AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048775.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048775.01.T01 MTR_5g015600 87.245 1176 77 6 90 1193 86 1260 0.0 2020
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048775.01.T01 AT1G64960 50.791 1138 506 8 102 1191 98 1229 0.0 1050
MsG0080048775.01.T01 AT1G64960 51.532 1110 511 8 102 1191 98 1200 0.0 1036

Find 60 sgRNAs with CRISPR-Local

Find 893 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTACAATCAAGGGCCATTT+TGG 0.186330 contig435end:-15215 MsG0080048775.01.T01:intergenic
AATTAAATCAAGCAAGTTAT+TGG 0.209359 contig435end:-15024 MsG0080048775.01.T01:intergenic
TGAAGTTACAATTTCCAAAA+TGG 0.266674 contig435end:+15201 MsG0080048775.01.T01:exon
TTCTTGGTTTGTTCACTTGT+TGG 0.284764 contig435end:+15386 MsG0080048775.01.T01:exon
AGGGGTTGCTTGAACCTCTT+TGG 0.288614 contig435end:+15597 MsG0080048775.01.T01:exon
TTGGCTGCCTGATGTAGTTT+TGG 0.290932 contig435end:+15109 MsG0080048775.01.T01:exon
TTGAATGTCGAGAATTTATC+TGG 0.295429 contig435end:-15293 MsG0080048775.01.T01:intergenic
TGTTTCAACTGAATCATGTT+TGG 0.303846 contig435end:+15046 MsG0080048775.01.T01:exon
TCTTGGTTTGTTCACTTGTT+GGG 0.323357 contig435end:+15387 MsG0080048775.01.T01:exon
CACTGCAGAGAGCACAGTTT+TGG 0.325243 contig435end:-15237 MsG0080048775.01.T01:intergenic
GTTTCAACTGAATCATGTTT+GGG 0.353872 contig435end:+15047 MsG0080048775.01.T01:exon
GAGAAATTGATGCATGTAAA+GGG 0.356739 contig435end:+15578 MsG0080048775.01.T01:exon
AAGGACTTTGAGCTGGCATT+AGG 0.391101 contig435end:+15419 MsG0080048775.01.T01:exon
TAAATGTTCACTTCCACTTT+CGG 0.391923 contig435end:-15162 MsG0080048775.01.T01:intergenic
CTCGACATTCAATAAACTTA+CGG 0.392019 contig435end:+15304 MsG0080048775.01.T01:exon
ACGTATCATCTATATGAAAC+TGG 0.400632 contig435end:+15620 MsG0080048775.01.T01:exon
AGTTGCATTGTAAAAGCATA+AGG 0.402121 contig435end:-15750 MsG0080048775.01.T01:intergenic
TGACATGATGTTATCTTCTC+TGG 0.402253 contig435end:+15496 MsG0080048775.01.T01:exon
TACTGCTGTTCTGAAGTTCA+TGG 0.407356 contig435end:+14749 MsG0080048775.01.T01:exon
AGAGTATAATGGATGCAGTT+GGG 0.410082 contig435end:+15357 MsG0080048775.01.T01:exon
TAATCGTGATGACAGGGATT+GGG 0.424973 contig435end:+15472 MsG0080048775.01.T01:exon
AGCTAGTAATAACGATGAAC+TGG 0.425908 contig435end:+15556 MsG0080048775.01.T01:exon
CAATAAACTTACGGCTATGC+TGG 0.453081 contig435end:+15313 MsG0080048775.01.T01:exon
ATATCTTGTCTTCATTGAAC+CGG 0.453751 contig435end:+14847 MsG0080048775.01.T01:exon
CAGAATTGAATTTGAGGAAG+AGG 0.455907 contig435end:+14881 MsG0080048775.01.T01:exon
GTAAAAGCATAAGGTACATC+AGG 0.460326 contig435end:-15741 MsG0080048775.01.T01:intergenic
CCCAGTGCCAAAACTACATC+AGG 0.461018 contig435end:-15116 MsG0080048775.01.T01:intergenic
ATCAGGCAGCCAAGGCTTTG+CGG 0.469242 contig435end:-15099 MsG0080048775.01.T01:intergenic
ACTTGTTGGGCTAGAACAAA+AGG 0.469593 contig435end:+15400 MsG0080048775.01.T01:exon
AGTTGTTTAATCGTGATGAC+AGG 0.474192 contig435end:+15465 MsG0080048775.01.T01:exon
TTGTTGCAGCCGCAAAGCCT+TGG 0.475384 contig435end:+15090 MsG0080048775.01.T01:exon
GTTCTACAACACACCGAAAG+TGG 0.479507 contig435end:+15149 MsG0080048775.01.T01:exon
GGAGAAATTGATGCATGTAA+AGG 0.487328 contig435end:+15577 MsG0080048775.01.T01:exon
TCATCACAGAATTGAATTTG+AGG 0.499129 contig435end:+14875 MsG0080048775.01.T01:exon
AAGAGTATAATGGATGCAGT+TGG 0.504894 contig435end:+15356 MsG0080048775.01.T01:exon
TTAATCGTGATGACAGGGAT+TGG 0.517973 contig435end:+15471 MsG0080048775.01.T01:exon
AAGGTACATCAGGTGTCTAA+AGG 0.520805 contig435end:-15731 MsG0080048775.01.T01:intergenic
AATGTGATACTGACTGATTC+CGG 0.528013 contig435end:+14963 MsG0080048775.01.T01:exon
GTCATCACGATTAAACAACT+TGG 0.532544 contig435end:-15462 MsG0080048775.01.T01:intergenic
ACCTCAACAAGTGCTTTGTA+AGG 0.535761 contig435end:+14716 MsG0080048775.01.T01:exon
GAGTATAATGGATGCAGTTG+GGG 0.538063 contig435end:+15358 MsG0080048775.01.T01:exon
CAAGTTATTGGCAAGAGTGA+AGG 0.539764 contig435end:-15012 MsG0080048775.01.T01:intergenic
CAATTCTGTGATGATACAGC+CGG 0.547592 contig435end:-14866 MsG0080048775.01.T01:intergenic
AATCGTGATGACAGGGATTG+GGG 0.550245 contig435end:+15473 MsG0080048775.01.T01:exon
GTGCTCTCTGCAGTGAATGA+AGG 0.573610 contig435end:+15245 MsG0080048775.01.T01:exon
AAAACTACATCAGGCAGCCA+AGG 0.582232 contig435end:-15107 MsG0080048775.01.T01:intergenic
AGAACAAAAGGACTTTGAGC+TGG 0.584523 contig435end:+15412 MsG0080048775.01.T01:exon
GTTGTTTAATCGTGATGACA+GGG 0.593151 contig435end:+15466 MsG0080048775.01.T01:exon
AAGAATAATCCATTGTTGTG+AGG 0.596859 contig435end:-14798 MsG0080048775.01.T01:intergenic
TGTCATTATGGAGGATCCAC+CGG 0.599171 contig435end:-14982 MsG0080048775.01.T01:intergenic
ACCTTACAAAGCACTTGTTG+AGG 0.600071 contig435end:-14717 MsG0080048775.01.T01:intergenic
AAATCTATCATAAGATAGAG+AGG 0.605785 contig435end:+15522 MsG0080048775.01.T01:exon
TCATCTATATGAAACTGGAA+AGG 0.612001 contig435end:+15625 MsG0080048775.01.T01:exon
TATAGATGATACGTCCAAAG+AGG 0.623631 contig435end:-15611 MsG0080048775.01.T01:intergenic
AGGAGCAAAACACATGGCAG+TGG 0.623835 contig435end:-14778 MsG0080048775.01.T01:intergenic
TCTGCAGTGAATGAAGGTGA+AGG 0.629597 contig435end:+15251 MsG0080048775.01.T01:exon
GTGAATGAAGGTGAAGGAGA+TGG 0.646473 contig435end:+15257 MsG0080048775.01.T01:exon
GTTGTGAGGAGCAAAACACA+TGG 0.711346 contig435end:-14784 MsG0080048775.01.T01:intergenic
GTGATACTGACTGATTCCGG+TGG 0.713602 contig435end:+14966 MsG0080048775.01.T01:exon
AGAAATTGATGCATGTAAAG+GGG 0.733317 contig435end:+15579 MsG0080048775.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAGAATTTCAAAA+CGG + contig435end:9903-9922 MsG0080048775.01.T01:intron 10.0%
!! AAAAGCAAATATAAATAAAA+AGG + contig435end:6791-6810 MsG0080048775.01.T01:intron 10.0%
!! AAATGTATATAAAAATATAG+AGG - contig435end:3386-3405 MsG0080048775.01.T01:intergenic 10.0%
!! ATCTTTATAACAAAAAATTA+AGG - contig435end:9041-9060 MsG0080048775.01.T01:intergenic 10.0%
!! CCTAAAAAATTATAATTTAT+AGG + contig435end:9144-9163 MsG0080048775.01.T01:intron 10.0%
!! GAACAAAAAAAATTAAAAAA+AGG - contig435end:5223-5242 MsG0080048775.01.T01:intergenic 10.0%
!! TAAAAAGTAAATAAAGTATA+TGG + contig435end:7692-7711 MsG0080048775.01.T01:intron 10.0%
!!! AAAAAGTTTTTTTTTTTAAG+AGG + contig435end:9483-9502 MsG0080048775.01.T01:intron 10.0%
!!! AAAATTTAAAATATCATCTA+TGG + contig435end:3262-3281 MsG0080048775.01.T01:intron 10.0%
!!! AAATTTAAAATATCATCTAT+GGG + contig435end:3263-3282 MsG0080048775.01.T01:intron 10.0%
!!! AACCTAATAATTTTTTTTTA+AGG - contig435end:9375-9394 MsG0080048775.01.T01:intergenic 10.0%
!!! AATTATAATTTTGTTCTAAA+AGG + contig435end:14314-14333 MsG0080048775.01.T01:intron 10.0%
!!! ACCTAATAATTTTTTTTTAA+GGG - contig435end:9374-9393 MsG0080048775.01.T01:intergenic 10.0%
!!! ATATACATCATTTTTTTATA+TGG - contig435end:5921-5940 MsG0080048775.01.T01:intergenic 10.0%
!!! CCTATAAATTATAATTTTTT+AGG - contig435end:9147-9166 MsG0080048775.01.T01:intergenic 10.0%
!!! GTTTTAATTTTTTTTATAGT+TGG + contig435end:9204-9223 MsG0080048775.01.T01:intron 10.0%
!!! GTTTTCTTTTTATAAAAAAA+AGG + contig435end:11445-11464 MsG0080048775.01.T01:intron 10.0%
!!! TATCTTTAAAATTAATACAT+TGG + contig435end:9182-9201 MsG0080048775.01.T01:intron 10.0%
!!! TTATTTAAAATTTTGAATGA+AGG - contig435end:7675-7694 MsG0080048775.01.T01:intergenic 10.0%
!! AAAAAAAGAGAATTTCAAAA+TGG + contig435end:9949-9968 MsG0080048775.01.T01:intron 15.0%
!! AATATTATAATCAAACACAA+TGG - contig435end:8095-8114 MsG0080048775.01.T01:intergenic 15.0%
!! ATTGATAGATTTATTTGTAT+CGG + contig435end:8694-8713 MsG0080048775.01.T01:intron 15.0%
!! GGTTAATTAAAAATTAGTAA+AGG - contig435end:5588-5607 MsG0080048775.01.T01:intergenic 15.0%
!! GTATAAAGACTTAATATTTA+GGG - contig435end:7792-7811 MsG0080048775.01.T01:intergenic 15.0%
!! GTTAGAAATTAATATACAAA+AGG + contig435end:7895-7914 MsG0080048775.01.T01:intron 15.0%
!! TAGGTTCAAAAAAAATTATT+AGG + contig435end:9389-9408 MsG0080048775.01.T01:intron 15.0%
!! TATACATATTGTAGTTATAA+TGG + contig435end:14189-14208 MsG0080048775.01.T01:intron 15.0%
!! TCAAACTAAGAAAATAATAT+AGG - contig435end:8354-8373 MsG0080048775.01.T01:intergenic 15.0%
!! TCCCTTAAAAAAAAATTATT+AGG + contig435end:9370-9389 MsG0080048775.01.T01:intron 15.0%
!! TGTATAAAGACTTAATATTT+AGG - contig435end:7793-7812 MsG0080048775.01.T01:intergenic 15.0%
!!! AATTATGTTTTGTTTGTATA+AGG - contig435end:4517-4536 MsG0080048775.01.T01:intergenic 15.0%
!!! AATTTTGAATATCATTTAGA+TGG - contig435end:12048-12067 MsG0080048775.01.T01:intergenic 15.0%
!!! AATTTTGATTTATTTTGGAT+GGG - contig435end:5660-5679 MsG0080048775.01.T01:intergenic 15.0%
!!! ATCACTTTTATGAAAATTTA+AGG - contig435end:11267-11286 MsG0080048775.01.T01:intergenic 15.0%
!!! ATGGGAAAATAATTTTAATA+GGG - contig435end:5642-5661 MsG0080048775.01.T01:intergenic 15.0%
!!! ATTGAATAAATTTGTTTGTA+AGG + contig435end:9115-9134 MsG0080048775.01.T01:intron 15.0%
!!! ATTTTGTAAATAGTCATTTA+TGG + contig435end:8841-8860 MsG0080048775.01.T01:intron 15.0%
!!! GAGATTTTAAAAGATTATTT+TGG - contig435end:3866-3885 MsG0080048775.01.T01:intergenic 15.0%
!!! TAAAAAGAATAAGAGTATAA+TGG + contig435end:15346-15365 MsG0080048775.01.T01:exon 15.0%
!!! TATGGTTTATAGTATTTTTT+GGG - contig435end:6393-6412 MsG0080048775.01.T01:intergenic 15.0%
!!! TGCAAGAATTTTTTTTTTTT+GGG - contig435end:8560-8579 MsG0080048775.01.T01:intergenic 15.0%
!!! TTAAAGATAAAATAGACTTT+TGG - contig435end:9171-9190 MsG0080048775.01.T01:intergenic 15.0%
!!! TTATGGTTTATAGTATTTTT+TGG - contig435end:6394-6413 MsG0080048775.01.T01:intergenic 15.0%
!!! TTCGATTTTTTATTTTTGTT+TGG - contig435end:4005-4024 MsG0080048775.01.T01:intergenic 15.0%
!! AAAAAAATTATGTGCTTTGA+AGG + contig435end:6238-6257 MsG0080048775.01.T01:intron 20.0%
!! AAAAATGTGTATGAGTAATT+CGG + contig435end:6499-6518 MsG0080048775.01.T01:intron 20.0%
!! AAAATCAAAATTCCACAAAA+AGG + contig435end:14094-14113 MsG0080048775.01.T01:intron 20.0%
!! AAATTATAATTTGACTGAGA+TGG - contig435end:14305-14324 MsG0080048775.01.T01:intergenic 20.0%
!! AATAGAAAATAAAAGAGAAG+GGG + contig435end:4815-4834 MsG0080048775.01.T01:intron 20.0%
!! AATCTCTCTATATGTTTATT+GGG - contig435end:3754-3773 MsG0080048775.01.T01:intergenic 20.0%
!! AATTAAATCAAGCAAGTTAT+TGG - contig435end:15027-15046 MsG0080048775.01.T01:intergenic 20.0%
!! ACAAGAACTTCTTAAAAAAA+GGG + contig435end:4046-4065 MsG0080048775.01.T01:intron 20.0%
!! AGAATAGAAAATAAAAGAGA+AGG + contig435end:4813-4832 MsG0080048775.01.T01:intron 20.0%
!! AGCTCAATATTTATTATTTG+AGG - contig435end:8611-8630 MsG0080048775.01.T01:intergenic 20.0%
!! ATATACGTAAAAAAAGTAAG+AGG + contig435end:7978-7997 MsG0080048775.01.T01:intron 20.0%
!! ATGTATAGTTGTGATTATAT+TGG - contig435end:9424-9443 MsG0080048775.01.T01:intergenic 20.0%
!! ATTTATGTTAGATACAACAT+AGG - contig435end:7306-7325 MsG0080048775.01.T01:intergenic 20.0%
!! CAAAATCAATTCATATATAG+AGG - contig435end:4152-4171 MsG0080048775.01.T01:intergenic 20.0%
!! CATGAAATGAAGTTAAATTA+AGG + contig435end:9459-9478 MsG0080048775.01.T01:intron 20.0%
!! CGTAAATTGTAATAAGTAAT+GGG + contig435end:11515-11534 MsG0080048775.01.T01:intron 20.0%
!! GAATAGAAAATAAAAGAGAA+GGG + contig435end:4814-4833 MsG0080048775.01.T01:intron 20.0%
!! GAATTAGTGAAAATTCATTT+CGG - contig435end:6535-6554 MsG0080048775.01.T01:intergenic 20.0%
!! GTTAAAGAAACTATTTAGAT+TGG - contig435end:5984-6003 MsG0080048775.01.T01:intergenic 20.0%
!! TAAAATGAAACAAGCAATTT+AGG - contig435end:13411-13430 MsG0080048775.01.T01:intergenic 20.0%
!! TAATCTCTCTATATGTTTAT+TGG - contig435end:3755-3774 MsG0080048775.01.T01:intergenic 20.0%
!! TACAAGAACTTCTTAAAAAA+AGG + contig435end:4045-4064 MsG0080048775.01.T01:intron 20.0%
