Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002218.01.T01 | XP_013467371.1 | 99.679 | 312 | 1 | 0 | 1 | 312 | 19 | 330 | 0 | 640 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002218.01.T01 | P49730 | 85.897 | 312 | 43 | 1 | 1 | 312 | 19 | 329 | 0 | 557 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002218.01.T01 | A0A072VJ25 | 99.679 | 312 | 1 | 0 | 1 | 312 | 19 | 330 | 0.0 | 640 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0180002218.01 | 0.848838 | 4.748334e-60 | 8.828077e-57 |
| MsG0080048258.01 | MsG0180002218.01 | 0.849705 | 2.724467e-60 | 5.209610e-57 |
| MsG0080048775.01 | MsG0180002218.01 | 0.855744 | 5.137761e-62 | 1.198295e-58 |
| MsG0080048781.01 | MsG0180002218.01 | 0.843541 | 1.315335e-58 | 2.064633e-55 |
| MsG0180000718.01 | MsG0180002218.01 | 0.837813 | 4.164217e-57 | 5.472421e-54 |
| MsG0180001293.01 | MsG0180002218.01 | 0.858044 | 1.079497e-62 | 2.718841e-59 |
| MsG0180001719.01 | MsG0180002218.01 | 0.831421 | 1.685553e-55 | 1.828131e-52 |
| MsG0180002134.01 | MsG0180002218.01 | 0.821037 | 4.995566e-53 | 4.019514e-50 |
| MsG0180002217.01 | MsG0180002218.01 | 0.866345 | 3.051889e-65 | 1.025286e-61 |
| MsG0180002218.01 | MsG0180002397.01 | 0.873021 | 2.029421e-67 | 8.673754e-64 |
| MsG0180002218.01 | MsG0180002428.01 | 0.825061 | 5.754854e-54 | 5.189605e-51 |
| MsG0180002218.01 | MsG0180002583.01 | 0.853876 | 1.788291e-61 | 3.921024e-58 |
| MsG0180002218.01 | MsG0180003485.01 | 0.827050 | 1.937328e-54 | 1.849209e-51 |
| MsG0180002218.01 | MsG0180003658.01 | 0.820165 | 7.924244e-53 | 6.223027e-50 |
| MsG0180002218.01 | MsG0180003698.01 | 0.828967 | 6.696941e-55 | 6.759317e-52 |
| MsG0180002218.01 | MsG0180003796.01 | 0.834852 | 2.358782e-56 | 2.833995e-53 |
| MsG0180002218.01 | MsG0180003857.01 | 0.856743 | 2.616377e-62 | 6.306746e-59 |
| MsG0180002218.01 | MsG0180004120.01 | 0.878437 | 2.809430e-69 | 1.467166e-65 |
| MsG0180002218.01 | MsG0180004126.01 | 0.819526 | 1.108943e-52 | 8.554907e-50 |
| MsG0180002218.01 | MsG0180004185.01 | 0.837270 | 5.737444e-57 | 7.413725e-54 |
| MsG0180002218.01 | MsG0180004299.01 | 0.859352 | 4.390423e-63 | 1.156231e-59 |
| MsG0180002218.01 | MsG0180004475.01 | 0.817380 | 3.398771e-52 | 2.471275e-49 |
| MsG0180002218.01 | MsG0180004538.01 | 0.892158 | 2.054490e-74 | 1.855471e-70 |
| MsG0180002218.01 | MsG0180004583.01 | 0.889965 | 1.508694e-73 | 1.244255e-69 |
| MsG0180002218.01 | MsG0180004835.01 | 0.814474 | 1.512683e-51 | 1.016033e-48 |
| MsG0180002218.01 | MsG0180004995.01 | 0.873775 | 1.131679e-67 | 4.971030e-64 |
| MsG0180002218.01 | MsG0180005002.01 | 0.808394 | 3.164165e-50 | 1.807180e-47 |
| MsG0180002218.01 | MsG0180005048.01 | 0.895375 | 1.017859e-75 | 1.053193e-71 |
| MsG0180002218.01 | MsG0180005655.01 | 0.843734 | 1.167482e-58 | 1.843784e-55 |
| MsG0180002218.01 | MsG0180006062.01 | 0.808258 | 3.383249e-50 | 1.925444e-47 |
| MsG0180002218.01 | MsG0180006133.01 | 0.884030 | 2.714217e-71 | 1.762368e-67 |
| MsG0180002218.01 | MsG0280006398.01 | 0.818806 | 1.616965e-52 | 1.222684e-49 |
| MsG0180002218.01 | MsG0280006540.01 | 0.828207 | 1.021788e-54 | 1.008863e-51 |
| MsG0180002218.01 | MsG0280006563.01 | 0.860268 | 2.324734e-63 | 6.317327e-60 |
| MsG0180002218.01 | MsG0280007003.01 | 0.812926 | 3.315387e-51 | 2.135143e-48 |
| MsG0180002218.01 | MsG0280007431.01 | 0.822402 | 2.415425e-53 | 2.019759e-50 |
| MsG0180002218.01 | MsG0280007688.01 | 0.802821 | 4.678063e-49 | 2.314118e-46 |
