AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005381.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005381.01.T01 MTR_4g130640 86.928 153 17 2 190 339 1 153 6.20e-90 266
MsG0180005381.01.T01 MTR_1g098440 90.741 54 5 0 132 185 1 54 1.33e-26 100
MsG0180005381.01.T01 MTR_7g069410 45.033 151 41 5 190 339 1 110 3.89e-26 100
MsG0180005381.01.T01 MTR_4g116100 85.185 54 8 0 110 163 30 83 1.30e-23 96.7
MsG0180005381.01.T01 MTR_6g037640 64.865 74 22 2 111 182 31 102 5.37e-23 92.8
MsG0180005381.01.T01 MTR_7g031710 70.270 37 11 0 302 338 42 78 3.27e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005381.01.T01 AT3G59280 57.500 80 32 1 111 188 31 110 1.54e-23 94.4
MsG0180005381.01.T01 AT3G59280 57.500 80 32 1 111 188 31 110 2.16e-23 94.0
MsG0180005381.01.T01 AT5G61880 55.405 74 29 3 111 182 31 102 1.21e-15 72.8
MsG0180005381.01.T01 AT5G61880 55.405 74 29 3 111 182 31 102 1.21e-15 72.8
MsG0180005381.01.T01 AT5G61880 55.405 74 29 3 111 182 20 91 2.00e-15 71.6

Find 98 sgRNAs with CRISPR-Local

Find 541 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTTGAAAAGAAATAAAA+TGG 0.207796 1:+91058622 MsG0180005381.01.T01:CDS
GAAATAAAATGGATCGAAAA+AGG 0.213477 1:+91058633 MsG0180005381.01.T01:CDS
CATCATGTTCTGAGAGAAAT+TGG 0.219553 1:+91058579 MsG0180005381.01.T01:CDS
CTAGTAACACTTTCTTCTAT+TGG 0.245408 1:-91058359 None:intergenic
TAGTGGTTTACTATCATCTT+GGG 0.287206 1:-91058402 None:intergenic
CAAGAGGACGGAAGGCATTC+CGG 0.293723 1:+91052249 MsG0180005381.01.T01:intron
TTCCTTGGCTCGATAGAGTT+TGG 0.297164 1:-91054696 None:intergenic
CGGAAAAGGCCAATGGTAAT+TGG 0.298510 1:+91052308 MsG0180005381.01.T01:CDS
AAGTTATGTACTGTTATAAA+AGG 0.298775 1:-91058904 None:intergenic
ATCATCAACACTACCCAAAA+AGG 0.302470 1:-91058854 None:intergenic
AAGAGGACGGAAGGCATTCC+GGG 0.318867 1:+91052250 MsG0180005381.01.T01:intron
GACATGGCTTGTGGAATTAC+CGG 0.352990 1:+91052288 MsG0180005381.01.T01:CDS
CTCGATAGAGTTTGGATTGA+AGG 0.356016 1:-91054688 None:intergenic
TTTCACTTATTGAAAATTGC+TGG 0.358067 1:+91058533 MsG0180005381.01.T01:CDS
CTCCATAGTCGTACCATTCC+CGG 0.368851 1:-91052185 None:intergenic
GAAGAGGCTCGACTGATTCT+TGG 0.385499 1:+91054503 MsG0180005381.01.T01:CDS
ATTGGAGGCAAGTGAATCTT+CGG 0.414209 1:+91052326 MsG0180005381.01.T01:CDS
AATTGCTGGTGAAGGAGTTC+AGG 0.416502 1:+91058547 MsG0180005381.01.T01:CDS
TTCGATTGTGCTAGGATGAC+CGG 0.417799 1:-91051954 None:intergenic
TGAGTTATCTTTAGATGAAC+CGG 0.418024 1:+91058709 MsG0180005381.01.T01:CDS
GCTACAATGTTCTTTGATGA+TGG 0.418641 1:+91058740 MsG0180005381.01.T01:CDS
CTGCAGGTGGAAACAAGCTT+TGG 0.435890 1:+91058459 MsG0180005381.01.T01:CDS
TAGAAGAAAGTGTTACTAGT+TGG 0.440821 1:+91058363 MsG0180005381.01.T01:CDS
CATCTCCAAGATGCAACCTT+TGG 0.444529 1:-91051874 None:intergenic
AACATTGTAGCCTCCAACTC+CGG 0.456994 1:-91058728 None:intergenic
ATAGTGGTTTACTATCATCT+TGG 0.457884 1:-91058403 None:intergenic
TTTCCTTCTTCGATTGTGCT+AGG 0.461169 1:-91051962 None:intergenic
GCTTGTGGAATTACCGGAAA+AGG 0.475152 1:+91052294 MsG0180005381.01.T01:CDS
GGATTGAAGGTAAAAGCTCT+TGG 0.475793 1:-91054675 None:intergenic
ATCTTTAGATGAACCGGAGT+TGG 0.478188 1:+91058715 MsG0180005381.01.T01:CDS
GTAACACTTTCTTCTATTGG+AGG 0.479958 1:-91058356 None:intergenic
GCATAGTGTGTGTACGCATT+CGG 0.481488 1:+91052118 MsG0180005381.01.T01:CDS
AAGATGATAGTAAACCACTA+TGG 0.482539 1:+91058405 MsG0180005381.01.T01:CDS
CACTTGCCTCCAATTACCAT+TGG 0.484706 1:-91052317 None:intergenic
GAAGGTTGAGGTTTCGAAGC+CGG 0.486375 1:+91051935 MsG0180005381.01.T01:CDS
TTGGAGGCAAGTGAATCTTC+GGG 0.492071 1:+91052327 MsG0180005381.01.T01:CDS
AAGTGAATCTTCGGGAGGAC+GGG 0.493055 1:+91052335 MsG0180005381.01.T01:CDS
GAGAGCCTCTAGAAATTCCT+TGG 0.493454 1:-91054711 None:intergenic
CAAAATGATGACAGTGGAAG+AGG 0.495232 1:+91054487 MsG0180005381.01.T01:CDS
AGGACGGGTTTGATCACTCC+GGG 0.495547 1:+91052350 MsG0180005381.01.T01:CDS
TTTAGATGAACCGGAGTTGG+AGG 0.500804 1:+91058718 MsG0180005381.01.T01:CDS
ACCATAACCTCTTCGGCCCC+CGG 0.502147 1:-91052368 None:intergenic
CATGGTTCAATGGAAGTGTA+TGG 0.502499 1:+91051905 MsG0180005381.01.T01:CDS
AACCTTTACAATATCTTCCC+AGG 0.507196 1:-91054543 None:intergenic
AGCCTACACCATAACCTCTT+CGG 0.508089 1:-91052375 None:intergenic
TGGAAGCAAGCATGGTTCAA+TGG 0.508875 1:+91051895 MsG0180005381.01.T01:CDS
CAAAGGTTGCATCTTGGAGA+TGG 0.510551 1:+91051875 MsG0180005381.01.T01:CDS
ATGTTCTTTGATGATGGAAA+CGG 0.513119 1:+91058746 MsG0180005381.01.T01:CDS
TATGGAAGCATTGAAGGTTG+AGG 0.516131 1:+91051923 MsG0180005381.01.T01:CDS
GAAGTGTATGGAAGCATTGA+AGG 0.518342 1:+91051917 MsG0180005381.01.T01:CDS
GTGCATACTAATGTTGGAGT+TGG 0.524300 1:+91058674 MsG0180005381.01.T01:CDS
CTTGGAGATGGAAGCAAGCA+TGG 0.529630 1:+91051887 MsG0180005381.01.T01:CDS
CATCCTAGCACAATCGAAGA+AGG 0.530235 1:+91051959 MsG0180005381.01.T01:CDS
GTTTATGTGCATACTAATGT+TGG 0.532305 1:+91058668 MsG0180005381.01.T01:CDS
