AlfalfaGEDB | MsG0180005048.01

M. sativa cultivar ZhongmuNo.1 / MsG0180005048.01

KEGG: K11252
GO: GO:0000786 GO:0003677 GO:0046982
PFAM: PF00125

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005048.01.T01	XP_013469395.1	100	137	0	0	1	137	1	137	1.98E-91	271

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005048.01.T01	Q1S9I9	87.162	148	8	3	1	137	1	148	3.34E-75	223

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005048.01.T01	I3S6Z4	100.000	137	0	0	1	137	1	137	9.44e-92	271

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047815.01	MsG0180005048.01	0.841334	5.061156e-58	7.412008e-55
MsG0080048258.01	MsG0180005048.01	0.840991	6.229962e-58	9.027256e-55
MsG0080048775.01	MsG0180005048.01	0.866369	2.997608e-65	1.007832e-61
MsG0080048781.01	MsG0180005048.01	0.863083	3.206937e-64	9.603400e-61
MsG0180000718.01	MsG0180005048.01	0.829348	5.414664e-55	5.527855e-52
MsG0180001293.01	MsG0180005048.01	0.863904	1.784520e-64	5.498792e-61
MsG0180001719.01	MsG0180005048.01	0.827816	1.269186e-54	1.238751e-51
MsG0180002134.01	MsG0180005048.01	0.830291	3.190806e-55	3.347367e-52
MsG0180002218.01	MsG0180005048.01	0.895375	1.017859e-75	1.053193e-71
MsG0180002397.01	MsG0180005048.01	0.895054	1.378712e-75	1.407463e-71
MsG0180002583.01	MsG0180005048.01	0.862029	6.768427e-64	1.953919e-60
MsG0180003421.01	MsG0180005048.01	0.813225	2.850641e-51	1.850716e-48
MsG0180003485.01	MsG0180005048.01	0.849754	2.640121e-60	5.056604e-57
MsG0180003658.01	MsG0180005048.01	0.826653	2.410245e-54	2.274233e-51
MsG0180003698.01	MsG0180005048.01	0.849399	3.315046e-60	6.276432e-57
MsG0180003796.01	MsG0180005048.01	0.845633	3.596486e-59	6.031071e-56
MsG0180003857.01	MsG0180005048.01	0.863492	2.394501e-64	7.272048e-61
MsG0180004120.01	MsG0180005048.01	0.899532	1.804739e-77	2.241139e-73
MsG0180004126.01	MsG0180005048.01	0.826187	3.113795e-54	2.899372e-51
MsG0180004185.01	MsG0180005048.01	0.823252	1.530789e-53	1.311091e-50
MsG0180004299.01	MsG0180005048.01	0.841536	4.476172e-58	6.597429e-55
MsG0180004471.01	MsG0180005048.01	0.823904	1.077231e-53	9.398666e-51
MsG0180004475.01	MsG0180005048.01	0.843921	1.040758e-58	1.653399e-55
MsG0180004538.01	MsG0180005048.01	0.892577	1.396674e-74	1.284319e-70
MsG0180004583.01	MsG0180005048.01	0.877736	4.946617e-69	2.514973e-65
MsG0180004661.01	MsG0180005048.01	0.810886	9.221893e-51	5.626043e-48
MsG0180004835.01	MsG0180005048.01	0.818839	1.589428e-52	1.203053e-49
MsG0180004972.01	MsG0180005048.01	0.830574	2.719886e-55	2.876922e-52
MsG0180004994.01	MsG0180005048.01	0.859378	4.312686e-63	1.136741e-59
MsG0180004995.01	MsG0180005048.01	0.944986	7.092340e-104	1.053204e-98
MsG0180005002.01	MsG0180005048.01	0.819134	1.362090e-52	1.039315e-49
MsG0180005048.01	MsG0180006006.01	0.819368	1.205013e-52	9.254114e-50
MsG0180005048.01	MsG0180006062.01	0.853569	2.191325e-61	4.755669e-58
MsG0180005048.01	MsG0180006133.01	0.930293	2.021860e-93	1.186360e-88
MsG0180005048.01	MsG0280006540.01	0.840197	1.005319e-57	1.421431e-54
