG + contig148end:12872-12891 MsG0080047925.01.T01:intron 40.0%
TTCTGGTGCATATTACTGCA+AGG + contig148end:12603-12622 MsG0080047925.01.T01:CDS 40.0%
TTTAAAAGTCCAGACCTGTC+AGG + contig148end:14215-14234 MsG0080047925.01.T01:CDS 40.0%
! CTATGAGTTGAATGCCATTG+TGG + contig148end:12480-12499 MsG0080047925.01.T01:CDS 40.0%
! GATGCTGAGTTGAGTGAATT+GGG + contig148end:13872-13891 MsG0080047925.01.T01:CDS 40.0%
! GCATTGATGTTATGTCGTTG+TGG + contig148end:14537-14556 MsG0080047925.01.T01:three_prime_UTR 40.0%
! GGGAAGGATGATGTTGTTTA+AGG + contig148end:13003-13022 MsG0080047925.01.T01:CDS 40.0%
! TAAACCCAGAGGGAGATTTT+AGG - contig148end:14502-14521 MsG0080047925.01.T01:intergenic 40.0%
! TTATGTTGTCTGTGCTGTTG+TGG + contig148end:12513-12532 MsG0080047925.01.T01:CDS 40.0%
!! CAGAGGGAGATTTTAGGAAA+TGG - contig148end:14496-14515 MsG0080047925.01.T01:intergenic 40.0%
!! GATGTTGTTGGTTTGATGAC+TGG + contig148end:11777-11796 MsG0080047925.01.T01:intron 40.0%
!! TAGTGATTTGGTAGAGGATC+TGG + contig148end:13251-13270 MsG0080047925.01.T01:CDS 40.0%
!! TCTTTTGGTTGCAGTAGTGT+AGG + contig148end:13380-13399 MsG0080047925.01.T01:intron 40.0%
!! TGAGGTTAGTGATTTGGTAG+AGG + contig148end:13245-13264 MsG0080047925.01.T01:CDS 40.0%
AAACTTACAGCCTCACATCC+AGG - contig148end:14176-14195 MsG0080047925.01.T01:intergenic 45.0%
AAGGTTGAGTGTGCGTTGTT+TGG + contig148end:11965-11984 MsG0080047925.01.T01:intron 45.0%
ACCCTACGAAAGGAAGGAAA+AGG - contig148end:11413-11432 MsG0080047925.01.T01:intergenic 45.0%
AGAGTACGTTAGGGATGGAA+AGG + contig148end:11815-11834 MsG0080047925.01.T01:CDS 45.0%
AGCGAAGGAACAACACTAGA+AGG - contig148end:12397-12416 MsG0080047925.01.T01:intergenic 45.0%
AGTTCACTTATCCCTGTGCA+TGG + contig148end:11613-11632 MsG0080047925.01.T01:CDS 45.0%
ATCCCTAACGTACTCTCTCT+CGG - contig148end:11811-11830 MsG0080047925.01.T01:intergenic 45.0%
ATGTGAGGCTGTAAGTTTGG+CGG + contig148end:14178-14197 MsG0080047925.01.T01:CDS 45.0%
CACTACCACCAAGAAAACCA+AGG + contig148end:14325-14344 MsG0080047925.01.T01:CDS 45.0%
CACTAGAAGGTTCAATGCCA+TGG - contig148end:12384-12403 MsG0080047925.01.T01:intergenic 45.0%
CATTAGGCCTTCGATTGAAG+AGG + contig148end:12426-12445 MsG0080047925.01.T01:CDS 45.0%
CCCTACGAAAGGAAGGAAAA+GGG - contig148end:11412-11431 MsG0080047925.01.T01:intergenic 45.0%
CTACTGCTGCTGAGAAGAAT+GGG + contig148end:14240-14259 MsG0080047925.01.T01:CDS 45.0%