TCCTCTGAAGTAGTGAATGT+TGG 0.537803 1:+91058797 MsG0180005381.01.T01:CDS
CAAGTGAATCTTCGGGAGGA+CGG 0.550715 1:+91052334 MsG0180005381.01.T01:CDS
AGAGGCTCTCCAACGAGACA+AGG 0.553646 1:+91054724 MsG0180005381.01.T01:CDS
GTCAAACATTCTTCAACCCC+CGG 0.554070 1:-91052268 None:intergenic
GGAGTTGATGACACCGGGAA+TGG 0.556186 1:+91052172 MsG0180005381.01.T01:CDS
GGGTACCAAAGGTTGCATCT+TGG 0.564955 1:+91051869 MsG0180005381.01.T01:CDS
AGTGGTTTACTATCATCTTG+GGG 0.567164 1:-91058401 None:intergenic
GATGCAACCTTTGGTACCCA+TGG 0.567597 1:-91051865 None:intergenic
AGAGGAAACACGGATTGTAT+CGG 0.567785 1:-91058780 None:intergenic
AGGGGTGACCCTTGTCTCGT+TGG 0.568317 1:-91054733 None:intergenic
AAAAGGCCAATGGTAATTGG+AGG 0.570674 1:+91052311 MsG0180005381.01.T01:CDS
GGACGGGTTTGATCACTCCG+GGG 0.575305 1:+91052351 MsG0180005381.01.T01:CDS
AGAGGACGGAAGGCATTCCG+GGG 0.575777 1:+91052251 MsG0180005381.01.T01:intron
AGAGAAAGCTCAACTTGAGG+TGG 0.581164 1:+91052151 MsG0180005381.01.T01:CDS
TTATTGAAAATTGCTGGTGA+AGG 0.583272 1:+91058539 MsG0180005381.01.T01:CDS
AGAATGTTTGACATGGCTTG+TGG 0.588237 1:+91052279 MsG0180005381.01.T01:CDS
ATCCTGGGAAGATATTGTAA+AGG 0.589380 1:+91054541 MsG0180005381.01.T01:CDS
ATCCAAACTCTATCGAGCCA+AGG 0.595430 1:+91054694 MsG0180005381.01.T01:CDS
GTGTGCACCATGGGTACCAA+AGG 0.596857 1:+91051858 None:intergenic
TTCTTTGATGATGGAAACGG+AGG 0.597380 1:+91058749 MsG0180005381.01.T01:CDS
GCGTGACAGAGAAAACATCC+TGG 0.601429 1:+91054525 MsG0180005381.01.T01:CDS
GTGCAGAATAATGATTCTGC+AGG 0.611185 1:+91058443 MsG0180005381.01.T01:CDS
GAATTCTTCAAGAGGACGGA+AGG 0.613957 1:+91052241 MsG0180005381.01.T01:intron
CAGAATAATGATTCTGCAGG+TGG 0.615421 1:+91058446 MsG0180005381.01.T01:CDS
CGTGACAGAGAAAACATCCT+GGG 0.620131 1:+91054526 MsG0180005381.01.T01:CDS
GGGTTGAAGAATGTTTGACA+TGG 0.620742 1:+91052272 MsG0180005381.01.T01:CDS
TGATGATGGAAACGGAGGAG+AGG 0.621097 1:+91058754 MsG0180005381.01.T01:CDS
TCCAACATTCACTACTTCAG+AGG 0.626874 1:-91058798 None:intergenic
TCACTACTTCAGAGGAAACA+CGG 0.630269 1:-91058790 None:intergenic
GAATTACCGGAAAAGGCCAA+TGG 0.636682 1:+91052301 MsG0180005381.01.T01:CDS
GTGTACGCATTCGGAAGTTG+AGG 0.639418 1:+91052127 MsG0180005381.01.T01:CDS
GAGGTGGAGTTGATGACACC+GGG 0.639827 1:+91052167 MsG0180005381.01.T01:CDS
TGAGGTGGAGTTGATGACAC+CGG 0.642239 1:+91052166 MsG0180005381.01.T01:CDS
ATACAAAATGCGGTCCATAG+AGG 0.647531 1:+91054461 MsG0180005381.01.T01:CDS
GCAAGAGACAATACAAAATG+CGG 0.650071 1:+91054451 MsG0180005381.01.T01:CDS
GAGGACGGGTTTGATCACTC+CGG 0.651373 1:+91052349 MsG0180005381.01.T01:CDS
TCGAGCCAAGGAATTTCTAG+AGG 0.651833 1:+91054706 MsG0180005381.01.T01:CDS
AGGAAGCAAAATGATGACAG+TGG 0.652596 1:+91054481 MsG0180005381.01.T01:CDS
ACAGTGACAAATCTCCATAG+TGG 0.653867 1:-91058419 None:intergenic
GAGGCTCTCCAACGAGACAA+GGG 0.653926 1:+91054725 MsG0180005381.01.T01:CDS
GAGGACGGAAGGCATTCCGG+GGG 0.686899 1:+91052252 MsG0180005381.01.T01:intron
GACGGGTTTGATCACTCCGG+GGG 0.688220 1:+91052352 MsG0180005381.01.T01:CDS
GAGGCAAGTGAATCTTCGGG+AGG 0.701887 1:+91052330 MsG0180005381.01.T01:CDS
GGTAGAGAAAGCTCAACTTG+AGG 0.716220 1:+91052148 MsG0180005381.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGAAAAAATAAATCTA+GGG - Chr1:91058277-91058296 None:intergenic 10.0%
!! TAAAAAGAAAAAATAAATCT+AGG - Chr1:91058278-91058297 None:intergenic 10.0%
!!! AATATAAATTTTACTTTTCA+AGG - Chr1:91056061-91056080 None:intergenic 10.0%
!!! ATATAAATTTTACTTTTCAA+GGG - Chr1:91056060-91056079 None:intergenic 10.0%
!!! ATGAATTTATTTTTCTTAAA+TGG - Chr1:91056203-91056222 None:intergenic 10.0%
!!! ATTTTTTTAATCTAAATAAG+TGG - Chr1:91055689-91055708 None:intergenic 10.0%
!!! CATATATGATTTTTTTTTTT+TGG + Chr1:91055136-91055155 MsG0180005381.01.T01:intron 10.0%
!!! TTTGAAATAAATCATTAATA+TGG + Chr1:91054990-91055009 MsG0180005381.01.T01:intron 10.0%
!! AACTAAAAAACAAAATATTG+AGG + Chr1:91056528-91056547 MsG0180005381.01.T01:intron 15.0%
!! AATAATAAAACATTAACAAG+AGG - Chr1:91058314-91058333 None:intergenic 15.0%
!! ACTAAAAAACAAAATATTGA+GGG + Chr1:91056529-91056548 MsG0180005381.01.T01:intron 15.0%
!! AGTGCATATTTAATTATTAA+GGG - Chr1:91056120-91056139 None:intergenic 15.0%
!! ATAACAATGTAGTAAATAAA+TGG - Chr1:91057159-91057178 None:intergenic 15.0%
!! TAGTGCATATTTAATTATTA+AGG - Chr1:91056121-91056140 None:intergenic 15.0%
!! TTAATTAAAATCTCATTGTA+TGG - Chr1:91054880-91054899 None:intergenic 15.0%
!! TTCAAAGTCTATTATAAAAT+AGG - Chr1:91056374-91056393 None:intergenic 15.0%
!! TTCAATTACAAATTAAATGT+AGG - Chr1:91055518-91055537 None:intergenic 15.0%
!! TTGTTGTATATTATTTACTT+GGG - Chr1:91055434-91055453 None:intergenic 15.0%
!! TTTCTAATATATCAATTGAT+AGG + Chr1:91056989-91057008 MsG0180005381.01.T01:intron 15.0%
!!! AATTTATTTTTCTTAAATGG+TGG - Chr1:91056200-91056219 None:intergenic 15.0%
!!! ATCTTTGAAAAGAAATAAAA+TGG + Chr1:91058622-91058641 MsG0180005381.01.T01:CDS 15.0%
!!! ATTACAATATTTTGATGTAA+TGG + Chr1:91053795-91053814 MsG0180005381.01.T01:intron 15.0%