MsG0180005048.01	MsG0280006563.01	0.872584	2.843265e-67	1.196290e-63
MsG0180005048.01	MsG0280007003.01	0.840164	1.025283e-57	1.448245e-54
MsG0180005048.01	MsG0280007092.01	0.804751	1.858788e-49	9.662252e-47
MsG0180005048.01	MsG0280007431.01	0.822156	2.754517e-53	2.286931e-50
MsG0180005048.01	MsG0280007492.01	0.838617	2.585445e-57	3.482032e-54
MsG0180005048.01	MsG0280007919.01	0.859304	4.537789e-63	1.192892e-59
MsG0180005048.01	MsG0280009216.01	0.802649	5.075075e-49	2.499359e-46
MsG0180005048.01	MsG0280009866.01	0.816528	5.279244e-52	3.749957e-49
MsG0180005048.01	MsG0280010579.01	0.846169	2.570825e-59	4.386291e-56
MsG0180005048.01	MsG0280011083.01	0.853716	1.987638e-61	4.334587e-58
MsG0180005048.01	MsG0380012788.01	0.819543	1.099310e-52	8.484404e-50
MsG0180005048.01	MsG0380012956.01	0.864013	1.650389e-64	5.104618e-61
MsG0180005048.01	MsG0380013584.01	0.838564	2.667810e-57	3.587048e-54
MsG0180005048.01	MsG0380014542.01	0.827561	1.461940e-54	1.416336e-51
MsG0180005048.01	MsG0380014633.01	0.806756	7.046712e-50	3.856010e-47
MsG0180005048.01	MsG0380014666.01	0.928524	2.556123e-92	1.353788e-87
MsG0180005048.01	MsG0380014751.01	0.825305	5.040455e-54	4.576982e-51
MsG0180005048.01	MsG0380015058.01	0.834131	3.578697e-56	4.207679e-53
MsG0180005048.01	MsG0380015090.01	0.856181	3.827413e-62	9.056446e-59
MsG0180005048.01	MsG0380015219.01	0.883369	4.757267e-71	3.007562e-67
MsG0180005048.01	MsG0380015234.01	0.850439	1.697448e-60	3.325288e-57
MsG0180005048.01	MsG0380015340.01	0.854731	1.012743e-61	2.283725e-58
MsG0180005048.01	MsG0380015394.01	0.854957	8.707514e-62	1.978359e-58
MsG0180005048.01	MsG0380015402.01	0.817289	3.562686e-52	2.583885e-49
MsG0180005048.01	MsG0380015954.01	0.805893	1.071575e-49	5.735857e-47
MsG0180005048.01	MsG0380016027.01	0.853578	2.178455e-61	4.729415e-58
MsG0180005048.01	MsG0380016091.01	0.870780	1.126806e-66	4.437661e-63
MsG0180005048.01	MsG0380016092.01	0.849361	3.397890e-60	6.426141e-57
MsG0180005048.01	MsG0380016217.01	0.859337	4.435464e-63	1.167406e-59
MsG0180005048.01	MsG0380016225.01	0.897290	1.623547e-76	1.821791e-72
MsG0180005048.01	MsG0380017128.01	0.812527	4.054486e-51	2.584044e-48
MsG0180005048.01	MsG0380017164.01	0.804827	1.791493e-49	9.330862e-47
MsG0180005048.01	MsG0380017181.01	0.877462	6.163876e-69	3.102049e-65
MsG0180005048.01	MsG0380017282.01	0.886179	4.284746e-72	3.028454e-68
MsG0180005048.01	MsG0380017332.01	0.888365	6.296066e-73	4.864073e-69
MsG0180005048.01	MsG0380017361.01	0.829361	5.374519e-55	5.488899e-52
MsG0180005048.01	MsG0380017440.01	0.825765	3.921231e-54	3.607713e-51
MsG0180005048.01	MsG0380017588.01	0.821620	3.665848e-53	2.997492e-50
MsG0180005048.01	MsG0380017605.01	0.868338	7.032476e-66	2.534577e-62
MsG0180005048.01	MsG0380017632.01	0.855402	6.461312e-62	1.490111e-58
MsG0180005048.01	MsG0380017696.01	0.819341	1.221992e-52	9.377241e-50
MsG0180005048.01	MsG0380017932.01	0.833796	4.340543e-56	5.052939e-53
MsG0180005048.01	MsG0480018106.01	0.852891	3.428154e-61	7.271141e-58