CTGCATGAAGTCATTGCCTT+TGG + contig148end:13495-13514 MsG0080047925.01.T01:intron 45.0%
CTGGATTGAGTTCACCTGTA+GGG + contig148end:14362-14381 MsG0080047925.01.T01:exon 45.0%
CTGGTGCATATTACTGCAAG+GGG + contig148end:12605-12624 MsG0080047925.01.T01:CDS 45.0%
GGAATTCTGCACTTCTGTCA+AGG + contig148end:13108-13127 MsG0080047925.01.T01:CDS 45.0%
GGATGTTGCTAAAGAGACAC+CGG + contig148end:13272-13291 MsG0080047925.01.T01:CDS 45.0%
GTAACCACATCAAACCACAC+TGG - contig148end:11707-11726 MsG0080047925.01.T01:intergenic 45.0%
GTCGTGTGTCTGATACATCT+GGG + contig148end:13966-13985 MsG0080047925.01.T01:CDS 45.0%
TACTGCTGCTGAGAAGAATG+GGG + contig148end:14241-14260 MsG0080047925.01.T01:CDS 45.0%
TAGAGAGTCATGGAGGATCA+AGG + contig148end:11187-11206 MsG0080047925.01.T01:CDS 45.0%
TCAGGCTAACTCTGTTGAGA+TGG + contig148end:11256-11275 MsG0080047925.01.T01:CDS 45.0%
TCTGGATTGAGTTCACCTGT+AGG + contig148end:14361-14380 MsG0080047925.01.T01:exon 45.0%
TGAATGCCATTGTGGAGGAT+GGG + contig148end:12488-12507 MsG0080047925.01.T01:CDS 45.0%
TGGATGTGAGGCTGTAAGTT+TGG + contig148end:14175-14194 MsG0080047925.01.T01:CDS 45.0%
TTCACAGCCTCTTCAAAAGG+AGG - contig148end:12213-12232 MsG0080047925.01.T01:intergenic 45.0%
TTGAATGCCATTGTGGAGGA+TGG + contig148end:12487-12506 MsG0080047925.01.T01:CDS 45.0%
TTGTTCCTGGTAGAGAGTCA+TGG + contig148end:11177-11196 MsG0080047925.01.T01:CDS 45.0%
TTTCCTTCCTTTCGTAGGGT+GGG + contig148end:11413-11432 MsG0080047925.01.T01:intron 45.0%
! CCCTTTTCCTTCCTTTCGTA+GGG + contig148end:11409-11428 MsG0080047925.01.T01:intron 45.0%
! GGATGCTGAGTTGAGTGAAT+TGG + contig148end:13871-13890 MsG0080047925.01.T01:CDS 45.0%
! GGTGACATGCAACTGTTTCT+TGG + contig148end:12800-12819 MsG0080047925.01.T01:CDS 45.0%
! GTTGTGGAAGGTTTGGTTGA+GGG + contig148end:12529-12548 MsG0080047925.01.T01:CDS 45.0%
! TCAACAGAGTTAGCCTGATC+AGG - contig148end:11254-11273 MsG0080047925.01.T01:intergenic 45.0%
! TCCCTTTTCCTTCCTTTCGT+AGG + contig148end:11408-11427 MsG0080047925.01.T01:intron 45.0%
! TCTAGTGTTGTTCCTTCGCT+TGG + contig148end:12397-12416 MsG0080047925.01.T01:CDS 45.0%
! TGAGTTGAATGCCATTGTGG+AGG + contig148end:12483-12502 MsG0080047925.01.T01:CDS 45.0%
! TGAGTTGAGTGAATTGGGTG+AGG + contig148end:13877-13896 MsG0080047925.01.T01:CDS 45.0%