!!! GTTTAATTTTGATACATTTT+CGG - Chr1:91055219-91055238 None:intergenic 15.0%
!!! TTAAAGTTAAACATTTTCAA+TGG - Chr1:91055095-91055114 None:intergenic 15.0%
!!! TTTTTCAGTCAAAATATTAA+TGG - Chr1:91056733-91056752 None:intergenic 15.0%
!! AAATAAAATGGATCGAAAAA+GGG + Chr1:91058634-91058653 MsG0180005381.01.T01:CDS 20.0%
!! AAGTTATGTACTGTTATAAA+AGG - Chr1:91058907-91058926 None:intergenic 20.0%
!! AATATATCAATTGATAGGAA+AGG + Chr1:91056994-91057013 MsG0180005381.01.T01:intron 20.0%
!! ATAAGAATATGACAAGATAA+AGG - Chr1:91054393-91054412 None:intergenic 20.0%
!! ATATTTAATTATTAAGGGAG+AGG - Chr1:91056115-91056134 None:intergenic 20.0%
!! GAGTTTATTATATTATGTGT+AGG - Chr1:91055464-91055483 None:intergenic 20.0%
!! GATATATTAGAAATATTACG+TGG + Chr1:91057116-91057135 MsG0180005381.01.T01:intron 20.0%
!! GTTGTTGTATATTATTTACT+TGG - Chr1:91055435-91055454 None:intergenic 20.0%
!! TAAGAATATGACAAGATAAA+GGG - Chr1:91054392-91054411 None:intergenic 20.0%
!! TATAATAAACTCAAAGTGAT+CGG + Chr1:91055472-91055491 MsG0180005381.01.T01:intron 20.0%
!! TATTTAATTATTAAGGGAGA+GGG - Chr1:91056114-91056133 None:intergenic 20.0%
!! TGAAACTTAACAAAATTAGA+TGG - Chr1:91056850-91056869 None:intergenic 20.0%
!! TTACTAAAGACAATAAAGTA+TGG - Chr1:91056316-91056335 None:intergenic 20.0%
!! TTCGAAAAAAATAGTATTGT+TGG - Chr1:91056471-91056490 None:intergenic 20.0%
!! TTCTTCTTATAAAATGTAGT+CGG - Chr1:91057899-91057918 None:intergenic 20.0%
!!! AGTGTATATTTTAACATAAG+AGG + Chr1:91056660-91056679 MsG0180005381.01.T01:intron 20.0%
!!! AGTGTATATTTTAACATAAG+AGG - Chr1:91056679-91056660 None:intergenic 20.0%
!!! ATTAGTTTTTTTCTTGTTAC+GGG + Chr1:91054158-91054177 MsG0180005381.01.T01:intron 20.0%
!!! CACAATTTTTCTAATATTCA+TGG - Chr1:91057068-91057087 None:intergenic 20.0%
!!! GATTAGTTTTTTTCTTGTTA+CGG + Chr1:91054157-91054176 MsG0180005381.01.T01:intron 20.0%
!!! GTGTATATTTTAACATAAGA+GGG + Chr1:91056661-91056680 MsG0180005381.01.T01:intron 20.0%
!!! GTGTATATTTTAACATAAGA+GGG - Chr1:91056680-91056661 None:intergenic 20.0%
!!! TAATATGTTTTGAATAAGAG+AGG + Chr1:91056632-91056651 MsG0180005381.01.T01:intron 20.0%
!!! TCTGAACATTTTTCTTTTAT+TGG - Chr1:91054014-91054033 None:intergenic 20.0%
!!! TGTATATTTTAACATAAGAG+GGG + Chr1:91056662-91056681 MsG0180005381.01.T01:intron 20.0%
!!! TTCAATTTTGCTAATGTATT+AGG + Chr1:91053957-91053976 MsG0180005381.01.T01:intron 20.0%
!!! TTTTCTTTTATTGGATTCAA+TGG - Chr1:91054005-91054024 None:intergenic 20.0%
! AAAATCAACCAATTGAAACT+TGG - Chr1:91055894-91055913 None:intergenic 25.0%
! AAATCAACCAATTGAAACTT+GGG - Chr1:91055893-91055912 None:intergenic 25.0%
! AAGAGAAAAGAAGATATTCA+AGG - Chr1:91058161-91058180 None:intergenic 25.0%
! AATTTGTAATTGAATGAAGC+CGG + Chr1:91055524-91055543 MsG0180005381.01.T01:intron 25.0%
! AGAAGAATAATAAGTAGTAG+TGG + Chr1:91057912-91057931 MsG0180005381.01.T01:intron 25.0%
! AGAGAAAAGAAGATATTCAA+GGG - Chr1:91058160-91058179 None:intergenic 25.0%
! ATAAAACATTAACAAGAGGT+TGG - Chr1:91058310-91058329 None:intergenic 25.0%
! ATCTCTTGAAGCATAAAAAA+TGG + Chr1:91056939-91056958 MsG0180005381.01.T01:intron 25.0%
! CAAAATATTAATGGAGAAGT+AGG - Chr1:91056724-91056743 None:intergenic 25.0%
! CAATTAAACATTAGAAGAGA+AGG - Chr1:91053877-91053896 None:intergenic 25.0%
! CTTAACAAAATTAGATGGAA+TGG - Chr1:91056845-91056864 None:intergenic 25.0%
! CTTCTCTTCTAATGTTTAAT+TGG + Chr1:91053875-91053894 MsG0180005381.01.T01:intron 25.0%
! GAAATAAAATGGATCGAAAA+AGG + Chr1:91058633-91058652 MsG0180005381.01.T01:CDS 25.0%
! TACAAACATGGTATATAATC+AGG - Chr1:91054825-91054844 None:intergenic 25.0%
! TACTCAAGATAATAAACTTG+AGG - Chr1:91055981-91056000 None:intergenic 25.0%
! TCTTACAAAGAGATACAAAT+GGG - Chr1:91053322-91053341 None:intergenic 25.0%
! TGAAGATAAACCAATCTTTA+GGG + Chr1:91057567-91057586 MsG0180005381.01.T01:intron 25.0%
! TTACCAATCTATAACTTATC+AGG - Chr1:91054080-91054099 None:intergenic 25.0%
! TTCTTACAAAGAGATACAAA+TGG - Chr1:91053323-91053342 None:intergenic 25.0%
! TTGAAGATAAACCAATCTTT+AGG + Chr1:91057566-91057585 MsG0180005381.01.T01:intron 25.0%
! TTTAAATTACCGATACGTAT+CGG + Chr1:91057750-91057769 MsG0180005381.01.T01:intron 25.0%
! TTTCACTTATTGAAAATTGC+TGG + Chr1:91058533-91058552 MsG0180005381.01.T01:CDS 25.0%
!! AAACATTGATGATACAAACA+TGG - Chr1:91054837-91054856 None:intergenic 25.0%
!! ACAACAAGTTGAAGAAAATT+AGG - Chr1:91056896-91056915 None:intergenic 25.0%
!! ATTTGAGCAATTGAGATTTT+TGG - Chr1:91055952-91055971 None:intergenic 25.0%
!! CAACAAGTTGAAGAAAATTA+GGG - Chr1:91056895-91056914 None:intergenic 25.0%
!! GAATATTCAACAATCCATTT+TGG - Chr1:91054967-91054986 None:intergenic 25.0%
!! GACATGAAATTTTATAAGAC+TGG + Chr1:91054220-91054239 MsG0180005381.01.T01:intron 25.0%
!! TCTTTATCTTGTTTATTCCT+TGG + Chr1:91053444-91053463 MsG0180005381.01.T01:intron 25.0%
!! TTTGAGCAATTGAGATTTTT+GGG - Chr1:91055951-91055970 None:intergenic 25.0%