| MsG0180002218.01 | MsG0280007919.01 | 0.830873 | 2.297647e-55 | 2.451963e-52 |
| MsG0180002218.01 | MsG0280009216.01 | 0.832636 | 8.441892e-56 | 9.491742e-53 |
| MsG0180002218.01 | MsG0280009866.01 | 0.802502 | 5.443183e-49 | 2.670601e-46 |
| MsG0180002218.01 | MsG0280010579.01 | 0.823212 | 1.564508e-53 | 1.338487e-50 |
| MsG0180002218.01 | MsG0280011083.01 | 0.823746 | 1.173113e-53 | 1.019063e-50 |
| MsG0180002218.01 | MsG0380012118.01 | 0.808830 | 2.554439e-50 | 1.475579e-47 |
| MsG0180002218.01 | MsG0380012788.01 | 0.839447 | 1.575761e-57 | 2.176810e-54 |
| MsG0180002218.01 | MsG0380012808.01 | 0.819502 | 1.122755e-52 | 8.655740e-50 |
| MsG0180002218.01 | MsG0380012956.01 | 0.861507 | 9.770824e-64 | 2.771405e-60 |
| MsG0180002218.01 | MsG0380013584.01 | 0.837487 | 5.049233e-57 | 6.568967e-54 |
| MsG0180002218.01 | MsG0380014542.01 | 0.837217 | 5.922430e-57 | 7.640313e-54 |
| MsG0180002218.01 | MsG0380014666.01 | 0.897085 | 1.979039e-76 | 2.201144e-72 |
| MsG0180002218.01 | MsG0380014751.01 | 0.837963 | 3.811893e-57 | 5.032430e-54 |
| MsG0180002218.01 | MsG0380015090.01 | 0.848121 | 7.498327e-60 | 1.361843e-56 |
| MsG0180002218.01 | MsG0380015219.01 | 0.849496 | 3.116133e-60 | 5.918220e-57 |
| MsG0180002218.01 | MsG0380015340.01 | 0.871686 | 5.655749e-67 | 2.302094e-63 |
| MsG0180002218.01 | MsG0380015394.01 | 0.883223 | 5.379406e-71 | 3.380728e-67 |
| MsG0180002218.01 | MsG0380015552.01 | 0.806821 | 6.826864e-50 | 3.742108e-47 |
| MsG0180002218.01 | MsG0380015954.01 | 0.855368 | 6.610207e-62 | 1.522778e-58 |
| MsG0180002218.01 | MsG0380016027.01 | 0.857079 | 2.083456e-62 | 5.080475e-59 |
| MsG0180002218.01 | MsG0380016091.01 | 0.848409 | 6.241675e-60 | 1.144449e-56 |
| MsG0180002218.01 | MsG0380016092.01 | 0.849207 | 3.749589e-60 | 7.056669e-57 |
| MsG0180002218.01 | MsG0380016165.01 | 0.855329 | 6.785568e-62 | 1.561109e-58 |
| MsG0180002218.01 | MsG0380016217.01 | 0.848200 | 7.133785e-60 | 1.298942e-56 |
| MsG0180002218.01 | MsG0380016225.01 | 0.857452 | 1.616345e-62 | 3.991455e-59 |
| MsG0180002218.01 | MsG0380017128.01 | 0.808278 | 3.350197e-50 | 1.907641e-47 |
| MsG0180002218.01 | MsG0380017181.01 | 0.841295 | 5.181466e-58 | 7.578829e-55 |
| MsG0180002218.01 | MsG0380017282.01 | 0.822343 | 2.491605e-53 | 2.079925e-50 |
| MsG0180002218.01 | MsG0380017332.01 | 0.864158 | 1.487006e-64 | 4.622667e-61 |
| MsG0180002218.01 | MsG0380017361.01 | 0.830713 | 2.515025e-55 | 2.671395e-52 |
| MsG0180002218.01 | MsG0380017605.01 | 0.876286 | 1.575796e-68 | 7.595988e-65 |
| MsG0180002218.01 | MsG0380017632.01 | 0.878545 | 2.575620e-69 | 1.350385e-65 |
| MsG0180002218.01 | MsG0380017696.01 | 0.830776 | 2.426969e-55 | 2.582601e-52 |
| MsG0180002218.01 | MsG0380017932.01 | 0.822552 | 2.228716e-53 | 1.871658e-50 |
| MsG0180002218.01 | MsG0380018055.01 | 0.808046 | 3.754442e-50 | 2.124591e-47 |
| MsG0180002218.01 | MsG0480018106.01 | 0.818332 | 2.072013e-52 | 1.546467e-49 |
| MsG0180002218.01 | MsG0480018228.01 | 0.866754 | 2.262820e-65 | 7.713116e-62 |
| MsG0180002218.01 | MsG0480018526.01 | 0.858836 | 6.265676e-63 | 1.620894e-59 |
| MsG0180002218.01 | MsG0480018785.01 | 0.867918 | 9.598307e-66 | 3.408141e-62 |
| MsG0180002218.01 | MsG0480020398.01 | 0.866612 | 2.510900e-65 | 8.515055e-62 |
| MsG0180002218.01 | MsG0480020856.01 | 0.863513 | 2.359133e-64 | 7.170689e-61 |
| MsG0180002218.01 | MsG0480020921.01 | 0.845312 | 4.394147e-59 | 7.293227e-56 |