! TGTTGTGGAAGGTTTGGTTG+AGG + contig148end:12528-12547 MsG0080047925.01.T01:CDS 45.0%
! TTCCGAGAGAGAGTACGTTA+GGG + contig148end:11806-11825 MsG0080047925.01.T01:CDS 45.0%
! TTCTCTCCAGAAGATGATGG+GGG + contig148end:12000-12019 MsG0080047925.01.T01:CDS 45.0%
! TTGTGGAAGGTTTGGTTGAG+GGG + contig148end:12530-12549 MsG0080047925.01.T01:CDS 45.0%
! TTTTCCTTCCTTTCGTAGGG+TGG + contig148end:11412-11431 MsG0080047925.01.T01:intron 45.0%
!! AGGAGTGTTACTCCTGATTC+TGG + contig148end:12586-12605 MsG0080047925.01.T01:CDS 45.0%
!! CAGAAGAAGTTGGTAGAAGG+AGG + contig148end:11478-11497 MsG0080047925.01.T01:CDS 45.0%
!! CTTGGTTTTCTTGGTGGTAG+TGG - contig148end:14327-14346 MsG0080047925.01.T01:intergenic 45.0%
!! GGGTTCTGAGGTTAGTGATT+TGG + contig148end:13239-13258 MsG0080047925.01.T01:CDS 45.0%
!! GGTGAATCCTCCTTTTGAAG+AGG + contig148end:12203-12222 MsG0080047925.01.T01:CDS 45.0%
!! TTTGGGAGCCTTGGTTTTCT+TGG - contig148end:14336-14355 MsG0080047925.01.T01:intergenic 45.0%
ACATCCAGGATCCACAGCTA+GGG - contig148end:14162-14181 MsG0080047925.01.T01:intergenic 50.0%
ATCCTCCATGACTCTCTACC+AGG - contig148end:11185-11204 MsG0080047925.01.T01:intergenic 50.0%
ATCGGAGAAAGTCCATGCAC+AGG - contig148end:11628-11647 MsG0080047925.01.T01:intergenic 50.0%
ATGATTCACGATGGCGCCAA+AGG - contig148end:13514-13533 MsG0080047925.01.T01:intergenic 50.0%
CAAGGCTCCCAAACTTGATC+TGG + contig148end:14343-14362 MsG0080047925.01.T01:CDS 50.0%
CAGATCAAGTTTGGGAGCCT+TGG - contig148end:14345-14364 MsG0080047925.01.T01:intergenic 50.0%
CTCTGATGTTGTGGGTTCTG+AGG + contig148end:13227-13246 MsG0080047925.01.T01:CDS 50.0%
GAATCTTCCCACCCTACGAA+AGG - contig148end:11423-11442 MsG0080047925.01.T01:intergenic 50.0%
GAGTCCAGTGTGGTTTGATG+TGG + contig148end:11700-11719 MsG0080047925.01.T01:intron 50.0%
GCTACTGCTGCTGAGAAGAA+TGG + contig148end:14239-14258 MsG0080047925.01.T01:CDS 50.0%
GGTCGTGTGTCTGATACATC+TGG + contig148end:13965-13984 MsG0080047925.01.T01:CDS 50.0%
TACGGTATGAGCCAACACCA+GGG - contig148end:11534-11553 MsG0080047925.01.T01:intergenic 50.0%
TCAATCGAAGGCCTAATGCG+AGG - contig148end:12424-12443 MsG0080047925.01.T01:intergenic 50.0%
TCATACTTTGCAGTTGCCCC+TGG + contig148end:11514-11533 MsG0080047925.01.T01:CDS 50.0%
TCGAGAAGACTGCATCTGCA+GGG + contig148end:13026-13045 MsG0080047925.01.T01:CDS 50.0%
TCGGAGAAAGTCCATGCACA+GGG - contig148end:11627-11646 MsG0080047925.01.T01:intergenic 50.0%
