AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000718.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000718.01.T01 MTR_1g009890 85.284 299 17 1 1 299 1 272 0.0 515
MsG0180000718.01.T01 MTR_4g127950 36.634 303 151 9 5 298 4 274 8.23e-56 182
MsG0180000718.01.T01 MTR_4g127950 40.400 250 112 6 5 248 4 222 3.77e-53 174
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000718.01.T01 AT2G24490 43.279 305 135 6 1 297 1 275 4.05e-78 239
MsG0180000718.01.T01 AT2G24490 43.279 305 135 6 1 297 1 275 4.05e-78 239
MsG0180000718.01.T01 AT3G02920 38.411 302 141 9 7 297 6 273 3.09e-57 186
MsG0180000718.01.T01 AT3G02920 39.130 253 111 8 7 250 6 224 3.80e-45 153
MsG0180000718.01.T01 AT3G02920 39.130 253 111 8 7 250 6 224 3.80e-45 153

Find 88 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCATGTATGTTCGTGTTTA+TGG 0.173114 1:-10185927 MsG0180000718.01.T01:CDS
TACACCGTTAATTGAGAAAT+TGG 0.204082 1:+10187118 None:intergenic
TTAATAAAATATAAACAAAA+TGG 0.250551 1:+10185838 None:intergenic
ACTCAAGGATATTGATAAAT+TGG 0.304503 1:-10183316 MsG0180000718.01.T01:CDS
ATATTGATGTTGGTCTGTTT+TGG 0.322076 1:-10182536 MsG0180000718.01.T01:three_prime_UTR
CTTATCTGCTTCACCGTAAC+CGG 0.334990 1:+10187170 None:intergenic
ATAAGTGAAGCTTCTCATTC+TGG 0.354608 1:-10187152 MsG0180000718.01.T01:CDS
TCAATATCACCGGTGGTTCT+TGG 0.355850 1:+10182552 None:intergenic
GTTGAAGAGTCGTGATTCTC+AGG 0.358292 1:-10187201 MsG0180000718.01.T01:intron
TGATTCTCAGGGTTTGATTC+CGG 0.362961 1:-10187189 MsG0180000718.01.T01:CDS
TCAGGGTTTGATTCCGGTTA+CGG 0.363797 1:-10187183 MsG0180000718.01.T01:CDS
GTCGCTGAAGGCTACTTTAG+AGG 0.369019 1:-10182661 MsG0180000718.01.T01:CDS
AAGTCCAATTTCTCAATTAA+CGG 0.371450 1:-10187122 MsG0180000718.01.T01:CDS
TTTAGTCAAAAGACATAATA+CGG 0.379640 1:+10182423 None:intergenic
GCATGTATGTTCGTGTTTAT+GGG 0.401786 1:-10185926 MsG0180000718.01.T01:CDS
AACTTGTCGCCTTCTCTGTC+AGG 0.412244 1:-10185875 MsG0180000718.01.T01:CDS
GGCGTTGGAGGCATCGAATT+GGG 0.412602 1:+10187371 None:intergenic
TGAAAAGCTTTCAAGGTGTA+AGG 0.417247 1:-10185899 MsG0180000718.01.T01:CDS
AGGCGTTGGAGGCATCGAAT+TGG 0.421359 1:+10187370 None:intergenic
CTTTCAGTTTGTTGCCTGCA+TGG 0.422993 1:-10185794 MsG0180000718.01.T01:intron
TTGGTTCAGGTTACATTGGT+TGG 0.431208 1:-10186282 MsG0180000718.01.T01:intron
GGGTCCTTGAAAAGCTTTCA+AGG 0.432153 1:-10185906 MsG0180000718.01.T01:CDS
TAATAAAATATAAACAAAAT+GGG 0.433249 1:+10185839 None:intergenic
CCTGTCAGAAATGTTTCAAA+TGG 0.445690 1:-10183463 MsG0180000718.01.T01:CDS
TGCAGTCGATAAAGTGAAAC+GGG 0.449660 1:+10183788 None:intergenic
CCTTTAGTTTGCTGCGGAGG+TGG 0.453665 1:+10183758 None:intergenic
TTTGTCTTGGATGATGGAAC+TGG 0.456132 1:-10186219 MsG0180000718.01.T01:CDS
GATGCCTCCAACGCCTTCTC+CGG 0.468351 1:-10187363 MsG0180000718.01.T01:CDS
TCCAACGCCTTCTCCGGCGG+CGG 0.469400 1:-10187357 MsG0180000718.01.T01:CDS
AAATGTTTCAAATGGATCTC+AGG 0.471853 1:-10183455 MsG0180000718.01.T01:CDS
AATGCTGCTGCAGATAGTTA+AGG 0.473253 1:+10183292 None:intergenic
CCATTTGAAACATTTCTGAC+AGG 0.490871 1:+10183463 None:intergenic
TCAGGTTACATTGGTTGGAA+TGG 0.491482 1:-10186277 MsG0180000718.01.T01:intron
TTCATAGACGAGTTTGATGA+AGG 0.492894 1:+10183490 None:intergenic
AAAGAATATAGCTGAGGATC+GGG 0.495302 1:-10182575 MsG0180000718.01.T01:three_prime_UTR
TTTGTAGTGGGAATCATCTA+TGG 0.496308 1:+10182620 None:intergenic
AAGATAGCGCTTACTTTAGT+CGG 0.498495 1:+10187297 None:intergenic
CCTGCAGAAAGTACCATCTT+CGG 0.499168 1:+10186184 None:intergenic
CATGAATCCGCCGCCGGAGA+AGG 0.506036 1:+10187350 None:intergenic
TTCGAAAATGAAATGAAAGA+TGG 0.507577 1:+10187589 None:intergenic
AAATATAAACAAAATGGGTA+TGG 0.509229 1:+10185844 None:intergenic
TCAGGCACCATCATCAAATC+CGG 0.520388 1:-10183437 MsG0180000718.01.T01:intron
TATGTACAATATAGCACTGA+TGG 0.524876 1:-10183339 MsG0180000718.01.T01:CDS
TGGAATGGTGTATGAGAAAG+TGG 0.525821 1:-10186262 MsG0180000718.01.T01:CDS
GGAGGCATCGAATTGGGAGT+TGG 0.527700 1:+10187377 None:intergenic
GCCGCCGGAGAAGGCGTTGG+AGG 0.529754 1:+10187359 None:intergenic
CCACCTCCGCAGCAAACTAA+AGG 0.530775 1:-10183758 MsG0180000718.01.T01:intron
TAAAGAATATAGCTGAGGAT+CGG 0.539485 1:-10182576 MsG0180000718.01.T01:three_prime_UTR
GCGCTTACTTTAGTCGGTGC+CGG 0.541742 1:+10187303 None:intergenic
TATCATACCGGATTTGATGA+TGG 0.544661 1:+10183430 None:intergenic
AATATCAAGCAAGTTTGTAG+TGG 0.546197 1:+10182607 None:intergenic