| MsG0180002218.01 | MsG0480020926.01 | 0.847015 | 1.510778e-59 | 2.648825e-56 |
| MsG0180002218.01 | MsG0480020970.01 | 0.813682 | 2.261722e-51 | 1.486825e-48 |
| MsG0180002218.01 | MsG0480020971.01 | 0.812564 | 3.979882e-51 | 2.538877e-48 |
| MsG0180002218.01 | MsG0480021015.01 | 0.806730 | 7.139247e-50 | 3.904006e-47 |
| MsG0180002218.01 | MsG0480021016.01 | 0.820002 | 8.631362e-53 | 6.747782e-50 |
| MsG0180002218.01 | MsG0480021100.01 | 0.842348 | 2.731531e-58 | 4.130188e-55 |
| MsG0180002218.01 | MsG0480021301.01 | 0.863169 | 3.015725e-64 | 9.056653e-61 |
| MsG0180002218.01 | MsG0480021456.01 | 0.828308 | 9.660772e-55 | 9.565925e-52 |
| MsG0180002218.01 | MsG0480021704.01 | 0.809561 | 1.780446e-50 | 1.048797e-47 |
| MsG0180002218.01 | MsG0480021773.01 | 0.861604 | 9.131418e-64 | 2.598347e-60 |
| MsG0180002218.01 | MsG0480021902.01 | 0.886182 | 4.272608e-72 | 3.020158e-68 |
| MsG0180002218.01 | MsG0480022307.01 | 0.876620 | 1.208452e-68 | 5.898091e-65 |
| MsG0180002218.01 | MsG0480022378.01 | 0.837505 | 4.997235e-57 | 6.505104e-54 |
| MsG0180002218.01 | MsG0480022442.01 | 0.805840 | 1.099105e-49 | 5.875408e-47 |
| MsG0180002218.01 | MsG0480022559.01 | 0.816287 | 5.978725e-52 | 4.219203e-49 |
| MsG0180002218.01 | MsG0480022784.01 | 0.865273 | 6.653595e-65 | 2.151963e-61 |
| MsG0180002218.01 | MsG0480022982.01 | 0.804172 | 2.454608e-49 | 1.256957e-46 |
| MsG0180002218.01 | MsG0480022991.01 | 0.858116 | 1.026979e-62 | 2.592905e-59 |
| MsG0180002218.01 | MsG0480023003.01 | 0.877229 | 7.429484e-69 | 3.707992e-65 |
| MsG0180002218.01 | MsG0480023194.01 | 0.831105 | 2.015707e-55 | 2.165833e-52 |
| MsG0180002218.01 | MsG0480023296.01 | 0.810129 | 1.344168e-50 | 8.036882e-48 |
| MsG0180002218.01 | MsG0480023424.01 | 0.867859 | 1.002641e-65 | 3.552654e-62 |
| MsG0180002218.01 | MsG0480023426.01 | 0.866055 | 3.770520e-65 | 1.253719e-61 |
| MsG0180002218.01 | MsG0480023428.01 | 0.811706 | 6.123172e-51 | 3.817062e-48 |
| MsG0180002218.01 | MsG0480023484.01 | 0.803978 | 2.692821e-49 | 1.372194e-46 |
| MsG0180002218.01 | MsG0480023532.01 | 0.814656 | 1.378469e-51 | 9.303963e-49 |
| MsG0180002218.01 | MsG0480023653.01 | 0.835446 | 1.670276e-56 | 2.042967e-53 |
| MsG0180002218.01 | MsG0480023672.01 | 0.804614 | 1.985179e-49 | 1.028206e-46 |
| MsG0180002218.01 | MsG0480023679.01 | 0.840384 | 8.980802e-58 | 1.277178e-54 |
| MsG0180002218.01 | MsG0480023706.01 | 0.878586 | 2.490631e-69 | 1.307752e-65 |
| MsG0180002218.01 | MsG0480023842.01 | 0.806724 | 7.156767e-50 | 3.913099e-47 |
| MsG0180002218.01 | MsG0480024002.01 | 0.846010 | 2.840624e-59 | 4.822434e-56 |
| MsG0180002218.01 | MsG0580024060.01 | 0.838861 | 2.235337e-57 | 3.032894e-54 |
| MsG0180002218.01 | MsG0580024276.01 | 0.834057 | 3.735799e-56 | 4.382797e-53 |
| MsG0180002218.01 | MsG0580024657.01 | 0.811880 | 5.610262e-51 | 3.513569e-48 |
| MsG0180002218.01 | MsG0580024742.01 | 0.851328 | 9.535192e-61 | 1.923333e-57 |
| MsG0180002218.01 | MsG0580024748.01 | 0.807816 | 4.201977e-50 | 2.363542e-47 |
| MsG0180002218.01 | MsG0580024787.01 | 0.886212 | 4.163903e-72 | 2.947087e-68 |
| MsG0180002218.01 | MsG0580024813.01 | 0.815345 | 9.695861e-52 | 6.667860e-49 |
| MsG0180002218.01 | MsG0580024954.01 | 0.850538 | 1.591379e-60 | 3.127288e-57 |
| MsG0180002218.01 | MsG0580025177.01 | 0.873472 | 1.432140e-67 | 6.223605e-64 |
| MsG0180002218.01 | MsG0580025186.01 | 0.875516 | 2.897391e-68 | 1.356514e-64 |