TCTGCAGGGGTCATGTTTGA+TGG + contig148end:13040-13059 MsG0080047925.01.T01:CDS 50.0%
TGAATTGGGTGAGGATCCAG+AGG + contig148end:13886-13905 MsG0080047925.01.T01:CDS 50.0%
TGAGGATCCAGAGGTTGTTG+AGG + contig148end:13895-13914 MsG0080047925.01.T01:CDS 50.0%
TGTGTCTCCTCAACAACCTC+TGG - contig148end:13905-13924 MsG0080047925.01.T01:intergenic 50.0%
TTCCTGGTAGAGAGTCATGG+AGG + contig148end:11180-11199 MsG0080047925.01.T01:CDS 50.0%
! CTGTGCTGTTGTGGAAGGTT+TGG + contig148end:12522-12541 MsG0080047925.01.T01:CDS 50.0%
! CTTCCGAGAGAGAGTACGTT+AGG + contig148end:11805-11824 MsG0080047925.01.T01:CDS 50.0%
! GAGAGAGAGTACGTTAGGGA+TGG + contig148end:11810-11829 MsG0080047925.01.T01:CDS 50.0%
! GCAGTTTGTGTCTGATGGTG+TGG + contig148end:13850-13869 MsG0080047925.01.T01:intron 50.0%
! GCTGTAAGTTTGGCGGATGA+TGG + contig148end:14185-14204 MsG0080047925.01.T01:CDS 50.0%
! GTTGTCTGTGCTGTTGTGGA+AGG + contig148end:12517-12536 MsG0080047925.01.T01:CDS 50.0%
! TGTGGAAGGTTTGGTTGAGG+GGG + contig148end:12531-12550 MsG0080047925.01.T01:CDS 50.0%
!! AGAAGATGATGGGGGAAGCT+GGG + contig148end:12008-12027 MsG0080047925.01.T01:CDS 50.0%
!! TTTGGTTGGTGAGTCCAGTG+TGG + contig148end:11690-11709 MsG0080047925.01.T01:intron 50.0%
ACGGTATGAGCCAACACCAG+GGG - contig148end:11533-11552 MsG0080047925.01.T01:intergenic 55.0%
AGCTGTGGATCCTGGATGTG+AGG + contig148end:14163-14182 MsG0080047925.01.T01:CDS 55.0%
AGGTGCGTGTGCTTAGGATG+TGG + contig148end:11207-11226 MsG0080047925.01.T01:CDS 55.0%
ATCCTGCGCGTCGTTGTCAT+AGG + contig148end:12566-12585 MsG0080047925.01.T01:CDS 55.0%
CACATCCAGGATCCACAGCT+AGG - contig148end:14163-14182 MsG0080047925.01.T01:intergenic 55.0%
CAGCTTCCCCCATCATCTTC+TGG - contig148end:12009-12028 MsG0080047925.01.T01:intergenic 55.0%
CCACACAGTCTCAACCCTAC+AGG - contig148end:14379-14398 MsG0080047925.01.T01:intergenic 55.0%
CCTGTAGGGTTGAGACTGTG+TGG + contig148end:14376-14395 MsG0080047925.01.T01:three_prime_UTR 55.0%
CGAGAAGACTGCATCTGCAG+GGG + contig148end:13027-13046 MsG0080047925.01.T01:CDS 55.0%
CTAATGCGAGGACCAAGCGA+AGG - contig148end:12412-12431 MsG0080047925.01.T01:intergenic 55.0%
CTTCCCACCCTACGAAAGGA+AGG - contig148end:11419-11438 MsG0080047925.01.T01:intergenic 55.0%
CTTCGCTTGGTCCTCGCATT+AGG + contig148end:12410-12429 MsG0080047925.01.T01:CDS 55.0%