MsG0180005048.01	MsG0480018228.01	0.859989	2.822852e-63	7.599095e-60
MsG0180005048.01	MsG0480018526.01	0.846776	1.755947e-59	3.055711e-56
MsG0180005048.01	MsG0480018785.01	0.877714	5.033106e-69	2.557034e-65
MsG0180005048.01	MsG0480020366.01	0.807673	4.506108e-50	2.525167e-47
MsG0180005048.01	MsG0480020398.01	0.875533	2.859005e-68	1.339594e-64
MsG0180005048.01	MsG0480020856.01	0.849053	4.139337e-60	7.750351e-57
MsG0180005048.01	MsG0480020918.01	0.808088	3.677882e-50	2.083667e-47
MsG0180005048.01	MsG0480020920.01	0.825495	4.544419e-54	4.148806e-51
MsG0180005048.01	MsG0480020921.01	0.882128	1.350519e-70	8.127114e-67
MsG0180005048.01	MsG0480020926.01	0.882449	1.032067e-70	6.289068e-67
MsG0180005048.01	MsG0480020927.01	0.800968	1.123546e-48	5.302638e-46
MsG0180005048.01	MsG0480020969.01	0.829850	4.086544e-55	4.233783e-52
MsG0180005048.01	MsG0480020970.01	0.855765	5.065206e-62	1.182266e-58
MsG0180005048.01	MsG0480020971.01	0.881685	1.955073e-70	1.156464e-66
MsG0180005048.01	MsG0480021015.01	0.870162	1.797402e-66	6.923079e-63
MsG0180005048.01	MsG0480021016.01	0.862660	4.329332e-64	1.277674e-60
MsG0180005048.01	MsG0480021048.01	0.833704	4.576749e-56	5.312448e-53
MsG0180005048.01	MsG0480021100.01	0.870967	9.773157e-67	3.875308e-63
MsG0180005048.01	MsG0480021252.01	0.858607	7.333091e-63	1.882251e-59
MsG0180005048.01	MsG0480021301.01	0.929738	4.513010e-93	2.561847e-88
MsG0180005048.01	MsG0480021302.01	0.845049	5.173394e-59	8.515426e-56
MsG0180005048.01	MsG0480021456.01	0.821171	4.652139e-53	3.756913e-50
MsG0180005048.01	MsG0480021704.01	0.825820	3.805659e-54	3.506853e-51
MsG0180005048.01	MsG0480021773.01	0.853355	2.524403e-61	5.439386e-58
MsG0180005048.01	MsG0480021901.01	0.839170	1.859367e-57	2.546520e-54
MsG0180005048.01	MsG0480021902.01	0.876817	1.032367e-68	5.076132e-65
MsG0180005048.01	MsG0480022307.01	0.898403	5.492092e-77	6.480725e-73
MsG0180005048.01	MsG0480022320.01	0.816780	4.635314e-52	3.315473e-49
MsG0180005048.01	MsG0480022378.01	0.809224	2.103289e-50	1.227910e-47
MsG0180005048.01	MsG0480022442.01	0.840637	7.710796e-58	1.105152e-54
MsG0180005048.01	MsG0480022559.01	0.825021	5.882482e-54	5.298842e-51
MsG0180005048.01	MsG0480022784.01	0.896489	3.513513e-76	3.809238e-72
MsG0180005048.01	MsG0480022931.01	0.803882	2.819565e-49	1.433218e-46
MsG0180005048.01	MsG0480022982.01	0.869511	2.931797e-66	1.103394e-62
MsG0180005048.01	MsG0480022991.01	0.848306	6.667199e-60	1.218325e-56
MsG0180005048.01	MsG0480023003.01	0.885711	6.424661e-72	4.456661e-68
MsG0180005048.01	MsG0480023194.01	0.841795	3.826314e-58	5.684824e-55
MsG0180005048.01	MsG0480023296.01	0.827087	1.898337e-54	1.814011e-51
MsG0180005048.01	MsG0480023424.01	0.919976	2.292751e-87	7.576681e-83
MsG0180005048.01	MsG0480023426.01	0.895369	1.023569e-75	1.058875e-71
MsG0180005048.01	MsG0480023428.01	0.865099	7.549907e-65	2.426892e-61
MsG0180005048.01	MsG0480023653.01	0.860995	1.399596e-63	3.899845e-60
MsG0180005048.01	MsG0480023672.01	0.813519	2.457107e-51	1.608166e-48
MsG0180005048.01	MsG0480023679.01	0.842737	2.153714e-58	3.295796e-55