| MsG0180002218.01 | MsG0580025203.01 | 0.803366 | 3.607963e-49 | 1.809642e-46 |
| MsG0180002218.01 | MsG0580025504.01 | 0.885987 | 5.060959e-72 | 3.548525e-68 |
| MsG0180002218.01 | MsG0580025506.01 | 0.845227 | 4.631188e-59 | 7.665640e-56 |
| MsG0180002218.01 | MsG0580025526.01 | 0.806183 | 9.308603e-50 | 5.019922e-47 |
| MsG0180002218.01 | MsG0580025775.01 | 0.841315 | 5.119827e-58 | 7.493346e-55 |
| MsG0180002218.01 | MsG0580026141.01 | 0.807520 | 4.856195e-50 | 2.710639e-47 |
| MsG0180002218.01 | MsG0580028756.01 | 0.825969 | 3.507082e-54 | 3.245538e-51 |
| MsG0180002218.01 | MsG0580028923.01 | 0.829562 | 4.802338e-55 | 4.932662e-52 |
| MsG0180002218.01 | MsG0580028927.01 | 0.865500 | 5.647366e-65 | 1.841421e-61 |
| MsG0180002218.01 | MsG0580028955.01 | 0.856666 | 2.757341e-62 | 6.630152e-59 |
| MsG0180002218.01 | MsG0580029102.01 | 0.818900 | 1.539607e-52 | 1.167328e-49 |
| MsG0180002218.01 | MsG0580029123.01 | 0.827453 | 1.551938e-54 | 1.498968e-51 |
| MsG0180002218.01 | MsG0580029261.01 | 0.821104 | 4.821744e-53 | 3.886632e-50 |
| MsG0180002218.01 | MsG0580029591.01 | 0.866822 | 2.152459e-65 | 7.354711e-62 |
| MsG0180002218.01 | MsG0680031407.01 | 0.821794 | 3.340682e-53 | 2.745297e-50 |
| MsG0180002218.01 | MsG0680031616.01 | 0.804609 | 1.989614e-49 | 1.030382e-46 |
| MsG0180002218.01 | MsG0680031701.01 | 0.804041 | 2.613562e-49 | 1.333907e-46 |
| MsG0180002218.01 | MsG0680033696.01 | 0.821116 | 4.790623e-53 | 3.862819e-50 |
| MsG0180002218.01 | MsG0680035350.01 | 0.844736 | 6.282969e-59 | 1.023982e-55 |
| MsG0180002218.01 | MsG0680035776.01 | 0.868046 | 8.730015e-66 | 3.113654e-62 |
| MsG0180002218.01 | MsG0780036534.01 | 0.869690 | 2.563547e-66 | 9.707239e-63 |
| MsG0180002218.01 | MsG0780037158.01 | 0.800364 | 1.492364e-48 | 6.935930e-46 |
| MsG0180002218.01 | MsG0780037741.01 | 0.836253 | 1.043133e-56 | 1.307493e-53 |
| MsG0180002218.01 | MsG0780038402.01 | 0.864944 | 8.441988e-65 | 2.698287e-61 |
| MsG0180002218.01 | MsG0780038736.01 | 0.904172 | 1.619263e-79 | 2.474779e-75 |
| MsG0180002218.01 | MsG0780039861.01 | 0.867624 | 1.193307e-65 | 4.193878e-62 |
| MsG0180002218.01 | MsG0780040364.01 | 0.833769 | 4.407657e-56 | 5.126846e-53 |
| MsG0180002218.01 | MsG0780040620.01 | 0.865192 | 7.059098e-65 | 2.276767e-61 |
| MsG0180002218.01 | MsG0780040641.01 | 0.878422 | 2.845932e-69 | 1.485281e-65 |
| MsG0180002218.01 | MsG0780040899.01 | 0.838294 | 3.131436e-57 | 4.175393e-54 |
| MsG0180002218.01 | MsG0780041008.01 | 0.857116 | 2.032537e-62 | 4.962360e-59 |
| MsG0180002218.01 | MsG0780041142.01 | 0.843109 | 1.715289e-58 | 2.655788e-55 |
| MsG0180002218.01 | MsG0780041143.01 | 0.829112 | 6.175132e-55 | 6.259813e-52 |
| MsG0180002218.01 | MsG0780041273.01 | 0.870583 | 1.307980e-66 | 5.114169e-63 |
| MsG0180002218.01 | MsG0780041340.01 | 0.861987 | 6.969815e-64 | 2.009036e-60 |
| MsG0180002218.01 | MsG0780041359.01 | 0.873068 | 1.957104e-67 | 8.380794e-64 |
| MsG0180002218.01 | MsG0780041546.01 | 0.807557 | 4.768641e-50 | 2.664193e-47 |
| MsG0180002218.01 | MsG0880041930.01 | 0.808358 | 3.220907e-50 | 1.837878e-47 |
| MsG0180002218.01 | MsG0880043684.01 | 0.805394 | 1.363409e-49 | 7.204933e-47 |
| MsG0180002218.01 | MsG0880043714.01 | 0.817376 | 3.405341e-52 | 2.475816e-49 |
| MsG0180002218.01 | MsG0880043752.01 | 0.838400 | 2.941604e-57 | 3.935381e-54 |
| MsG0180002218.01 | MsG0880044103.01 | 0.848673 | 5.276368e-60 | 9.757281e-57 |
| MsG0180002218.01 | MsG0880044437.01 | 0.850600 | 1.529168e-60 | 3.011153e-57 |