GGATCAAGGTGCGTGTGCTT+AGG + contig148end:11201-11220 MsG0080047925.01.T01:CDS 55.0%
GGTGCGTGTGCTTAGGATGT+GGG + contig148end:11208-11227 MsG0080047925.01.T01:CDS 55.0%
GTACGGTATGAGCCAACACC+AGG - contig148end:11535-11554 MsG0080047925.01.T01:intergenic 55.0%
GTATCAGACACACGACCCAC+TGG - contig148end:13962-13981 MsG0080047925.01.T01:intergenic 55.0%
GTCGAGAAGACTGCATCTGC+AGG + contig148end:13025-13044 MsG0080047925.01.T01:CDS 55.0%
GTTTGGTTGAGGGGGAGGAT+TGG + contig148end:12539-12558 MsG0080047925.01.T01:CDS 55.0%
TGCTAAAGAGACACCGGCCA+AGG + contig148end:13278-13297 MsG0080047925.01.T01:CDS 55.0%
TTTGCAGCAGACCCTAGCTG+TGG + contig148end:14148-14167 MsG0080047925.01.T01:intron 55.0%
TTTGCAGTTGCCCCTGGTGT+TGG + contig148end:11520-11539 MsG0080047925.01.T01:CDS 55.0%
! CGCAAGGCATTTGACGCAGT+TGG + contig148end:14290-14309 MsG0080047925.01.T01:CDS 55.0%
! GGAAGGATTGCCGGTTGTTG+TGG + contig148end:12030-12049 MsG0080047925.01.T01:intron 55.0%
!! CAGAAGATGATGGGGGAAGC+TGG + contig148end:12007-12026 MsG0080047925.01.T01:CDS 55.0%
!! GAAGATGATGGGGGAAGCTG+GGG + contig148end:12009-12028 MsG0080047925.01.T01:CDS 55.0%
!! GGGAGCCTTGGTTTTCTTGG+TGG - contig148end:14333-14352 MsG0080047925.01.T01:intergenic 55.0%
CAGACCCTAGCTGTGGATCC+TGG + contig148end:14155-14174 MsG0080047925.01.T01:intron 60.0%
CAGCAGCAGTAGCTCCTGAC+AGG - contig148end:14232-14251 MsG0080047925.01.T01:intergenic 60.0%
CGGTGTGGGCGCAAACTTCT+TGG - contig148end:11657-11676 MsG0080047925.01.T01:intergenic 60.0%
CTCCTATGACAACGACGCGC+AGG - contig148end:12571-12590 MsG0080047925.01.T01:intergenic 60.0%
GCAGTAGCTCCTGACAGGTC+TGG - contig148end:14227-14246 MsG0080047925.01.T01:intergenic 60.0%
GCGTGTGCTTAGGATGTGGG+AGG + contig148end:11211-11230 MsG0080047925.01.T01:CDS 60.0%
GGAAGCTGGGGAAGGATTGC+CGG + contig148end:12021-12040 MsG0080047925.01.T01:CDS 60.0%
TGGTTGAGGGGGAGGATTGG+TGG + contig148end:12542-12561 MsG0080047925.01.T01:CDS 60.0%
! ATGATGGGGGAAGCTGGGGA+AGG + contig148end:12013-12032 MsG0080047925.01.T01:CDS 60.0%
! GGAAGGTTTGGTTGAGGGGG+AGG + contig148end:12534-12553 MsG0080047925.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
contig148end gene 11146 14624 11146 ID=MsG0080047925.01;Name=MsG0080047925.01
contig148end mRNA 11146 14624 11146 ID=MsG0080047925.01.T01;Parent=MsG0080047925.01;Name=MsG0080047925.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0.7|0.54|1|1|1|11|254|553