MsG0180005048.01	MsG0480023706.01	0.903103	4.898676e-79	7.146316e-75
MsG0180005048.01	MsG0480023842.01	0.808411	3.137710e-50	1.792834e-47
MsG0180005048.01	MsG0480024002.01	0.859541	3.851191e-63	1.020664e-59
MsG0180005048.01	MsG0580024060.01	0.824671	7.113154e-54	6.343897e-51
MsG0180005048.01	MsG0580024158.01	0.821229	4.511574e-53	3.649271e-50
MsG0180005048.01	MsG0580024276.01	0.854824	9.515228e-62	2.152550e-58
MsG0180005048.01	MsG0580024657.01	0.841760	3.909133e-58	5.801644e-55
MsG0180005048.01	MsG0580024742.01	0.849017	4.233853e-60	7.918642e-57
MsG0180005048.01	MsG0580024748.01	0.819128	1.366758e-52	1.042715e-49
MsG0180005048.01	MsG0580024787.01	0.893224	7.671625e-75	7.246504e-71
MsG0180005048.01	MsG0580024835.01	0.807328	5.332566e-50	2.961756e-47
MsG0180005048.01	MsG0580024954.01	0.868501	6.229357e-66	2.258511e-62
MsG0180005048.01	MsG0580025177.01	0.912605	1.607521e-83	3.645586e-79
MsG0180005048.01	MsG0580025186.01	0.869674	2.593371e-66	9.814431e-63
MsG0180005048.01	MsG0580025203.01	0.874368	7.131013e-68	3.201576e-64
MsG0180005048.01	MsG0580025504.01	0.910718	1.368115e-82	2.831991e-78
MsG0180005048.01	MsG0580025506.01	0.925817	1.096731e-90	4.994223e-86
MsG0180005048.01	MsG0580025526.01	0.808505	2.996672e-50	1.716449e-47
MsG0180005048.01	MsG0580025775.01	0.821263	4.430997e-53	3.587155e-50
MsG0180005048.01	MsG0580026343.01	0.805697	1.177702e-49	6.272762e-47
MsG0180005048.01	MsG0580028633.01	0.852471	4.517209e-61	9.448615e-58
MsG0180005048.01	MsG0580028756.01	0.862676	4.279972e-64	1.263789e-60
MsG0180005048.01	MsG0580028923.01	0.824406	8.214188e-54	7.268446e-51
MsG0180005048.01	MsG0580028927.01	0.887777	1.059295e-72	7.988221e-69
MsG0180005048.01	MsG0580028955.01	0.908744	1.223103e-81	2.303257e-77
MsG0180005048.01	MsG0580029123.01	0.817767	2.779729e-52	2.042753e-49
MsG0180005048.01	MsG0580029197.01	0.809163	2.167752e-50	1.263463e-47
MsG0180005048.01	MsG0580029261.01	0.834141	3.558512e-56	4.184960e-53
MsG0180005048.01	MsG0580029591.01	0.901553	2.385308e-78	3.239568e-74
MsG0180005048.01	MsG0680031407.01	0.818930	1.515930e-52	1.150429e-49
MsG0180005048.01	MsG0680031616.01	0.807863	4.105667e-50	2.312157e-47
MsG0180005048.01	MsG0680031701.01	0.831268	1.838315e-55	1.984727e-52
MsG0180005048.01	MsG0680032772.01	0.809912	1.496832e-50	8.899187e-48
MsG0180005048.01	MsG0680032773.01	0.800924	1.146972e-48	5.407072e-46
MsG0180005048.01	MsG0680033405.01	0.800792	1.220788e-48	5.735271e-46
MsG0180005048.01	MsG0680033696.01	0.809425	1.904047e-50	1.117577e-47
MsG0180005048.01	MsG0680034651.01	0.818423	1.975985e-52	1.478579e-49
MsG0180005048.01	MsG0680035350.01	0.827104	1.881398e-54	1.798590e-51
MsG0180005048.01	MsG0680035776.01	0.913886	3.654394e-84	8.832958e-80
MsG0180005048.01	MsG0680035792.01	0.863818	1.897485e-64	5.829258e-61
MsG0180005048.01	MsG0680035878.01	0.819010	1.453765e-52	1.105632e-49
MsG0180005048.01	MsG0780036534.01	0.892351	1.719537e-74	1.565960e-70
MsG0180005048.01	MsG0780037741.01	0.831114	2.005038e-55	2.154928e-52