!! TAGTCATTTATGGATAAAAT+TGG + contig435end:8851-8870 MsG0080048775.01.T01:intron 20.0%
!! TATACGTAAAAAAAGTAAGA+GGG + contig435end:7979-7998 MsG0080048775.01.T01:intron 20.0%
!! TCGTAAATTGTAATAAGTAA+TGG + contig435end:11514-11533 MsG0080048775.01.T01:intron 20.0%
!! TGTATAGTTGTGATTATATT+GGG - contig435end:9423-9442 MsG0080048775.01.T01:intergenic 20.0%
!! TTAAATACAAAGCATACTAA+GGG + contig435end:4561-4580 MsG0080048775.01.T01:intron 20.0%
!! TTACAAAAGTTGTTAGAAAA+TGG + contig435end:9644-9663 MsG0080048775.01.T01:intron 20.0%
!! TTATATTTGAAAACAGAAGA+TGG + contig435end:10765-10784 MsG0080048775.01.T01:CDS 20.0%
!! TTCCATAAAAAATGAAATTG+AGG - contig435end:5757-5776 MsG0080048775.01.T01:intergenic 20.0%
!! TTTAATAGTAGGAATAACAA+TGG + contig435end:9689-9708 MsG0080048775.01.T01:intron 20.0%
!! TTTGCATTATAATATTGATC+CGG - contig435end:9748-9767 MsG0080048775.01.T01:intergenic 20.0%
!!! AAAATAATTTTAATAGGGGA+TGG - contig435end:5637-5656 MsG0080048775.01.T01:intergenic 20.0%
!!! AAAGAAAATGCTTTTTGTTT+TGG + contig435end:11481-11500 MsG0080048775.01.T01:intron 20.0%
!!! AAATTATGAGAAATTTTGAG+TGG + contig435end:3176-3195 MsG0080048775.01.T01:intron 20.0%
!!! AATTATGAGAAATTTTGAGT+GGG + contig435end:3177-3196 MsG0080048775.01.T01:intron 20.0%
!!! AATTTCTTTTAGGATGAAAA+TGG + contig435end:5876-5895 MsG0080048775.01.T01:intron 20.0%
!!! ACATCATTTTTTTATATGGA+CGG - contig435end:5917-5936 MsG0080048775.01.T01:intergenic 20.0%
!!! ATAGATCTAGAATTTCTTTT+AGG + contig435end:5866-5885 MsG0080048775.01.T01:intron 20.0%
!!! ATTGATTTGATTCTGTTTTA+AGG + contig435end:5456-5475 MsG0080048775.01.T01:intron 20.0%
!!! ATTTAGTTTGCTTTTATCTT+AGG - contig435end:4228-4247 MsG0080048775.01.T01:intergenic 20.0%
!!! ATTTCTTTTAGGATGAAAAT+GGG + contig435end:5877-5896 MsG0080048775.01.T01:intron 20.0%
!!! CAAAACATATTTGTCTTTTA+TGG - contig435end:6411-6430 MsG0080048775.01.T01:intergenic 20.0%
!!! CAATAGTTTTTTGTTTGTAT+AGG - contig435end:3959-3978 MsG0080048775.01.T01:intergenic 20.0%
!!! CACATTTTTGTAAAATTTAC+AGG - contig435end:6488-6507 MsG0080048775.01.T01:intergenic 20.0%
!!! CTAAAGTAATTTTTAGCATT+CGG + contig435end:2751-2770 MsG0080048775.01.T01:intron 20.0%
!!! CTCAGAATTTTGATTTATTT+TGG - contig435end:5665-5684 MsG0080048775.01.T01:intergenic 20.0%
!!! CTGCAAGAATTTTTTTTTTT+TGG - contig435end:8561-8580 MsG0080048775.01.T01:intergenic 20.0%
!!! CTTAATTAATTTTCATGCAT+TGG + contig435end:8939-8958 MsG0080048775.01.T01:intron 20.0%
!!! GAAATGAATTTTCACTAATT+CGG + contig435end:6534-6553 MsG0080048775.01.T01:intron 20.0%
!!! GAATTTTGATTTATTTTGGA+TGG - contig435end:5661-5680 MsG0080048775.01.T01:intergenic 20.0%
!!! GATGGGAAAATAATTTTAAT+AGG - contig435end:5643-5662 MsG0080048775.01.T01:intergenic 20.0%
!!! GCAAGAATTTTTTTTTTTTG+GGG - contig435end:8559-8578 MsG0080048775.01.T01:intergenic 20.0%
!!! GGAAATTTTTTTCTAAATCT+AGG - contig435end:5313-5332 MsG0080048775.01.T01:intergenic 20.0%
!!! GTATAGTAGCTTTTTTATAT+GGG - contig435end:9337-9356 MsG0080048775.01.T01:intergenic 20.0%
!!! TAAAGTAATTTTTAGCATTC+GGG + contig435end:2752-2771 MsG0080048775.01.T01:intron 20.0%
!!! TACGTTATTTTTTTTTCTTC+TGG + contig435end:9307-9326 MsG0080048775.01.T01:intron 20.0%
!!! TCAAAATTTTCAGTTTAACA+AGG + contig435end:12060-12079 MsG0080048775.01.T01:CDS 20.0%
!!! TCATTTCTCTTTTTAATAGT+AGG + contig435end:9678-9697 MsG0080048775.01.T01:intron 20.0%
!!! TCTTCTGTTTTCAAATATAA+AGG - contig435end:10765-10784 MsG0080048775.01.T01:intergenic 20.0%
!!! TGGGAAAATAATTTTAATAG+GGG - contig435end:5641-5660 MsG0080048775.01.T01:intergenic 20.0%
!!! TGTATAGTAGCTTTTTTATA+TGG - contig435end:9338-9357 MsG0080048775.01.T01:intergenic 20.0%
!!! TTAAAATTTTGAATGAAGGA+TGG - contig435end:7671-7690 MsG0080048775.01.T01:intergenic 20.0%
!!! TTCAACTTCTTTTTTTCTTA+TGG + contig435end:13616-13635 MsG0080048775.01.T01:intron 20.0%
!!! TTCCTCAATTTCATTTTTTA+TGG + contig435end:5752-5771 MsG0080048775.01.T01:intron 20.0%
!!! TTCTAGATCTATTTCTTATT+AGG - contig435end:5858-5877 MsG0080048775.01.T01:intergenic 20.0%
!!! TTCTTTTCAATATTCTCTTT+GGG - contig435end:7176-7195 MsG0080048775.01.T01:intergenic 20.0%
!!! TTGATTTGATTCTGTTTTAA+GGG + contig435end:5457-5476 MsG0080048775.01.T01:intron 20.0%
!!! TTGTACATTTTCAAAATCTA+TGG - contig435end:10006-10025 MsG0080048775.01.T01:intergenic 20.0%
!!! TTGTCTAAATCTTTTTGTAT+AGG + contig435end:14678-14697 MsG0080048775.01.T01:intron 20.0%
!!! TTTAATTGAAAATTTTCCAG+AGG - contig435end:12892-12911 MsG0080048775.01.T01:intergenic 20.0%
!!! TTTATGTTTTTCATCTGATT+GGG - contig435end:10370-10389 MsG0080048775.01.T01:intergenic 20.0%
!!! TTTCAAGAAAAGGATATTTT+CGG + contig435end:6308-6327 MsG0080048775.01.T01:intron 20.0%
!!! TTTCTTTTCAATATTCTCTT+TGG - contig435end:7177-7196 MsG0080048775.01.T01:intergenic 20.0%
!!! TTTTATGTTTTTCATCTGAT+TGG - contig435end:10371-10390 MsG0080048775.01.T01:intergenic 20.0%
!!! TTTTCAAAATCTATGGTTTA+TGG - contig435end:9999-10018 MsG0080048775.01.T01:intergenic 20.0%
!!! TTTTGCTTTGTATATTAGAA+GGG + contig435end:11013-11032 MsG0080048775.01.T01:CDS 20.0%
!!! TTTTGTATGTGTTTATTTGT+AGG + contig435end:15685-15704 MsG0080048775.01.T01:exon 20.0%
!!! TTTTTCTCGATTTAAAAACA+TGG - contig435end:2836-2855 MsG0080048775.01.T01:intergenic 20.0%
!!! TTTTTTTAAACAGACTGTAT+TGG + contig435end:13928-13947 MsG0080048775.01.T01:intron 20.0%
! AAAAGAAAGAAGAGAAATAG+AGG + contig435end:7198-7217 MsG0080048775.01.T01:intron 25.0%
! AAAAGCTACTATACATGATT+AGG + contig435end:9343-9362 MsG0080048775.01.T01:intron 25.0%
! AAAAGGAATGAACAAAATTG+AGG + contig435end:6808-6827 MsG0080048775.01.T01:intron 25.0%
! AAAGAAAGAAGAGAAATAGA+GGG + contig435end:7199-7218 MsG0080048775.01.T01:intron 25.0%
! AAATAACGTAGAACCATATA+TGG - contig435end:9297-9316 MsG0080048775.01.T01:intergenic 25.0%
! AAATAGTTAGATGGGTAATT+GGG + contig435end:14348-14367 MsG0080048775.01.T01:intron 25.0%
! AAATCTATCATAAGATAGAG+AGG + contig435end:15522-15541 MsG0080048775.01.T01:exon 25.0%
! AAATTTAATGTGACAACGAT+AGG - contig435end:12814-12833 MsG0080048775.01.T01:intergenic 25.0%
! AAGAAAGAAAGAAAAAACAC+CGG + contig435end:9726-9745 MsG0080048775.01.T01:intron 25.0%
! AAGAATGGATCTTTGTAATT+AGG - contig435end:2954-2973 MsG0080048775.01.T01:intergenic 25.0%
! ACATATTTGTGTACATACAT+TGG + contig435end:8800-8819 MsG0080048775.01.T01:intron 25.0%
! ACATCAATTCATCAATACAA+TGG - contig435end:13905-13924 MsG0080048775.01.T01:intergenic 25.0%
! ACCTCTATAATTCGTAAAAA+TGG - contig435end:13497-13516 MsG0080048775.01.T01:intergenic 25.0%
! ACTATTTAGATTGGAGAATA+AGG - contig435end:5975-5994 MsG0080048775.01.T01:intergenic 25.0%
! ATAATCACAACTATACATGA+TGG + contig435end:9426-9445 MsG0080048775.01.T01:intron 25.0%
! ATAATGACTTGAAGATACAA+TGG - contig435end:14462-14481 MsG0080048775.01.T01:intergenic 25.0%
! ATACGTAAAAAAAGTAAGAG+GGG + contig435end:7980-7999 MsG0080048775.01.T01:intron 25.0%
! ATAGAAAATAAAAGAGAAGG+GGG + contig435end:4816-4835 MsG0080048775.01.T01:intron 25.0%
! ATCGTTGTCACATTAAATTT+GGG + contig435end:12814-12833 MsG0080048775.01.T01:CDS 25.0%
! ATCTCTCTATATGTTTATTG+GGG - contig435end:3753-3772 MsG0080048775.01.T01:intergenic 25.0%
! ATTAGCAAGTACATTAGATA+CGG - contig435end:12114-12133 MsG0080048775.01.T01:intergenic 25.0%
! ATTGATATAGAGAAAAGTCT+AGG - contig435end:6204-6223 MsG0080048775.01.T01:intergenic 25.0%
! CTAATATAATCAATTCTCAC+TGG + contig435end:12129-12148 MsG0080048775.01.T01:intron 25.0%
! CTATTTAGATTGGAGAATAA+GGG - contig435end:5974-5993 MsG0080048775.01.T01:intergenic 25.0%
! CTTAAATACAAAGCATACTA+AGG + contig435end:4560-4579 MsG0080048775.01.T01:intron 25.0%
! GAAAAATCAAAAACCTTTCT+CGG - contig435end:10447-10466 MsG0080048775.01.T01:intergenic 25.0%
! GTAGTATATATAGGTTGTAT+CGG + contig435end:4968-4987 MsG0080048775.01.T01:intron 25.0%
! GTCTGTATAAATAGTTAGAT+GGG + contig435end:14340-14359 MsG0080048775.01.T01:intron 25.0%
! TAAATAGTTAGATGGGTAAT+TGG + contig435end:14347-14366 MsG0080048775.01.T01:intron 25.0%
! TAAATGAGATAGAAGAGAAA+AGG + contig435end:3319-3338 MsG0080048775.01.T01:intron 25.0%
! TAATATAGAGGTTGTGAAAA+GGG + contig435end:6115-6134 MsG0080048775.01.T01:intron 25.0%
! TAATTAAGAGCAGTAACAAA+TGG - contig435end:8927-8946 MsG0080048775.01.T01:intergenic 25.0%
! TAATTTCCCAAAATAGATGA+AGG - contig435end:11808-11827 MsG0080048775.01.T01:intergenic 25.0%
! TAGAAATGCTTATGCATATA+TGG + contig435end:3571-3590 MsG0080048775.01.T01:intron 25.0%
! TATCGTTGTCACATTAAATT+TGG + contig435end:12813-12832 MsG0080048775.01.T01:CDS 25.0%
! TATTTAGATTGGAGAATAAG+GGG - contig435end:5973-5992 MsG0080048775.01.T01:intergenic 25.0%
! TATTTGACTAAAACCAACAA+TGG - contig435end:9801-9820 MsG0080048775.01.T01:intergenic 25.0%
! TCAAAAAAAATGTGTGAAAG+TGG + contig435end:7330-7349 MsG0080048775.01.T01:intron 25.0%
! TCCAAAAAAAGAAGAAAACA+GGG + contig435end:14070-14089 MsG0080048775.01.T01:intron 25.0%
! TGAAGTTACAATTTCCAAAA+TGG + contig435end:15201-15220 MsG0080048775.01.T01:exon 25.0%
! TGTATCTTCAAGTCATTATT+AGG + contig435end:14463-14482 MsG0080048775.01.T01:intron 25.0%
! TGTCTGTATAAATAGTTAGA+TGG + contig435end:14339-14358 MsG0080048775.01.T01:intron 25.0%
! TGTTGTATCTAACATAAATC+TGG + contig435end:7307-7326 MsG0080048775.01.T01:intron 25.0%
! TTAAAAACATGGATACAAGA+CGG - contig435end:2825-2844 MsG0080048775.01.T01:intergenic 25.0%
! TTAAAATATCATCTATGGGA+AGG + contig435end:3267-3286 MsG0080048775.01.T01:intron 25.0%
! TTAAGATTATCATGCATACA+AGG - contig435end:11345-11364 MsG0080048775.01.T01:intergenic 25.0%
! TTAATATAGAGGTTGTGAAA+AGG + contig435end:6114-6133 MsG0080048775.01.T01:intron 25.0%
! TTCCAAAAAAAGAAGAAAAC+AGG + contig435end:14069-14088 MsG0080048775.01.T01:intron 25.0%
! TTCCTAATCAATACACAATA+AGG + contig435end:6017-6036 MsG0080048775.01.T01:intron 25.0%
! TTCGGTTTAGTAGTATATAT+AGG + contig435end:4959-4978 MsG0080048775.01.T01:intron 25.0%
! TTCTCTTCTTATCAAATGTT+AGG - contig435end:9832-9851 MsG0080048775.01.T01:intergenic 25.0%
! TTCTTTCTTTCTTTACTCAT+TGG - contig435end:9719-9738 MsG0080048775.01.T01:intergenic 25.0%
!! AGTTAATCGGTTTAATATAG+AGG + contig435end:6103-6122 MsG0080048775.01.T01:intron 25.0%
!! ATATAAGTTTTCCTGGATTT+TGG + contig435end:13712-13731 MsG0080048775.01.T01:intron 25.0%
!! ATCTTTGTTATAATTGGTGA+CGG - contig435end:11833-11852 MsG0080048775.01.T01:intergenic 25.0%
!! ATGACTAATATAAGTTTTCC+TGG + contig435end:13705-13724 MsG0080048775.01.T01:intron 25.0%
!! ATTTGAAACTGTTGTTAAAC+AGG + contig435end:10727-10746 MsG0080048775.01.T01:CDS 25.0%
!! ATTTGATTTAACCATGTGTT+TGG + contig435end:14557-14576 MsG0080048775.01.T01:intron 25.0%
!! CAGATTTAAAATTATCCCAA+GGG + contig435end:7087-7106 MsG0080048775.01.T01:intron 25.0%
!! CTCTATTATTGTTATTGAGA+CGG - contig435end:8731-8750 MsG0080048775.01.T01:intergenic 25.0%
!! CTTTACCTTCTTTTCAATAT+AGG + contig435end:11595-11614 MsG0080048775.01.T01:intron 25.0%
!! CTTTTGCTTTGTATATTAGA+AGG + contig435end:11012-11031 MsG0080048775.01.T01:CDS 25.0%
!! GACAATAATACTTTTCAAAG+GGG - contig435end:7770-7789 MsG0080048775.01.T01:intergenic 25.0%
!! GCATGATAATTTGATTGTTT+TGG + contig435end:10494-10513 MsG0080048775.01.T01:CDS 25.0%
!! GGACAATAATACTTTTCAAA+GGG - contig435end:7771-7790 MsG0080048775.01.T01:intergenic 25.0%
!! GTAAGCATCTTTGTTATAAT+TGG - contig435end:11839-11858 MsG0080048775.01.T01:intergenic 25.0%
!! TATTTATTATTTGAGGTAGC+TGG - contig435end:8604-8623 MsG0080048775.01.T01:intergenic 25.0%
!! TCTATTATTGTTATTGAGAC+GGG - contig435end:8730-8749 MsG0080048775.01.T01:intergenic 25.0%