contig148end exon 14158 14624 14158 ID=MsG0080047925.01.T01:exon:3042;Parent=MsG0080047925.01.T01
contig148end exon 13854 14015 13854 ID=MsG0080047925.01.T01:exon:3041;Parent=MsG0080047925.01.T01
contig148end exon 13222 13299 13222 ID=MsG0080047925.01.T01:exon:3040;Parent=MsG0080047925.01.T01
contig148end exon 12959 13129 12959 ID=MsG0080047925.01.T01:exon:3039;Parent=MsG0080047925.01.T01
contig148end exon 12739 12856 12739 ID=MsG0080047925.01.T01:exon:3038;Parent=MsG0080047925.01.T01
contig148end exon 12372 12659 12372 ID=MsG0080047925.01.T01:exon:3037;Parent=MsG0080047925.01.T01
contig148end exon 12177 12244 12177 ID=MsG0080047925.01.T01:exon:3036;Parent=MsG0080047925.01.T01
contig148end exon 11968 12042 11968 ID=MsG0080047925.01.T01:exon:3035;Parent=MsG0080047925.01.T01
contig148end exon 11778 11848 11778 ID=MsG0080047925.01.T01:exon:3034;Parent=MsG0080047925.01.T01
contig148end exon 11430 11697 11430 ID=MsG0080047925.01.T01:exon:3033;Parent=MsG0080047925.01.T01
contig148end exon 11146 11295 11146 ID=MsG0080047925.01.T01:exon:3032;Parent=MsG0080047925.01.T01
contig148end CDS 11146 11295 11146 ID=MsG0080047925.01.T01:cds;Parent=MsG0080047925.01.T01
contig148end CDS 11430 11697 11430 ID=MsG0080047925.01.T01:cds;Parent=MsG0080047925.01.T01
contig148end CDS 11778 11848 11778 ID=MsG0080047925.01.T01:cds;Parent=MsG0080047925.01.T01
contig148end CDS 11968 12042 11968 ID=MsG0080047925.01.T01:cds;Parent=MsG0080047925.01.T01
contig148end CDS 12177 12244 12177 ID=MsG0080047925.01.T01:cds;Parent=MsG0080047925.01.T01
contig148end CDS 12372 12659 12372 ID=MsG0080047925.01.T01:cds;Parent=MsG0080047925.01.T01
contig148end CDS 12739 12856 12739 ID=MsG0080047925.01.T01:cds;Parent=MsG0080047925.01.T01
contig148end CDS 12959 13129 12959 ID=MsG0080047925.01.T01:cds;Parent=MsG0080047925.01.T01
contig148end CDS 13222 13299 13222 ID=MsG0080047925.01.T01:cds;Parent=MsG0080047925.01.T01
contig148end CDS 13854 14015 13854 ID=MsG0080047925.01.T01:cds;Parent=MsG0080047925.01.T01
contig148end CDS 14158 14370 14158 ID=MsG0080047925.01.T01:cds;Parent=MsG0080047925.01.T01
contig148end three_prime_UTR 14371 14624 14371 ID=MsG0080047925.01.T01:three_prime_utr;Parent=MsG0080047925.01.T01
Gene Sequence