ATGCAGTCGATAAAGTGAAA+CGG 0.549087 1:+10183787 None:intergenic
GGCTACTTTAGAGGACGGTA+CGG 0.549974 1:-10182652 MsG0180000718.01.T01:CDS
TTGAAGAGTCGTGATTCTCA+GGG 0.553382 1:-10187200 MsG0180000718.01.T01:intron
AGGATCGGGCCAAGAACCAC+CGG 0.556128 1:-10182561 MsG0180000718.01.T01:three_prime_UTR
ATCTCATCAAAATTTGTCAC+GGG 0.561995 1:+10183811 None:intergenic
TAATGCCAGGTTGTCGCTGA+AGG 0.562273 1:-10182673 MsG0180000718.01.T01:intron
CGGTGCCGGAGAAGAATCGT+TGG 0.563089 1:+10187317 None:intergenic
GACGGATCAAATGCCGAAGA+TGG 0.564541 1:-10186197 MsG0180000718.01.T01:intron
GTGAGATCATTTAAAGTGCT+CGG 0.567408 1:+10182397 None:intergenic
TCCGCCGCCGGAGAAGGCGT+TGG 0.569147 1:+10187356 None:intergenic
ACTCACATGATCTTGTCCAC+TGG 0.569272 1:+10182780 None:intergenic
AGAAGAATCGTTGGGTTGCG+AGG 0.573054 1:+10187326 None:intergenic
GATCTCATCAAAATTTGTCA+CGG 0.573664 1:+10183810 None:intergenic
ATATCAAGCAAGTTTGTAGT+GGG 0.579740 1:+10182608 None:intergenic
TTACCTTTAGTTTGCTGCGG+AGG 0.584007 1:+10183755 None:intergenic
CGAGGACATGAATCCGCCGC+CGG 0.585196 1:+10187344 None:intergenic
AAGAGAAAATCAAACCATGC+AGG 0.587827 1:+10185780 None:intergenic
GCCTCCAACGCCTTCTCCGG+CGG 0.589648 1:-10187360 MsG0180000718.01.T01:CDS
AAGTTGAAACCCTAAGCGGC+GGG 0.592551 1:-10187543 MsG0180000718.01.T01:five_prime_UTR
GGTGCCGGAGAAGAATCGTT+GGG 0.594405 1:+10187318 None:intergenic
GCAACCCAACGATTCTTCTC+CGG 0.596159 1:-10187322 MsG0180000718.01.T01:CDS
ATATAGCACTGATGGACTCA+AGG 0.596259 1:-10183331 MsG0180000718.01.T01:CDS
AAAATCGAAGCATTTCTAGC+GGG 0.605483 1:-10187519 MsG0180000718.01.T01:five_prime_UTR
GCAAACATGCCTGACAGAGA+AGG 0.607002 1:+10185866 None:intergenic
TGTTTACCTTTAGTTTGCTG+CGG 0.607394 1:+10183752 None:intergenic
ACCACCGGTGATATTGATGT+TGG 0.608508 1:-10182546 MsG0180000718.01.T01:three_prime_UTR
CTGAAAGCAAATAAACAACA+TGG 0.622166 1:+10185810 None:intergenic
AAAGTTGAAACCCTAAGCGG+CGG 0.629739 1:-10187544 MsG0180000718.01.T01:five_prime_UTR
CAGACCAACATCAATATCAC+CGG 0.630232 1:+10182542 None:intergenic
GTAGTGGGAATCATCTATGG+TGG 0.656595 1:+10182623 None:intergenic
TGGTGTATGAGAAAGTGGAG+AGG 0.659213 1:-10186257 MsG0180000718.01.T01:CDS
CTGAAGGCTACTTTAGAGGA+CGG 0.662582 1:-10182657 MsG0180000718.01.T01:CDS
AAGAGAGCTCAAGCTTCCAG+TGG 0.665972 1:-10182796 MsG0180000718.01.T01:CDS
TCATCTAAAGAATATAGCTG+AGG 0.685865 1:-10182581 MsG0180000718.01.T01:three_prime_UTR
ACCAACATCAATATCACCGG+TGG 0.687753 1:+10182545 None:intergenic
TCTTGGATGATGGAACTGGA+CGG 0.689698 1:-10186215 MsG0180000718.01.T01:CDS
TCAAAAGTTGAAACCCTAAG+CGG 0.726126 1:-10187547 MsG0180000718.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTATTACTTTTCATTAA+TGG - Chr1:10186774-10186793 MsG0180000718.01.T01:intron 10.0%
!!! TTAAATATGTTTTATTTTAC+TGG + Chr1:10185357-10185376 None:intergenic 10.0%
!!! AAACCAAAAAATCATTTTAT+TGG + Chr1:10185989-10186008 None:intergenic 15.0%
!!! AACCAAAAAATCATTTTATT+GGG + Chr1:10185988-10186007 None:intergenic 15.0%
!!! ATATAATTTTTCTAACTTCA+GGG - Chr1:10186639-10186658 MsG0180000718.01.T01:intron 15.0%
!!! GTTAATAGCAAAATTTTATT+AGG + Chr1:10185166-10185185 None:intergenic 15.0%
!!! TCATTTTCTCATATTATTAT+GGG - Chr1:10183249-10183268 MsG0180000718.01.T01:intron 15.0%
!! AAATATAAACAAAATGGGTA+TGG + Chr1:10184161-10184180 None:intergenic 20.0%
!! AATAGAACAGTTATAGATAA+TGG + Chr1:10185004-10185023 None:intergenic 20.0%
!! AGTATCATATAAACTGAAAT+TGG + Chr1:10187125-10187144 None:intergenic 20.0%
!! TAATCCAAAAAACAAAAGTA+AGG + Chr1:10186465-10186484 None:intergenic 20.0%
!! TATTATTGCATGATAATTGA+TGG - Chr1:10186307-10186326 MsG0180000718.01.T01:intron 20.0%
!! TTTAGTCAAAAGACATAATA+CGG + Chr1:10187582-10187601 None:intergenic 20.0%
!!! AAAATGATTTTACAATCTTC+AGG + Chr1:10184710-10184729 None:intergenic 20.0%
!!! ATTTTAAATTGCAGAGATAT+GGG - Chr1:10187162-10187181 MsG0180000718.01.T01:CDS 20.0%
!!! GACTGATTTCATATATTTTA+AGG + Chr1:10183168-10183187 None:intergenic 20.0%
!!! GATATAATTTTTCTAACTTC+AGG - Chr1:10186638-10186657 MsG0180000718.01.T01:intron 20.0%
!!! GATTATTTATGACTTCTTTT+CGG - Chr1:10183855-10183874 MsG0180000718.01.T01:intron 20.0%
!!! GTCATTTTCTCATATTATTA+TGG - Chr1:10183248-10183267 MsG0180000718.01.T01:intron 20.0%
!!! TAGGCTAATTTATTTTAACT+CGG - Chr1:10185726-10185745 MsG0180000718.01.T01:intron 20.0%
!!! TGATTAATTGTATGCATTTT+TGG - Chr1:10186909-10186928 MsG0180000718.01.T01:intron 20.0%