!! TTTTAGATACTAAAGGTTGA+GGG + Chr1:91052940-91052959 MsG0180005381.01.T01:intron 25.0%
!! TTTTCTAATATTCATGGCAA+AGG - Chr1:91057062-91057081 None:intergenic 25.0%
!!! AAATTTTACTTTTCAAGGGA+GGG - Chr1:91056056-91056075 None:intergenic 25.0%
!!! AAGTTTCAATTGGTTGATTT+TGG + Chr1:91055893-91055912 MsG0180005381.01.T01:intron 25.0%
!!! ACTTAAAAGTATTAAGCAGT+GGG + Chr1:91054293-91054312 MsG0180005381.01.T01:intron 25.0%
!!! AGTGTAGATTTTAACATAAG+AGG + Chr1:91056557-91056576 MsG0180005381.01.T01:intron 25.0%
!!! AGTGTTGATGATGATTTTTT+TGG + Chr1:91058865-91058884 MsG0180005381.01.T01:three_prime_UTR 25.0%
!!! ATCCATGTTTTTTAGAATGA+GGG - Chr1:91057952-91057971 None:intergenic 25.0%
!!! ATTTTAACATAAGAGGGAAA+GGG - Chr1:91056025-91056044 None:intergenic 25.0%
!!! ATTTTTTATGCTTCAAGAGA+TGG - Chr1:91056940-91056959 None:intergenic 25.0%
!!! CTCATTTTGAGTAATTTGAA+TGG + Chr1:91058952-91058971 MsG0180005381.01.T01:three_prime_UTR 25.0%
!!! CTGATTTTGTTATTTGATAC+TGG + Chr1:91054337-91054356 MsG0180005381.01.T01:intron 25.0%
!!! GTGTAGATTTTAACATAAGA+GGG + Chr1:91056558-91056577 MsG0180005381.01.T01:intron 25.0%
!!! GTTTTTTGACAGAAACAAAA+TGG + Chr1:91055294-91055313 MsG0180005381.01.T01:intron 25.0%
!!! TAAATTTTACTTTTCAAGGG+AGG - Chr1:91056057-91056076 None:intergenic 25.0%
!!! TACTTAAAAGTATTAAGCAG+TGG + Chr1:91054292-91054311 MsG0180005381.01.T01:intron 25.0%
!!! TATTTTAACATAAGAGGGAA+AGG - Chr1:91056026-91056045 None:intergenic 25.0%
!!! TCTTGTGTTTTTTTGTGATT+TGG - Chr1:91055640-91055659 None:intergenic 25.0%
!!! TGTAGATTTTAACATAAGAG+GGG + Chr1:91056559-91056578 MsG0180005381.01.T01:intron 25.0%
!!! TTGTGGTTAATTTTGGTTAT+TGG + Chr1:91053527-91053546 MsG0180005381.01.T01:intron 25.0%
!!! TTTAGGGTTTTAGATACTAA+AGG + Chr1:91052933-91052952 MsG0180005381.01.T01:intron 25.0%
AAACTTGAACTTGATCTATG+TGG + Chr1:91055660-91055679 MsG0180005381.01.T01:intron 30.0%
AAATGGCAAAAAATTGTGCA+AGG - Chr1:91056975-91056956 None:intergenic 30.0%
AAGATCCTTAGTGAAATCAA+AGG + Chr1:91053130-91053149 MsG0180005381.01.T01:intron 30.0%
AAGATGATAGTAAACCACTA+TGG + Chr1:91058405-91058424 MsG0180005381.01.T01:CDS 30.0%
AAGTCCACACAATCTAAATA+AGG - Chr1:91057208-91057227 None:intergenic 30.0%
AATCAACCAATTGAAACTTG+GGG - Chr1:91055892-91055911 None:intergenic 30.0%
ATAACTTATCAGGTAGTGTT+AGG - Chr1:91054070-91054089 None:intergenic 30.0%
ATAAGGCATGGATGTAAATT+AGG - Chr1:91057191-91057210 None:intergenic 30.0%
ATAGTGGTTTACTATCATCT+TGG - Chr1:91058406-91058425 None:intergenic 30.0%
ATAGTTACTGTTGTGAATTC+CGG - Chr1:91053611-91053630 None:intergenic 30.0%
CATTTACACGTCACAATAAA+CGG - Chr1:91054598-91054617 None:intergenic 30.0%
CTACCTGATAAGTTATAGAT+TGG + Chr1:91054074-91054093 MsG0180005381.01.T01:intron 30.0%
CTAGTAACACTTTCTTCTAT+TGG - Chr1:91058362-91058381 None:intergenic 30.0%
CTTTCAATAGGAAACAAACA+CGG + Chr1:91055548-91055567 MsG0180005381.01.T01:intron 30.0%
GAAACAATTGTAAACACCTT+GGG + Chr1:91053195-91053214 MsG0180005381.01.T01:intron 30.0%
GTTTAATTGGAACTCTTTCT+AGG + Chr1:91053888-91053907 MsG0180005381.01.T01:intron 30.0%
GTTTATGTGCATACTAATGT+TGG + Chr1:91058668-91058687 MsG0180005381.01.T01:CDS 30.0%
TAGTGGTTTACTATCATCTT+GGG - Chr1:91058405-91058424 None:intergenic 30.0%
TCAAACAATTGTGAAACTTG+AGG - Chr1:91055921-91055940 None:intergenic 30.0%
TGAGTTATCTTTAGATGAAC+CGG + Chr1:91058709-91058728 MsG0180005381.01.T01:CDS 30.0%
TGTAATTCAAGCATCTTACA+GGG - Chr1:91056090-91056109 None:intergenic 30.0%
TGTGTTATACTTGATCATGT+TGG + Chr1:91053739-91053758 MsG0180005381.01.T01:intron 30.0%
TTAGTGAAATCAAAGGCTAA+GGG + Chr1:91053137-91053156 MsG0180005381.01.T01:intron 30.0%
TTATACTTGATCATGTTGGT+AGG + Chr1:91053743-91053762 MsG0180005381.01.T01:intron 30.0%
TTATTGAAAATTGCTGGTGA+AGG + Chr1:91058539-91058558 MsG0180005381.01.T01:CDS 30.0%
TTGTAAGAACTCATTGATAG+TGG + Chr1:91053334-91053353 MsG0180005381.01.T01:intron 30.0%
TTGTAATTCAAGCATCTTAC+AGG - Chr1:91056091-91056110 None:intergenic 30.0%
! AGCTAAACTATGTCCTTTTT+GGG + Chr1:91058841-91058860 MsG0180005381.01.T01:three_prime_UTR 30.0%
! ATACGATACTTCGTGATTTT+TGG - Chr1:91057652-91057671 None:intergenic 30.0%
! CATTCTAAAAAACATGGATC+TGG + Chr1:91057953-91057972 MsG0180005381.01.T01:intron 30.0%
! GTTGGTTAATTTTGCATACA+AGG - Chr1:91057343-91057362 None:intergenic 30.0%
! TAGCTAAACTATGTCCTTTT+TGG + Chr1:91058840-91058859 MsG0180005381.01.T01:three_prime_UTR 30.0%
! TATATTGTTGTTGTTGCTTG+TGG + Chr1:91053510-91053529 MsG0180005381.01.T01:intron 30.0%
! TATCTTGTTTATTCCTTGGT+TGG + Chr1:91053448-91053467 MsG0180005381.01.T01:intron 30.0%
! TATTCAACAATCCATTTTGG+AGG - Chr1:91054964-91054983 None:intergenic 30.0%
! TGCATATGGTGATGAATTAT+AGG - Chr1:91056809-91056828 None:intergenic 30.0%
! TGTACTATGCCAGAATTTTA+AGG + Chr1:91054037-91054056 MsG0180005381.01.T01:intron 30.0%
! TTGAGCAATTGAGATTTTTG+GGG - Chr1:91055950-91055969 None:intergenic 30.0%