| MsG0180002218.01 | MsG0880045015.01 | 0.827347 | 1.644960e-54 | 1.584060e-51 |
| MsG0180002218.01 | MsG0880045439.01 | 0.801634 | 8.208476e-49 | 3.939452e-46 |
| MsG0180002218.01 | MsG0880045584.01 | 0.802477 | 5.507445e-49 | 2.700476e-46 |
| MsG0180002218.01 | MsG0880045612.01 | 0.882732 | 8.135230e-71 | 5.013010e-67 |
| MsG0180002218.01 | MsG0880045647.01 | 0.875699 | 2.506940e-68 | 1.182170e-64 |
| MsG0180002218.01 | MsG0880045989.01 | 0.812261 | 4.633189e-51 | 2.932017e-48 |
| MsG0180002218.01 | MsG0880046431.01 | 0.844767 | 6.167039e-59 | 1.006007e-55 |
| MsG0180002218.01 | MsG0880046646.01 | 0.832237 | 1.059944e-55 | 1.177604e-52 |
| MsG0180002218.01 | MsG0880046859.01 | 0.806863 | 6.689291e-50 | 3.670727e-47 |
| MsG0180002218.01 | MsG0880046885.01 | 0.803841 | 2.875532e-49 | 1.460122e-46 |
| MsG0180002218.01 | MsG0880046904.01 | 0.851955 | 6.334433e-61 | 1.303212e-57 |
| MsG0180002218.01 | MsG0880046905.01 | 0.852379 | 4.797357e-61 | 1.000545e-57 |
| MsG0180002218.01 | MsG0880046906.01 | 0.826398 | 2.773715e-54 | 2.598266e-51 |
| MsG0180002218.01 | MsG0880046993.01 | 0.822813 | 1.937803e-53 | 1.639342e-50 |
| MsG0180002218.01 | MsG0880047222.01 | 0.803958 | 2.718927e-49 | 1.384766e-46 |
| MsG0180002218.01 | MsG0880047311.01 | 0.809350 | 1.976491e-50 | 1.157805e-47 |
| MsG0180002218.01 | MsG0880047345.01 | 0.817203 | 3.723700e-52 | 2.694398e-49 |
| MsG0180002218.01 | MsG0880047357.01 | 0.807514 | 4.869248e-50 | 2.717562e-47 |
| MsG0180002218.01 | MsG0880047640.01 | 0.822523 | 2.263512e-53 | 1.899241e-50 |
| MsG0180002218.01 | MsG0880047649.01 | 0.884990 | 1.195324e-71 | 8.061568e-68 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002218.01.T01 | MTR_1g050472 | 99.679 | 312 | 1 | 0 | 1 | 312 | 19 | 330 | 0.0 | 640 |
| MsG0180002218.01.T01 | MTR_0268s0080 | 97.115 | 312 | 9 | 0 | 1 | 312 | 19 | 330 | 0.0 | 630 |
| MsG0180002218.01.T01 | MTR_7g029110 | 96.154 | 312 | 12 | 0 | 1 | 312 | 19 | 330 | 0.0 | 604 |
| MsG0180002218.01.T01 | MTR_8g469010 | 92.628 | 312 | 18 | 1 | 1 | 312 | 19 | 325 | 0.0 | 597 |
| MsG0180002218.01.T01 | MTR_4g117370 | 77.564 | 312 | 69 | 1 | 1 | 312 | 31 | 341 | 0.0 | 518 |
| MsG0180002218.01.T01 | MTR_6g005270 | 67.442 | 43 | 14 | 0 | 247 | 289 | 25 | 67 | 1.01e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002218.01.T01 | AT3G27060 | 84.076 | 314 | 48 | 2 | 1 | 312 | 19 | 332 | 0.0 | 526 |
| MsG0180002218.01.T01 | AT3G23580 | 77.244 | 312 | 70 | 1 | 1 | 312 | 31 | 341 | 0.0 | 506 |
Find 47 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCGCGTTGGTTGGGATGAA+TGG | 0.235467 | 1:+35029314 | MsG0180002218.01.T01:CDS |
| CGCTTCCTTGCGCGTTGGTT+GGG | 0.274299 | 1:+35029306 | MsG0180002218.01.T01:CDS |
| GTTTGTTGCTGATAGGTTAT+TGG | 0.303774 | 1:+35029361 | MsG0180002218.01.T01:CDS |
| TGCAATCTGGAAACCATAAA+AGG | 0.328563 | 1:-35028868 | None:intergenic |
| GCGCGTTGGTTGGGATGAAT+GGG | 0.334497 | 1:+35029315 | MsG0180002218.01.T01:CDS |
| AAGCTGATTGGGCGATGAAA+TGG | 0.358474 | 1:+35029006 | MsG0180002218.01.T01:CDS |
| GCGCTTCCTTGCGCGTTGGT+TGG | 0.370769 | 1:+35029305 | MsG0180002218.01.T01:CDS |
| ACCATAAAAGGCACGTGCTT+CGG | 0.379129 | 1:-35028856 | None:intergenic |
| TTTGTTGCTGATAGGTTATT+GGG | 0.379609 | 1:+35029362 | MsG0180002218.01.T01:CDS |
| ATGTTCAGAATCCGTTTGAT+TGG | 0.390491 | 1:+35029411 | MsG0180002218.01.T01:CDS |
| AATCACTTATATACGTTTCA+AGG | 0.405711 | 1:-35028926 | None:intergenic |