!!! TGTTATTTTTACATGTTACA+AGG - Chr1:10186867-10186886 MsG0180000718.01.T01:intron 20.0%
!!! TGTTTTGAATCATTAATCAA+TGG + Chr1:10184794-10184813 None:intergenic 20.0%
!!! TTCCCAATAAAATGATTTTT+TGG - Chr1:10185983-10186002 MsG0180000718.01.T01:intron 20.0%
!!! TTTAACTCGTTGTATATTTT+TGG - Chr1:10183701-10183720 MsG0180000718.01.T01:intron 20.0%
!!! TTTTGTATTTGTCTCATTTT+GGG - Chr1:10187266-10187285 MsG0180000718.01.T01:intron 20.0%
!!! TTTTTGTATTTGTCTCATTT+TGG - Chr1:10187265-10187284 MsG0180000718.01.T01:intron 20.0%
!!! TTTTTGTTTGTTTTGATCTT+AGG + Chr1:10185425-10185444 None:intergenic 20.0%
!!! TTTTTTGGATTATAGATAGA+AGG - Chr1:10186473-10186492 MsG0180000718.01.T01:intron 20.0%
! AAAACTGTTGTCAATATTTC+TGG - Chr1:10186950-10186969 MsG0180000718.01.T01:intron 25.0%
! AAATTTCTTAACATGTGTTG+TGG - Chr1:10183880-10183899 MsG0180000718.01.T01:intron 25.0%
! AAGTCCAATTTCTCAATTAA+CGG - Chr1:10182880-10182899 MsG0180000718.01.T01:intron 25.0%
! ACTCAAGGATATTGATAAAT+TGG - Chr1:10186686-10186705 MsG0180000718.01.T01:intron 25.0%
! ACTTACATCAAATATCATAC+CGG + Chr1:10186587-10186606 None:intergenic 25.0%
! ACTTCCAATGATCTTATAAA+TGG + Chr1:10186387-10186406 None:intergenic 25.0%
! AGTAGACTGAATTTCATTAT+TGG - Chr1:10183905-10183924 MsG0180000718.01.T01:intron 25.0%
! ATATACAACGAGTTAAATAG+AGG + Chr1:10183698-10183717 None:intergenic 25.0%
! CGGTGAGATTTAAATTTAAA+TGG - Chr1:10184676-10184695 MsG0180000718.01.T01:intron 25.0%
! CTTCCAATGATCTTATAAAT+GGG + Chr1:10186386-10186405 None:intergenic 25.0%
! TAACCCATTTATAAGATCAT+TGG - Chr1:10186380-10186399 MsG0180000718.01.T01:intron 25.0%
! TAATTATTCATTGACAGGAA+TGG - Chr1:10184054-10184073 MsG0180000718.01.T01:intron 25.0%
! TACTGTAAGTACTTTAACTA+TGG - Chr1:10183978-10183997 MsG0180000718.01.T01:intron 25.0%
! TGTCAATGAATAATTAGAGA+AGG + Chr1:10184050-10184069 None:intergenic 25.0%
! TTATTATTCACTCTGCTTTA+GGG + Chr1:10185297-10185316 None:intergenic 25.0%
! TTCGAAAATGAAATGAAAGA+TGG + Chr1:10182416-10182435 None:intergenic 25.0%
! TTCTCTAATTATTCATTGAC+AGG - Chr1:10184049-10184068 MsG0180000718.01.T01:intron 25.0%
! TTTATTATTCACTCTGCTTT+AGG + Chr1:10185298-10185317 None:intergenic 25.0%
!! ATTTTCATGTTTTGTCTCAT+GGG - Chr1:10184455-10184474 MsG0180000718.01.T01:intron 25.0%
!! CATTATTGGTTGTTTAATCA+GGG - Chr1:10183919-10183938 MsG0180000718.01.T01:intron 25.0%
!! CTTTAAGAGGTTTCATTAAT+GGG - Chr1:10184944-10184963 MsG0180000718.01.T01:intron 25.0%
!! GATTTTAAATTGCAGAGATA+TGG - Chr1:10187161-10187180 MsG0180000718.01.T01:CDS 25.0%
!! TCATTATTGGTTGTTTAATC+AGG - Chr1:10183918-10183937 MsG0180000718.01.T01:intron 25.0%
!! TTATTGTAGCATGGTTATTT+TGG - Chr1:10183552-10183571 MsG0180000718.01.T01:intron 25.0%
!! TTTCATTAATGGTTTCAAGT+AGG - Chr1:10186785-10186804 MsG0180000718.01.T01:intron 25.0%
!! TTTCTTTTGTATGATTTTCG+TGG - Chr1:10183016-10183035 MsG0180000718.01.T01:intron 25.0%
!! TTTTGTAGCTGAATTTTTCT+TGG - Chr1:10185459-10185478 MsG0180000718.01.T01:intron 25.0%
!!! AATGCCTTACTTTTGTTTTT+TGG - Chr1:10186458-10186477 MsG0180000718.01.T01:intron 25.0%
!!! AATTGGCTGTTTTAATCATA+TGG - Chr1:10186140-10186159 MsG0180000718.01.T01:intron 25.0%
!!! ATGTCTTTGATTTGTCAAAT+TGG - Chr1:10186123-10186142 MsG0180000718.01.T01:intron 25.0%
!!! CTGTTTCTTTAGTTTTTGAT+TGG - Chr1:10186609-10186628 MsG0180000718.01.T01:intron 25.0%
!!! TATAAGTTTTTGAGCTAATG+TGG + Chr1:10185830-10185849 None:intergenic 25.0%
!!! TATTGTAGCATGGTTATTTT+GGG - Chr1:10183553-10183572 MsG0180000718.01.T01:intron 25.0%
!!! TTATTTTACTGGAAATGTGT+CGG + Chr1:10185346-10185365 None:intergenic 25.0%
AAATGTTTCAAATGGATCTC+AGG - Chr1:10186547-10186566 MsG0180000718.01.T01:intron 30.0%
AATATCAAGCAAGTTTGTAG+TGG + Chr1:10187398-10187417 None:intergenic 30.0%
AATGACTGTTGTGTATGAAT+GGG + Chr1:10183534-10183553 None:intergenic 30.0%
AATTTACACCTTACAGAACA+TGG - Chr1:10185611-10185630 MsG0180000718.01.T01:intron 30.0%
ACAATCTTATACCTGGTTAT+GGG - Chr1:10185911-10185930 MsG0180000718.01.T01:CDS 30.0%
ACCATAACCCATAATTTGAA+CGG + Chr1:10184482-10184501 None:intergenic 30.0%
AGTAAAGACAATCTTATACC+TGG - Chr1:10185904-10185923 MsG0180000718.01.T01:CDS 30.0%
ATATATGGGTGATTGTGTAT+AGG - Chr1:10184408-10184427 MsG0180000718.01.T01:intron 30.0%
ATATCAAGCAAGTTTGTAGT+GGG + Chr1:10187397-10187416 None:intergenic 30.0%