!! AATTTTACTTTTCAAGGGAG+GGG - Chr1:91056055-91056074 None:intergenic 30.0%
!! ATGTTCTTTGATGATGGAAA+CGG + Chr1:91058746-91058765 MsG0180005381.01.T01:CDS 30.0%
!! ATGTTTTGAATAAGAGAGGA+GGG + Chr1:91056636-91056655 MsG0180005381.01.T01:intron 30.0%
!! GTTTTAGATACTAAAGGTTG+AGG + Chr1:91052939-91052958 MsG0180005381.01.T01:intron 30.0%
!! TAGAAGAAAGTGTTACTAGT+TGG + Chr1:91058363-91058382 MsG0180005381.01.T01:CDS 30.0%
!! TATGTTTTGAATAAGAGAGG+AGG + Chr1:91056635-91056654 MsG0180005381.01.T01:intron 30.0%
!! TTGTTGCTTGTGGTTAATTT+TGG + Chr1:91053520-91053539 MsG0180005381.01.T01:intron 30.0%
!!! AATTTGGTGTTTTGGAGTTT+TGG + Chr1:91052613-91052632 MsG0180005381.01.T01:intron 30.0%
!!! ATATTTTAACATAAGAGGGG+AGG + Chr1:91056665-91056684 MsG0180005381.01.T01:intron 30.0%
!!! GATCCATGTTTTTTAGAATG+AGG - Chr1:91057953-91057972 None:intergenic 30.0%
!!! TAGGAAGAATCACTTTTTGA+TGG - Chr1:91056790-91056809 None:intergenic 30.0%
!!! TATTTTAACATAAGAGGGGA+GGG + Chr1:91056666-91056685 MsG0180005381.01.T01:intron 30.0%
!!! TCGTTAGAATTTTGACTTCA+GGG + Chr1:91054248-91054267 MsG0180005381.01.T01:intron 30.0%
!!! TGACTCAAAATTTGGTGTTT+TGG + Chr1:91052605-91052624 MsG0180005381.01.T01:intron 30.0%
!!! TGGTTAATTTTGGTTATTGG+TGG + Chr1:91053530-91053549 MsG0180005381.01.T01:intron 30.0%
!!! TTTTGTTGTTGATGTTGAGA+TGG - Chr1:91058044-91058063 None:intergenic 30.0%
AAACAAACACGGCAAAAAGA+CGG + Chr1:91055559-91055578 MsG0180005381.01.T01:intron 35.0%
AACCTTTACAATATCTTCCC+AGG - Chr1:91054546-91054565 None:intergenic 35.0%
AAGCTTCAAGATGTGAATCT+TGG + Chr1:91052980-91052999 MsG0180005381.01.T01:intron 35.0%
AATCTTGGAGAACCAAAAGA+GGG + Chr1:91052995-91053014 MsG0180005381.01.T01:intron 35.0%
ACACATTGTGAAAACATGCT+TGG - Chr1:91053724-91053743 None:intergenic 35.0%
ACACGTATCGAATGAAGTAT+CGG - Chr1:91057813-91057832 None:intergenic 35.0%
ACATTAGAAGAGAAGGAACA+TGG - Chr1:91053870-91053889 None:intergenic 35.0%
ACATTGTGAAAACATGCTTG+GGG - Chr1:91053722-91053741 None:intergenic 35.0%
ACTGGCACTATATACATAGA+GGG + Chr1:91054355-91054374 MsG0180005381.01.T01:intron 35.0%
AGAGAACATGAAGATGTTGA+TGG - Chr1:91058070-91058089 None:intergenic 35.0%
AGATGTTCATGAGTGATTCT+AGG + Chr1:91055719-91055738 MsG0180005381.01.T01:intron 35.0%
AGCAAAAGCTTCAATACTTG+AGG - Chr1:91054938-91054957 None:intergenic 35.0%
AGTGGTTTACTATCATCTTG+GGG - Chr1:91058404-91058423 None:intergenic 35.0%
ATCAACCAATTGAAACTTGG+GGG - Chr1:91055891-91055910 None:intergenic 35.0%
ATCATCAACACTACCCAAAA+AGG - Chr1:91058857-91058876 None:intergenic 35.0%
ATCCTGGGAAGATATTGTAA+AGG + Chr1:91054541-91054560 MsG0180005381.01.T01:CDS 35.0%
ATGCACTTGGTTTATAGACT+AGG + Chr1:91053485-91053504 MsG0180005381.01.T01:intron 35.0%
ATGTGAATTCTTCAAGAGGA+CGG + Chr1:91052237-91052256 MsG0180005381.01.T01:intron 35.0%
ATTGGTGAGATTGGGAAAAT+GGG + Chr1:91053246-91053265 MsG0180005381.01.T01:intron 35.0%
ATTGGTGTGAAATTTGAGTC+CGG + Chr1:91053589-91053608 MsG0180005381.01.T01:intron 35.0%
CAAAATTAACCAACGTAGCT+TGG + Chr1:91057349-91057368 MsG0180005381.01.T01:intron 35.0%
CACAACAGTAACTATGTGAT+TGG + Chr1:91053616-91053635 MsG0180005381.01.T01:intron 35.0%
CACACAATCTAAATAAGGCA+TGG - Chr1:91057203-91057222 None:intergenic 35.0%
CACATTGTGAAAACATGCTT+GGG - Chr1:91053723-91053742 None:intergenic 35.0%
CCAATACAAACTATGATGTG+TGG - Chr1:91053574-91053593 None:intergenic 35.0%
CCTAAAAATCCTAGTGTAGT+TGG + Chr1:91052408-91052427 MsG0180005381.01.T01:intron 35.0%
CCTTGACAGAAATTAGTGTT+CGG - Chr1:91053665-91053684 None:intergenic 35.0%
CGTGTTTGTTTCCTATTGAA+AGG - Chr1:91055550-91055569 None:intergenic 35.0%
CTAATATTCATGGCAAAGGA+AGG - Chr1:91057058-91057077 None:intergenic 35.0%
CTTAGTGAAATCAAAGGCTA+AGG + Chr1:91053136-91053155 MsG0180005381.01.T01:intron 35.0%
GAATGATGAGTTAAGATGAG+AGG - Chr1:91054115-91054134 None:intergenic 35.0%
GATGGAATGGATGATGAATT+TGG - Chr1:91056832-91056851 None:intergenic 35.0%
GCAAGAGACAATACAAAATG+CGG + Chr1:91054451-91054470 MsG0180005381.01.T01:CDS 35.0%
GCTAACTTATACAACCGATA+CGG + Chr1:91057778-91057797 MsG0180005381.01.T01:intron 35.0%
GCTACAATGTTCTTTGATGA+TGG + Chr1:91058740-91058759 MsG0180005381.01.T01:CDS 35.0%
GGAAAAGAAAAGGGAATTGA+TGG + Chr1:91052524-91052543 MsG0180005381.01.T01:intron 35.0%
GGAAACAATTGTAAACACCT+TGG + Chr1:91053194-91053213 MsG0180005381.01.T01:intron 35.0%
GGGAAAATGGGTAGAAATTA+GGG + Chr1:91053258-91053277 MsG0180005381.01.T01:intron 35.0%
GTAAATCTCATGGAAACCAA+AGG + Chr1:91052902-91052921 MsG0180005381.01.T01:intron 35.0%
GTAACACTTTCTTCTATTGG+AGG - Chr1:91058359-91058378 None:intergenic 35.0%
GTAATTCAAGCATCTTACAG+GGG - Chr1:91056089-91056108 None:intergenic 35.0%
GTAATTCAAGCTTCTCTTAG+AGG + Chr1:91056590-91056609 MsG0180005381.01.T01:intron 35.0%
GTTACAGATGCTACCAAAAA+TGG + Chr1:91054422-91054441 MsG0180005381.01.T01:intron 35.0%