!! TCTTTTCAATATTCTCTTTG+GGG - contig435end:7175-7194 MsG0080048775.01.T01:intergenic 25.0%
!! TTCAACAACTGAATTTGTTT+GGG - contig435end:8636-8655 MsG0080048775.01.T01:intergenic 25.0%
!! TTGTATATTAGAAGGGTTTT+GGG + contig435end:11020-11039 MsG0080048775.01.T01:CDS 25.0%
!! TTTCAACAACTGAATTTGTT+TGG - contig435end:8637-8656 MsG0080048775.01.T01:intergenic 25.0%
!! TTTGTATATTAGAAGGGTTT+TGG + contig435end:11019-11038 MsG0080048775.01.T01:CDS 25.0%
!! TTTTTACGAATTATAGAGGT+CGG + contig435end:13497-13516 MsG0080048775.01.T01:intron 25.0%
!!! AAAGTAATTTTTAGCATTCG+GGG + contig435end:2753-2772 MsG0080048775.01.T01:intron 25.0%
!!! AATTTCCATCATTTTTCGTA+AGG - contig435end:5950-5969 MsG0080048775.01.T01:intergenic 25.0%
!!! ACCATTTTTACGAATTATAG+AGG + contig435end:13493-13512 MsG0080048775.01.T01:intron 25.0%
!!! AGAAAAAGTAGATTTTGACA+CGG + contig435end:9563-9582 MsG0080048775.01.T01:intron 25.0%
!!! CGTTTTGTACATAGTTTTAT+TGG + contig435end:13259-13278 MsG0080048775.01.T01:intron 25.0%
!!! CTACTTATTTTCTCCTTTTT+GGG + contig435end:6910-6929 MsG0080048775.01.T01:intron 25.0%
!!! GAAATTGTTTGTTGATAGTT+TGG + contig435end:5497-5516 MsG0080048775.01.T01:intron 25.0%
!!! GGTGATTCTATTGATTTTAT+GGG - contig435end:3810-3829 MsG0080048775.01.T01:intergenic 25.0%
!!! TAATTTGATTGTTTTGGAAG+CGG + contig435end:10500-10519 MsG0080048775.01.T01:CDS 25.0%
!!! TACTTATTTTCTCCTTTTTG+GGG + contig435end:6911-6930 MsG0080048775.01.T01:intron 25.0%
!!! TAGAGATACATTTTGACTTA+GGG - contig435end:3902-3921 MsG0080048775.01.T01:intergenic 25.0%
!!! TAGATTTATTTGTATCGGTT+TGG + contig435end:8699-8718 MsG0080048775.01.T01:intron 25.0%
!!! TCTACTTATTTTCTCCTTTT+TGG + contig435end:6909-6928 MsG0080048775.01.T01:intron 25.0%
!!! TCTAGTTCTATTTTGAATTC+TGG + contig435end:14401-14420 MsG0080048775.01.T01:intron 25.0%
!!! TTAGAGATACATTTTGACTT+AGG - contig435end:3903-3922 MsG0080048775.01.T01:intergenic 25.0%
!!! TTTTTTCCCTTGAAATATTC+AGG + contig435end:13800-13819 MsG0080048775.01.T01:intron 25.0%
AAAAAGTGAACAATCTTCGT+GGG + contig435end:6935-6954 MsG0080048775.01.T01:intron 30.0%
AAAAGAATGGTGATTCCAAA+GGG + contig435end:13186-13205 MsG0080048775.01.T01:CDS 30.0%
AAAAGTGGAAGGAAGTTTAA+AGG - contig435end:9273-9292 MsG0080048775.01.T01:intergenic 30.0%
AAAATACATCATCAACCCTT+GGG + contig435end:6985-7004 MsG0080048775.01.T01:CDS 30.0%
AAACACAGTAAAATGTATGC+TGG - contig435end:11160-11179 MsG0080048775.01.T01:intergenic 30.0%
AAAGTAAGAGGGGTTATAAA+AGG + contig435end:7990-8009 MsG0080048775.01.T01:intron 30.0%
AAATGAAAACAGATAGATGC+CGG - contig435end:14541-14560 MsG0080048775.01.T01:intergenic 30.0%
AACACAGTAAAATGTATGCT+GGG - contig435end:11159-11178 MsG0080048775.01.T01:intergenic 30.0%
AACGAGAAAATGAAGAAGTA+TGG - contig435end:3112-3131 MsG0080048775.01.T01:intergenic 30.0%
AACTGCTTGGAAAAACTATT+TGG + contig435end:13974-13993 MsG0080048775.01.T01:intron 30.0%
AAGAAGAAAATGATGCAGAT+TGG + contig435end:4866-4885 MsG0080048775.01.T01:intron 30.0%
AAGAATAATCCATTGTTGTG+AGG - contig435end:14801-14820 MsG0080048775.01.T01:intergenic 30.0%
AAGTTGAGCTCTCTTAAATT+TGG + contig435end:11422-11441 MsG0080048775.01.T01:intron 30.0%
AATGCTCGAAACAAACAAAA+AGG + contig435end:4328-4347 MsG0080048775.01.T01:intron 30.0%
AATTGACGTGAAATTATAGC+AGG - contig435end:13683-13702 MsG0080048775.01.T01:intergenic 30.0%
ACATTATAACATTGCCCTAT+GGG - contig435end:2600-2619 MsG0080048775.01.T01:intergenic 30.0%
ACGTATCATCTATATGAAAC+TGG + contig435end:15620-15639 MsG0080048775.01.T01:exon 30.0%
ACTTTACAAAACACCATTGT+TGG + contig435end:9785-9804 MsG0080048775.01.T01:intron 30.0%
AGAAAAGGACGTATTTGTTT+GGG + contig435end:3334-3353 MsG0080048775.01.T01:intron 30.0%
AGAAATTGATGCATGTAAAG+GGG + contig435end:15579-15598 MsG0080048775.01.T01:exon 30.0%
AGAACCATATATGGAAAAAG+TGG - contig435end:9288-9307 MsG0080048775.01.T01:intergenic 30.0%
AGGAAAAAATCTAAATCCTC+TGG + contig435end:12873-12892 MsG0080048775.01.T01:CDS 30.0%
AGGGTTTGATTGAATGAATT+AGG - contig435end:10174-10193 MsG0080048775.01.T01:intergenic 30.0%
AGTTGAGCTCTCTTAAATTT+GGG + contig435end:11423-11442 MsG0080048775.01.T01:intron 30.0%
ATACTTGCAAAATATTGCAC+CGG - contig435end:12346-12365 MsG0080048775.01.T01:intergenic 30.0%
ATATCTTGTCTTCATTGAAC+CGG + contig435end:14847-14866 MsG0080048775.01.T01:exon 30.0%
ATATGGAAAATCTCAGTTAG+CGG + contig435end:7709-7728 MsG0080048775.01.T01:intron 30.0%
ATGTTTGTGCAACATTAGAT+TGG + contig435end:11240-11259 MsG0080048775.01.T01:intron 30.0%
ATTCTTAACCTTCAAAATCG+TGG + contig435end:3030-3049 MsG0080048775.01.T01:intron 30.0%
ATTCTTCTACAAACAAGAGT+AGG + contig435end:2968-2987 MsG0080048775.01.T01:intron 30.0%
CAAAATATCACTCCAAAAAG+AGG - contig435end:6159-6178 MsG0080048775.01.T01:intergenic 30.0%
CAATATCATAACAATCATGC+CGG - contig435end:13829-13848 MsG0080048775.01.T01:intergenic 30.0%
CAATTCATCAATACAATGGA+AGG - contig435end:13901-13920 MsG0080048775.01.T01:intergenic 30.0%
CAGATTTAAATTTAGCCCAA+GGG - contig435end:7003-7022 MsG0080048775.01.T01:intergenic 30.0%
CGACCTAAAATACATTCTAA+GGG + contig435end:4676-4695 MsG0080048775.01.T01:intron 30.0%
CTAATCAATACACAATAAGG+TGG + contig435end:6020-6039 MsG0080048775.01.T01:intron 30.0%
CTAATCCACACTATAAAATC+CGG + contig435end:14519-14538 MsG0080048775.01.T01:intron 30.0%
CTCGACATTCAATAAACTTA+CGG + contig435end:15304-15323 MsG0080048775.01.T01:exon 30.0%
CTTTAATTCTGCATGTTGAA+TGG - contig435end:4176-4195 MsG0080048775.01.T01:intergenic 30.0%
CTTTCACCAAAAATTCACAA+TGG + contig435end:10051-10070 MsG0080048775.01.T01:intron 30.0%
GAACAGCTAGTAATTTCATT+GGG + contig435end:5611-5630 MsG0080048775.01.T01:intron 30.0%
GAATCAAATCAATCCCAAAT+CGG - contig435end:5449-5468 MsG0080048775.01.T01:intergenic 30.0%
GAATGCAAAACAAAATCACA+AGG - contig435end:13553-13572 MsG0080048775.01.T01:intergenic 30.0%
GAGAAATTGATGCATGTAAA+GGG + contig435end:15578-15597 MsG0080048775.01.T01:exon 30.0%
GATAATATTCTTCAGCTGTT+GGG - contig435end:4126-4145 MsG0080048775.01.T01:intergenic 30.0%
GATGATTATTTAGTAGCTGT+AGG + contig435end:12945-12964 MsG0080048775.01.T01:CDS 30.0%
GGGTATTTATAGGTAGAAAT+GGG + contig435end:7278-7297 MsG0080048775.01.T01:intron 30.0%
GGGTTTGATTGAATGAATTA+GGG - contig435end:10173-10192 MsG0080048775.01.T01:intergenic 30.0%
GTTGACATTGAAGAAAAAAG+TGG + contig435end:10635-10654 MsG0080048775.01.T01:CDS 30.0%
GTTTCAACTGAATCATGTTT+GGG + contig435end:15047-15066 MsG0080048775.01.T01:exon 30.0%
GTTTCATTTGTGAAGGAATA+TGG + contig435end:14487-14506 MsG0080048775.01.T01:intron 30.0%
TAAAAAGTGAACAATCTTCG+TGG + contig435end:6934-6953 MsG0080048775.01.T01:intron 30.0%
TAAAACGAGTAGATGAACTA+TGG + contig435end:3657-3676 MsG0080048775.01.T01:intron 30.0%
TAAAACTCATCTTATGGAAC+TGG + contig435end:12386-12405 MsG0080048775.01.T01:CDS 30.0%
TAAATGTTCACTTCCACTTT+CGG - contig435end:15165-15184 MsG0080048775.01.T01:intergenic 30.0%
TAAGTGATGCATTGAGTAAA+AGG - contig435end:13588-13607 MsG0080048775.01.T01:intergenic 30.0%
TACAAACAAGAGTAGGAAAT+GGG + contig435end:2975-2994 MsG0080048775.01.T01:intron 30.0%
TACATTATAACATTGCCCTA+TGG - contig435end:2601-2620 MsG0080048775.01.T01:intergenic 30.0%
TAGAAAATAAAAGAGAAGGG+GGG + contig435end:4817-4836 MsG0080048775.01.T01:intron 30.0%
TATATACTACTAAACCGAAC+CGG - contig435end:4958-4977 MsG0080048775.01.T01:intergenic 30.0%
TCAAAGAGCAAACATACTAT+AGG + contig435end:5561-5580 MsG0080048775.01.T01:intron 30.0%
TCATCACAGAATTGAATTTG+AGG + contig435end:14875-14894 MsG0080048775.01.T01:exon 30.0%
TCATCTATATGAAACTGGAA+AGG + contig435end:15625-15644 MsG0080048775.01.T01:exon 30.0%
TCGACCTAAAATACATTCTA+AGG + contig435end:4675-4694 MsG0080048775.01.T01:intron 30.0%
TCGTTGTCACATTAAATTTG+GGG + contig435end:12815-12834 MsG0080048775.01.T01:CDS 30.0%
TGAAATTACTAGCTGTTCAT+AGG - contig435end:5609-5628 MsG0080048775.01.T01:intergenic 30.0%
TGAACAGCTAGTAATTTCAT+TGG + contig435end:5610-5629 MsG0080048775.01.T01:intron 30.0%
TGATAATATTCTTCAGCTGT+TGG - contig435end:4127-4146 MsG0080048775.01.T01:intergenic 30.0%
TGTTTCAACTGAATCATGTT+TGG + contig435end:15046-15065 MsG0080048775.01.T01:exon 30.0%
TTAGCAAGTACATTAGATAC+GGG - contig435end:12113-12132 MsG0080048775.01.T01:intergenic 30.0%
TTCTTCTACATTACTTTCAG+AGG + contig435end:13226-13245 MsG0080048775.01.T01:CDS 30.0%
TTGAATGTCGAGAATTTATC+TGG - contig435end:15296-15315 MsG0080048775.01.T01:intergenic 30.0%
TTGAGACTATATGTGAAGAA+TGG + contig435end:10544-10563 MsG0080048775.01.T01:CDS 30.0%
! AACAAACGTTTTTCCAACTT+TGG - contig435end:7390-7409 MsG0080048775.01.T01:intergenic 30.0%
! AGAGGATTTAGAGGATTTTA+GGG - contig435end:10143-10162 MsG0080048775.01.T01:intergenic 30.0%
! AGTGCATATTAAGTTGTGTA+GGG + contig435end:7538-7557 MsG0080048775.01.T01:CDS 30.0%
! AGTTGCATTGTAAAAGCATA+AGG - contig435end:15753-15772 MsG0080048775.01.T01:intergenic 30.0%
! ATTTAAAATTATCCCAAGGG+TGG + contig435end:7090-7109 MsG0080048775.01.T01:intron 30.0%
! CATCTTTTGTTCAGTTTCAT+TGG + contig435end:13742-13761 MsG0080048775.01.T01:intron 30.0%
! CTTTTAAACTGCAATATCGT+TGG - contig435end:6276-6295 MsG0080048775.01.T01:intergenic 30.0%
! CTTTTCAATATTCTCTTTGG+GGG - contig435end:7174-7193 MsG0080048775.01.T01:intergenic 30.0%
! GATATGTTGTATGCATTTTG+AGG - contig435end:14832-14851 MsG0080048775.01.T01:intergenic 30.0%
! GCAGATTTAAAATTATCCCA+AGG + contig435end:7086-7105 MsG0080048775.01.T01:intron 30.0%
! GGGACAATAATACTTTTCAA+AGG - contig435end:7772-7791 MsG0080048775.01.T01:intergenic 30.0%
! TACTCTTGTTTGTAGAAGAA+TGG - contig435end:2969-2988 MsG0080048775.01.T01:intergenic 30.0%
! TAGCCCTTAGAATGTATTTT+AGG - contig435end:4682-4701 MsG0080048775.01.T01:intergenic 30.0%
! TAGTGCATATTAAGTTGTGT+AGG + contig435end:7537-7556 MsG0080048775.01.T01:CDS 30.0%
! TCAACAACTGAATTTGTTTG+GGG - contig435end:8635-8654 MsG0080048775.01.T01:intergenic 30.0%
! TCCCTGTTTTCTTCTTTTTT+TGG - contig435end:14074-14093 MsG0080048775.01.T01:intergenic 30.0%
! TCTTCTCCATTGTGAATTTT+TGG - contig435end:10060-10079 MsG0080048775.01.T01:intergenic 30.0%
! TGACTTAGAGTATGTTTTCT+GGG - contig435end:4448-4467 MsG0080048775.01.T01:intergenic 30.0%
! TTCTTACTGATTGAGTGAAA+TGG + contig435end:2693-2712 MsG0080048775.01.T01:intron 30.0%
! TTGACTTAGAGTATGTTTTC+TGG - contig435end:4449-4468 MsG0080048775.01.T01:intergenic 30.0%
! TTGATCGCCAATCTAAAATT+AGG + contig435end:12709-12728 MsG0080048775.01.T01:CDS 30.0%
! TTTAAAATTCATCTACCCTC+TGG + contig435end:13293-13312 MsG0080048775.01.T01:intron 30.0%
!! AAACTAAAGTGTTGTATGCA+GGG - contig435end:4289-4308 MsG0080048775.01.T01:intergenic 30.0%
!! AATCTTAGTTTTCTTCCCTT+TGG - contig435end:13204-13223 MsG0080048775.01.T01:intergenic 30.0%
!! ACATAAGTTGTTGCTTTCTT+TGG + contig435end:12737-12756 MsG0080048775.01.T01:CDS 30.0%
!! CACCTTATTGTGTATTGATT+AGG - contig435end:6022-6041 MsG0080048775.01.T01:intergenic 30.0%
!! CATAAGTTGTTGCTTTCTTT+GGG + contig435end:12738-12757 MsG0080048775.01.T01:CDS 30.0%
!! CGATTTTGAAGGTTAAGAAT+AGG - contig435end:3030-3049 MsG0080048775.01.T01:intergenic 30.0%
!! CTGCAGATTTTAAAAGACTT+GGG - contig435end:3832-3851 MsG0080048775.01.T01:intergenic 30.0%
!! GACTTTCAAGTTTCAAGAAA+AGG + contig435end:6298-6317 MsG0080048775.01.T01:intron 30.0%
!! GTGTTATTTGAACAACCATT+TGG + contig435end:9507-9526 MsG0080048775.01.T01:intron 30.0%
!! TGCAGATTTTAAAAGACTTG+GGG - contig435end:3831-3850 MsG0080048775.01.T01:intergenic 30.0%
!! TTGCTTGTTTCATTTTAACG+TGG + contig435end:13414-13433 MsG0080048775.01.T01:intron 30.0%
!! TTGGTTGATTTTCAATTGTC+TGG + contig435end:13761-13780 MsG0080048775.01.T01:intron 30.0%
!!! AAGTTTCTGGCTTTTTTGTT+TGG + contig435end:10792-10811 MsG0080048775.01.T01:CDS 30.0%