ATCTCATCAAAATTTGTCAC+GGG + Chr1:10186194-10186213 None:intergenic 30.0%
ATGATATAGATTTACGAGTC+TGG - Chr1:10184007-10184026 MsG0180000718.01.T01:intron 30.0%
ATTTACACCTTACAGAACAT+GGG - Chr1:10185612-10185631 MsG0180000718.01.T01:intron 30.0%
CAAAGCATGATATTTAGTAG+TGG - Chr1:10186041-10186060 MsG0180000718.01.T01:intron 30.0%
CAGTTTATGAACTAAATTGC+TGG + Chr1:10183134-10183153 None:intergenic 30.0%
CTGAAAGCAAATAAACAACA+TGG + Chr1:10184195-10184214 None:intergenic 30.0%
CTTGAAGTGAATGATTGTAA+CGG + Chr1:10187010-10187029 None:intergenic 30.0%
GATCTCATCAAAATTTGTCA+CGG + Chr1:10186195-10186214 None:intergenic 30.0%
GTTGAAAGAGGAGAAATTTA+GGG + Chr1:10187094-10187113 None:intergenic 30.0%
TAAAGAATATAGCTGAGGAT+CGG - Chr1:10187426-10187445 MsG0180000718.01.T01:five_prime_UTR 30.0%
TAAATCGTTTGTCTAATAGC+TGG - Chr1:10185848-10185867 MsG0180000718.01.T01:CDS 30.0%
TAACGGAAAAGATGAAATGT+TGG + Chr1:10186993-10187012 None:intergenic 30.0%
TAATGACTGTTGTGTATGAA+TGG + Chr1:10183535-10183554 None:intergenic 30.0%
TACACCGTTAATTGAGAAAT+TGG + Chr1:10182887-10182906 None:intergenic 30.0%
TCATATTTGTGATGTTTCAC+AGG - Chr1:10186168-10186187 MsG0180000718.01.T01:intron 30.0%
TCATCTAAAGAATATAGCTG+AGG - Chr1:10187421-10187440 MsG0180000718.01.T01:five_prime_UTR 30.0%
TGATATAGATTTACGAGTCT+GGG - Chr1:10184008-10184027 MsG0180000718.01.T01:intron 30.0%
TGCTTTGTAATTCAACAAAC+AGG + Chr1:10186028-10186047 None:intergenic 30.0%
TGTGTAACTGAATGCTTAAT+AGG - Chr1:10184629-10184648 MsG0180000718.01.T01:intron 30.0%
TGTTGAAAGAGGAGAAATTT+AGG + Chr1:10187095-10187114 None:intergenic 30.0%
TTGGCAAATATTGTTGAAAG+AGG + Chr1:10187106-10187125 None:intergenic 30.0%
TTTATGTGATGATACGAAAG+AGG + Chr1:10184315-10184334 None:intergenic 30.0%
! AAAAATCGAAGCATTTCTAG+CGG - Chr1:10182482-10182501 MsG0180000718.01.T01:three_prime_UTR 30.0%
! AAATGTTTTCACCAAGTACA+AGG + Chr1:10186823-10186842 None:intergenic 30.0%
! AATGTTTTCACCAAGTACAA+GGG + Chr1:10186822-10186841 None:intergenic 30.0%
! CACTGATGTTAATTTTGTCT+TGG - Chr1:10183770-10183789 MsG0180000718.01.T01:CDS 30.0%
! GATTTTCATGTTTTGTCTCA+TGG - Chr1:10184454-10184473 MsG0180000718.01.T01:intron 30.0%
! GTTAATTTTGTCTTGGATGA+TGG - Chr1:10183777-10183796 MsG0180000718.01.T01:CDS 30.0%
! TATGTACAATATAGCACTGA+TGG - Chr1:10186663-10186682 MsG0180000718.01.T01:intron 30.0%
! TGATATGCATTTTGTGTGAT+TGG - Chr1:10184884-10184903 MsG0180000718.01.T01:intron 30.0%
! TTCATTAATGGGTGTTATGT+AGG - Chr1:10184955-10184974 MsG0180000718.01.T01:intron 30.0%
!! AAATGAGAGTTTTGACACAA+AGG - Chr1:10183943-10183962 MsG0180000718.01.T01:intron 30.0%
!! ATATTGATGTTGGTCTGTTT+TGG - Chr1:10187466-10187485 MsG0180000718.01.T01:five_prime_UTR 30.0%
!! CATTTAGTTCTCTCTGTTAT+TGG - Chr1:10185390-10185409 MsG0180000718.01.T01:intron 30.0%
!! CTTTTGCTGTCTATTCTTAT+TGG - Chr1:10185055-10185074 MsG0180000718.01.T01:intron 30.0%
!! GAAATGTTGGTTTAAGATGA+TGG + Chr1:10186980-10186999 None:intergenic 30.0%
!! GCTTTAAGAGGTTTCATTAA+TGG - Chr1:10184943-10184962 MsG0180000718.01.T01:intron 30.0%
!!! AAATTTGAAGCTAGCTTTTG+TGG - Chr1:10183474-10183493 MsG0180000718.01.T01:CDS 30.0%
!!! AGGTTGATGTAGATATTTTC+TGG - Chr1:10187494-10187513 MsG0180000718.01.T01:five_prime_UTR 30.0%
!!! ATTTTTGGTTCAGGTTACAT+TGG - Chr1:10183716-10183735 MsG0180000718.01.T01:intron 30.0%
!!! TCGTTGTATATTTTTGGTTC+AGG - Chr1:10183707-10183726 MsG0180000718.01.T01:intron 30.0%
AAACATGAAAATCCAACCCT+CGG + Chr1:10184447-10184466 None:intergenic 35.0%
AAAGAATATAGCTGAGGATC+GGG - Chr1:10187427-10187446 MsG0180000718.01.T01:five_prime_UTR 35.0%
AACTGTAGGATATGTCTTGT+CGG + Chr1:10184754-10184773 None:intergenic 35.0%
AAGAAAAGAGGAGAGAACAA+AGG - Chr1:10185203-10185222 MsG0180000718.01.T01:intron 35.0%
AAGAGAAAATCAAACCATGC+AGG + Chr1:10184225-10184244 None:intergenic 35.0%
AAGATAGCGCTTACTTTAGT+CGG + Chr1:10182708-10182727 None:intergenic 35.0%
AATGCTTAATAGGAGCAAGT+TGG - Chr1:10184639-10184658 MsG0180000718.01.T01:intron 35.0%
ACAAAGCAAAAGCTCAACAT+TGG + Chr1:10184834-10184853 None:intergenic 35.0%
AGAAAAGAGGAGAGAACAAA+GGG - Chr1:10185204-10185223 MsG0180000718.01.T01:intron 35.0%
ATAAGTGAAGCTTCTCATTC+TGG - Chr1:10182850-10182869 MsG0180000718.01.T01:intron 35.0%
ATGCAGTCGATAAAGTGAAA+CGG + Chr1:10186218-10186237 None:intergenic 35.0%
CAAAAACATAGTCTGAAAGC+AGG + Chr1:10185659-10185678 None:intergenic 35.0%