MsG0180005048.01	MsG0780038402.01	0.836214	1.066743e-56	1.335550e-53
MsG0180005048.01	MsG0780038445.01	0.808524	2.969190e-50	1.701573e-47
MsG0180005048.01	MsG0780038736.01	0.882947	6.790815e-71	4.220181e-67
MsG0180005048.01	MsG0780039861.01	0.867333	1.478352e-65	5.142762e-62
MsG0180005048.01	MsG0780040364.01	0.853984	1.664558e-61	3.662674e-58
MsG0180005048.01	MsG0780040474.01	0.800042	1.734853e-48	7.997088e-46
MsG0180005048.01	MsG0780040533.01	0.804633	1.966822e-49	1.019190e-46
MsG0180005048.01	MsG0780040620.01	0.917851	3.206939e-86	9.469100e-82
MsG0180005048.01	MsG0780040641.01	0.897196	1.778005e-76	1.987073e-72
MsG0180005048.01	MsG0780040671.01	0.826992	2.000306e-54	1.906108e-51
MsG0180005048.01	MsG0780040844.01	0.820675	6.051699e-53	4.819639e-50
MsG0180005048.01	MsG0780040899.01	0.843572	1.290548e-58	2.027753e-55
MsG0180005048.01	MsG0780041008.01	0.843553	1.305325e-58	2.049773e-55
MsG0180005048.01	MsG0780041132.01	0.800897	1.161763e-48	5.473097e-46
MsG0180005048.01	MsG0780041142.01	0.850150	2.045543e-60	3.969164e-57
MsG0180005048.01	MsG0780041143.01	0.845725	3.394522e-59	5.710181e-56
MsG0180005048.01	MsG0780041273.01	0.901254	3.226122e-78	4.322441e-74
MsG0180005048.01	MsG0780041340.01	0.835390	1.725276e-56	2.106831e-53
MsG0180005048.01	MsG0780041359.01	0.901975	1.554913e-78	2.153555e-74
MsG0180005048.01	MsG0780041546.01	0.876109	1.813105e-68	8.684002e-65
MsG0180005048.01	MsG0780041660.01	0.841188	5.529819e-58	8.061699e-55
MsG0180005048.01	MsG0880041930.01	0.838880	2.210514e-57	3.000951e-54
MsG0180005048.01	MsG0880043637.01	0.801875	7.325263e-49	3.537369e-46
MsG0180005048.01	MsG0880043684.01	0.810820	9.532602e-51	5.805117e-48
MsG0180005048.01	MsG0880043714.01	0.823067	1.691181e-53	1.441062e-50
MsG0180005048.01	MsG0880043752.01	0.838109	3.496039e-57	4.635625e-54
MsG0180005048.01	MsG0880044103.01	0.817852	2.660160e-52	1.959409e-49
MsG0180005048.01	MsG0880044437.01	0.829516	4.927151e-55	5.054219e-52
MsG0180005048.01	MsG0880045015.01	0.908341	1.900243e-81	3.512336e-77
MsG0180005048.01	MsG0880045584.01	0.800961	1.127452e-48	5.320103e-46
MsG0180005048.01	MsG0880045612.01	0.882679	8.509753e-71	5.230709e-67
MsG0180005048.01	MsG0880045647.01	0.883341	4.870698e-71	3.075669e-67
MsG0180005048.01	MsG0880046431.01	0.843519	1.332742e-58	2.090551e-55
MsG0180005048.01	MsG0880046529.01	0.806034	1.000827e-49	5.376597e-47
MsG0180005048.01	MsG0880046646.01	0.827122	1.861949e-54	1.780981e-51
MsG0180005048.01	MsG0880046859.01	0.827495	1.515848e-54	1.465848e-51
MsG0180005048.01	MsG0880046904.01	0.876105	1.818965e-68	8.710415e-65
MsG0180005048.01	MsG0880046905.01	0.886043	4.819892e-72	3.387605e-68
MsG0180005048.01	MsG0880046906.01	0.830141	3.469873e-55	3.624655e-52
MsG0180005048.01	MsG0880046993.01	0.808919	2.444603e-50	1.415443e-47
MsG0180005048.01	MsG0880047345.01	0.805524	1.280353e-49	6.788583e-47
MsG0180005048.01	MsG0880047640.01	0.812070	5.101097e-51	3.211192e-48
MsG0180005048.01	MsG0880047649.01	0.883626	3.825780e-71	2.444790e-67