| GTTGCATTTGCTTGTGTTGA+AGG | 0.436600 | 1:+35029062 | MsG0180002218.01.T01:CDS |
| AGGCACGTGCTTCGGAGACT+TGG | 0.437951 | 1:-35028848 | None:intergenic |
| GAGCTTATTTCACGCGATGA+AGG | 0.439919 | 1:+35029164 | MsG0180002218.01.T01:CDS |
| TCTGTTATGAATAGCTTGAA+TGG | 0.443380 | 1:+35029503 | MsG0180002218.01.T01:CDS |
| TCAGAATCCGTTTGATTGGA+TGG | 0.443597 | 1:+35029415 | MsG0180002218.01.T01:CDS |
| GCCGTCGGAGGCGGCGAAGA+AGG | 0.452615 | 1:-35028784 | MsG0180002217.01.T01:CDS |
| TGCGGTCCAGAATGAGGCTT+CGG | 0.467026 | 1:-35028679 | MsG0180002217.01.T01:CDS |
| GAAAATCGCACAGAAACTTC+CGG | 0.473049 | 1:-35029096 | MsG0180002219.01.T01:CDS |
| GAGGACGATGCCGTCGGAGG+CGG | 0.474359 | 1:-35028793 | None:intergenic |
| ATGGAATTGATTTCGCTTCA+AGG | 0.479094 | 1:+35029434 | MsG0180002218.01.T01:CDS |
| ATCAATTCCATCCAATCAAA+CGG | 0.480364 | 1:-35029422 | None:intergenic |
| GATAGGTTATTGGGTGAGCT+TGG | 0.486660 | 1:+35029371 | MsG0180002218.01.T01:CDS |
| TGAAATAAGCTCGTTTGAGA+AGG | 0.487505 | 1:-35029153 | MsG0180002219.01.T01:CDS |
| ATATTGAGTTTGTTGCTGAT+AGG | 0.493329 | 1:+35029354 | MsG0180002218.01.T01:CDS |
| CGCGTTGGTTGGGATGAATG+GGG | 0.498034 | 1:+35029316 | MsG0180002218.01.T01:CDS |
| GTGATGCTGTTGAAATTGAA+AGG | 0.499878 | 1:+35029267 | MsG0180002218.01.T01:CDS |
| GGGTGAGCTTGGTTGTGAAA+AGG | 0.505349 | 1:+35029382 | MsG0180002218.01.T01:CDS |
| GCCTTCTTCGCCGCCTCCGA+CGG | 0.505987 | 1:+35028783 | MsG0180002218.01.T01:CDS |
| TTCTTCTGCGGTCCAGAATG+AGG | 0.510696 | 1:-35028685 | MsG0180002217.01.T01:CDS |
| TGGAATTGATTTCGCTTCAA+GGG | 0.520571 | 1:+35029435 | MsG0180002218.01.T01:CDS |
| CGAGGACATGTGAGATGAAG+TGG | 0.543318 | 1:-35028761 | MsG0180002217.01.T01:CDS |
| TGATGCTGTTGAAATTGAAA+GGG | 0.545948 | 1:+35029268 | MsG0180002218.01.T01:CDS |
| ATGAATAGCTTGAATGGTAA+TGG | 0.546534 | 1:+35029509 | MsG0180002218.01.T01:CDS |
| TTTCCTCCGATCTCAAGCAC+TGG | 0.566756 | 1:+35028715 | MsG0180002218.01.T01:CDS |
| TTCGAGGACGATGCCGTCGG+AGG | 0.583990 | 1:-35028796 | None:intergenic |
| TTCATCCCAACCAACGCGCA+AGG | 0.586445 | 1:-35029311 | None:intergenic |
| TCGTTTGAGAAGGTTAATCC+CGG | 0.587906 | 1:-35029143 | MsG0180002219.01.T01:CDS |
| ATCGTCCTCGAAAATCTCGC+TGG | 0.589537 | 1:+35028807 | MsG0180002218.01.T01:CDS |
| CGGAGGCGGCGAAGAAGGCG+AGG | 0.590500 | 1:-35028779 | MsG0180002217.01.T01:CDS |
| GCGTTGGTTGGGATGAATGG+GGG | 0.596821 | 1:+35029317 | MsG0180002218.01.T01:CDS |
| TTGCCAGTGCTTGAGATCGG+AGG | 0.610798 | 1:-35028718 | MsG0180002217.01.T01:CDS |
| TGACGCGCTTCCTTGCGCGT+TGG | 0.621614 | 1:+35029301 | MsG0180002218.01.T01:CDS |
| CACTGGCAAAACCTCACTGA+CGG | 0.643079 | 1:+35028732 | MsG0180002218.01.T01:CDS |
| AGTGGCGTTCGCCGTCAGTG+AGG | 0.654051 | 1:-35028743 | MsG0180002217.01.T01:CDS |
| GGAAAGATCGACTTCTTCTG+CGG | 0.673797 | 1:-35028697 | MsG0180002217.01.T01:CDS |
| GAAGAGAATACATCTCAGAG+TGG | 0.694344 | 1:-35028902 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATCACTTATATACGTTTCA+AGG | - | Chr1:35028929-35028948 | None:intergenic | 25.0% |
| AATCCAATACCCAAAAATCT+GGG | + | Chr1:35028641-35028660 | MsG0180002218.01.T01:CDS | 30.0% | |
| ATCAATTCCATCCAATCAAA+CGG | - | Chr1:35029425-35029444 | None:intergenic | 30.0% | |
| ATGAATAGCTTGAATGGTAA+TGG | + | Chr1:35029509-35029528 | MsG0180002218.01.T01:CDS | 30.0% | |
| TCTGTTATGAATAGCTTGAA+TGG | + | Chr1:35029503-35029522 | MsG0180002218.01.T01:CDS | 30.0% | |
| TGATGCTGTTGAAATTGAAA+GGG | + | Chr1:35029268-35029287 | MsG0180002218.01.T01:CDS | 30.0% | |