CAACAGTCATTATTGTAGCA+TGG - Chr1:10183543-10183562 MsG0180000718.01.T01:intron 35.0%
CAATCAAAGCAAATTGAACG+TGG - Chr1:10187037-10187056 MsG0180000718.01.T01:intron 35.0%
CCTGTCAGAAATGTTTCAAA+TGG - Chr1:10186539-10186558 MsG0180000718.01.T01:intron 35.0%
GACAATCTTATACCTGGTTA+TGG - Chr1:10185910-10185929 MsG0180000718.01.T01:CDS 35.0%
GATATAGATTTACGAGTCTG+GGG - Chr1:10184009-10184028 MsG0180000718.01.T01:intron 35.0%
GCATGTATGTTCGTGTTTAT+GGG - Chr1:10184076-10184095 MsG0180000718.01.T01:intron 35.0%
GTTGTTAGGACTAAATTGAC+AGG + Chr1:10183335-10183354 None:intergenic 35.0%
TAGTGCATAGAGAAGAAAAG+AGG - Chr1:10185191-10185210 MsG0180000718.01.T01:intron 35.0%
TATCATACCGGATTTGATGA+TGG + Chr1:10186575-10186594 None:intergenic 35.0%
TCAAAAGTTGAAACCCTAAG+CGG - Chr1:10182455-10182474 MsG0180000718.01.T01:three_prime_UTR 35.0%
TCACAAACCAGAGTAACATT+AGG + Chr1:10185798-10185817 None:intergenic 35.0%
TGAAAAGCTTTCAAGGTGTA+AGG - Chr1:10184103-10184122 MsG0180000718.01.T01:intron 35.0%
TGGATACTGCATAAACTTTC+TGG - Chr1:10186333-10186352 MsG0180000718.01.T01:intron 35.0%
TTCATAGACGAGTTTGATGA+AGG + Chr1:10186515-10186534 None:intergenic 35.0%
TTCCTTGAACTAGTGACAAA+AGG + Chr1:10184273-10184292 None:intergenic 35.0%
TTCTGTCAATGAACATCAAC+TGG - Chr1:10185756-10185775 MsG0180000718.01.T01:intron 35.0%
TTTACACCTTACAGAACATG+GGG - Chr1:10185613-10185632 MsG0180000718.01.T01:intron 35.0%
! AATGTTGAGCTTTTGCTTTG+TGG - Chr1:10184833-10184852 MsG0180000718.01.T01:intron 35.0%
! ATTTTACAATCTTCAGGCTC+TGG + Chr1:10184704-10184723 None:intergenic 35.0%
! CCATTTGAAACATTTCTGAC+AGG + Chr1:10186542-10186561 None:intergenic 35.0%
! CTTAGGGTTTCAACTTTTGA+CGG + Chr1:10182455-10182474 None:intergenic 35.0%
! GTTTTTGCCTAATGTTACTC+TGG - Chr1:10185788-10185807 MsG0180000718.01.T01:intron 35.0%
! TACACCTTGAAAGCTTTTCA+AGG + Chr1:10184103-10184122 None:intergenic 35.0%
! TATGCATTTTGTGTGATTGG+TGG - Chr1:10184887-10184906 MsG0180000718.01.T01:intron 35.0%
! TCCGTTCAAATTATGGGTTA+TGG - Chr1:10184478-10184497 MsG0180000718.01.T01:intron 35.0%
! TTAATAGGAGCAAGTTGGAA+TGG - Chr1:10184644-10184663 MsG0180000718.01.T01:intron 35.0%
! TTGCCTCTAGTGTATACTTT+TGG - Chr1:10184918-10184937 MsG0180000718.01.T01:intron 35.0%
! TTTGTAGTGGGAATCATCTA+TGG + Chr1:10187385-10187404 None:intergenic 35.0%
!! AAAATCGAAGCATTTCTAGC+GGG - Chr1:10182483-10182502 MsG0180000718.01.T01:three_prime_UTR 35.0%
!! ATACTTTTGGCTGCTTTAAG+AGG - Chr1:10184931-10184950 MsG0180000718.01.T01:intron 35.0%
!! ATGGGTATTGATTTGTCAGT+GGG - Chr1:10183267-10183286 MsG0180000718.01.T01:intron 35.0%
!! ATTTGTTGCTTTCTCAGGAA+GGG - Chr1:10184582-10184601 MsG0180000718.01.T01:intron 35.0%
!! GAGTTTTGACACAAAGGAAA+TGG - Chr1:10183949-10183968 MsG0180000718.01.T01:intron 35.0%
!! TATGGGTATTGATTTGTCAG+TGG - Chr1:10183266-10183285 MsG0180000718.01.T01:intron 35.0%
!! TGTTTACCTTTAGTTTGCTG+CGG + Chr1:10186253-10186272 None:intergenic 35.0%
AACATGAAAATCCAACCCTC+GGG + Chr1:10184446-10184465 None:intergenic 40.0%
AATGCTGCTGCAGATAGTTA+AGG + Chr1:10186713-10186732 None:intergenic 40.0%
ATCAGAGTTGTATCCACAGA+AGG + Chr1:10184564-10184583 None:intergenic 40.0%
CAGACCAACATCAATATCAC+CGG + Chr1:10187463-10187482 None:intergenic 40.0%
CATGGGTCCGTTCAAATTAT+GGG - Chr1:10184472-10184491 MsG0180000718.01.T01:intron 40.0%
CTACCTCCACAAATGTAACA+AGG + Chr1:10185940-10185959 None:intergenic 40.0%
CTGGCATTATGAACAGCATT+GGG + Chr1:10187318-10187337 None:intergenic 40.0%
GGCATGTATGTTCGTGTTTA+TGG - Chr1:10184075-10184094 MsG0180000718.01.T01:intron 40.0%
GTCTGAAAGCAGGCTAAATA+AGG + Chr1:10185649-10185668 None:intergenic 40.0%
GTGTACATGCTTCATAGCTA+AGG - Chr1:10183299-10183318 MsG0180000718.01.T01:CDS 40.0%
GTTCAAGGAAATTACACACG+AGG - Chr1:10184283-10184302 MsG0180000718.01.T01:intron 40.0%
TCATGGGTCCGTTCAAATTA+TGG - Chr1:10184471-10184490 MsG0180000718.01.T01:intron 40.0%
TCGGGTGCTTGATCATATAT+GGG - Chr1:10184394-10184413 MsG0180000718.01.T01:intron 40.0%
TGAGCACGCTAGTATATGTA+AGG + Chr1:10186087-10186106 None:intergenic 40.0%
TGATTCTCAGGGTTTGATTC+CGG - Chr1:10182813-10182832 MsG0180000718.01.T01:CDS 40.0%
TGCAGTCGATAAAGTGAAAC+GGG + Chr1:10186217-10186236 None:intergenic 40.0%
TGGAATGGTGTATGAGAAAG+TGG - Chr1:10183740-10183759 MsG0180000718.01.T01:intron 40.0%
TGTCCTTGTTACATTTGTGG+AGG - Chr1:10185934-10185953 MsG0180000718.01.T01:CDS 40.0%