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005048.01.T01	MTR_1g492910	100.000	137	0	0	1	137	1	137	2.39e-95	271
MsG0180005048.01.T01	MTR_1g090780	99.270	137	1	0	1	137	1	137	1.30e-94	269
MsG0180005048.01.T01	MTR_4g063240	86.395	147	10	3	1	137	1	147	7.38e-81	234
MsG0180005048.01.T01	MTR_4g063220	87.162	148	8	3	1	137	1	148	3.71e-77	225
MsG0180005048.01.T01	MTR_4g063990	87.162	148	8	3	1	137	1	148	3.71e-77	225
MsG0180005048.01.T01	MTR_4g063200	87.162	148	8	3	1	137	1	148	3.71e-77	225
MsG0180005048.01.T01	MTR_4g064020	87.162	148	8	3	1	137	1	148	3.71e-77	225
MsG0180005048.01.T01	MTR_4g071180	87.162	148	8	3	1	137	1	148	3.25e-76	223
MsG0180005048.01.T01	MTR_4g070240	87.162	148	8	3	1	137	1	148	3.25e-76	223
MsG0180005048.01.T01	MTR_4g088025	89.510	143	9	3	1	137	1	143	6.62e-76	222
MsG0180005048.01.T01	MTR_4g070245	85.811	148	10	3	1	137	1	148	1.51e-74	219
MsG0180005048.01.T01	MTR_4g063275	84.459	148	12	3	1	137	1	148	6.70e-74	217
MsG0180005048.01.T01	MTR_4g064983	86.111	144	9	3	1	133	1	144	1.59e-72	217
MsG0180005048.01.T01	MTR_7g099960	95.413	109	4	1	29	137	31	138	2.62e-64	192
MsG0180005048.01.T01	MTR_1g068600	93.578	109	5	1	29	137	30	136	3.09e-63	189
MsG0180005048.01.T01	MTR_2g084480	61.798	89	34	0	48	136	136	224	1.92e-37	127
MsG0180005048.01.T01	MTR_8g069990	69.663	89	24	1	8	96	3	88	7.98e-37	121
MsG0180005048.01.T01	MTR_4g063270	90.196	51	5	0	75	125	1	51	5.42e-27	95.5
MsG0180005048.01.T01	MTR_7g114580	90.244	41	4	0	97	137	11	51	6.05e-20	77.8
MsG0180005048.01.T01	MTR_4g032777	36.364	99	58	1	28	121	12	110	4.00e-13	62.4
MsG0180005048.01.T01	MTR_2g083800	67.273	55	15	2	8	61	11	63	1.79e-11	56.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005048.01.T01	AT2G37470	88.406	138	14	2	1	136	1	138	5.10e-75	219
MsG0180005048.01.T01	AT3G45980	83.333	150	12	3	1	137	1	150	2.70e-74	218
MsG0180005048.01.T01	AT2G28720	82.119	151	13	2	1	137	1	151	4.33e-74	218
MsG0180005048.01.T01	AT3G53650	86.331	139	16	3	1	137	1	138	1.61e-71	211
MsG0180005048.01.T01	AT1G07790	83.333	150	10	4	1	137	1	148	1.96e-71	211
MsG0180005048.01.T01	AT5G59910	87.313	134	15	2	6	137	17	150	6.77e-70	207
MsG0180005048.01.T01	AT3G46030	89.147	129	12	2	11	137	17	145	2.34e-69	206
MsG0180005048.01.T01	AT5G22880	80.282	142	14	2	10	137	4	145	2.02e-66	198
MsG0180005048.01.T01	AT5G02570	84.173	139	13	2	1	137	1	132	3.08e-66	197
MsG0180005048.01.T01	AT3G09480	79.562	137	17	2	1	137	1	126	2.08e-62	187
MsG0180005048.01.T01	AT1G08170	56.989	93	40	0	42	134	143	235	7.05e-38	129