!!! AGAGATACATTTTGACTTAG+GGG - contig435end:3901-3920 MsG0080048775.01.T01:intergenic 30.0%
!!! AGTTTCTGGCTTTTTTGTTT+GGG + contig435end:10793-10812 MsG0080048775.01.T01:CDS 30.0%
!!! CTCTTTTTGGAGTGATATTT+TGG + contig435end:6157-6176 MsG0080048775.01.T01:intron 30.0%
!!! GGGTGATTCTATTGATTTTA+TGG - contig435end:3811-3830 MsG0080048775.01.T01:intergenic 30.0%
!!! TGCTTTTTGTTTTGGATTAG+CGG + contig435end:11489-11508 MsG0080048775.01.T01:intron 30.0%
!!! TTCATGCATTGGTTAGTTTT+TGG + contig435end:8950-8969 MsG0080048775.01.T01:intron 30.0%
!!! TTTAGAGGATTTTAGGGTTA+AGG - contig435end:10137-10156 MsG0080048775.01.T01:intergenic 30.0%
!!! TTTTGGAGTGATATTTTGGT+GGG + contig435end:6161-6180 MsG0080048775.01.T01:intron 30.0%
!!! TTTTTGGAGTGATATTTTGG+TGG + contig435end:6160-6179 MsG0080048775.01.T01:intron 30.0%
AAAACCAACACTCAAGAGAA+AGG - contig435end:3135-3154 MsG0080048775.01.T01:intergenic 35.0%
AAAAGGACGTATTTGTTTGG+GGG + contig435end:3336-3355 MsG0080048775.01.T01:intron 35.0%
AAAAGTGAACAATCTTCGTG+GGG + contig435end:6936-6955 MsG0080048775.01.T01:intron 35.0%
AAAAGTGATCAAACTTCGTC+GGG - contig435end:7150-7169 MsG0080048775.01.T01:intergenic 35.0%
AAAATAGTGAGTAGCCGATT+TGG - contig435end:7125-7144 MsG0080048775.01.T01:intergenic 35.0%
AAAATTCCACAAAAAGGCGA+AGG + contig435end:14100-14119 MsG0080048775.01.T01:intron 35.0%
AAACTAGCACAGTGCAAATT+GGG - contig435end:13459-13478 MsG0080048775.01.T01:intergenic 35.0%
AAAGCCGAATAAGGTAGAAA+AGG - contig435end:5336-5355 MsG0080048775.01.T01:intergenic 35.0%
AAAGTGGAAGGTTTACTAAC+TGG + contig435end:12558-12577 MsG0080048775.01.T01:CDS 35.0%
AACAAAAAGAGCCAAACACA+TGG - contig435end:14571-14590 MsG0080048775.01.T01:intergenic 35.0%
AACGATCTCGATAGAACAAA+AGG - contig435end:10618-10637 MsG0080048775.01.T01:intergenic 35.0%
AACTTGATCATTTCCTACTC+TGG - contig435end:3060-3079 MsG0080048775.01.T01:intergenic 35.0%
AAGCCGAATAAGGTAGAAAA+GGG - contig435end:5335-5354 MsG0080048775.01.T01:intergenic 35.0%
AAGCTTACAACATAGCATCA+CGG - contig435end:11296-11315 MsG0080048775.01.T01:intergenic 35.0%
AAGTGGAAGGTTTACTAACT+GGG + contig435end:12559-12578 MsG0080048775.01.T01:CDS 35.0%
AATGTAGAAGAGAGAGATTG+AGG + contig435end:2615-2634 MsG0080048775.01.T01:exon 35.0%
AATTCTGCTCTTTACCCAAA+CGG - contig435end:7598-7617 MsG0080048775.01.T01:intergenic 35.0%
ACAATAGGTTGTCAACCAAA+TGG - contig435end:9525-9544 MsG0080048775.01.T01:intergenic 35.0%
ACAGCAATTGTTCTAACTTC+TGG - contig435end:11767-11786 MsG0080048775.01.T01:intergenic 35.0%
ACAGTGTTACAGCTACTAAA+AGG + contig435end:12853-12872 MsG0080048775.01.T01:CDS 35.0%
ACTAGTAAAAAGGTCTCCAA+TGG + contig435end:12320-12339 MsG0080048775.01.T01:CDS 35.0%
AGAAAAAAGTGGATGTGCAT+AGG + contig435end:10646-10665 MsG0080048775.01.T01:CDS 35.0%
AGAAAAGTCTAGGAAAACAG+CGG - contig435end:6194-6213 MsG0080048775.01.T01:intergenic 35.0%
AGAAGATGGAAGAAAGTTTC+TGG + contig435end:10779-10798 MsG0080048775.01.T01:CDS 35.0%
AGACTATATGTGAAGAATGG+TGG + contig435end:10547-10566 MsG0080048775.01.T01:CDS 35.0%
AGATCTAAAGATTGCTTTCC+TGG - contig435end:13012-13031 MsG0080048775.01.T01:intergenic 35.0%
AGCTAGGAAAAAATTTACGC+AGG - contig435end:9232-9251 MsG0080048775.01.T01:intergenic 35.0%
AGCTAGTAATAACGATGAAC+TGG + contig435end:15556-15575 MsG0080048775.01.T01:exon 35.0%
AGCTCAACTTGATTATAAGC+TGG - contig435end:11412-11431 MsG0080048775.01.T01:intergenic 35.0%
AGGGGTTATAAAAGGATGAA+GGG + contig435end:7998-8017 MsG0080048775.01.T01:intron 35.0%
AGTTGTTTAATCGTGATGAC+AGG + contig435end:15465-15484 MsG0080048775.01.T01:exon 35.0%
ATAACTTGGAGTCAACAACT+GGG + contig435end:14035-14054 MsG0080048775.01.T01:intron 35.0%
ATCAATACACAATAAGGTGG+TGG + contig435end:6023-6042 MsG0080048775.01.T01:intron 35.0%
ATCAGTGATAGGAGAAAGAA+AGG + contig435end:3210-3229 MsG0080048775.01.T01:intron 35.0%
ATGTAGAAGAGAGAGATTGA+GGG + contig435end:2616-2635 MsG0080048775.01.T01:exon 35.0%
ATGTATGTTTGAGCTTGTGT+TGG + contig435end:5416-5435 MsG0080048775.01.T01:intron 35.0%
ATTAGGCGTTTCATTTGTGA+AGG + contig435end:14480-14499 MsG0080048775.01.T01:intron 35.0%
ATTGAGGAAGGATTGAATTG+TGG - contig435end:10248-10267 MsG0080048775.01.T01:intergenic 35.0%
ATTGCACACTTAGTTGTTGT+CGG - contig435end:4251-4270 MsG0080048775.01.T01:intergenic 35.0%
CAAAAGTGATCAAACTTCGT+CGG - contig435end:7151-7170 MsG0080048775.01.T01:intergenic 35.0%
CAATGTGGATTCACATAACT+TGG + contig435end:14021-14040 MsG0080048775.01.T01:intron 35.0%
CACTGTACAATATCACAATG+TGG + contig435end:14006-14025 MsG0080048775.01.T01:intron 35.0%
CAGAATTGAATTTGAGGAAG+AGG + contig435end:14881-14900 MsG0080048775.01.T01:exon 35.0%
CCAGATTTAAATTTAGCCCA+AGG - contig435end:7004-7023 MsG0080048775.01.T01:intergenic 35.0%
CCATATATGGAAAAAGTGGA+AGG - contig435end:9284-9303 MsG0080048775.01.T01:intergenic 35.0%
CCTTGGGCTAAATTTAAATC+TGG + contig435end:7001-7020 MsG0080048775.01.T01:CDS 35.0%
CGGAAACCTGAATATTTCAA+GGG - contig435end:13809-13828 MsG0080048775.01.T01:intergenic 35.0%
CTACAAACAAGAGTAGGAAA+TGG + contig435end:2974-2993 MsG0080048775.01.T01:intron 35.0%
CTAGGAAAAAATTTACGCAG+GGG - contig435end:9230-9249 MsG0080048775.01.T01:intergenic 35.0%
CTGATTGAGTGAAATGGTTT+AGG + contig435end:2699-2718 MsG0080048775.01.T01:intron 35.0%
CTGTAATCTTATGACTTTCG+AGG + contig435end:11373-11392 MsG0080048775.01.T01:intron 35.0%
CTTACATGTTCAAGAATACG+TGG + contig435end:3452-3471 MsG0080048775.01.T01:intron 35.0%
GAAAAAAGTGGATGTGCATA+GGG + contig435end:10647-10666 MsG0080048775.01.T01:CDS 35.0%
GAAAAACGTTTGTTCTTCAC+CGG + contig435end:7396-7415 MsG0080048775.01.T01:intron 35.0%
GAAAAGAATGGTGATTCCAA+AGG + contig435end:13185-13204 MsG0080048775.01.T01:CDS 35.0%
GAAAAGGACGTATTTGTTTG+GGG + contig435end:3335-3354 MsG0080048775.01.T01:intron 35.0%
GAAAATACATCATCAACCCT+TGG + contig435end:6984-7003 MsG0080048775.01.T01:CDS 35.0%
GAAGAAATGAGATTGGAAGA+GGG - contig435end:10193-10212 MsG0080048775.01.T01:intergenic 35.0%
GAGAAAAGGACGTATTTGTT+TGG + contig435end:3333-3352 MsG0080048775.01.T01:intron 35.0%
GAGAACTGTTCATCAACAAT+GGG - contig435end:5693-5712 MsG0080048775.01.T01:intergenic 35.0%
GAGATACTTTCGCAGTTAAT+CGG + contig435end:6090-6109 MsG0080048775.01.T01:intron 35.0%
GAGTAGATGAACTATGGTTT+GGG + contig435end:3663-3682 MsG0080048775.01.T01:intron 35.0%
GAGTTGGAAAAATCAGTGAT+AGG + contig435end:3199-3218 MsG0080048775.01.T01:intron 35.0%
GCTAAAGAGATGAATTCTTG+TGG - contig435end:10109-10128 MsG0080048775.01.T01:intergenic 35.0%
GCTAGGAAAAAATTTACGCA+GGG - contig435end:9231-9250 MsG0080048775.01.T01:intergenic 35.0%
GCTGCATTACACTAGTAAAA+AGG + contig435end:12310-12329 MsG0080048775.01.T01:CDS 35.0%
GGAGAAATTGATGCATGTAA+AGG + contig435end:15577-15596 MsG0080048775.01.T01:exon 35.0%
GTACATTAGATACGGGAATT+AGG - contig435end:12106-12125 MsG0080048775.01.T01:intergenic 35.0%
GTCATCACGATTAAACAACT+TGG - contig435end:15465-15484 MsG0080048775.01.T01:intergenic 35.0%
GTGGAAGAAGAAAGAAAACT+CGG + contig435end:2647-2666 MsG0080048775.01.T01:CDS 35.0%
GTGGGTAAAAAGAACTTCTT+GGG - contig435end:7039-7058 MsG0080048775.01.T01:intergenic 35.0%
GTTAAATGAATGAGTGAGCT+AGG - contig435end:13872-13891 MsG0080048775.01.T01:intergenic 35.0%
GTTGAAAACTTGACCAAAGT+TGG + contig435end:7374-7393 MsG0080048775.01.T01:intron 35.0%
GTTGTTTAATCGTGATGACA+GGG + contig435end:15466-15485 MsG0080048775.01.T01:exon 35.0%
TAAAAGAAGGTAGAGAGAGA+GGG - contig435end:5018-5037 MsG0080048775.01.T01:intergenic 35.0%
TAAACTAGCACAGTGCAAAT+TGG - contig435end:13460-13479 MsG0080048775.01.T01:intergenic 35.0%
TATAGATGATACGTCCAAAG+AGG - contig435end:15614-15633 MsG0080048775.01.T01:intergenic 35.0%
TCAATAACACCTCCAAGTAA+AGG - contig435end:3236-3255 MsG0080048775.01.T01:intergenic 35.0%
TCATGCATTTCATAGTTACG+TGG + contig435end:3606-3625 MsG0080048775.01.T01:intron 35.0%
TCTCTCCTTACGAAAAATGA+TGG + contig435end:5942-5961 MsG0080048775.01.T01:intron 35.0%
TCTGAAGACTTTGCATTACA+CGG + contig435end:11205-11224 MsG0080048775.01.T01:intron 35.0%
TGAAGAAATGAGATTGGAAG+AGG - contig435end:10194-10213 MsG0080048775.01.T01:intergenic 35.0%
TGACATGATGTTATCTTCTC+TGG + contig435end:15496-15515 MsG0080048775.01.T01:exon 35.0%
TGATATGGTGTGAGGAATTA+GGG + contig435end:7245-7264 MsG0080048775.01.T01:intron 35.0%
TGCAATGAATACCAGCAATT+TGG - contig435end:13354-13373 MsG0080048775.01.T01:intergenic 35.0%
TGCAGCCTATATTGAAAAGA+AGG - contig435end:11603-11622 MsG0080048775.01.T01:intergenic 35.0%
TGCAGTAAGTAACTCTTTGA+GGG - contig435end:12535-12554 MsG0080048775.01.T01:intergenic 35.0%
TGGAAGAAGAAAGAAAACTC+GGG + contig435end:2648-2667 MsG0080048775.01.T01:CDS 35.0%
TGGGTAAAAAGAACTTCTTG+GGG - contig435end:7038-7057 MsG0080048775.01.T01:intergenic 35.0%
TGTAATGCAAAGTCTTCAGA+TGG - contig435end:11205-11224 MsG0080048775.01.T01:intergenic 35.0%
TTATGGATAGTGTTGTGAGA+GGG - contig435end:9982-10001 MsG0080048775.01.T01:intergenic 35.0%
TTCTCGTTTGCGTTTCATAA+AGG + contig435end:6367-6386 MsG0080048775.01.T01:intron 35.0%
TTCTTGCAGGATTTGATTGA+GGG + contig435end:10966-10985 MsG0080048775.01.T01:CDS 35.0%
TTTAGTAGCTGTAACACTGT+GGG - contig435end:12853-12872 MsG0080048775.01.T01:intergenic 35.0%
TTTATGGATAGTGTTGTGAG+AGG - contig435end:9983-10002 MsG0080048775.01.T01:intergenic 35.0%
! AAATAGTGAGTAGCCGATTT+GGG - contig435end:7124-7143 MsG0080048775.01.T01:intergenic 35.0%
! AATGTGATACTGACTGATTC+CGG + contig435end:14963-14982 MsG0080048775.01.T01:exon 35.0%
! AGCGTCTAAAACTCATCTTA+TGG + contig435end:12380-12399 MsG0080048775.01.T01:CDS 35.0%
! AGTTAGAACAATTGCTGTTG+AGG + contig435end:11769-11788 MsG0080048775.01.T01:CDS 35.0%
! ATGATGTATTTTCCCCAAGA+AGG - contig435end:6977-6996 MsG0080048775.01.T01:intergenic 35.0%
! ATGGAAGAATGACCTCTTTT+TGG + contig435end:6144-6163 MsG0080048775.01.T01:intron 35.0%
! ATTTTCTCACCTCCATTACT+TGG - contig435end:14150-14169 MsG0080048775.01.T01:intergenic 35.0%
! ATTTTGCAAGTATGCCATCT+CGG + contig435end:12353-12372 MsG0080048775.01.T01:CDS 35.0%
! CAAGAAGTTCTTTTTACCCA+CGG + contig435end:7038-7057 MsG0080048775.01.T01:intron 35.0%
! CATAGACATATCTCCTGTTT+TGG + contig435end:13109-13128 MsG0080048775.01.T01:CDS 35.0%
! CCTTGAAATATTCAGGTTTC+CGG + contig435end:13807-13826 MsG0080048775.01.T01:intron 35.0%
! GAAGGCTTTTGATGTCATTA+TGG - contig435end:14997-15016 MsG0080048775.01.T01:intergenic 35.0%
! GACTTAGAGTATGTTTTCTG+GGG - contig435end:4447-4466 MsG0080048775.01.T01:intergenic 35.0%
! GAGAGGATTTAGAGGATTTT+AGG - contig435end:10144-10163 MsG0080048775.01.T01:intergenic 35.0%
! GGGGTATTTATAGGTAGAAA+TGG + contig435end:7277-7296 MsG0080048775.01.T01:intron 35.0%
! GTAAAAGCATAAGGTACATC+AGG - contig435end:15744-15763 MsG0080048775.01.T01:intergenic 35.0%
! GTGCAGACCTAATTTTAGAT+TGG - contig435end:12719-12738 MsG0080048775.01.T01:intergenic 35.0%
! GTGCATATTAAGTTGTGTAG+GGG + contig435end:7539-7558 MsG0080048775.01.T01:CDS 35.0%
! GTTAGAACAATTGCTGTTGA+GGG + contig435end:11770-11789 MsG0080048775.01.T01:CDS 35.0%
! TAAACATCACGTCAGTTTTG+TGG - contig435end:3409-3428 MsG0080048775.01.T01:intergenic 35.0%
! TATATGTGAAGAATGGTGGA+AGG + contig435end:10551-10570 MsG0080048775.01.T01:CDS 35.0%
! TCGTGTCCTTCATCTATTTT+GGG + contig435end:11799-11818 MsG0080048775.01.T01:CDS 35.0%
! TGAAGAAGTATGGAGATGAT+TGG - contig435end:3102-3121 MsG0080048775.01.T01:intergenic 35.0%
! TGTATCCTTATCCTCTTTTG+AGG - contig435end:11693-11712 MsG0080048775.01.T01:intergenic 35.0%
! TTCCCCTTTTCTACCTTATT+CGG + contig435end:5329-5348 MsG0080048775.01.T01:intron 35.0%
! TTTTAGTAGCTGTAACACTG+TGG - contig435end:12854-12873 MsG0080048775.01.T01:intergenic 35.0%