TTGAAGAGTCGTGATTCTCA+GGG - Chr1:10182802-10182821 MsG0180000718.01.T01:CDS 40.0%
TTTGTCGATATCCAACCTCT+CGG - Chr1:10184375-10184394 MsG0180000718.01.T01:intron 40.0%
! ACCCAAGTTTAGAGTCAACT+AGG - Chr1:10185707-10185726 MsG0180000718.01.T01:intron 40.0%
! AGCCTAGTTGACTCTAAACT+TGG + Chr1:10185712-10185731 None:intergenic 40.0%
! AGCCTTTTGTCACTAGTTCA+AGG - Chr1:10184268-10184287 MsG0180000718.01.T01:intron 40.0%
! AGTCCTAACAACTTGATAGC+AGG - Chr1:10183343-10183362 MsG0180000718.01.T01:CDS 40.0%
! ATCATTTTACAGTCCCCTGA+TGG - Chr1:10184722-10184741 MsG0180000718.01.T01:intron 40.0%
! CAGCCAAAAGTATACACTAG+AGG + Chr1:10184924-10184943 None:intergenic 40.0%
! CATTGGAAGCATACACTAGA+TGG + Chr1:10184817-10184836 None:intergenic 40.0%
! GCCTAGTTGACTCTAAACTT+GGG + Chr1:10185711-10185730 None:intergenic 40.0%
! GGTTTCAAGTAGGATGACTA+AGG - Chr1:10186795-10186814 MsG0180000718.01.T01:intron 40.0%
! GTCCTAACAACTTGATAGCA+GGG - Chr1:10183344-10183363 MsG0180000718.01.T01:CDS 40.0%
! TCAGGTTACATTGGTTGGAA+TGG - Chr1:10183725-10183744 MsG0180000718.01.T01:intron 40.0%
! TGCATGATAATTGATGGCAG+TGG - Chr1:10186313-10186332 MsG0180000718.01.T01:intron 40.0%
! TTGGTTCAGGTTACATTGGT+TGG - Chr1:10183720-10183739 MsG0180000718.01.T01:intron 40.0%
!! ATATAGCACTGATGGACTCA+AGG - Chr1:10186671-10186690 MsG0180000718.01.T01:intron 40.0%
!! CTCTGATTTGTTGCTTTCTC+AGG - Chr1:10184577-10184596 MsG0180000718.01.T01:intron 40.0%
!! GATTTGTTGCTTTCTCAGGA+AGG - Chr1:10184581-10184600 MsG0180000718.01.T01:intron 40.0%
!! TGTGTCGGCTGTTAGATAAT+AGG + Chr1:10185331-10185350 None:intergenic 40.0%
!! TTTGTCTTGGATGATGGAAC+TGG - Chr1:10183783-10183802 MsG0180000718.01.T01:CDS 40.0%
!! TTTGTTGCTTTCTCAGGAAG+GGG - Chr1:10184583-10184602 MsG0180000718.01.T01:intron 40.0%
!!! GTTGGTCTGTTTTGGTTCAT+AGG - Chr1:10187474-10187493 MsG0180000718.01.T01:five_prime_UTR 40.0%
AAAGGGAATGAAGCTCTGCT+AGG - Chr1:10185221-10185240 MsG0180000718.01.T01:intron 45.0%
AAAGTTGAAACCCTAAGCGG+CGG - Chr1:10182458-10182477 MsG0180000718.01.T01:three_prime_UTR 45.0%
ACCAACATCAATATCACCGG+TGG + Chr1:10187460-10187479 None:intergenic 45.0%
ACCACCGGTGATATTGATGT+TGG - Chr1:10187456-10187475 MsG0180000718.01.T01:five_prime_UTR 45.0%
ACCTAAGTGAGATCCTTCTG+TGG - Chr1:10184548-10184567 MsG0180000718.01.T01:intron 45.0%
ACTCACATGATCTTGTCCAC+TGG + Chr1:10187225-10187244 None:intergenic 45.0%
CATCATCCCCATGTTCTGTA+AGG + Chr1:10185622-10185641 None:intergenic 45.0%
CCAATGCTGTTCATAATGCC+AGG - Chr1:10187316-10187335 MsG0180000718.01.T01:CDS 45.0%
CCTGGCATTATGAACAGCAT+TGG + Chr1:10187319-10187338 None:intergenic 45.0%
CTCGGGTGCTTGATCATATA+TGG - Chr1:10184393-10184412 MsG0180000718.01.T01:intron 45.0%
CTTATCTGCTTCACCGTAAC+CGG + Chr1:10182835-10182854 None:intergenic 45.0%
GAGAGAGAGAGAGAGATTTG+TGG + Chr1:10182568-10182587 None:intergenic 45.0%
GCACTGTCACAAGACATAAC+AGG + Chr1:10185136-10185155 None:intergenic 45.0%
GGGTCCTTGAAAAGCTTTCA+AGG - Chr1:10184096-10184115 MsG0180000718.01.T01:intron 45.0%
GGGTGTCCTTGTTACATTTG+TGG - Chr1:10185931-10185950 MsG0180000718.01.T01:CDS 45.0%
GTGGTTTGATCACTGAGCTT+GGG - Chr1:10184852-10184871 MsG0180000718.01.T01:intron 45.0%
GTTGAAGAGTCGTGATTCTC+AGG - Chr1:10182801-10182820 MsG0180000718.01.T01:CDS 45.0%
TAACAAGGACACCCATAACC+AGG + Chr1:10185925-10185944 None:intergenic 45.0%
TAGGTGCAGATGAGAGACAA+GGG + Chr1:10184533-10184552 None:intergenic 45.0%
TATATGATCAAGCACCCGAG+AGG + Chr1:10184393-10184412 None:intergenic 45.0%
TCAATATCACCGGTGGTTCT+TGG + Chr1:10187453-10187472 None:intergenic 45.0%
TCAGGCACCATCATCAAATC+CGG - Chr1:10186565-10186584 MsG0180000718.01.T01:intron 45.0%
TCAGGGTTTGATTCCGGTTA+CGG - Chr1:10182819-10182838 MsG0180000718.01.T01:CDS 45.0%
TCCACAGAAGGATCTCACTT+AGG + Chr1:10184552-10184571 None:intergenic 45.0%
TCTCTCTCTCTCTCTCTCTA+GGG - Chr1:10182588-10182607 MsG0180000718.01.T01:three_prime_UTR 45.0%
TGACTAAGGACCCTTGTACT+TGG - Chr1:10186809-10186828 MsG0180000718.01.T01:intron 45.0%
TGGTGTATGAGAAAGTGGAG+AGG - Chr1:10183745-10183764 MsG0180000718.01.T01:intron 45.0%
TGTCACAAGACATAACAGGC+AGG + Chr1:10185132-10185151 None:intergenic 45.0%
TGTGGTTTGATCACTGAGCT+TGG - Chr1:10184851-10184870 MsG0180000718.01.T01:intron 45.0%
TTAGGTGCAGATGAGAGACA+AGG + Chr1:10184534-10184553 None:intergenic 45.0%
TTGTCGATATCCAACCTCTC+GGG - Chr1:10184376-10184395 MsG0180000718.01.T01:intron 45.0%