>MsG0080047925.01.T01

ATGGATAAATCCATTGATTGTTTGTGTGATATTGTTCCTGGTAGAGAGTCATGGAGGATCAAGGTGCGTGTGCTTAGGATGTGGGAGGTCCCAACCTTTTTGAAACCTGATCAGGCTAACTCTGTTGAGATGGTTTTGATTGATGAGAAGGGTGGGAAGATTCATGCCACCATTAGAAGGCAATTGTTGTATGTTTTTCAGAAGAAGTTGGTAGAAGGAGGAGTGTACAAGATGTCATACTTTGCAGTTGCCCCTGGTGTTGGCTCATACCGTACTACCATTCATCCATATAAGCTGATATTTCAAATGAAGACAAAGGTGGAGAGGGTTGAGAGTTCACTTATCCCTGTGCATGGACTTTCTCCGATTAAGATCCAAGAAGTTTGCGCCCACACCGCTGATTATGATTATTTGGTTGATGTTGTTGGTTTGATGACTGGGATTTCTTCCGAGAGAGAGTACGTTAGGGATGGAAAGGTTACTAAGATGGTTGAGTGTGCGTTGTTTGGAAGCTATGTTGATTCTCTCCAGAAGATGATGGGGGAAGCTGGGGAAGGATTGCCGAATGTTATGAACACGACTAGAATTTGGGTGAATCCTCCTTTTGAAGAGGCTGTGAAATTTAGAGAAGGTGTTGCAATCCATGGCATTGAACCTTCTAGTGTTGTTCCTTCGCTTGGTCCTCGCATTAGGCCTTCGATTGAAGAGGATTTCTTGCGTAATCACCCCAAGAAAAATATCTATGAGTTGAATGCCATTGTGGAGGATGGGATTTATGTTGTCTGTGCTGTTGTGGAAGGTTTGGTTGAGGGGGAGGATTGGTGGTATCCTGCGCGTCGTTGTCATAGGAGTGTTACTCCTGATTCTGGTGCATATTACTGCAAGGGGTGTGTGAAGCATGTGTTCCATATGGTTCCAAGGTATAAGGTGAAGCTCAGTGTGAGAGATTCTACATCAGATGCAGTGTTTGTGATGTTTGATGGTGACATGCAACTGTTTCTTGGTGAGCAGTGTAGCGACTTAGTTTCTGCAGCCAAAACTGAAAATGCTGGATTTTATCCTCCTGAGATTGTTAGTTTGAAGGGAAGGATGATGTTGTTTAAGGTCGAGAAGACTGCATCTGCAGGGGTCATGTTTGATGGATCTTATAGGGTGAAGAGGGTTTGTGTTGATCCATCTATTGTTGAGGAATTCTGCACTTCTGTCAAGTTTTTCTCTGATGTTGTGGGTTCTGAGGTTAGTGATTTGGTAGAGGATCTGGATGTTGCTAAAGAGACACCGGCCAAGTTTGTGTCTGATGGTGTGGATGCTGAGTTGAGTGAATTGGGTGAGGATCCAGAGGTTGTTGAGGAGACACAAATTGAGGATTTCGTGGCTAATGTTGTTGTTACTCCAGTGGGTCGTGTGTCTGATACATCTGGGTATGAAAATACTGCTCCAGTTCTTAAGACCCTAGCTGTGGATCCTGGATGTGAGGCTGTAAGTTTGGCGGATGATGGTACTGTCTTTAAAAGTCCAGACCTGTCAGGAGCTACTGCTGCTGAGAAGAATGGGGCTGTCAACAAAGCTAAGAGAAATTTGCGCAAGGCATTTGACGCAGTTGGTCGTGACAAGTCCACTACCACCAAGAAAACCAAGGCTCCCAAACTTGATCTGGATTGA

Protein sequence

>MsG0080047925.01.T01

MDKSIDCLCDIVPGRESWRIKVRVLRMWEVPTFLKPDQANSVEMVLIDEKGGKIHATIRRQLLYVFQKKLVEGGVYKMSYFAVAPGVGSYRTTIHPYKLIFQMKTKVERVESSLIPVHGLSPIKIQEVCAHTADYDYLVDVVGLMTGISSEREYVRDGKVTKMVECALFGSYVDSLQKMMGEAGEGLPNVMNTTRIWVNPPFEEAVKFREGVAIHGIEPSSVVPSLGPRIRPSIEEDFLRNHPKKNIYELNAIVEDGIYVVCAVVEGLVEGEDWWYPARRCHRSVTPDSGAYYCKGCVKHVFHMVPRYKVKLSVRDSTSDAVFVMFDGDMQLFLGEQCSDLVSAAKTENAGFYPPEIVSLKGRMMLFKVEKTASAGVMFDGSYRVKRVCVDPSIVEEFCTSVKFFSDVVGSEVSDLVEDLDVAKETPAKFVSDGVDAELSELGEDPEVVEETQIEDFVANVVVTPVGRVSDTSGYENTAPVLKTLAVDPGCEAVSLADDGTVFKSPDLSGATAAEKNGAVNKAKRNLRKAFDAVGRDKSTTTKKTKAPKLDLD*