! TTTTCATCTGATTGGGAACT+GGG - contig435end:10363-10382 MsG0080048775.01.T01:intergenic 35.0%
! TTTTCTACCTTATTCGGCTT+TGG + contig435end:5335-5354 MsG0080048775.01.T01:intron 35.0%
! TTTTCTCACCTCCATTACTT+GGG - contig435end:14149-14168 MsG0080048775.01.T01:intergenic 35.0%
! TTTTTCATCTGATTGGGAAC+TGG - contig435end:10364-10383 MsG0080048775.01.T01:intergenic 35.0%
!! AAAGGAGCGATTTTTAACTC+CGG - contig435end:5205-5224 MsG0080048775.01.T01:intergenic 35.0%
!! AAAGGATATTTTCGGTGTAG+TGG + contig435end:6316-6335 MsG0080048775.01.T01:intron 35.0%
!! AAGAGTATAATGGATGCAGT+TGG + contig435end:15356-15375 MsG0080048775.01.T01:exon 35.0%
!! AAGTATGGAGGGGTATTTAT+AGG + contig435end:7268-7287 MsG0080048775.01.T01:intron 35.0%
!! AGAGTATAATGGATGCAGTT+GGG + contig435end:15357-15376 MsG0080048775.01.T01:exon 35.0%
!! ATAGTGTGGATTAGCCAAAA+GGG - contig435end:14513-14532 MsG0080048775.01.T01:intergenic 35.0%
!! CAAACTAAAGTGTTGTATGC+AGG - contig435end:4290-4309 MsG0080048775.01.T01:intergenic 35.0%
!! CAAATGACGGTTGATAATGT+TGG + contig435end:13152-13171 MsG0080048775.01.T01:CDS 35.0%
!! CCTGCAGATTTTAAAAGACT+TGG - contig435end:3833-3852 MsG0080048775.01.T01:intergenic 35.0%
!! TATAGTGTGGATTAGCCAAA+AGG - contig435end:14514-14533 MsG0080048775.01.T01:intergenic 35.0%
!! TCTTGGTTTGTTCACTTGTT+GGG + contig435end:15387-15406 MsG0080048775.01.T01:exon 35.0%
!! TTCTTGGTTTGTTCACTTGT+TGG + contig435end:15386-15405 MsG0080048775.01.T01:exon 35.0%
!!! ACAGTTTTGGCTACAATCAA+GGG - contig435end:15227-15246 MsG0080048775.01.T01:intergenic 35.0%
!!! ATATTAGAAGGGTTTTGGGA+GGG + contig435end:11024-11043 MsG0080048775.01.T01:CDS 35.0%
!!! ATGAATTAGGGTTTTGAGAG+AGG - contig435end:10161-10180 MsG0080048775.01.T01:intergenic 35.0%
!!! CCAAGTCTTTTAAAATCTGC+AGG + contig435end:3830-3849 MsG0080048775.01.T01:intron 35.0%
!!! CCTTCCACTTTTTCCATATA+TGG + contig435end:9281-9300 MsG0080048775.01.T01:intron 35.0%
!!! GAGATACATTTTGACTTAGG+GGG - contig435end:3900-3919 MsG0080048775.01.T01:intergenic 35.0%
!!! GATTCTGTTTTAAGGGTTTG+TGG + contig435end:5464-5483 MsG0080048775.01.T01:intron 35.0%
!!! GATTTTTCTGATTTGCTACC+TGG + contig435end:10459-10478 MsG0080048775.01.T01:CDS 35.0%
!!! GTTCACTTTTTACCCCAAAA+AGG - contig435end:6926-6945 MsG0080048775.01.T01:intergenic 35.0%
!!! TAATTTTTAGCATTCGGGGA+TGG + contig435end:2757-2776 MsG0080048775.01.T01:intron 35.0%
!!! TATATTAGAAGGGTTTTGGG+AGG + contig435end:11023-11042 MsG0080048775.01.T01:CDS 35.0%
!!! TGTTTTAAGGGTTTGTGGTT+CGG + contig435end:5469-5488 MsG0080048775.01.T01:intron 35.0%
AAAAGAAGGTAGAGAGAGAG+GGG - contig435end:5017-5036 MsG0080048775.01.T01:intergenic 40.0%
AAACTGCAATATCGTTGGTC+TGG - contig435end:6271-6290 MsG0080048775.01.T01:intergenic 40.0%
AAAGAAAGGCCTTTACTTGG+AGG + contig435end:3224-3243 MsG0080048775.01.T01:intron 40.0%
AAAGGACGTATTTGTTTGGG+GGG + contig435end:3337-3356 MsG0080048775.01.T01:intron 40.0%
AAAGTGATCAAACTTCGTCG+GGG - contig435end:7149-7168 MsG0080048775.01.T01:intergenic 40.0%
AAGACGGTTTACAGGGATAT+AGG - contig435end:2809-2828 MsG0080048775.01.T01:intergenic 40.0%
AAGGTACATCAGGTGTCTAA+AGG - contig435end:15734-15753 MsG0080048775.01.T01:intergenic 40.0%
ACCTCAACAAGTGCTTTGTA+AGG + contig435end:14716-14735 MsG0080048775.01.T01:exon 40.0%
AGAACAAAAGGACTTTGAGC+TGG + contig435end:15412-15431 MsG0080048775.01.T01:exon 40.0%
AGAAGAAAATGCACAACCAG+AGG - contig435end:13312-13331 MsG0080048775.01.T01:intergenic 40.0%
AGAAGAAACCTGTAGAGAAG+TGG - contig435end:14427-14446 MsG0080048775.01.T01:intergenic 40.0%
AGCCGAATAAGGTAGAAAAG+GGG - contig435end:5334-5353 MsG0080048775.01.T01:intergenic 40.0%
AGGGAGTGAAGAAATGAGAT+TGG - contig435end:10200-10219 MsG0080048775.01.T01:intergenic 40.0%
AGGGGACTTGTAATTAGAGA+TGG - contig435end:7752-7771 MsG0080048775.01.T01:intergenic 40.0%
AGGGTCATATATGCCAAAAC+AGG - contig435end:13125-13144 MsG0080048775.01.T01:intergenic 40.0%
AGTCAGTGAACCATGCTATA+TGG + contig435end:12506-12525 MsG0080048775.01.T01:CDS 40.0%
AGTGGAAGGTTTACTAACTG+GGG + contig435end:12560-12579 MsG0080048775.01.T01:CDS 40.0%
ATAGAGGTTGTGAAAAGGGT+GGG + contig435end:6119-6138 MsG0080048775.01.T01:intron 40.0%
ATGATGCAGATTGGACCTAA+AGG + contig435end:4875-4894 MsG0080048775.01.T01:intron 40.0%
ATGATGTATGCAACGAGGTA+AGG + contig435end:11882-11901 MsG0080048775.01.T01:CDS 40.0%
ATGGATACAAGACGGTTTAC+AGG - contig435end:2817-2836 MsG0080048775.01.T01:intergenic 40.0%
ATTAATCAGAGGACCGTTGA+TGG + contig435end:11050-11069 MsG0080048775.01.T01:CDS 40.0%
ATTCCACTCCTTGAATCTTC+TGG - contig435end:10936-10955 MsG0080048775.01.T01:intergenic 40.0%
CAAAAGTTCCAGAACTTGCA+TGG - contig435end:10998-11017 MsG0080048775.01.T01:intergenic 40.0%
CAACATCTTCAGGTAAACCA+TGG - contig435end:12692-12711 MsG0080048775.01.T01:intergenic 40.0%
CAAGGAGTGGAATTGAGAAT+GGG + contig435end:10943-10962 MsG0080048775.01.T01:CDS 40.0%
CAAGTTATTGGCAAGAGTGA+AGG - contig435end:15015-15034 MsG0080048775.01.T01:intergenic 40.0%
CAATAAACTTACGGCTATGC+TGG + contig435end:15313-15332 MsG0080048775.01.T01:exon 40.0%
CAATTCTGTGATGATACAGC+CGG - contig435end:14869-14888 MsG0080048775.01.T01:intergenic 40.0%
CACATTATCTGGACAAACAG+TGG - contig435end:12628-12647 MsG0080048775.01.T01:intergenic 40.0%
CACTGTTTGTCCAGATAATG+TGG + contig435end:12626-12645 MsG0080048775.01.T01:CDS 40.0%
CAGTGCAAATTGGGAATGAA+AGG - contig435end:13450-13469 MsG0080048775.01.T01:intergenic 40.0%
CATAACTTGGAGTCAACAAC+TGG + contig435end:14034-14053 MsG0080048775.01.T01:intron 40.0%
CATATCCTTTCAATGGGTAG+GGG + contig435end:8521-8540 MsG0080048775.01.T01:intron 40.0%
CCCACGGTAAAAAGTTTCTA+CGG + contig435end:7054-7073 MsG0080048775.01.T01:intron 40.0%
CCGGAAACCTGAATATTTCA+AGG - contig435end:13810-13829 MsG0080048775.01.T01:intergenic 40.0%
CGAGTAGATGAACTATGGTT+TGG + contig435end:3662-3681 MsG0080048775.01.T01:intron 40.0%
CGGAGAAGATAAAGAAAGGA+AGG - contig435end:5064-5083 MsG0080048775.01.T01:intergenic 40.0%
CGTGGGTAAAAAGAACTTCT+TGG - contig435end:7040-7059 MsG0080048775.01.T01:intergenic 40.0%
CTAAAAGAAGGTAGAGAGAG+AGG - contig435end:5019-5038 MsG0080048775.01.T01:intergenic 40.0%
CTGAAGACTTTGCATTACAC+GGG + contig435end:11206-11225 MsG0080048775.01.T01:intron 40.0%
CTGAATGCAGATCAGATAGA+GGG + contig435end:12447-12466 MsG0080048775.01.T01:CDS 40.0%
CTGCAGTAAGTAACTCTTTG+AGG - contig435end:12536-12555 MsG0080048775.01.T01:intergenic 40.0%
CTTAAGGACTTCATGAGAGT+GGG - contig435end:11948-11967 MsG0080048775.01.T01:intergenic 40.0%
GAAAGTGAGCAAAACCGTTT+GGG + contig435end:7581-7600 MsG0080048775.01.T01:CDS 40.0%
GAAATTATAGCAGGCCAGAA+TGG - contig435end:13674-13693 MsG0080048775.01.T01:intergenic 40.0%
GAAGAAAATGCACAACCAGA+GGG - contig435end:13311-13330 MsG0080048775.01.T01:intergenic 40.0%
GAAGGCTATTCAGTTCTTGA+GGG + contig435end:3285-3304 MsG0080048775.01.T01:intron 40.0%
GAGAAAGAAAGGCCTTTACT+TGG + contig435end:3221-3240 MsG0080048775.01.T01:intron 40.0%
GAGGGGTTATAAAAGGATGA+AGG + contig435end:7997-8016 MsG0080048775.01.T01:intron 40.0%
GCATATCCTTTCAATGGGTA+GGG + contig435end:8520-8539 MsG0080048775.01.T01:intron 40.0%
GGAGAACTGTTCATCAACAA+TGG - contig435end:5694-5713 MsG0080048775.01.T01:intergenic 40.0%
GGATGTGTTGAGATTACAGA+TGG + contig435end:5518-5537 MsG0080048775.01.T01:intron 40.0%
GGCACAAGTAGTGAAAAGAA+TGG + contig435end:13173-13192 MsG0080048775.01.T01:CDS 40.0%
GGGATATATTGTTTCGAGCA+TGG + contig435end:10901-10920 MsG0080048775.01.T01:CDS 40.0%
GGGTAATTGGGTAGACATAT+GGG + contig435end:14360-14379 MsG0080048775.01.T01:intron 40.0%
GTAAGGCTTTCTACGTTGAA+TGG + contig435end:11899-11918 MsG0080048775.01.T01:CDS 40.0%
GTGATATGGTGTGAGGAATT+AGG + contig435end:7244-7263 MsG0080048775.01.T01:intron 40.0%
GTTACTTACTGCAGAGAAAG+TGG + contig435end:12542-12561 MsG0080048775.01.T01:CDS 40.0%
GTTCTTGCAGGATTTGATTG+AGG + contig435end:10965-10984 MsG0080048775.01.T01:CDS 40.0%
TAAGTGTGCAATGCACTGTT+GGG + contig435end:4259-4278 MsG0080048775.01.T01:intron 40.0%
TAATCGTGATGACAGGGATT+GGG + contig435end:15472-15491 MsG0080048775.01.T01:exon 40.0%
TAGGGTTTATATGTTTCGCG+AGG + contig435end:10665-10684 MsG0080048775.01.T01:CDS 40.0%
TAGTTTCTCAACCCCATCAA+CGG - contig435end:11066-11085 MsG0080048775.01.T01:intergenic 40.0%
TATAAGCTGGTATACCAACC+AGG - contig435end:11399-11418 MsG0080048775.01.T01:intergenic 40.0%
TATAGAGGTTGTGAAAAGGG+TGG + contig435end:6118-6137 MsG0080048775.01.T01:intron 40.0%
TATGAAACGCAAACGAGAAG+AGG - contig435end:6366-6385 MsG0080048775.01.T01:intergenic 40.0%
TCAAGGAGTGGAATTGAGAA+TGG + contig435end:10942-10961 MsG0080048775.01.T01:CDS 40.0%
TCGTCGGAGAAGATAAAGAA+AGG - contig435end:5068-5087 MsG0080048775.01.T01:intergenic 40.0%
TCTGAAAACGTGTAGAGGAA+GGG - contig435end:5260-5279 MsG0080048775.01.T01:intergenic 40.0%
TGAAAGTGAGCAAAACCGTT+TGG + contig435end:7580-7599 MsG0080048775.01.T01:CDS 40.0%
TGAACTATGTGTATCGTCTC+TGG + contig435end:14629-14648 MsG0080048775.01.T01:intron 40.0%
TGGATACAAGACGGTTTACA+GGG - contig435end:2816-2835 MsG0080048775.01.T01:intergenic 40.0%
TGGGAGGGTTTATTAATCAG+AGG + contig435end:11039-11058 MsG0080048775.01.T01:CDS 40.0%
TGGGTAATTGGGTAGACATA+TGG + contig435end:14359-14378 MsG0080048775.01.T01:intron 40.0%
TGTGAGGAATTAGGGAAGTA+TGG + contig435end:7253-7272 MsG0080048775.01.T01:intron 40.0%
TTAAGGACTTCATGAGAGTG+GGG - contig435end:11947-11966 MsG0080048775.01.T01:intergenic 40.0%
TTAATCAGAGGACCGTTGAT+GGG + contig435end:11051-11070 MsG0080048775.01.T01:CDS 40.0%
TTAATCGTGATGACAGGGAT+TGG + contig435end:15471-15490 MsG0080048775.01.T01:exon 40.0%
TTACAAGCCAAAGCCGAATA+AGG - contig435end:5345-5364 MsG0080048775.01.T01:intergenic 40.0%
TTGAATGCAATGTCTTGTGC+AGG + contig435end:8488-8507 MsG0080048775.01.T01:intron 40.0%
TTGAGTCTGAAAACGTGTAG+AGG - contig435end:5265-5284 MsG0080048775.01.T01:intergenic 40.0%
TTGCTCTTTGACTATGTGTG+AGG - contig435end:5552-5571 MsG0080048775.01.T01:intergenic 40.0%
TTGTACGACGGTTTGATGTA+CGG + contig435end:5376-5395 MsG0080048775.01.T01:intron 40.0%
TTTCTCGCTTTGACTAGGTT+TGG - contig435end:2872-2891 MsG0080048775.01.T01:intergenic 40.0%
! AACTTGCGGTTTTTGTACGA+CGG + contig435end:5364-5383 MsG0080048775.01.T01:intron 40.0%
! AAGAAGTTTTTCCAGCCCAT+AGG + contig435end:2582-2601 MsG0080048775.01.T01:exon 40.0%
! AAGTCAGCATTGAGCATTGT+GGG + contig435end:13075-13094 MsG0080048775.01.T01:CDS 40.0%
! AATTGAGAATGGGTTCTTGC+AGG + contig435end:10953-10972 MsG0080048775.01.T01:CDS 40.0%
! ACCGTAGAAACTTTTTACCG+TGG - contig435end:7058-7077 MsG0080048775.01.T01:intergenic 40.0%
! ACCTTACAAAGCACTTGTTG+AGG - contig435end:14720-14739 MsG0080048775.01.T01:intergenic 40.0%
! ACTATTGAGGGAAAGTACGA+AGG - contig435end:12267-12286 MsG0080048775.01.T01:intergenic 40.0%
! ACTTGTTGGGCTAGAACAAA+AGG + contig435end:15400-15419 MsG0080048775.01.T01:exon 40.0%
! AGAAGTTTTTCCAGCCCATA+GGG + contig435end:2583-2602 MsG0080048775.01.T01:exon 40.0%
! AGATGCCGGATTTTATAGTG+TGG - contig435end:14527-14546 MsG0080048775.01.T01:intergenic 40.0%
! AGGAATTAGGGAAGTATGGA+GGG + contig435end:7257-7276 MsG0080048775.01.T01:intron 40.0%
! ATCAATTCTCACTGGTTAGC+TGG + contig435end:12137-12156 MsG0080048775.01.T01:intron 40.0%
! ATGAACTATGGTTTGGGTCA+GGG + contig435end:3669-3688 MsG0080048775.01.T01:intron 40.0%
! ATGGTGGAAGGAGAATTTAC+CGG + contig435end:10563-10582 MsG0080048775.01.T01:CDS 40.0%
! CATAGCTGAAAGAGCTTTTC+AGG - contig435end:14929-14948 MsG0080048775.01.T01:intergenic 40.0%
! CCGTAGAAACTTTTTACCGT+GGG - contig435end:7057-7076 MsG0080048775.01.T01:intergenic 40.0%
! GAATGCTTTGCATCTGCTTT+TGG + contig435end:11640-11659 MsG0080048775.01.T01:CDS 40.0%