! CTGAAGGCTACTTTAGAGGA+CGG - Chr1:10187345-10187364 MsG0180000718.01.T01:CDS 45.0%
! GTAGTGGGAATCATCTATGG+TGG + Chr1:10187382-10187401 None:intergenic 45.0%
! GTCCCTGCTATCAAGTTGTT+AGG + Chr1:10183349-10183368 None:intergenic 45.0%
!! CCTGCAGAAAGTACCATCTT+CGG + Chr1:10183821-10183840 None:intergenic 45.0%
!! CTTTCAGTTTGTTGCCTGCA+TGG - Chr1:10184208-10184227 MsG0180000718.01.T01:intron 45.0%
!! TCTTGGATGATGGAACTGGA+CGG - Chr1:10183787-10183806 MsG0180000718.01.T01:CDS 45.0%
!! TTACCTTTAGTTTGCTGCGG+AGG + Chr1:10186250-10186269 None:intergenic 45.0%
!! TTGTTGCTTTCTCAGGAAGG+GGG - Chr1:10184584-10184603 MsG0180000718.01.T01:intron 45.0%
!! TAAACTATATAATTATAATT+TGG - Chr1:10184331-10184350 MsG0180000718.01.T01:intron 5.0%
!! TAATAAAATATAAACAAAAT+GGG + Chr1:10184166-10184185 None:intergenic 5.0%
!! TTAATAAAATATAAACAAAA+TGG + Chr1:10184167-10184186 None:intergenic 5.0%
!! TTAATTCAAAAAAAAAAAAA+AGG + Chr1:10182934-10182953 None:intergenic 5.0%
AACTTGTCGCCTTCTCTGTC+AGG - Chr1:10184127-10184146 MsG0180000718.01.T01:intron 50.0%
AAGAGAGCTCAAGCTTCCAG+TGG - Chr1:10187206-10187225 MsG0180000718.01.T01:intron 50.0%
AAGTTGAAACCCTAAGCGGC+GGG - Chr1:10182459-10182478 MsG0180000718.01.T01:three_prime_UTR 50.0%
AATTGCTTTGTCCCGAGGGT+TGG - Chr1:10184432-10184451 MsG0180000718.01.T01:intron 50.0%
AGGCAATTGCTTTGTCCCGA+GGG - Chr1:10184428-10184447 MsG0180000718.01.T01:intron 50.0%
CAAGTCTGCAGCTGAACTGT+AGG + Chr1:10184768-10184787 None:intergenic 50.0%
CCGAAGATGGTACTTTCTGC+AGG - Chr1:10183818-10183837 MsG0180000718.01.T01:intron 50.0%
CTCTCTCTCTCTCTCTCTCT+AGG - Chr1:10182573-10182592 MsG0180000718.01.T01:three_prime_UTR 50.0%
GACGGATCAAATGCCGAAGA+TGG - Chr1:10183805-10183824 MsG0180000718.01.T01:CDS 50.0%
GCAAACATGCCTGACAGAGA+AGG + Chr1:10184139-10184158 None:intergenic 50.0%
GCAACCCAACGATTCTTCTC+CGG - Chr1:10182680-10182699 MsG0180000718.01.T01:intron 50.0%
TAATGCCAGGTTGTCGCTGA+AGG - Chr1:10187329-10187348 MsG0180000718.01.T01:CDS 50.0%
TAGGCAATTGCTTTGTCCCG+AGG - Chr1:10184427-10184446 MsG0180000718.01.T01:intron 50.0%
! AGAAGAATCGTTGGGTTGCG+AGG + Chr1:10182679-10182698 None:intergenic 50.0%
! AGCAAGTTGGAATGGTGCTG+GGG - Chr1:10184652-10184671 MsG0180000718.01.T01:intron 50.0%
! GAGCAAGTTGGAATGGTGCT+GGG - Chr1:10184651-10184670 MsG0180000718.01.T01:intron 50.0%
! GGCTACTTTAGAGGACGGTA+CGG - Chr1:10187350-10187369 MsG0180000718.01.T01:CDS 50.0%
! GTCGCTGAAGGCTACTTTAG+AGG - Chr1:10187341-10187360 MsG0180000718.01.T01:CDS 50.0%
! TCGATTTTTCCCGCCGCTTA+GGG + Chr1:10182471-10182490 None:intergenic 50.0%
! TTCGATTTTTCCCGCCGCTT+AGG + Chr1:10182472-10182491 None:intergenic 50.0%
!! CTTGTCGGTGTCATCCATCA+GGG + Chr1:10184739-10184758 None:intergenic 50.0%
!! TCTTGTCGGTGTCATCCATC+AGG + Chr1:10184740-10184759 None:intergenic 50.0%
!! TTGTCGGTGTCATCCATCAG+GGG + Chr1:10184738-10184757 None:intergenic 50.0%
AGTAGCCTTCAGCGACAACC+TGG + Chr1:10187337-10187356 None:intergenic 55.0%
CCACCTCCGCAGCAAACTAA+AGG - Chr1:10186244-10186263 MsG0180000718.01.T01:CDS 55.0%
GCGCTTACTTTAGTCGGTGC+CGG + Chr1:10182702-10182721 None:intergenic 55.0%
TGATCAAGCACCCGAGAGGT+TGG + Chr1:10184389-10184408 None:intergenic 55.0%
TGCTTTCTCAGGAAGGGGGT+GGG - Chr1:10184588-10184607 MsG0180000718.01.T01:intron 55.0%
TTGCTTTCTCAGGAAGGGGG+TGG - Chr1:10184587-10184606 MsG0180000718.01.T01:intron 55.0%
! GCAAGTTGGAATGGTGCTGG+GGG - Chr1:10184653-10184672 MsG0180000718.01.T01:intron 55.0%
! GGAGCAAGTTGGAATGGTGC+TGG - Chr1:10184650-10184669 MsG0180000718.01.T01:intron 55.0%
! GGTGCCGGAGAAGAATCGTT+GGG + Chr1:10182687-10182706 None:intergenic 55.0%
!! AGGCGTTGGAGGCATCGAAT+TGG + Chr1:10182635-10182654 None:intergenic 55.0%
!! CCTTTAGTTTGCTGCGGAGG+TGG + Chr1:10186247-10186266 None:intergenic 55.0%
!! GAAGGGGGTGGGTTGTCAAA+GGG - Chr1:10184599-10184618 MsG0180000718.01.T01:intron 55.0%
!! GGAGGCATCGAATTGGGAGT+TGG + Chr1:10182628-10182647 None:intergenic 55.0%
!! GGCGTTGGAGGCATCGAATT+GGG + Chr1:10182634-10182653 None:intergenic 55.0%
AGGATCGGGCCAAGAACCAC+CGG - Chr1:10187441-10187460 MsG0180000718.01.T01:five_prime_UTR 60.0%
GATGCCTCCAACGCCTTCTC+CGG - Chr1:10182639-10182658 MsG0180000718.01.T01:CDS 60.0%
! AGTTGGAATGGTGCTGGGGG+CGG - Chr1:10184656-10184675 MsG0180000718.01.T01:intron 60.0%
! CGGTGCCGGAGAAGAATCGT+TGG + Chr1:10182688-10182707 None:intergenic 60.0%