GTTGAGGATGACTCAAAATT+TGG + Chr1:91052597-91052616 MsG0180005381.01.T01:intron 35.0%
TACTGGCACTATATACATAG+AGG + Chr1:91054354-91054373 MsG0180005381.01.T01:intron 35.0%
TCACCAATGGTTATGTTTGA+AGG - Chr1:91057543-91057562 None:intergenic 35.0%
TCTTGTTCATTGGTGAGATT+GGG + Chr1:91053238-91053257 MsG0180005381.01.T01:intron 35.0%
TGGATGAGAAAGAGAACTTT+GGG + Chr1:91055780-91055799 MsG0180005381.01.T01:intron 35.0%
TGGGAAAATGGGTAGAAATT+AGG + Chr1:91053257-91053276 MsG0180005381.01.T01:intron 35.0%
TGTTGCATAACCCTAAAGAT+TGG - Chr1:91057580-91057599 None:intergenic 35.0%
TTATCTTCAACTGTCACCAA+TGG - Chr1:91057556-91057575 None:intergenic 35.0%
TTTATTCCTTGGTTGGATTG+TGG + Chr1:91053455-91053474 MsG0180005381.01.T01:intron 35.0%
TTTGTTTCCTATTGAAAGGC+CGG - Chr1:91055546-91055565 None:intergenic 35.0%
! AAAAGGGAATTGATGGTTGA+TGG + Chr1:91052531-91052550 MsG0180005381.01.T01:intron 35.0%
! ACTTTTGTCAAAAAGAGGTG+AGG + Chr1:91058489-91058508 MsG0180005381.01.T01:CDS 35.0%
! AGAAGGAAAAGTATGAAGAG+AGG + Chr1:91051976-91051995 MsG0180005381.01.T01:intron 35.0%
! AGAGTCTTTTGTAAGCAACA+TGG + Chr1:91053083-91053102 MsG0180005381.01.T01:intron 35.0%
! ATTTTGTATTGTCTCTTGCG+CGG - Chr1:91054450-91054469 None:intergenic 35.0%
! CCAACTACACTAGGATTTTT+AGG - Chr1:91052411-91052430 None:intergenic 35.0%
! CCAAGCTGAACTTGATAATT+GGG - Chr1:91052041-91052060 None:intergenic 35.0%
! CCACACATCATAGTTTGTAT+TGG + Chr1:91053571-91053590 MsG0180005381.01.T01:intron 35.0%
! CTCCCTCATTCTAAAAAACA+TGG + Chr1:91057947-91057966 MsG0180005381.01.T01:intron 35.0%
! CTCTTTCTAGGAGATACATA+AGG + Chr1:91053900-91053919 MsG0180005381.01.T01:intron 35.0%
! CTTAGCCTTTGATTTCACTA+AGG - Chr1:91053138-91053157 None:intergenic 35.0%
! GAGTCTTTTGTAAGCAACAT+GGG + Chr1:91053084-91053103 MsG0180005381.01.T01:intron 35.0%
! GTGCAACTTTTGTCAAAAAG+AGG + Chr1:91058484-91058503 MsG0180005381.01.T01:CDS 35.0%
! TATGTCGTGAACATGTTTTC+TGG + Chr1:91052685-91052704 MsG0180005381.01.T01:intron 35.0%
! TCACCACAAATTTAGAGTCA+AGG + Chr1:91052565-91052584 MsG0180005381.01.T01:intron 35.0%
! TCACTAAGGATCTTCTCTTT+TGG - Chr1:91053124-91053143 None:intergenic 35.0%
! TCATCATTTTGCTTCCTCTA+TGG - Chr1:91054478-91054497 None:intergenic 35.0%
! TCCAAGCTGAACTTGATAAT+TGG - Chr1:91052042-91052061 None:intergenic 35.0%
! TCTTGTTTGTTTGACGCAAA+TGG - Chr1:91055026-91055045 None:intergenic 35.0%
! TTCAATCGTGACACGATTTT+GGG + Chr1:91052711-91052730 MsG0180005381.01.T01:intron 35.0%
! TTCATGAGTGTCTTGTTCAT+TGG + Chr1:91053228-91053247 MsG0180005381.01.T01:intron 35.0%
!! AGAACTCATTGATAGTGGAT+TGG + Chr1:91053339-91053358 MsG0180005381.01.T01:intron 35.0%
!! AGATTTTAACATAAGAGGGG+AGG + Chr1:91056562-91056581 MsG0180005381.01.T01:intron 35.0%
!! ATTTTAACATAAGAGGGGAG+GGG + Chr1:91056564-91056583 MsG0180005381.01.T01:intron 35.0%
!! CATCATGTTCTGAGAGAAAT+TGG + Chr1:91058579-91058598 MsG0180005381.01.T01:CDS 35.0%
!! CATGCCTTATTTAGATTGTG+TGG + Chr1:91057201-91057220 MsG0180005381.01.T01:intron 35.0%
!! GATGATGAATTTGGTGCATA+TGG - Chr1:91056823-91056842 None:intergenic 35.0%
!! GATTTTAACATAAGAGGGGA+GGG + Chr1:91056563-91056582 MsG0180005381.01.T01:intron 35.0%
!! TGTTTTGAATAAGAGAGGAG+GGG + Chr1:91056637-91056656 MsG0180005381.01.T01:intron 35.0%
!! TTGATGGTTGATGGTTAAAG+TGG + Chr1:91052540-91052559 MsG0180005381.01.T01:intron 35.0%
!!! ATCACTTTTTGATGGAGATG+AGG - Chr1:91056782-91056801 None:intergenic 35.0%
!!! CTCGTTAGAATTTTGACTTC+AGG + Chr1:91054247-91054266 MsG0180005381.01.T01:intron 35.0%
!!! CTTCGTGATTTTTGGAGTAT+CGG - Chr1:91057644-91057663 None:intergenic 35.0%
!!! CTTTTGCTATTCCTCCAAAA+TGG + Chr1:91054950-91054969 MsG0180005381.01.T01:intron 35.0%
!!! GGTGCTTTTGAGTCATTTTT+TGG - Chr1:91055745-91055764 None:intergenic 35.0%
!!! TTCGTGATTTTTGGAGTATC+GGG - Chr1:91057643-91057662 None:intergenic 35.0%
!!! TTGTGGTTTTGTTATGCACT+TGG + Chr1:91053472-91053491 MsG0180005381.01.T01:intron 35.0%
AAAAGGCCAATGGTAATTGG+AGG + Chr1:91052311-91052330 MsG0180005381.01.T01:CDS 40.0%
AATCTCATGGAAACCAAAGG+AGG + Chr1:91052905-91052924 MsG0180005381.01.T01:intron 40.0%
ACAAAACCACAATCCAACCA+AGG - Chr1:91053464-91053483 None:intergenic 40.0%
ACAGTGACAAATCTCCATAG+TGG - Chr1:91058422-91058441 None:intergenic 40.0%
ACTAAACCGTAGTTCTCACA+AGG - Chr1:91054756-91054775 None:intergenic 40.0%
ACTAAAGGTTGAGGGTCTTT+GGG + Chr1:91052948-91052967 MsG0180005381.01.T01:intron 40.0%
ACTATGACGTTGAACAACCA+AGG + Chr1:91055832-91055851 MsG0180005381.01.T01:intron 40.0%
ACTTGGGTGATGTAAGTACT+TGG - Chr1:91055418-91055437 None:intergenic 40.0%
AGAATGTTTGACATGGCTTG+TGG + Chr1:91052279-91052298 MsG0180005381.01.T01:CDS 40.0%
AGCAAACAAAATGCACCACA+AGG - Chr1:91057234-91057253 None:intergenic 40.0%
AGGAAGCAAAATGATGACAG+TGG + Chr1:91054481-91054500 MsG0180005381.01.T01:CDS 40.0%
AGGCCAAAGTAATGACACAA+GGG - Chr1:91054805-91054824 None:intergenic 40.0%