| TTTGTTGCTGATAGGTTATT+GGG | + | Chr1:35029362-35029381 | MsG0180002218.01.T01:CDS | 30.0% | |
| ! | TGTACATTTCCCAGATTTTT+GGG | - | Chr1:35028653-35028672 | MsG0180002217.01.T01:CDS | 30.0% |
| ! | TTGTACATTTCCCAGATTTT+TGG | - | Chr1:35028654-35028673 | MsG0180002217.01.T01:CDS | 30.0% |
| !! | ATATTGAGTTTGTTGCTGAT+AGG | + | Chr1:35029354-35029373 | MsG0180002218.01.T01:CDS | 30.0% |
| !!! | AGATTTTTGGGTATTGGATT+GGG | - | Chr1:35028641-35028660 | MsG0180002217.01.T01:CDS | 30.0% |
| !!! | ATTTTCTGGTTGAAAAAACG+TGG | + | Chr1:35029113-35029132 | MsG0180002218.01.T01:CDS | 30.0% |
| AAAAAACGTGGTTTAATGCC+GGG | + | Chr1:35029125-35029144 | MsG0180002218.01.T01:CDS | 35.0% | |
| ATGTTCAGAATCCGTTTGAT+TGG | + | Chr1:35029411-35029430 | MsG0180002218.01.T01:CDS | 35.0% | |
| CAATCCAATACCCAAAAATC+TGG | + | Chr1:35028640-35028659 | MsG0180002218.01.T01:CDS | 35.0% | |
| GAAAAAACGTGGTTTAATGC+CGG | + | Chr1:35029124-35029143 | MsG0180002218.01.T01:CDS | 35.0% | |
| GTGATGCTGTTGAAATTGAA+AGG | + | Chr1:35029267-35029286 | MsG0180002218.01.T01:CDS | 35.0% | |
| TATCGCGAAAAAAGCTGATT+GGG | + | Chr1:35028995-35029014 | MsG0180002218.01.T01:CDS | 35.0% | |
| TGAAATAAGCTCGTTTGAGA+AGG | - | Chr1:35029156-35029175 | MsG0180002219.01.T01:CDS | 35.0% | |
| TGCAATCTGGAAACCATAAA+AGG | - | Chr1:35028871-35028890 | None:intergenic | 35.0% | |
| ! | ATGGAATTGATTTCGCTTCA+AGG | + | Chr1:35029434-35029453 | MsG0180002218.01.T01:CDS | 35.0% |
| ! | GGATGTTTTCAATTGCAATC+TGG | - | Chr1:35028884-35028903 | None:intergenic | 35.0% |
| ! | GTTGAAGGAATCTTTTTCTC+CGG | + | Chr1:35029077-35029096 | MsG0180002218.01.T01:CDS | 35.0% |
| ! | GTTTGTTGCTGATAGGTTAT+TGG | + | Chr1:35029361-35029380 | MsG0180002218.01.T01:CDS | 35.0% |
| ! | TGGAATTGATTTCGCTTCAA+GGG | + | Chr1:35029435-35029454 | MsG0180002218.01.T01:CDS | 35.0% |
| !!! | CAGATTTTTGGGTATTGGAT+TGG | - | Chr1:35028642-35028661 | MsG0180002217.01.T01:CDS | 35.0% |
| !!! | TGCTGATTTTTGCTTCAAGT+TGG | + | Chr1:35029535-35029554 | MsG0180002218.01.T01:CDS | 35.0% |
| !!! | TTTCCCAGATTTTTGGGTAT+TGG | - | Chr1:35028647-35028666 | MsG0180002217.01.T01:CDS | 35.0% |
| GAAAATCGCACAGAAACTTC+CGG | - | Chr1:35029099-35029118 | MsG0180002219.01.T01:CDS | 40.0% | |
| GAAGAGAATACATCTCAGAG+TGG | - | Chr1:35028905-35028924 | None:intergenic | 40.0% | |
| GTATCGCGAAAAAAGCTGAT+TGG | + | Chr1:35028994-35029013 | MsG0180002218.01.T01:CDS | 40.0% | |
| GTTGCATTTGCTTGTGTTGA+AGG | + | Chr1:35029062-35029081 | MsG0180002218.01.T01:CDS | 40.0% | |
| TCAGAATCCGTTTGATTGGA+TGG | + | Chr1:35029415-35029434 | MsG0180002218.01.T01:CDS | 40.0% | |
| TCGTTTGAGAAGGTTAATCC+CGG | - | Chr1:35029146-35029165 | MsG0180002219.01.T01:CDS | 40.0% | |
| ! | GAAGTTTCTGTGCGATTTTC+TGG | + | Chr1:35029099-35029118 | MsG0180002218.01.T01:CDS | 40.0% |
| !!! | AACTTTTTTGAGAAGCGCGT+TGG | + | Chr1:35029464-35029483 | MsG0180002218.01.T01:CDS | 40.0% |
| !!! | ACTTTTTTGAGAAGCGCGTT+GGG | + | Chr1:35029465-35029484 | MsG0180002218.01.T01:CDS | 40.0% |
| !!! | TCAGCTTTTTTCGCGATACA+TGG | - | Chr1:35028993-35029012 | MsG0180002219.01.T01:CDS | 40.0% |
| AAAAAGCCGAAGCCTCATTC+TGG | + | Chr1:35028673-35028692 | MsG0180002218.01.T01:CDS | 45.0% | |
| AAGCTGATTGGGCGATGAAA+TGG | + | Chr1:35029006-35029025 | MsG0180002218.01.T01:CDS | 45.0% | |
| GAGCTTATTTCACGCGATGA+AGG | + | Chr1:35029164-35029183 | MsG0180002218.01.T01:CDS | 45.0% | |