! GAGCTTCTCTCTCTAAAAGA+AGG - contig435end:5031-5050 MsG0080048775.01.T01:intergenic 40.0%
! GGCTTTTGATGTCATTATGG+AGG - contig435end:14994-15013 MsG0080048775.01.T01:intergenic 40.0%
! GGTCAAAGCATTCTTGAGTT+TGG + contig435end:12407-12426 MsG0080048775.01.T01:CDS 40.0%
! GTCGTGTCCTTCATCTATTT+TGG + contig435end:11798-11817 MsG0080048775.01.T01:CDS 40.0%
! TGCAGTTGGGGATATTTTCT+TGG + contig435end:15370-15389 MsG0080048775.01.T01:exon 40.0%
! TGTTCGATTCGAGAAGATTG+AGG - contig435end:10264-10283 MsG0080048775.01.T01:intergenic 40.0%
! TGTTTTGCTCCTCACAACAA+TGG + contig435end:14789-14808 MsG0080048775.01.T01:exon 40.0%
! TTTGTTAGCTTCTGAGCTAC+AGG - contig435end:12234-12253 MsG0080048775.01.T01:intergenic 40.0%
!! AAGTTGTTGCTTTCTTTGGG+AGG + contig435end:12741-12760 MsG0080048775.01.T01:CDS 40.0%
!! AATAGTGAGTAGCCGATTTG+GGG - contig435end:7123-7142 MsG0080048775.01.T01:intergenic 40.0%
!! AGCGGATTCGATTTTGTCTT+CGG + contig435end:10518-10537 MsG0080048775.01.T01:CDS 40.0%
!! ATACACAATAAGGTGGTGGA+TGG + contig435end:6027-6046 MsG0080048775.01.T01:intron 40.0%
!! CTGTTGGGAAGAGTTTGTTA+CGG - contig435end:4111-4130 MsG0080048775.01.T01:intergenic 40.0%
!! GAGAAATTTTGAGTGGGAGT+TGG + contig435end:3183-3202 MsG0080048775.01.T01:intron 40.0%
!! GAGTATAATGGATGCAGTTG+GGG + contig435end:15358-15377 MsG0080048775.01.T01:exon 40.0%
!! TACACAATAAGGTGGTGGAT+GGG + contig435end:6028-6047 MsG0080048775.01.T01:intron 40.0%
!! TACTGCTGTTCTGAAGTTCA+TGG + contig435end:14749-14768 MsG0080048775.01.T01:exon 40.0%
!!! CACAGTTTTGGCTACAATCA+AGG - contig435end:15228-15247 MsG0080048775.01.T01:intergenic 40.0%
!!! CTTATCCTCTTTTGAGGCAT+CGG - contig435end:11687-11706 MsG0080048775.01.T01:intergenic 40.0%
!!! GGATTTTAGGGTTAAGGTTG+TGG - contig435end:10131-10150 MsG0080048775.01.T01:intergenic 40.0%
!!! GGTTTTGAGAGAGGATTTAG+AGG - contig435end:10152-10171 MsG0080048775.01.T01:intergenic 40.0%
!!! GTTTGAGCTTGTGTTGGTTT+TGG + contig435end:5422-5441 MsG0080048775.01.T01:intron 40.0%
!!! TAAGTTGTGTAGGGGCATTT+TGG + contig435end:7547-7566 MsG0080048775.01.T01:CDS 40.0%
!!! TGTTGGTTTTGGTCCGATTT+GGG + contig435end:5433-5452 MsG0080048775.01.T01:intron 40.0%
!!! TTATCCTCTTTTGAGGCATC+GGG - contig435end:11686-11705 MsG0080048775.01.T01:intergenic 40.0%
!!! TTTTGACTTAGGGGGTGTAT+TGG - contig435end:3892-3911 MsG0080048775.01.T01:intergenic 40.0%
AAAACAGTGAGCAGCCTTCT+TGG + contig435end:6960-6979 MsG0080048775.01.T01:intron 45.0%
AAAACTACATCAGGCAGCCA+AGG - contig435end:15110-15129 MsG0080048775.01.T01:intergenic 45.0%
AAACAGTGAGCAGCCTTCTT+GGG + contig435end:6961-6980 MsG0080048775.01.T01:intron 45.0%
AAAGAAGGTAGAGAGAGAGG+GGG - contig435end:5016-5035 MsG0080048775.01.T01:intergenic 45.0%
AAATCCCGTCCAATTGGAGT+GGG + contig435end:2889-2908 MsG0080048775.01.T01:intron 45.0%
AAATCGTGGCTTTCCAGAGT+AGG + contig435end:3044-3063 MsG0080048775.01.T01:intron 45.0%
AACCGTCATTTGCAGAGCAA+GGG - contig435end:13144-13163 MsG0080048775.01.T01:intergenic 45.0%
AAGACTGGGTCACTTAATGC+TGG + contig435end:11979-11998 MsG0080048775.01.T01:CDS 45.0%
AAGCTGTGCCAGAAGATTCA+AGG + contig435end:10925-10944 MsG0080048775.01.T01:CDS 45.0%
AAGGACTTTGAGCTGGCATT+AGG + contig435end:15419-15438 MsG0080048775.01.T01:exon 45.0%
AAGTCGATGTTGGAGGCTTA+TGG + contig435end:10879-10898 MsG0080048775.01.T01:CDS 45.0%
AATCGTGATGACAGGGATTG+GGG + contig435end:15473-15492 MsG0080048775.01.T01:exon 45.0%
AATGCTGGGTACCCAAGTAA+TGG + contig435end:14135-14154 MsG0080048775.01.T01:intron 45.0%
AATTCTGGCCACTTCTCTAC+AGG + contig435end:14416-14435 MsG0080048775.01.T01:intron 45.0%
ACACCAAAATCCGTACATGC+GGG - contig435end:2927-2946 MsG0080048775.01.T01:intergenic 45.0%
AGAAATAGAGGGAGAGAGTG+AGG + contig435end:7210-7229 MsG0080048775.01.T01:intron 45.0%
AGAAGTCCTGCCACATTATC+TGG - contig435end:12639-12658 MsG0080048775.01.T01:intergenic 45.0%
AGATTGGACCTAAAGGATGC+AGG + contig435end:4882-4901 MsG0080048775.01.T01:intron 45.0%
AGCATTAAGTGACCCAGTCT+TGG - contig435end:11980-11999 MsG0080048775.01.T01:intergenic 45.0%
AGGCTATCTCTGACAAATGC+TGG + contig435end:14120-14139 MsG0080048775.01.T01:intron 45.0%
AGTCATATTTCGGTCTCTGC+AGG + contig435end:11106-11125 MsG0080048775.01.T01:CDS 45.0%
AGTCGATGTTGGAGGCTTAT+GGG + contig435end:10880-10899 MsG0080048775.01.T01:CDS 45.0%
AGTGTTGTCACAAACTGCCA+TGG + contig435end:12672-12691 MsG0080048775.01.T01:CDS 45.0%
ATCTGATTGGGAACTGGGTT+CGG - contig435end:10358-10377 MsG0080048775.01.T01:intergenic 45.0%
ATCTTATGACTTTCGAGGCC+TGG + contig435end:11378-11397 MsG0080048775.01.T01:intron 45.0%
ATGGATTCAGGTGAGGGTTT+GGG + contig435end:2776-2795 MsG0080048775.01.T01:intron 45.0%
ATTCGTTCGCAGATTCCCTA+TGG + contig435end:10852-10871 MsG0080048775.01.T01:CDS 45.0%
ATTGGACCTAAAGGATGCAG+GGG + contig435end:4884-4903 MsG0080048775.01.T01:intron 45.0%
CCACTCTCATGAAGTCCTTA+AGG + contig435end:11946-11965 MsG0080048775.01.T01:CDS 45.0%
CCATAGCAACTTGTACTGTG+AGG - contig435end:12012-12031 MsG0080048775.01.T01:intergenic 45.0%
CCTCACAGTACAAGTTGCTA+TGG + contig435end:12009-12028 MsG0080048775.01.T01:CDS 45.0%
CCTTAAGGACTTCATGAGAG+TGG - contig435end:11949-11968 MsG0080048775.01.T01:intergenic 45.0%
CGATGCCTCAAAAGAGGATA+AGG + contig435end:11685-11704 MsG0080048775.01.T01:CDS 45.0%
CGATTACATGCCTCCTCAAT+GGG - contig435end:12291-12310 MsG0080048775.01.T01:intergenic 45.0%
CGATTCGAGAAGATTGAGGA+AGG - contig435end:10260-10279 MsG0080048775.01.T01:intergenic 45.0%
CGTTCCTTTCTCTTGAGTGT+TGG + contig435end:3128-3147 MsG0080048775.01.T01:intron 45.0%
CGTTGTTGTGTGATTCCTGT+AGG + contig435end:12161-12180 MsG0080048775.01.T01:intron 45.0%
CTAAACCCACTCCAATTGGA+CGG - contig435end:2897-2916 MsG0080048775.01.T01:intergenic 45.0%
CTAAGTGTGCAATGCACTGT+TGG + contig435end:4258-4277 MsG0080048775.01.T01:intron 45.0%
CTGAAAACGTGTAGAGGAAG+GGG - contig435end:5259-5278 MsG0080048775.01.T01:intergenic 45.0%
CTTAACAACCCTGCTGCATA+AGG + contig435end:12785-12804 MsG0080048775.01.T01:CDS 45.0%
CTTACTGCAGAGAAAGTGGA+AGG + contig435end:12546-12565 MsG0080048775.01.T01:CDS 45.0%
CTTATGCAGCAGGGTTGTTA+AGG - contig435end:12787-12806 MsG0080048775.01.T01:intergenic 45.0%
GACACCAAAATCCGTACATG+CGG - contig435end:2928-2947 MsG0080048775.01.T01:intergenic 45.0%
GAGGAAGGATTGAATTGTGG+TGG - contig435end:10245-10264 MsG0080048775.01.T01:intergenic 45.0%
GATGCAGACAACCAAAATCC+AGG - contig435end:13726-13745 MsG0080048775.01.T01:intergenic 45.0%
GATTGGACCTAAAGGATGCA+GGG + contig435end:4883-4902 MsG0080048775.01.T01:intron 45.0%
GATTGGCGATCAACATCTTC+AGG - contig435end:12702-12721 MsG0080048775.01.T01:intergenic 45.0%
GCATGTCAAAGCCAAATTGC+TGG + contig435end:13340-13359 MsG0080048775.01.T01:intron 45.0%
GCGAGTTAACTCATGCTAGT+TGG - contig435end:7422-7441 MsG0080048775.01.T01:intergenic 45.0%
GCTGAATGCAGATCAGATAG+AGG + contig435end:12446-12465 MsG0080048775.01.T01:CDS 45.0%
GGAAAAGCTAATCGAGGCAA+GGG + contig435end:3358-3377 MsG0080048775.01.T01:intron 45.0%
GGAAGGCTATTCAGTTCTTG+AGG + contig435end:3284-3303 MsG0080048775.01.T01:intron 45.0%
GGAGAAAGTGATATGGTGTG+AGG + contig435end:7237-7256 MsG0080048775.01.T01:intron 45.0%
GGCATATCCTTTCAATGGGT+AGG + contig435end:8519-8538 MsG0080048775.01.T01:intron 45.0%
GGCTATCTCTGACAAATGCT+GGG + contig435end:14121-14140 MsG0080048775.01.T01:intron 45.0%
GGGTAAAGAGCAGAATTCGA+AGG + contig435end:7601-7620 MsG0080048775.01.T01:CDS 45.0%
GGTTAAGAATAGGCCCAAGA+CGG - contig435end:3020-3039 MsG0080048775.01.T01:intergenic 45.0%
GGTTCTATCCATGCAAGTTC+TGG + contig435end:10987-11006 MsG0080048775.01.T01:CDS 45.0%
GTAAAAAGGTCTCCAATGGC+CGG + contig435end:12324-12343 MsG0080048775.01.T01:CDS 45.0%
GTCTCATGATGTATGCAACG+AGG + contig435end:11877-11896 MsG0080048775.01.T01:CDS 45.0%
GTCTGAAAACGTGTAGAGGA+AGG - contig435end:5261-5280 MsG0080048775.01.T01:intergenic 45.0%
GTGAATGAAGGTGAAGGAGA+TGG + contig435end:15257-15276 MsG0080048775.01.T01:exon 45.0%
GTTAACTCATGCTAGTTGGC+CGG - contig435end:7418-7437 MsG0080048775.01.T01:intergenic 45.0%
GTTAAGAATAGGCCCAAGAC+GGG - contig435end:3019-3038 MsG0080048775.01.T01:intergenic 45.0%
GTTCTACAACACACCGAAAG+TGG + contig435end:15149-15168 MsG0080048775.01.T01:exon 45.0%
GTTGTGAAAAGGGTGGGAAA+TGG + contig435end:6125-6144 MsG0080048775.01.T01:intron 45.0%
GTTGTGAGGAGCAAAACACA+TGG - contig435end:14787-14806 MsG0080048775.01.T01:intergenic 45.0%
GTTTGTCCAGATAATGTGGC+AGG + contig435end:12630-12649 MsG0080048775.01.T01:CDS 45.0%
TAAACCCACTCCAATTGGAC+GGG - contig435end:2896-2915 MsG0080048775.01.T01:intergenic 45.0%
TAATCAGAGGACCGTTGATG+GGG + contig435end:11052-11071 MsG0080048775.01.T01:CDS 45.0%
TAGTAGCTGTAGGAGTTGCA+TGG + contig435end:12955-12974 MsG0080048775.01.T01:CDS 45.0%
TATAACATTGCCCTATGGGC+TGG - contig435end:2596-2615 MsG0080048775.01.T01:intergenic 45.0%
TCATGCAATGCTTGAACTCC+AGG - contig435end:10480-10499 MsG0080048775.01.T01:intergenic 45.0%
TCCTCAATGGGCACTATTGA+GGG - contig435end:12279-12298 MsG0080048775.01.T01:intergenic 45.0%
TCTGCAGTGAATGAAGGTGA+AGG + contig435end:15251-15270 MsG0080048775.01.T01:exon 45.0%
TGCAGAGACCGAAATATGAC+TGG - contig435end:11107-11126 MsG0080048775.01.T01:intergenic 45.0%
TGTCATTATGGAGGATCCAC+CGG - contig435end:14985-15004 MsG0080048775.01.T01:intergenic 45.0%
TGTGACCATATTATGCGTCG+AGG + contig435end:6060-6079 MsG0080048775.01.T01:intron 45.0%
TGTTGTGTGATTCCTGTAGG+TGG + contig435end:12164-12183 MsG0080048775.01.T01:intron 45.0%
TTAACCCTGTAACCCGTCTT+GGG + contig435end:3004-3023 MsG0080048775.01.T01:intron 45.0%
TTCGAAGTCAAACAACGCGA+AGG - contig435end:10691-10710 MsG0080048775.01.T01:intergenic 45.0%
TTGAGCACACTGTGCGAAAT+AGG + contig435end:14242-14261 MsG0080048775.01.T01:intron 45.0%
TTGCCGAGCCAGTCATATTT+CGG + contig435end:11096-11115 MsG0080048775.01.T01:CDS 45.0%
TTTAAAGGCCACAAGACCAG+CGG - contig435end:9258-9277 MsG0080048775.01.T01:intergenic 45.0%
TTTAACCCTGTAACCCGTCT+TGG + contig435end:3003-3022 MsG0080048775.01.T01:intron 45.0%
! ACGGGTTACAGGGTTAAAGT+AGG - contig435end:3001-3020 MsG0080048775.01.T01:intergenic 45.0%
! AGACCGAAATATGACTGGCT+CGG - contig435end:11102-11121 MsG0080048775.01.T01:intergenic 45.0%
! AGATAGCCTTCGCCTTTTTG+TGG - contig435end:14109-14128 MsG0080048775.01.T01:intergenic 45.0%
! CAAAATATTGCACCGGCCAT+TGG - contig435end:12339-12358 MsG0080048775.01.T01:intergenic 45.0%
! CAATTGGAGTGGGTTTAGAC+GGG + contig435end:2899-2918 MsG0080048775.01.T01:intron 45.0%
! CAGGGGCATATCCTTTCAAT+GGG + contig435end:8515-8534 MsG0080048775.01.T01:intron 45.0%
! CCAATTGGAGTGGGTTTAGA+CGG + contig435end:2898-2917 MsG0080048775.01.T01:intron 45.0%
! CGGATTCGATTTTGTCTTCG+GGG + contig435end:10520-10539 MsG0080048775.01.T01:CDS 45.0%
! CTGGAAAGCCACGATTTTGA+AGG - contig435end:3041-3060 MsG0080048775.01.T01:intergenic 45.0%
! GAAGTCAGCATTGAGCATTG+TGG + contig435end:13074-13093 MsG0080048775.01.T01:CDS 45.0%
! GAGGAATTAGGGAAGTATGG+AGG + contig435end:7256-7275 MsG0080048775.01.T01:intron 45.0%
! GATGAACTATGGTTTGGGTC+AGG + contig435end:3668-3687 MsG0080048775.01.T01:intron 45.0%
! GCGGATTCGATTTTGTCTTC+GGG + contig435end:10519-10538 MsG0080048775.01.T01:CDS 45.0%
! GCTACAATCAAGGGCCATTT+TGG - contig435end:15218-15237 MsG0080048775.01.T01:intergenic 45.0%
! GGAATTAGGGAAGTATGGAG+GGG + contig435end:7258-7277 MsG0080048775.01.T01:intron 45.0%
! GGATTGAATTGTGGTGGTGA+TGG - contig435end:10239-10258 MsG0080048775.01.T01:intergenic 45.0%
! GTGAAGGAATATGGCCCTTT+TGG + contig435end:14496-14515 MsG0080048775.01.T01:intron 45.0%
! GTGCTCAAGTTGCATGCATT+TGG - contig435end:14230-14249 MsG0080048775.01.T01:intergenic 45.0%
! TAGAGACTTGCTTCAGCATG+AGG + contig435end:12983-13002 MsG0080048775.01.T01:CDS 45.0%