ATACAAAATGCGGTCCATAG+AGG + Chr1:91054461-91054480 MsG0180005381.01.T01:CDS 40.0%
ATATTCATGGCAAAGGAAGG+TGG - Chr1:91057055-91057074 None:intergenic 40.0%
ATCGGTAAGTTTAGCCGTAT+CGG - Chr1:91057795-91057814 None:intergenic 40.0%
ATCTCATGGAAACCAAAGGA+GGG + Chr1:91052906-91052925 MsG0180005381.01.T01:intron 40.0%
ATCTTGGAGAACCAAAAGAG+GGG + Chr1:91052996-91053015 MsG0180005381.01.T01:intron 40.0%
ATCTTTAGATGAACCGGAGT+TGG + Chr1:91058715-91058734 MsG0180005381.01.T01:CDS 40.0%
ATGTGTGGAGCAAGTATCAA+TGG - Chr1:91053559-91053578 None:intergenic 40.0%
ATTGGAGGCAAGTGAATCTT+CGG + Chr1:91052326-91052345 MsG0180005381.01.T01:CDS 40.0%
CAAAATGATGACAGTGGAAG+AGG + Chr1:91054487-91054506 MsG0180005381.01.T01:CDS 40.0%
CAAGAAATGTTCACCCAGTT+CGG - Chr1:91053402-91053421 None:intergenic 40.0%
CAGAATAATGATTCTGCAGG+TGG + Chr1:91058446-91058465 MsG0180005381.01.T01:CDS 40.0%
CATTGGTGAGATTGGGAAAA+TGG + Chr1:91053245-91053264 MsG0180005381.01.T01:intron 40.0%
CCAATGGTTATGTTTGAAGG+TGG - Chr1:91057540-91057559 None:intergenic 40.0%
CCACCTTCAAACATAACCAT+TGG + Chr1:91057537-91057556 MsG0180005381.01.T01:intron 40.0%
CCACCTTGACTCTAAATTTG+TGG - Chr1:91052571-91052590 None:intergenic 40.0%
CCCAATTATCAAGTTCAGCT+TGG + Chr1:91052038-91052057 MsG0180005381.01.T01:intron 40.0%
CCGAACACTAATTTCTGTCA+AGG + Chr1:91053662-91053681 MsG0180005381.01.T01:intron 40.0%
CTAAACCGTAGTTCTCACAA+GGG - Chr1:91054755-91054774 None:intergenic 40.0%
CTCGATAGAGTTTGGATTGA+AGG - Chr1:91054691-91054710 None:intergenic 40.0%
CTTGGGTGATGTAAGTACTT+GGG - Chr1:91055417-91055436 None:intergenic 40.0%
GAATCTTGGAGAACCAAAAG+AGG + Chr1:91052994-91053013 MsG0180005381.01.T01:intron 40.0%
GAGCATGTGAATTCTTCAAG+AGG + Chr1:91052233-91052252 MsG0180005381.01.T01:intron 40.0%
GCATGTCTTCTACGCAAATT+TGG - Chr1:91057612-91057631 None:intergenic 40.0%
GGATGCAAGGGAAAAGAAAA+GGG + Chr1:91052515-91052534 MsG0180005381.01.T01:intron 40.0%
GGATTGAAGGTAAAAGCTCT+TGG - Chr1:91054678-91054697 None:intergenic 40.0%
GGGTTGAAGAATGTTTGACA+TGG + Chr1:91052272-91052291 MsG0180005381.01.T01:CDS 40.0%
GTGCAGAATAATGATTCTGC+AGG + Chr1:91058443-91058462 MsG0180005381.01.T01:CDS 40.0%
GTGCATACTAATGTTGGAGT+TGG + Chr1:91058674-91058693 MsG0180005381.01.T01:CDS 40.0%
GTGGATGAGAAAGAGAACTT+TGG + Chr1:91055779-91055798 MsG0180005381.01.T01:intron 40.0%
GTTGTTCAACGTCATAGTTG+TGG - Chr1:91055830-91055849 None:intergenic 40.0%
TAAACCGTAGTTCTCACAAG+GGG - Chr1:91054754-91054773 None:intergenic 40.0%
TACTAAAGGTTGAGGGTCTT+TGG + Chr1:91052947-91052966 MsG0180005381.01.T01:intron 40.0%
TACTTCTCTGATACGCGTAT+CGG - Chr1:91057702-91057721 None:intergenic 40.0%
TATTCATGGCAAAGGAAGGT+GGG - Chr1:91057054-91057073 None:intergenic 40.0%
TCACTACTTCAGAGGAAACA+CGG - Chr1:91058793-91058812 None:intergenic 40.0%
TCCAACATTCACTACTTCAG+AGG - Chr1:91058801-91058820 None:intergenic 40.0%
TCGAAAAAGGGCTGAAGATT+TGG + Chr1:91058646-91058665 MsG0180005381.01.T01:CDS 40.0%
TGAAATCAAAGGCTAAGGGT+TGG + Chr1:91053141-91053160 MsG0180005381.01.T01:intron 40.0%
TGAATTCTTGTGGAGCTACT+TGG + Chr1:91052485-91052504 MsG0180005381.01.T01:intron 40.0%
TGATGTTGAGATGGAGCAAT+CGG - Chr1:91058035-91058054 None:intergenic 40.0%
TGGATGCAAGGGAAAAGAAA+AGG + Chr1:91052514-91052533 MsG0180005381.01.T01:intron 40.0%
TTACCGATACGTATCGGATA+CGG + Chr1:91057756-91057775 MsG0180005381.01.T01:intron 40.0%
TTATCAAGTTCAGCTTGGAG+AGG + Chr1:91052043-91052062 MsG0180005381.01.T01:intron 40.0%
TTCAAGCTTCTCTTAGAGGA+TGG + Chr1:91056594-91056613 MsG0180005381.01.T01:intron 40.0%
TTTCCTTCTTCGATTGTGCT+AGG - Chr1:91051965-91051984 None:intergenic 40.0%
TTTCTGTCAAGGAACCTTGT+TGG + Chr1:91053673-91053692 MsG0180005381.01.T01:intron 40.0%
! AACCAAAGGAGGGAACTTTT+AGG + Chr1:91052916-91052935 MsG0180005381.01.T01:intron 40.0%
! ACCAAAGGAGGGAACTTTTA+GGG + Chr1:91052917-91052936 MsG0180005381.01.T01:intron 40.0%
! ACTCCATGACCCATTTTGTT+GGG + Chr1:91052871-91052890 MsG0180005381.01.T01:intron 40.0%
! AGAGGAAACACGGATTGTAT+CGG - Chr1:91058783-91058802 None:intergenic 40.0%
! AGGAAAAGTATGAAGAGAGG+AGG + Chr1:91051979-91051998 MsG0180005381.01.T01:intron 40.0%
! ATCCCCTTGTGTCATTACTT+TGG + Chr1:91054799-91054818 MsG0180005381.01.T01:intron 40.0%
! CATGAATTTTCACTCTCCCA+AGG - Chr1:91053214-91053233 None:intergenic 40.0%
! CATGGTTCAATGGAAGTGTA+TGG + Chr1:91051905-91051924 MsG0180005381.01.T01:CDS 40.0%
! CCACAAATTTAGAGTCAAGG+TGG + Chr1:91052568-91052587 MsG0180005381.01.T01:intron 40.0%
! GAACATGAAGATGTTGATGG+AGG - Chr1:91058067-91058086 None:intergenic 40.0%
! GGAAAACGTGACACGATTTT+CGG + Chr1:91052732-91052751 MsG0180005381.01.T01:intron 40.0%
! GTCTTGTTCATTGGTGAGAT+TGG + Chr1:91053237-91053256 MsG0180005381.01.T01:intron 40.0%
! GTTCAATCGTGACACGATTT+TGG + Chr1:91052710-91052729 MsG0180005381.01.T01:intron 40.0%
! TACGCGTATCAGAGAAGTAT+TGG + Chr1:91057703-91057722 MsG0180005381.01.T01:intron 40.0%