| GATAGGTTATTGGGTGAGCT+TGG | + | Chr1:35029371-35029390 | MsG0180002218.01.T01:CDS | 45.0% | |
| ! | ACCATAAAAGGCACGTGCTT+CGG | - | Chr1:35028859-35028878 | None:intergenic | 45.0% |
| ! | ATCTACCAGCGAGATTTTCG+AGG | - | Chr1:35028815-35028834 | None:intergenic | 45.0% |
| ! | GGAAAGATCGACTTCTTCTG+CGG | - | Chr1:35028700-35028719 | MsG0180002217.01.T01:CDS | 45.0% |
| ! | GTTTTGCCAGTGCTTGAGAT+CGG | - | Chr1:35028724-35028743 | MsG0180002217.01.T01:CDS | 45.0% |
| !!! | CTTTTTTGAGAAGCGCGTTG+GGG | + | Chr1:35029466-35029485 | MsG0180002218.01.T01:CDS | 45.0% |
| ATCGTCCTCGAAAATCTCGC+TGG | + | Chr1:35028807-35028826 | MsG0180002218.01.T01:CDS | 50.0% | |
| CACTGGCAAAACCTCACTGA+CGG | + | Chr1:35028732-35028751 | MsG0180002218.01.T01:CDS | 50.0% | |
| CGAGGACATGTGAGATGAAG+TGG | - | Chr1:35028764-35028783 | MsG0180002217.01.T01:CDS | 50.0% | |
| GGGTGAGCTTGGTTGTGAAA+AGG | + | Chr1:35029382-35029401 | MsG0180002218.01.T01:CDS | 50.0% | |
| TTCTTCTGCGGTCCAGAATG+AGG | - | Chr1:35028688-35028707 | MsG0180002217.01.T01:CDS | 50.0% | |
| TTTCCTCCGATCTCAAGCAC+TGG | + | Chr1:35028715-35028734 | MsG0180002218.01.T01:CDS | 50.0% | |
| ! | TCCGAAGCACGTGCCTTTTA+TGG | + | Chr1:35028855-35028874 | MsG0180002218.01.T01:CDS | 50.0% |
| !! | ATTTTCGAGGACGATGCCGT+CGG | - | Chr1:35028802-35028821 | None:intergenic | 50.0% |
| TGCGGTCCAGAATGAGGCTT+CGG | - | Chr1:35028682-35028701 | MsG0180002217.01.T01:CDS | 55.0% | |
| TTCATCCCAACCAACGCGCA+AGG | - | Chr1:35029314-35029333 | None:intergenic | 55.0% | |
| TTGCCAGTGCTTGAGATCGG+AGG | - | Chr1:35028721-35028740 | MsG0180002217.01.T01:CDS | 55.0% | |
| !! | CGCGTTGGTTGGGATGAATG+GGG | + | Chr1:35029316-35029335 | MsG0180002218.01.T01:CDS | 55.0% |
| !! | GCGCGTTGGTTGGGATGAAT+GGG | + | Chr1:35029315-35029334 | MsG0180002218.01.T01:CDS | 55.0% |
| !! | GCGTTGGTTGGGATGAATGG+GGG | + | Chr1:35029317-35029336 | MsG0180002218.01.T01:CDS | 55.0% |
| !! | TGCGCGTTGGTTGGGATGAA+TGG | + | Chr1:35029314-35029333 | MsG0180002218.01.T01:CDS | 55.0% |
| AGGCACGTGCTTCGGAGACT+TGG | - | Chr1:35028851-35028870 | None:intergenic | 60.0% | |
| !! | CGCTTCCTTGCGCGTTGGTT+GGG | + | Chr1:35029306-35029325 | MsG0180002218.01.T01:CDS | 60.0% |
| AGTGGCGTTCGCCGTCAGTG+AGG | - | Chr1:35028746-35028765 | MsG0180002217.01.T01:CDS | 65.0% | |
| TGACGCGCTTCCTTGCGCGT+TGG | + | Chr1:35029301-35029320 | MsG0180002218.01.T01:CDS | 65.0% | |
| TTCGAGGACGATGCCGTCGG+AGG | - | Chr1:35028799-35028818 | None:intergenic | 65.0% | |
| ! | GCGCTTCCTTGCGCGTTGGT+TGG | + | Chr1:35029305-35029324 | MsG0180002218.01.T01:CDS | 65.0% |
| GAGGACGATGCCGTCGGAGG+CGG | - | Chr1:35028796-35028815 | None:intergenic | 70.0% | |
| GCCTTCTTCGCCGCCTCCGA+CGG | + | Chr1:35028783-35028802 | MsG0180002218.01.T01:CDS | 70.0% | |
| CGGAGGCGGCGAAGAAGGCG+AGG | - | Chr1:35028782-35028801 | MsG0180002217.01.T01:CDS | 75.0% | |
| GCCGTCGGAGGCGGCGAAGA+AGG | - | Chr1:35028787-35028806 | MsG0180002217.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 35028633 | 35029571 | 35028633 | ID=MsG0180002218.01;Name=MsG0180002218.01 |
| Chr1 | mRNA | 35028633 | 35029571 | 35028633 | ID=MsG0180002218.01.T01;Parent=MsG0180002218.01;Name=MsG0180002218.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|312 |
| Chr1 | exon | 35028633 | 35029571 | 35028633 | ID=MsG0180002218.01.T01:exon:46034;Parent=MsG0180002218.01.T01 |
| Chr1 | CDS | 35028633 | 35029571 | 35028633 | ID=MsG0180002218.01.T01:cds;Parent=MsG0180002218.01.T01 |
| Gene Sequence |
| Protein sequence |