! TGGGAGGGTTTGGAGATTTT+CGG - contig435end:10290-10309 MsG0080048775.01.T01:intergenic 45.0%
! TTGGCTGCCTGATGTAGTTT+TGG + contig435end:15109-15128 MsG0080048775.01.T01:exon 45.0%
!! AAACCAGAGTATCGTTCGTG+TGG - contig435end:4358-4377 MsG0080048775.01.T01:intergenic 45.0%
!! AACATCGACTTCCGTCCATA+GGG - contig435end:10870-10889 MsG0080048775.01.T01:intergenic 45.0%
!! ACACAATAAGGTGGTGGATG+GGG + contig435end:6029-6048 MsG0080048775.01.T01:intron 45.0%
!! AGCGATTTTTAACTCCGGTG+CGG - contig435end:5200-5219 MsG0080048775.01.T01:intergenic 45.0%
!! CTTCGAAGATGAGAGTATCG+AGG + contig435end:10704-10723 MsG0080048775.01.T01:CDS 45.0%
!! GCAGCGAATTTTGACCATTC+TGG + contig435end:13657-13676 MsG0080048775.01.T01:intron 45.0%
!! GGACTAGCTCATTACTTCGA+TGG - contig435end:7650-7669 MsG0080048775.01.T01:intergenic 45.0%
!! GGCTTTGGCTTGTAAACTTG+CGG + contig435end:5350-5369 MsG0080048775.01.T01:intron 45.0%
!! GTGATGGATTCGTAGAGAGA+GGG - contig435end:10223-10242 MsG0080048775.01.T01:intergenic 45.0%
!! TTGAGGGCATCCATATAGCA+TGG - contig435end:12519-12538 MsG0080048775.01.T01:intergenic 45.0%
!! TTGGGTTGAGTGATCAGCTT+GGG + contig435end:10811-10830 MsG0080048775.01.T01:CDS 45.0%
!! TTTGGGTTGAGTGATCAGCT+TGG + contig435end:10810-10829 MsG0080048775.01.T01:CDS 45.0%
!!! CCTGATGTAGTTTTGGCACT+GGG + contig435end:15116-15135 MsG0080048775.01.T01:exon 45.0%
!!! GTGTTGGTTTTGGTCCGATT+TGG + contig435end:5432-5451 MsG0080048775.01.T01:intron 45.0%
!!! TATAATATTTTTTTATAGTT+TGG + contig435end:8106-8125 MsG0080048775.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+GGG - contig435end:9930-9949 MsG0080048775.01.T01:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTTG+AGG - contig435end:9931-9950 MsG0080048775.01.T01:intergenic 5.0%
AACAGTGAGCAGCCTTCTTG+GGG + contig435end:6962-6981 MsG0080048775.01.T01:intron 50.0%
AATAGAGGGAGAGAGTGAGG+AGG + contig435end:7213-7232 MsG0080048775.01.T01:intron 50.0%
AATGTCTTGTGCAGGACTGC+AGG + contig435end:8496-8515 MsG0080048775.01.T01:intron 50.0%
ACACGTGTCTTTAGCGCTGT+TGG - contig435end:5718-5737 MsG0080048775.01.T01:intergenic 50.0%
ACGTGTCTTTAGCGCTGTTG+GGG - contig435end:5716-5735 MsG0080048775.01.T01:intergenic 50.0%
AGATCCCGATGCCTCAAAAG+AGG + contig435end:11679-11698 MsG0080048775.01.T01:CDS 50.0%
AGCGAGAAATCCCGTCCAAT+TGG + contig435end:2883-2902 MsG0080048775.01.T01:intron 50.0%
AGGAGCAAAACACATGGCAG+TGG - contig435end:14781-14800 MsG0080048775.01.T01:intergenic 50.0%
AGGAGGGGGAGAAAGTGATA+TGG + contig435end:7230-7249 MsG0080048775.01.T01:intron 50.0%
AGGGGTTGCTTGAACCTCTT+TGG + contig435end:15597-15616 MsG0080048775.01.T01:exon 50.0%
AGTCCACACGAACGATACTC+TGG + contig435end:4352-4371 MsG0080048775.01.T01:intron 50.0%
ATAGAGGGAGAGAGTGAGGA+GGG + contig435end:7214-7233 MsG0080048775.01.T01:intron 50.0%
ATCTTCTCCGACGAGAAGAG+TGG + contig435end:5074-5093 MsG0080048775.01.T01:intron 50.0%
ATGCGTTTCGCATCCGAGAA+AGG + contig435end:10431-10450 MsG0080048775.01.T01:CDS 50.0%
ATGGATTCGTAGAGAGAGGG+AGG - contig435end:10220-10239 MsG0080048775.01.T01:intergenic 50.0%
ATGTCTTGTGCAGGACTGCA+GGG + contig435end:8497-8516 MsG0080048775.01.T01:intron 50.0%
CAACCGTCATTTGCAGAGCA+AGG - contig435end:13145-13164 MsG0080048775.01.T01:intergenic 50.0%
CACCACCTCGACGCATAATA+TGG - contig435end:6068-6087 MsG0080048775.01.T01:intergenic 50.0%
CACGTGTCTTTAGCGCTGTT+GGG - contig435end:5717-5736 MsG0080048775.01.T01:intergenic 50.0%
CAGCGCTAAAGACACGTGTT+TGG + contig435end:5719-5738 MsG0080048775.01.T01:intron 50.0%
CATATTATGCGTCGAGGTGG+TGG + contig435end:6066-6085 MsG0080048775.01.T01:intron 50.0%
CCCAGTGCCAAAACTACATC+AGG - contig435end:15119-15138 MsG0080048775.01.T01:intergenic 50.0%
CCGTCTAAACCCACTCCAAT+TGG - contig435end:2901-2920 MsG0080048775.01.T01:intergenic 50.0%
CGGGATTTCTCGCTTTGACT+AGG - contig435end:2877-2896 MsG0080048775.01.T01:intergenic 50.0%
CTATGGACGGAAGTCGATGT+TGG + contig435end:10869-10888 MsG0080048775.01.T01:CDS 50.0%
CTCAATAGTGCCCATTGAGG+AGG + contig435end:12278-12297 MsG0080048775.01.T01:CDS 50.0%
CTCCTCAATGGGCACTATTG+AGG - contig435end:12280-12299 MsG0080048775.01.T01:intergenic 50.0%
GAAATCAACGATTCGCGCTC+CGG - contig435end:10585-10604 MsG0080048775.01.T01:intergenic 50.0%
GAAATCCCGTCCAATTGGAG+TGG + contig435end:2888-2907 MsG0080048775.01.T01:intron 50.0%
GACCATATTATGCGTCGAGG+TGG + contig435end:6063-6082 MsG0080048775.01.T01:intron 50.0%
GACCCTTGCTCTGCAAATGA+CGG + contig435end:13139-13158 MsG0080048775.01.T01:CDS 50.0%
GACTACCCCTACCCATTGAA+AGG - contig435end:8529-8548 MsG0080048775.01.T01:intergenic 50.0%
GCGATTACATGCCTCCTCAA+TGG - contig435end:12292-12311 MsG0080048775.01.T01:intergenic 50.0%
GGGAAAAGCTAATCGAGGCA+AGG + contig435end:3357-3376 MsG0080048775.01.T01:intron 50.0%
GGTGGATCACTTCCCCAAAT+CGG + contig435end:7108-7127 MsG0080048775.01.T01:intron 50.0%
GTAGCTGTAACACTGTGGGA+TGG - contig435end:12849-12868 MsG0080048775.01.T01:intergenic 50.0%
GTCGATGTTGGAGGCTTATG+GGG + contig435end:10881-10900 MsG0080048775.01.T01:CDS 50.0%
GTGCCAGAAGATTCAAGGAG+TGG + contig435end:10930-10949 MsG0080048775.01.T01:CDS 50.0%
GTGCTCTCTGCAGTGAATGA+AGG + contig435end:15245-15264 MsG0080048775.01.T01:exon 50.0%
GTTCAAAGGCTGAACCGGTT+CGG + contig435end:4941-4960 MsG0080048775.01.T01:intron 50.0%
GTTCGCAGATTCCCTATGGA+CGG + contig435end:10856-10875 MsG0080048775.01.T01:CDS 50.0%
GTTGAGTGATCAGCTTGGGA+AGG + contig435end:10815-10834 MsG0080048775.01.T01:CDS 50.0%
TAACTCGCGCTAGTGCTAAG+TGG + contig435end:7434-7453 MsG0080048775.01.T01:intron 50.0%
TATGACTTTCGAGGCCTGGT+TGG + contig435end:11382-11401 MsG0080048775.01.T01:intron 50.0%
TCAATGGGTAGGGGTAGTCT+TGG + contig435end:8530-8549 MsG0080048775.01.T01:intron 50.0%
TCCCTCAATAGTGCCCATTG+AGG + contig435end:12275-12294 MsG0080048775.01.T01:CDS 50.0%
TGAACCGGTCTAACCCTATC+AGG - contig435end:4916-4935 MsG0080048775.01.T01:intergenic 50.0%
TGCAAGTATGCCATCTCGGA+AGG + contig435end:12357-12376 MsG0080048775.01.T01:CDS 50.0%
TGCTTCAGCATGAGGATACC+AGG + contig435end:12991-13010 MsG0080048775.01.T01:CDS 50.0%
TGGATTCAGGTGAGGGTTTG+GGG + contig435end:2777-2796 MsG0080048775.01.T01:intron 50.0%
TGGATTCGTAGAGAGAGGGA+GGG - contig435end:10219-10238 MsG0080048775.01.T01:intergenic 50.0%
TGTGTGATTCCTGTAGGTGG+TGG + contig435end:12167-12186 MsG0080048775.01.T01:intron 50.0%
TTGGGGGGAAAAGCTAATCG+AGG + contig435end:3352-3371 MsG0080048775.01.T01:intron 50.0%
TTTAGACGCTCCTTCCGAGA+TGG - contig435end:12370-12389 MsG0080048775.01.T01:intergenic 50.0%
! AACCGGTTCAGCCTTTGAAC+CGG - contig435end:4941-4960 MsG0080048775.01.T01:intergenic 50.0%
! AAGGTGCTCTGTCCAAGACT+GGG + contig435end:11965-11984 MsG0080048775.01.T01:CDS 50.0%
! AGCTACAGGAGGTTGATCAC+TGG - contig435end:12220-12239 MsG0080048775.01.T01:intergenic 50.0%
! ATAAAAGAGAAGGGGGGTGC+AGG + contig435end:4823-4842 MsG0080048775.01.T01:intron 50.0%
! ATAGGCAGCCTTATGCAGCA+GGG - contig435end:12796-12815 MsG0080048775.01.T01:intergenic 50.0%
! GAGATTGAGGGTGTGAGATG+TGG + contig435end:2628-2647 MsG0080048775.01.T01:exon 50.0%
! GATGGATTCAGGTGAGGGTT+TGG + contig435end:2775-2794 MsG0080048775.01.T01:intron 50.0%
! GCAGGGGCATATCCTTTCAA+TGG + contig435end:8514-8533 MsG0080048775.01.T01:intron 50.0%
! GTACCCGCATGTACGGATTT+TGG + contig435end:2921-2940 MsG0080048775.01.T01:intron 50.0%
! GTCTTGGACAGAGCACCTTA+AGG - contig435end:11964-11983 MsG0080048775.01.T01:intergenic 50.0%
! GTGATACTGACTGATTCCGG+TGG + contig435end:14966-14985 MsG0080048775.01.T01:exon 50.0%
! GTTAGCTTCTGAGCTACAGG+AGG - contig435end:12231-12250 MsG0080048775.01.T01:intergenic 50.0%
! TAAGGTGCTCTGTCCAAGAC+TGG + contig435end:11964-11983 MsG0080048775.01.T01:CDS 50.0%
! TAGCATTCGGGGATGGATTC+AGG + contig435end:2764-2783 MsG0080048775.01.T01:intron 50.0%
! TCAGCTTGGGAAGGAGCTTT+TGG + contig435end:10824-10843 MsG0080048775.01.T01:CDS 50.0%
! TGATAGGGTTAGACCGGTTC+AGG + contig435end:4915-4934 MsG0080048775.01.T01:intron 50.0%
! TTCGGTGTAGTGGCAAACGT+AGG + contig435end:6326-6345 MsG0080048775.01.T01:intron 50.0%
!! CAACATCGACTTCCGTCCAT+AGG - contig435end:10871-10890 MsG0080048775.01.T01:intergenic 50.0%
!! CACAATAAGGTGGTGGATGG+GGG + contig435end:6030-6049 MsG0080048775.01.T01:intron 50.0%
!! CACTGCAGAGAGCACAGTTT+TGG - contig435end:15240-15259 MsG0080048775.01.T01:intergenic 50.0%
!! GATTTTTAACTCCGGTGCGG+CGG - contig435end:5197-5216 MsG0080048775.01.T01:intergenic 50.0%
!! GGTGATGGATTCGTAGAGAG+AGG - contig435end:10224-10243 MsG0080048775.01.T01:intergenic 50.0%
!! TGAGGCATCGGGATCTTCAA+GGG - contig435end:11675-11694 MsG0080048775.01.T01:intergenic 50.0%
!! TGGTGTTTTTGCGGGAAGAG+CGG - contig435end:10326-10345 MsG0080048775.01.T01:intergenic 50.0%
!! TTGAGGCATCGGGATCTTCA+AGG - contig435end:11676-11695 MsG0080048775.01.T01:intergenic 50.0%
!!! GCCTGATGTAGTTTTGGCAC+TGG + contig435end:15115-15134 MsG0080048775.01.T01:exon 50.0%
!!! TGGTGGTGGTGGTGTTTTTG+CGG - contig435end:10335-10354 MsG0080048775.01.T01:intergenic 50.0%
!!! TTTTTTCCTAGCTTCGCCGC+TGG + contig435end:9239-9258 MsG0080048775.01.T01:intron 50.0%
AAGGTAGAGAGAGAGGGGGA+AGG - contig435end:5012-5031 MsG0080048775.01.T01:intergenic 55.0%
ACCTCTTGACTCCTCTCTGG+TGG - contig435end:3632-3651 MsG0080048775.01.T01:intergenic 55.0%
ATCAGGCAGCCAAGGCTTTG+CGG - contig435end:15102-15121 MsG0080048775.01.T01:intergenic 55.0%
ATTCAGGTGAGGGTTTGGGG+TGG + contig435end:2780-2799 MsG0080048775.01.T01:intron 55.0%
CATCGAGAACCACCACCTAC+AGG - contig435end:12179-12198 MsG0080048775.01.T01:intergenic 55.0%
CGTGTCTTTAGCGCTGTTGG+GGG - contig435end:5715-5734 MsG0080048775.01.T01:intergenic 55.0%
GCTGGGTACCCAAGTAATGG+AGG + contig435end:14138-14157 MsG0080048775.01.T01:intron 55.0%
GGGGTGCAGGCAGTAATATG+GGG + contig435end:4836-4855 MsG0080048775.01.T01:intron 55.0%
GGGTGCAGGCAGTAATATGG+GGG + contig435end:4837-4856 MsG0080048775.01.T01:intron 55.0%
TAGACGGGTACCCGCATGTA+CGG + contig435end:2914-2933 MsG0080048775.01.T01:intron 55.0%
TAGAGGGAGAGAGTGAGGAG+GGG + contig435end:7215-7234 MsG0080048775.01.T01:intron 55.0%
TAGTTACGTGGCCACCAGAG+AGG + contig435end:3618-3637 MsG0080048775.01.T01:intron 55.0%
TGATTGGGAACTGGGTTCGG+TGG - contig435end:10355-10374 MsG0080048775.01.T01:intergenic 55.0%
TGCACCTCTTGACTCCTCTC+TGG - contig435end:3635-3654 MsG0080048775.01.T01:intergenic 55.0%
TGGACGGAAGTCGATGTTGG+AGG + contig435end:10872-10891 MsG0080048775.01.T01:CDS 55.0%
TGGGCCTGATAGGGTTAGAC+CGG + contig435end:4909-4928 MsG0080048775.01.T01:intron 55.0%
TGGGGAAGTGATCCACCCTT+GGG - contig435end:7105-7124 MsG0080048775.01.T01:intergenic 55.0%
TGTCTTGTGCAGGACTGCAG+GGG + contig435end:8498-8517 MsG0080048775.01.T01:intron 55.0%
TTCTCCGACGAGAAGAGTGG+TGG + contig435end:5077-5096 MsG0080048775.01.T01:intron 55.0%
TTGGGGAAGTGATCCACCCT+TGG - contig435end:7106-7125 MsG0080048775.01.T01:intergenic 55.0%
TTGTTGCAGCCGCAAAGCCT+TGG + contig435end:15090-15109 MsG0080048775.01.T01:exon 55.0%
! GATAGGCAGCCTTATGCAGC+AGG - contig435end:12797-12816 MsG0080048775.01.T01:intergenic 55.0%
! GGGGGTGCAGGCAGTAATAT+GGG + contig435end:4835-4854 MsG0080048775.01.T01:intron 55.0%
! TCGGGGATGGATTCAGGTGA+GGG + contig435end:2770-2789 MsG0080048775.01.T01:intron 55.0%
! TTCGGGGATGGATTCAGGTG+AGG + contig435end:2769-2788 MsG0080048775.01.T01:intron 55.0%
!! AGGCATCGGGATCTTCAAGG+GGG - contig435end:11673-11692 MsG0080048775.01.T01:intergenic 55.0%
!! ATAGGCCCAAGACGGGTTAC+AGG - contig435end:3012-3031 MsG0080048775.01.T01:intergenic 55.0%
!! GAGGCATCGGGATCTTCAAG+GGG - contig435end:11674-11693 MsG0080048775.01.T01:intergenic 55.0%