!! GGAAGGGGGTGGGTTGTCAA+AGG - Chr1:10184598-10184617 MsG0180000718.01.T01:intron 60.0%
CATGAATCCGCCGCCGGAGA+AGG + Chr1:10182655-10182674 None:intergenic 65.0%
CGAGGACATGAATCCGCCGC+CGG + Chr1:10182661-10182680 None:intergenic 65.0%
GCCTCCAACGCCTTCTCCGG+CGG - Chr1:10182642-10182661 MsG0180000718.01.T01:CDS 70.0%
TCCAACGCCTTCTCCGGCGG+CGG - Chr1:10182645-10182664 MsG0180000718.01.T01:CDS 70.0%
! TCCGCCGCCGGAGAAGGCGT+TGG + Chr1:10182649-10182668 None:intergenic 75.0%
!! GCCGCCGGAGAAGGCGTTGG+AGG + Chr1:10182646-10182665 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 10182409 10187615 10182409 ID=MsG0180000718.01;Name=MsG0180000718.01
Chr1 mRNA 10182409 10187615 10182409 ID=MsG0180000718.01.T01;Parent=MsG0180000718.01;Name=MsG0180000718.01.T01;_AED=0.38;_eAED=0.39;_QI=209|0.88|0.9|1|1|1|10|202|299
Chr1 exon 10187311 10187615 10187311 ID=MsG0180000718.01.T01:exon:6656;Parent=MsG0180000718.01.T01
Chr1 exon 10187106 10187216 10187106 ID=MsG0180000718.01.T01:exon:6657;Parent=MsG0180000718.01.T01
Chr1 exon 10186198 10186295 10186198 ID=MsG0180000718.01.T01:exon:6658;Parent=MsG0180000718.01.T01
Chr1 exon 10186043 10186084 10186043 ID=MsG0180000718.01.T01:exon:6659;Parent=MsG0180000718.01.T01
Chr1 exon 10185795 10185953 10185795 ID=MsG0180000718.01.T01:exon:6660;Parent=MsG0180000718.01.T01
Chr1 exon 10183759 10183834 10183759 ID=MsG0180000718.01.T01:exon:6661;Parent=MsG0180000718.01.T01
Chr1 exon 10183438 10183536 10183438 ID=MsG0180000718.01.T01:exon:6662;Parent=MsG0180000718.01.T01
Chr1 exon 10183285 10183364 10183285 ID=MsG0180000718.01.T01:exon:6663;Parent=MsG0180000718.01.T01
Chr1 exon 10182786 10182848 10182786 ID=MsG0180000718.01.T01:exon:6664;Parent=MsG0180000718.01.T01
Chr1 exon 10182409 10182686 10182409 ID=MsG0180000718.01.T01:exon:6665;Parent=MsG0180000718.01.T01
Chr1 five_prime_UTR 10187407 10187615 10187407 ID=MsG0180000718.01.T01:five_prime_utr;Parent=MsG0180000718.01.T01
Chr1 CDS 10187311 10187406 10187311 ID=MsG0180000718.01.T01:cds;Parent=MsG0180000718.01.T01
Chr1 CDS 10187106 10187216 10187106 ID=MsG0180000718.01.T01:cds;Parent=MsG0180000718.01.T01
Chr1 CDS 10186198 10186295 10186198 ID=MsG0180000718.01.T01:cds;Parent=MsG0180000718.01.T01
Chr1 CDS 10186043 10186084 10186043 ID=MsG0180000718.01.T01:cds;Parent=MsG0180000718.01.T01
Chr1 CDS 10185795 10185953 10185795 ID=MsG0180000718.01.T01:cds;Parent=MsG0180000718.01.T01
Chr1 CDS 10183759 10183834 10183759 ID=MsG0180000718.01.T01:cds;Parent=MsG0180000718.01.T01
Chr1 CDS 10183438 10183536 10183438 ID=MsG0180000718.01.T01:cds;Parent=MsG0180000718.01.T01
Chr1 CDS 10183285 10183364 10183285 ID=MsG0180000718.01.T01:cds;Parent=MsG0180000718.01.T01
Chr1 CDS 10182786 10182848 10182786 ID=MsG0180000718.01.T01:cds;Parent=MsG0180000718.01.T01
Chr1 CDS 10182611 10182686 10182611 ID=MsG0180000718.01.T01:cds;Parent=MsG0180000718.01.T01
Chr1 three_prime_UTR 10182409 10182610 10182409 ID=MsG0180000718.01.T01:three_prime_utr;Parent=MsG0180000718.01.T01
Gene Sequence

>MsG0180000718.01.T01

ATGTTCTCCAACTCCCAATTCGATGCCTCCAACGCCTTCTCCGGCGGCGGATTCATGTCCTCGCAACCCAACGATTCTTCTCCGGCACCGACTAAAAGTCGTGATTCTCAGGGTTTGATTCCGGTTACGGTGAAGCAGATAAGTGAAGCTTCTCATTCTGGCGATGAAAAGTCCAATTTCTCAATTAACGGTGTAGATCTGACTAATGTTACATTGGTTGGAATGGTGTATGAGAAAGTGGAGAGGAACACTGATGTTAATTTTGTCTTGGATGATGGAACTGGACGGATCAAATGCCGAAGATGGGTAAATGAGAGTTTTGACACAAAGGAAATGGAAGAAGTACTGAATGGCATGTATGTTCGTGTTTATGGGTCCTTGAAAAGCTTTCAAGGTGTAAGGCAACTTGTCGCCTTCTCTGTCAGGCATGTTTGCCATACCCATTTTGTTTATATTTTATTAAATATTCCATGTTGTTTATTTGCTTTCAGTTTGTTGCCTGCATGGCCCGTGACAAATTTTGATGAGATCCCGTTTCACTTTATCGACTGCATACATAACCACCTCCGCAGCAAACTAAAGATAGAAGGAATCACTTCTGCACTTCCTTCATCAAACTCGTCTATGAATACTCCTGTCAGAAATGTTTCAAATGGATCTCAGGCACCATCATCAAATCCGGGATATGTACAATATAGCACTGATGGACTCAAGGATATTGATAAATTGGTCCTTAACTATCTGCAGCAGCATTCAGACATAGATATGGGAGTACATGTTGATGAGTTATCAAGAGAGCTCAAGCTTCCAGTGGACAAGATCATGTTGTCGCTGAAGGCTACTTTAGAGGACGGTACGGTTTACTCCACCATAGATGATTCCCACTACAAACTTGCTTGA
Protein sequence

>MsG0180000718.01.T01

MFSNSQFDASNAFSGGGFMSSQPNDSSPAPTKSRDSQGLIPVTVKQISEASHSGDEKSNFSINGVDLTNVTLVGMVYEKVERNTDVNFVLDDGTGRIKCRRWVNESFDTKEMEEVLNGMYVRVYGSLKSFQGVRQLVAFSVRHVCHTHFVYILLNIPCCLFAFSLLPAWPVTNFDEIPFHFIDCIHNHLRSKLKIEGITSALPSSNSSMNTPVRNVSNGSQAPSSNPGYVQYSTDGLKDIDKLVLNYLQQHSDIDMGVHVDELSRELKLPVDKIMLSLKATLEDGTVYSTIDDSHYKLA*