Find 32 sgRNAs with CRISPR-Local

Find 30 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTTCTCTTCTTCTTCTTAT+CGG	0.211855	1:-86177260	None:intergenic
GCTGTTCGTCTTGTTCTTCC+TGG	0.277831	1:+86177481	MsG0180005048.01.T01:CDS
CTTGAAGATGTAGATCTTGT+AGG	0.279657	1:-86177299	None:intergenic
CATTCAAGAGCTAGTGAATT+TGG	0.280274	1:-86177548	None:intergenic
TCGGTTGAGGATGCTTCCTT+TGG	0.316023	1:-86177241	None:intergenic
TCTGCAGGTGCTTTCTCTGC+AGG	0.340236	1:-86177193	None:intergenic
CGGTATCTCAAGCAAGGCTA+TGG	0.396652	1:+86177348	MsG0180005048.01.T01:CDS
CTTGTTGTAGCGAGCAAGTC+TGG	0.401541	1:-86177425	None:intergenic
GCGGGTTTCTTCTCTCCCTT+CGG	0.413410	1:-86177160	None:intergenic
CTTCTTCTTCTTATCGGTTG+AGG	0.416596	1:-86177254	None:intergenic
AGTGAATTTGGTGACAGCTT+TGG	0.420989	1:-86177536	None:intergenic
CTACAAGATCTACATCTTCA+AGG	0.431521	1:+86177300	MsG0180005048.01.T01:CDS
CGGTTGAGGATGCTTCCTTT+GGG	0.432726	1:-86177240	None:intergenic
TCCCTCGGAGACAGCGTGCT+TGG	0.447024	1:-86177512	None:intergenic
CATCTTCAAGGTTCTCAAGC+AGG	0.470454	1:+86177312	MsG0180005048.01.T01:CDS
TCTGCAGGCTTCTTCTCAGC+GGG	0.478601	1:-86177178	None:intergenic
GCGTGCTTGGCGAGTTCACC+AGG	0.485011	1:-86177499	None:intergenic
GGTGACAGCTTTGGTTCCCT+CGG	0.503972	1:-86177527	None:intergenic
CATCTTCGAGAAGCTCGCTC+AGG	0.521238	1:+86177396	MsG0180005048.01.T01:CDS
GGTATCTCAAGCAAGGCTAT+GGG	0.525343	1:+86177349	MsG0180005048.01.T01:CDS
CTCTGCAGGCTTCTTCTCAG+CGG	0.539158	1:-86177179	None:intergenic
TCGTTCAACAATGGCACCGA+AGG	0.539447	1:+86177144	None:intergenic
TTGCTTGAGATACCGATGTC+AGG	0.547522	1:-86177340	None:intergenic
CTGAATCTCACGAGAAGTGA+TGG	0.558881	1:-86177455	None:intergenic
GCCAAGCACGCTGTCTCCGA+GGG	0.566568	1:+86177511	MsG0180005048.01.T01:CDS
CGCCAAGCACGCTGTCTCCG+AGG	0.573257	1:+86177510	MsG0180005048.01.T01:CDS
CGTTCAACAATGGCACCGAA+GGG	0.602660	1:+86177145	None:intergenic
TGACATCGGTATCTCAAGCA+AGG	0.623015	1:+86177342	MsG0180005048.01.T01:CDS
AAGCAGGTTCATCCTGACAT+CGG	0.661631	1:+86177328	MsG0180005048.01.T01:CDS
AGCAGAGAAGAAGATCCCAA+AGG	0.665852	1:+86177225	MsG0180005048.01.T01:CDS
GTATCTCAAGCAAGGCTATG+GGG	0.674185	1:+86177350	MsG0180005048.01.T01:CDS
ATCTCACGAGAAGTGATGGT+AGG	0.676602	1:-86177451	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	GTTTCTCTTCTTCTTCTTAT+CGG	-	Chr1:86177263-86177282	None:intergenic	30.0%
	CTACAAGATCTACATCTTCA+AGG	+	Chr1:86177300-86177319	MsG0180005048.01.T01:CDS	35.0%
	CTTGAAGATGTAGATCTTGT+AGG	-	Chr1:86177302-86177321	None:intergenic	35.0%
!	AGTGAATTTGGTGACAGCTT+TGG	-	Chr1:86177539-86177558	None:intergenic	40.0%
!	CTTCTTCTTCTTATCGGTTG+AGG	-	Chr1:86177257-86177276	None:intergenic	40.0%
	AAGCAGGTTCATCCTGACAT+CGG	+	Chr1:86177328-86177347	MsG0180005048.01.T01:CDS	45.0%
	AGCAGAGAAGAAGATCCCAA+AGG	+	Chr1:86177225-86177244	MsG0180005048.01.T01:CDS	45.0%
	ATCTCACGAGAAGTGATGGT+AGG	-	Chr1:86177454-86177473	None:intergenic	45.0%