!! TAGGCCCAAGACGGGTTACA+GGG - contig435end:3011-3030 MsG0080048775.01.T01:intergenic 55.0%
!! TGTTTTTGCGGGAAGAGCGG+CGG - contig435end:10323-10342 MsG0080048775.01.T01:intergenic 55.0%
!!! GGTGGTGGTGGTGTTTTTGC+GGG - contig435end:10334-10353 MsG0080048775.01.T01:intergenic 55.0%
ACAAGACCAGCGGCGAAGCT+AGG - contig435end:9248-9267 MsG0080048775.01.T01:intergenic 60.0%
ACCTAAAGGATGCAGGGGCG+TGG + contig435end:4889-4908 MsG0080048775.01.T01:intron 60.0%
AGAGGGAGAGAGTGAGGAGG+GGG + contig435end:7216-7235 MsG0080048775.01.T01:intron 60.0%
CGAGCACGTGCTCAACTGCT+TGG + contig435end:13961-13980 MsG0080048775.01.T01:intron 60.0%
GCCACCAGAGAGGAGTCAAG+AGG + contig435end:3628-3647 MsG0080048775.01.T01:CDS 60.0%
GCCTTTGAACCGGCCTGAAC+CGG - contig435end:4931-4950 MsG0080048775.01.T01:intergenic 60.0%
! ACCGGTTCAGGCCGGTTCAA+AGG + contig435end:4927-4946 MsG0080048775.01.T01:intron 60.0%
! AGGGTTAGACCGGTTCAGGC+CGG + contig435end:4919-4938 MsG0080048775.01.T01:intron 60.0%
! CCTAAAGGATGCAGGGGCGT+GGG + contig435end:4890-4909 MsG0080048775.01.T01:intron 60.0%
! GGCCGGTTCAAAGGCTGAAC+CGG + contig435end:4936-4955 MsG0080048775.01.T01:intron 60.0%
! GGGGGGTGCAGGCAGTAATA+TGG + contig435end:4834-4853 MsG0080048775.01.T01:intron 60.0%
!! TAGCTTCGCCGCTGGTCTTG+TGG + contig435end:9247-9266 MsG0080048775.01.T01:intron 60.0%
!! TTGGGAACTGGGTTCGGTGG+TGG - contig435end:10352-10371 MsG0080048775.01.T01:intergenic 60.0%
ACGAGAAGAGTGGTGGCCGG+AGG + contig435end:5084-5103 MsG0080048775.01.T01:intron 65.0%
CACCGCACCGGAGATACCTC+CGG - contig435end:5103-5122 MsG0080048775.01.T01:intergenic 65.0%
CCCACGCCCCTGCATCCTTT+AGG - contig435end:4893-4912 MsG0080048775.01.T01:intergenic 65.0%
CCGACGAGAAGAGTGGTGGC+CGG + contig435end:5081-5100 MsG0080048775.01.T01:intron 65.0%
CCGGCCACCACTCTTCTCGT+CGG - contig435end:5084-5103 MsG0080048775.01.T01:intergenic 65.0%
TTTGCGGGAAGAGCGGCGGA+GGG - contig435end:10319-10338 MsG0080048775.01.T01:intergenic 65.0%
! TTTTGCGGGAAGAGCGGCGG+AGG - contig435end:10320-10339 MsG0080048775.01.T01:intergenic 65.0%
!! ACTGGGTTCGGTGGTGGTGG+TGG - contig435end:10346-10365 MsG0080048775.01.T01:intergenic 65.0%
!! GGAACTGGGTTCGGTGGTGG+TGG - contig435end:10349-10368 MsG0080048775.01.T01:intergenic 65.0%
!! GTGGTGGCCGGAGGTATCTC+CGG + contig435end:5093-5112 MsG0080048775.01.T01:intron 65.0%
CACCACTCGCGATGGCTCGC+CGG - contig435end:5127-5146 MsG0080048775.01.T01:intergenic 70.0%
GAGCCATCGCGAGTGGTGGC+CGG + contig435end:5129-5148 MsG0080048775.01.T01:intron 70.0%
GGTATCTCCGGTGCGGTGGC+CGG + contig435end:5105-5124 MsG0080048775.01.T01:intron 70.0%
! AGGGTGGCGGTGGGAGGGTT+TGG - contig435end:10300-10319 MsG0080048775.01.T01:intergenic 70.0%
! GCAGGGGCGTGGGCCTGATA+GGG + contig435end:4900-4919 MsG0080048775.01.T01:intron 70.0%
! TGCAGGGGCGTGGGCCTGAT+AGG + contig435end:4899-4918 MsG0080048775.01.T01:intron 70.0%
!! CGGAGGTATCTCCGGTGCGG+TGG + contig435end:5101-5120 MsG0080048775.01.T01:intron 70.0%
!! GGCCGGAGGTATCTCCGGTG+CGG + contig435end:5098-5117 MsG0080048775.01.T01:intron 70.0%
CCATCGCGAGTGGTGGCCGG+AGG + contig435end:5132-5151 MsG0080048775.01.T01:intron 75.0%
CCTCCGGCCACCACTCGCGA+TGG - contig435end:5135-5154 MsG0080048775.01.T01:intergenic 75.0%
CGGCGAGCCATCGCGAGTGG+TGG + contig435end:5125-5144 MsG0080048775.01.T01:intron 75.0%
CGGTGGCCGACGAGCCATCG+CGG + contig435end:5166-5185 MsG0080048775.01.T01:intron 75.0%
GGAAGAGCGGCGGAGGGTGG+CGG - contig435end:10313-10332 MsG0080048775.01.T01:intergenic 75.0%
TGGCCGACGAGCCATCGCGG+CGG + contig435end:5169-5188 MsG0080048775.01.T01:intron 75.0%
TGGCTCGTCGGCCACCGCAC+CGG - contig435end:5163-5182 MsG0080048775.01.T01:intergenic 75.0%
! GCGCCGCCGCGATGGCTCGT+CGG - contig435end:5175-5194 MsG0080048775.01.T01:intergenic 80.0%
! GCGGGAAGAGCGGCGGAGGG+TGG - contig435end:10316-10335 MsG0080048775.01.T01:intergenic 80.0%
! GGCCGGCGAGCCATCGCGAG+TGG + contig435end:5122-5141 MsG0080048775.01.T01:intron 80.0%
! TGGCTCGCCGGCCACCGCAC+CGG - contig435end:5115-5134 MsG0080048775.01.T01:intergenic 80.0%
!! AGAGCGGCGGAGGGTGGCGG+TGG - contig435end:10310-10329 MsG0080048775.01.T01:intergenic 80.0%
!! GAGCGGCGGAGGGTGGCGGT+GGG - contig435end:10309-10328 MsG0080048775.01.T01:intergenic 80.0%
!! GGCGGAGGGTGGCGGTGGGA+GGG - contig435end:10305-10324 MsG0080048775.01.T01:intergenic 80.0%
!! CGGCGGAGGGTGGCGGTGGG+AGG - contig435end:10306-10325 MsG0080048775.01.T01:intergenic 85.0%
! GTGCGGCGGCGCCGCCGCGA+TGG - contig435end:5183-5202 MsG0080048775.01.T01:intergenic 90.0%
! TCGCGGCGGCGCCGCCGCAC+CGG + contig435end:5183-5202 MsG0080048775.01.T01:intron 90.0%
Chromosome Type Strat End Strand Name
contig435end gene 2556 15802 2556 ID=MsG0080048775.01;
contig435end mRNA 2556 15802 2556 ID=MsG0080048775.01.T01;Parent=MsG0080048775.01
contig435end exon 2556 2669 2556 ID=MsG0080048775.01.T01.exon;Parent=MsG0080048775.01.T01
contig435end CDS 2645 2669 2645 ID=MsG0080048775.01.T01.cds;Parent=MsG0080048775.01.T01
contig435end CDS 3098 3145 3098 ID=MsG0080048775.01.T01.cds;Parent=MsG0080048775.01.T01
contig435end exon 3098 3145 3098 ID=MsG0080048775.01.T01.exon;Parent=MsG0080048775.01.T01
contig435end CDS 3621 3649 3621 ID=MsG0080048775.01.T01.cds;Parent=MsG0080048775.01.T01
contig435end exon 3621 3649 3621 ID=MsG0080048775.01.T01.exon;Parent=MsG0080048775.01.T01
contig435end CDS 5708 5735 5708 ID=MsG0080048775.01.T01.cds;Parent=MsG0080048775.01.T01
contig435end exon 5708 5735 5708 ID=MsG0080048775.01.T01.exon;Parent=MsG0080048775.01.T01
contig435end CDS 6967 7022 6967 ID=MsG0080048775.01.T01.cds;Parent=MsG0080048775.01.T01
contig435end exon 6967 7022 6967 ID=MsG0080048775.01.T01.exon;Parent=MsG0080048775.01.T01
contig435end CDS 7530 7654 7530 ID=MsG0080048775.01.T01.cds;Parent=MsG0080048775.01.T01
contig435end exon 7530 7654 7530 ID=MsG0080048775.01.T01.exon;Parent=MsG0080048775.01.T01
contig435end CDS 10365 11127 10365 ID=MsG0080048775.01.T01.cds;Parent=MsG0080048775.01.T01
contig435end exon 10365 11127 10365 ID=MsG0080048775.01.T01.exon;Parent=MsG0080048775.01.T01
contig435end CDS 11617 12081 11617 ID=MsG0080048775.01.T01.cds;Parent=MsG0080048775.01.T01
contig435end exon 11617 12081 11617 ID=MsG0080048775.01.T01.exon;Parent=MsG0080048775.01.T01
contig435end CDS 12183 13251 12183 ID=MsG0080048775.01.T01.cds;Parent=MsG0080048775.01.T01
contig435end exon 12183 13251 12183 ID=MsG0080048775.01.T01.exon;Parent=MsG0080048775.01.T01
contig435end CDS 14700 15673 14700 ID=MsG0080048775.01.T01.cds;Parent=MsG0080048775.01.T01
contig435end exon 14700 15802 14700 ID=MsG0080048775.01.T01.exon;Parent=MsG0080048775.01.T01
Gene Sequence

>MsG0080048775.01.T01

ATGTGGAAGAAGAAAGAAAACTCGGTCCAATCATCTCCATACTTCTTCATTTTCTCGTTCCTTTCTCTTGAGTTTACGTGGCCACCAGAGAGGAGTCAAGAGTTCTCCCCCAACAGCGCTAAAGACACGTTGAGCAGCCTTCTTGGGGAAAATACATCATCAACCCTTGGGCTAAATTTAAATCTGAATACACTAGTGCATATTAAGTTGTGTAGGGGCATTTTGGACTTTTACTTTGAAAGTGAGCAAAACCGTTTGGGTAAAGAGCAGAATTCGAAGGAGTACAGTGCACGTCGCATGTATCCATCGAATTCCCAATCAGATGAAAAACATAAAATTCTCGAAAAACTTCAAATTCTCGCTCACATTTCGTTTCTATGCGTTTCGCATCCGAGAAAGGTTTTTGATTTTTCTGATTTGCTACCTGGAGTTCAAGCATTGCATGATAATTTGATTGTTTTGGAAGCGGATTCGATTTTGTCTTCGGGGATTGAGACTATATGTGAAGAATGGTGGAAGGAGAATTTACCGGAGCGCGAATCGTTGATTTCTCAGACATTACCTTTTGTTCTATCGAGATCGTTGACATTGAAGAAAAAAGTGGATGTGCATAGGGTTTATATGTTTCGCGAGGCCTTCGCGTTGTTTGACTTCGAAGATGAGAGTATCGAGGATTTGAAACTGTTGTTAAACAGGTGTGTAATTTCGCCTTTATATTTGAAAACAGAAGATGGAAGAAAGTTTCTGGCTTTTTTGTTTGGGTTGAGTGATCAGCTTGGGAAGGAGCTTTTGGCGATGATTCGTTCGCAGATTCCCTATGGACGGAAGTCGATGTTGGAGGCTTATGGGGATATATTGTTTCGAGCATGGAAAGCTGTGCCAGAAGATTCAAGGAGTGGAATTGAGAATGGGTTCTTGCAGGATTTGATTGAGGGTTCTATCCATGCAAGTTCTGGAACTTTTGCTTTGTATATTAGAAGGGTTTTGGGAGGGTTTATTAATCAGAGGACCGTTGATGGGGTTGAGAAACTACTCTATCGACTTGCCGAGCCAGTCATATTTCGGTCTCTGCAGGCTGCAAACTCAAATGTTCGACAGAATGCTTTGCATCTGCTTTTGGACATATTCCCCCTTGAAGATCCCGATGCCTCAAAAGAGGATAAGGATACATTGCTTGATAAGCAGTTCTTTTTGTTAGAAAAGTTGCTTGTTGACGATTGTCCAGAAGTTAGAACAATTGCTGTTGAGGGTTCTTGTCGTGTCCTTCATCTATTTTGGGAAATTATTCCGTCACCAATTATAACAAAGATGCTTACAAAAGTAATTAGTGACATGTCTCATGATGTATGCAACGAGGTAAGGCTTTCTACGTTGAATGGCATCATTTATTTGCTTGACAATCCCCACTCTCATGAAGTCCTTAAGGTGCTCTGTCCAAGACTGGGTCACTTAATGCTGGATAATGTCCTCACAGTACAAGTTGCTATGGCAGAGCTCTTGCTCCATCTAAATGATATTCAAAATTTTCAGTTTAACAAGGTGGTGGTTCTCGATGTGCTTTTGTCTGTGCTTGCCAGTGATCAACCTCCTGTAGCTCAGAAGCTAACAAAACTGCTTATACCTTCGTACTTTCCCTCAATAGTGCCCATTGAGGAGGCATGTAATCGCTGCATTACACTAGTAAAAAGGTCTCCAATGGCCGGTGCAATATTTTGCAAGTATGCCATCTCGGAAGGAGCGTCTAAAACTCATCTTATGGAACTGGTCAAAGCATTCTTGAGTTTGGTTTTGTCACAAGATAAGCTGAATGCAGATCAGATAGAGGGCTTTCTTATTGCTGCTAGCTATCTTTGTGATAACTTAGTCAGTGAACCATGCTATATGGATGCCCTCAAAGAGTTACTTACTGCAGAGAAAGTGGAAGGTTTACTAACTGGGGCATCTACAGAACAAGCTCAATCATCTTTATTCAACATTTTCTCCACTGTTTGTCCAGATAATGTGGCAGGACTTCTTGAAGAGTGCATGAGTGTTGTCACAAACTGCCATGGTTTACCTGAAGATGTTGATCGCCAATCTAAAATTAGGTCTGCACATAAGTTGTTGCTTTCTTTGGGAGGTTTTGATGACATGTTTGAAGCCTTAACAACCCTGCTGCATAAGGCTGCCTATCGTTGTCACATTAAATTTGGGGCAGACATGCCATCCCACAGTGTTACAGCTACTAAAAGGAAAAAATCTAAATCCTCTGGAAAATTTTCAATTAAATCGAAGATAATTAACAGAAAGCAATCTTTTGAAGATGATTATTTAGTAGCTGTAGGAGTTGCATGGCAAGTTAGAGACTTGCTTCAGCATGAGGATACCAGGAAAGCAATCTTTAGATCTCAACCTTTAGAAATGTTGTTTTTTTCGCTTAAGATGGTATCTGAAGTCAGCATTGAGCATTGTGGGCAGTATGAATACATAGACATATCTCCTGTTTTGGCATATATGACCCTTGCTCTGCAAATGACGGTTGATAATGTTGGCACAAGTAGTGAAAAGAATGGTGATTCCAAAGGGAAGAAAACTAAGATTGATTCTTCTACATTACTTTCAGAGGCAAGATCTGTACACAATGAACCTCAACAAGTGCTTTGTAAGGTGAAGATGATTACTGCTGTTCTGAAGTTCATGGCTGATGCCACTGCCATGTGTTTTGCTCCTCACAACAATGGATTATTCTTGAATAATACCTCAAAATGCATACAACATATCTTGTCTTCATTGAACCGGCTGTATCATCACAGAATTGAATTTGAGGAAGAGGATAAAAAAAATACTATATTTTGCCTGAAAAGCTCTTTCAGCTATGCTGCAAAAATACTCAATGTGATACTGACTGATTCCGGTGGATCCTCCATAATGACATCAAAAGCCTTCACTCTTGCCAATAACTTGCTTGATTTAATTGTTTCAACTGAATCATGTTTGGGCTCTGCATATGCATCACGTCTTGTTGCAGCCGCAAAGCCTTGGCTGCCTGATGTAGTTTTGGCACTGGGATCTGAAAGTGTTCTACAACACACCGAAAGTGGAAGTGAACATTTAACTGCTTCTGAACAAATGAAGTTACAATTTCCAAAATGGCCCTTGATTGTAGCCAAAACTGTGCTCTCTGCAGTGAATGAAGGTGAAGGAGATGGTGAATGCTCTCAACCAGATAAATTCTCGACATTCAATAAACTTACGGCTATGCTGGTTATATTACTTAAAAAGAATAAGAGTATAATGGATGCAGTTGGGGATATTTTCTTGGTTTGTTCACTTGTTGGGCTAGAACAAAAGGACTTTGAGCTGGCATTAGGACTCTTGCAGTTTGTATGTTCCAAGTTGTTTAATCGTGATGACAGGGATTGGGGTGACATGATGTTATCTTCTCTGGAAGAAATCTATCATAAGATAGAGAGGCAAATTACAGAAGCTAGTAATAACGATGAACTGGAGAAATTGATGCATGTAAAGGGGTTGCTTGAACCTCTTTGGACGTATCATCTATATGAAACTGGAAAGGTCAACATGACTGATGACTATAATTAG

Protein sequence

>MsG0080048775.01.T01

MWKKKENSVQSSPYFFIFSFLSLEFTWPPERSQEFSPNSAKDTLSSLLGENTSSTLGLNLNLNTLVHIKLCRGILDFYFESEQNRLGKEQNSKEYSARRMYPSNSQSDEKHKILEKLQILAHISFLCVSHPRKVFDFSDLLPGVQALHDNLIVLEADSILSSGIETICEEWWKENLPERESLISQTLPFVLSRSLTLKKKVDVHRVYMFREAFALFDFEDESIEDLKLLLNRCVISPLYLKTEDGRKFLAFLFGLSDQLGKELLAMIRSQIPYGRKSMLEAYGDILFRAWKAVPEDSRSGIENGFLQDLIEGSIHASSGTFALYIRRVLGGFINQRTVDGVEKLLYRLAEPVIFRSLQAANSNVRQNALHLLLDIFPLEDPDASKEDKDTLLDKQFFLLEKLLVDDCPEVRTIAVEGSCRVLHLFWEIIPSPIITKMLTKVISDMSHDVCNEVRLSTLNGIIYLLDNPHSHEVLKVLCPRLGHLMLDNVLTVQVAMAELLLHLNDIQNFQFNKVVVLDVLLSVLASDQPPVAQKLTKLLIPSYFPSIVPIEEACNRCITLVKRSPMAGAIFCKYAISEGASKTHLMELVKAFLSLVLSQDKLNADQIEGFLIAASYLCDNLVSEPCYMDALKELLTAEKVEGLLTGASTEQAQSSLFNIFSTVCPDNVAGLLEECMSVVTNCHGLPEDVDRQSKIRSAHKLLLSLGGFDDMFEALTTLLHKAAYRCHIKFGADMPSHSVTATKRKKSKSSGKFSIKSKIINRKQSFEDDYLVAVGVAWQVRDLLQHEDTRKAIFRSQPLEMLFFSLKMVSEVSIEHCGQYEYIDISPVLAYMTLALQMTVDNVGTSSEKNGDSKGKKTKIDSSTLLSEARSVHNEPQQVLCKVKMITAVLKFMADATAMCFAPHNNGLFLNNTSKCIQHILSSLNRLYHHRIEFEEEDKKNTIFCLKSSFSYAAKILNVILTDSGGSSIMTSKAFTLANNLLDLIVSTESCLGSAYASRLVAAAKPWLPDVVLALGSESVLQHTESGSEHLTASEQMKLQFPKWPLIVAKTVLSAVNEGEGDGECSQPDKFSTFNKLTAMLVILLKKNKSIMDAVGDIFLVCSLVGLEQKDFELALGLLQFVCSKLFNRDDRDWGDMMLSSLEEIYHKIERQITEASNNDELEKLMHVKGLLEPLWTYHLYETGKVNMTDDYN*