	CATCTTCAAGGTTCTCAAGC+AGG	+	Chr1:86177312-86177331	MsG0180005048.01.T01:CDS	45.0%
	CTGAATCTCACGAGAAGTGA+TGG	-	Chr1:86177458-86177477	None:intergenic	45.0%
	GGTATCTCAAGCAAGGCTAT+GGG	+	Chr1:86177349-86177368	MsG0180005048.01.T01:CDS	45.0%
	GTATCTCAAGCAAGGCTATG+GGG	+	Chr1:86177350-86177369	MsG0180005048.01.T01:CDS	45.0%
	TGACATCGGTATCTCAAGCA+AGG	+	Chr1:86177342-86177361	MsG0180005048.01.T01:CDS	45.0%
	TTGCTTGAGATACCGATGTC+AGG	-	Chr1:86177343-86177362	None:intergenic	45.0%
!	TCTGCTTTCGTTTTCTCTGC+AGG	-	Chr1:86177211-86177230	None:intergenic	45.0%
	CGGTATCTCAAGCAAGGCTA+TGG	+	Chr1:86177348-86177367	MsG0180005048.01.T01:CDS	50.0%
	CGGTTGAGGATGCTTCCTTT+GGG	-	Chr1:86177243-86177262	None:intergenic	50.0%
	TCGGTTGAGGATGCTTCCTT+TGG	-	Chr1:86177244-86177263	None:intergenic	50.0%
!	CTTGTTGTAGCGAGCAAGTC+TGG	-	Chr1:86177428-86177447	None:intergenic	50.0%
!	GCTGTTCGTCTTGTTCTTCC+TGG	+	Chr1:86177481-86177500	MsG0180005048.01.T01:CDS	50.0%
	CATCTTCGAGAAGCTCGCTC+AGG	+	Chr1:86177396-86177415	MsG0180005048.01.T01:CDS	55.0%
	CTCTGCAGGCTTCTTCTCAG+CGG	-	Chr1:86177182-86177201	None:intergenic	55.0%
	GCGGGTTTCTTCTCTCCCTT+CGG	-	Chr1:86177163-86177182	None:intergenic	55.0%
	TCTGCAGGCTTCTTCTCAGC+GGG	-	Chr1:86177181-86177200	None:intergenic	55.0%
	TCTGCAGGTGCTTTCTCTGC+AGG	-	Chr1:86177196-86177215	None:intergenic	55.0%
!	GGTGACAGCTTTGGTTCCCT+CGG	-	Chr1:86177530-86177549	None:intergenic	55.0%
	GCCAAGCACGCTGTCTCCGA+GGG	+	Chr1:86177511-86177530	MsG0180005048.01.T01:CDS	65.0%
	GCGTGCTTGGCGAGTTCACC+AGG	-	Chr1:86177502-86177521	None:intergenic	65.0%
	TCCCTCGGAGACAGCGTGCT+TGG	-	Chr1:86177515-86177534	None:intergenic	65.0%
	CGCCAAGCACGCTGTCTCCG+AGG	+	Chr1:86177510-86177529	MsG0180005048.01.T01:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	86177154	86177567	86177154	ID=MsG0180005048.01;Name=MsG0180005048.01
Chr1	mRNA	86177154	86177567	86177154	ID=MsG0180005048.01.T01;Parent=MsG0180005048.01;Name=MsG0180005048.01.T01;_AED=0.45;_eAED=0.45;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|137
Chr1	exon	86177154	86177567	86177154	ID=MsG0180005048.01.T01:exon:9890;Parent=MsG0180005048.01.T01
Chr1	CDS	86177154	86177567	86177154	ID=MsG0180005048.01.T01:cds;Parent=MsG0180005048.01.T01

Gene Sequence

>MsG0180005048.01.T01

ATGGCACCGAAGGGAGAGAAGAAACCCGCTGAGAAGAAGCCTGCAGAGAAAGCACCTGCAGAGAAAACGAAAGCAGAGAAGAAGATCCCAAAGGAAGCATCCTCAACCGATAAGAAGAAGAAGAGAAACAAGAAGAGCGTTGAAACCTACAAGATCTACATCTTCAAGGTTCTCAAGCAGGTTCATCCTGACATCGGTATCTCAAGCAAGGCTATGGGGATCATGAACAGCTTCATCAACGACATCTTCGAGAAGCTCGCTCAGGAATCTTCCAGACTTGCTCGCTACAACAAGAAACCTACCATCACTTCTCGTGAGATTCAGACTGCTGTTCGTCTTGTTCTTCCTGGTGAACTCGCCAAGCACGCTGTCTCCGAGGGAACCAAAGCTGTCACCAAATTCACTAGCTCTTGA

Protein sequence

>MsG0180005048.01.T01

MAPKGEKKPAEKKPAEKAPAEKTKAEKKIPKEASSTDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*