! TATCGGTATCGGATACGTAT+CGG - Chr1:91057675-91057694 None:intergenic 40.0%
! TTTTAACATAAGAGGGGAGG+GGG + Chr1:91056565-91056584 MsG0180005381.01.T01:intron 40.0%
!! ACGCGTATCAGAGAAGTATT+GGG + Chr1:91057704-91057723 MsG0180005381.01.T01:intron 40.0%
!! ATGCTTTGATGATGCTACCA+GGG - Chr1:91057508-91057527 None:intergenic 40.0%
!! CATCGATTCCTCTGAAAATG+TGG - Chr1:91057020-91057039 None:intergenic 40.0%
!! GAAGTGTATGGAAGCATTGA+AGG + Chr1:91051917-91051936 MsG0180005381.01.T01:CDS 40.0%
!! GATGTAATGGATGTGATGTG+AGG + Chr1:91053808-91053827 MsG0180005381.01.T01:intron 40.0%
!! GCAAGTTTTCAGGATAAGGT+TGG + Chr1:91052763-91052782 MsG0180005381.01.T01:intron 40.0%
!! GTGATTTGGTTGTTTGAGAG+CGG - Chr1:91055626-91055645 None:intergenic 40.0%
!! TATGGAAGCATTGAAGGTTG+AGG + Chr1:91051923-91051942 MsG0180005381.01.T01:CDS 40.0%
!! TCCTCTGAAGTAGTGAATGT+TGG + Chr1:91058797-91058816 MsG0180005381.01.T01:CDS 40.0%
!! TTCTTTGATGATGGAAACGG+AGG + Chr1:91058749-91058768 MsG0180005381.01.T01:CDS 40.0%
!! TTGTGGTGCATTTTGTTTGC+TGG + Chr1:91057233-91057252 MsG0180005381.01.T01:intron 40.0%
!!! CAATTACCATTGGCCTTTTC+CGG - Chr1:91052310-91052329 None:intergenic 40.0%
!!! CTAAGGGTTGGTTCTCTTTT+GGG + Chr1:91053153-91053172 MsG0180005381.01.T01:intron 40.0%
!!! TAAGGGTTGGTTCTCTTTTG+GGG + Chr1:91053154-91053173 MsG0180005381.01.T01:intron 40.0%
!!! TCGTGATTTTTGGAGTATCG+GGG - Chr1:91057642-91057661 None:intergenic 40.0%
!!! TTGGTGTTTTGGAGTTTTGG+AGG + Chr1:91052616-91052635 MsG0180005381.01.T01:intron 40.0%
AACATTGTAGCCTCCAACTC+CGG - Chr1:91058731-91058750 None:intergenic 45.0%
AATGAAGCCGGCCTTTCAAT+AGG + Chr1:91055536-91055555 MsG0180005381.01.T01:intron 45.0%
AATTGCTGGTGAAGGAGTTC+AGG + Chr1:91058547-91058566 MsG0180005381.01.T01:CDS 45.0%
ACCAAGCTTCCCCAACAAAA+TGG - Chr1:91052884-91052903 None:intergenic 45.0%
ACCCTAAAAGTTCCCTCCTT+TGG - Chr1:91052921-91052940 None:intergenic 45.0%
ACCCTTACCTCTTCAAACCT+CGG - Chr1:91052466-91052485 None:intergenic 45.0%
ACTTCTCTGATACGCGTATC+GGG - Chr1:91057701-91057720 None:intergenic 45.0%
AGAGAAAGCTCAACTTGAGG+TGG + Chr1:91052151-91052170 MsG0180005381.01.T01:CDS 45.0%
AGAGGGAAAGGGAATGTAAG+AGG - Chr1:91056014-91056033 None:intergenic 45.0%
AGCCTACACCATAACCTCTT+CGG - Chr1:91052378-91052397 None:intergenic 45.0%
ATACTCGCGATCAACCTTTG+AGG + Chr1:91052077-91052096 MsG0180005381.01.T01:intron 45.0%
ATCAGGTAGTGTTAGGCACT+TGG - Chr1:91054063-91054082 None:intergenic 45.0%
ATCCAAACTCTATCGAGCCA+AGG + Chr1:91054694-91054713 MsG0180005381.01.T01:CDS 45.0%
ATGAAGAGAGGAGGTCATGA+TGG + Chr1:91051988-91052007 MsG0180005381.01.T01:intron 45.0%
ATTCAAGCATCTTACAGGGG+AGG - Chr1:91056086-91056105 None:intergenic 45.0%
CAAACGCTCTTTGAGCCTTT+AGG + Chr1:91057472-91057491 MsG0180005381.01.T01:intron 45.0%
CAAAGGTTGCATCTTGGAGA+TGG + Chr1:91051875-91051894 MsG0180005381.01.T01:CDS 45.0%
CAACTAGAGCATAACACCCA+AGG - Chr1:91052212-91052231 None:intergenic 45.0%
CACTTGCCTCCAATTACCAT+TGG - Chr1:91052320-91052339 None:intergenic 45.0%
CAGGCCAAAGTAATGACACA+AGG - Chr1:91054806-91054825 None:intergenic 45.0%
CATCCTAGCACAATCGAAGA+AGG + Chr1:91051959-91051978 MsG0180005381.01.T01:CDS 45.0%
CATCTCCAAGATGCAACCTT+TGG - Chr1:91051877-91051896 None:intergenic 45.0%
CCAAGCTTCCCCAACAAAAT+GGG - Chr1:91052883-91052902 None:intergenic 45.0%
CGAACTGGGTGAACATTTCT+TGG + Chr1:91053400-91053419 MsG0180005381.01.T01:intron 45.0%
CGGAAAAGGCCAATGGTAAT+TGG + Chr1:91052308-91052327 MsG0180005381.01.T01:CDS 45.0%
CGTGACAGAGAAAACATCCT+GGG + Chr1:91054526-91054545 MsG0180005381.01.T01:CDS 45.0%
CGTTTGTCCAAATCGTGACA+CGG - Chr1:91052814-91052833 None:intergenic 45.0%
GAAGATATTGCCCACCAATG+AGG - Chr1:91057444-91057463 None:intergenic 45.0%
GAATTACCGGAAAAGGCCAA+TGG + Chr1:91052301-91052320 MsG0180005381.01.T01:CDS 45.0%
GAATTCTTCAAGAGGACGGA+AGG + Chr1:91052241-91052260 MsG0180005381.01.T01:intron 45.0%
GAGGGAAAGGGAATGTAAGA+GGG - Chr1:91056013-91056032 None:intergenic 45.0%
GAGGTAAGGGTGAATTCTTG+TGG + Chr1:91052475-91052494 MsG0180005381.01.T01:intron 45.0%
GCATAGTGTGTGTACGCATT+CGG + Chr1:91052118-91052137 MsG0180005381.01.T01:CDS 45.0%
GCTTGTGGAATTACCGGAAA+AGG + Chr1:91052294-91052313 MsG0180005381.01.T01:CDS 45.0%
GGATGCAAGGAACTTCAAGA+GGG + Chr1:91052429-91052448 MsG0180005381.01.T01:intron 45.0%
GGCCAAAGTAATGACACAAG+GGG - Chr1:91054804-91054823 None:intergenic 45.0%
GGGAAGCTTGGTAAATCTCA+TGG + Chr1:91052892-91052911 MsG0180005381.01.T01:intron 45.0%
GGGGGTTAGATTCTAGTGTT+GGG + Chr1:91053173-91053192 MsG0180005381.01.T01:intron 45.0%
GGTAGAGAAAGCTCAACTTG+AGG + Chr1:91052148-91052167 MsG0180005381.01.T01:CDS 45.0%
GTATCAACCGTGTCACGATT+TGG + Chr1:91052804-91052823 MsG0180005381.01.T01:intron 45.0%
GTCAAACATTCTTCAACCCC+CGG - Chr1:91052271-91052290 None:intergenic 45.0%
GTCAAGGTGGAGAATTGTTG+AGG + Chr1:91052581-91052600 MsG0180005381.01.T01:intron 45.0%
TAGAAGGACTGGAGGAGATA+AGG - Chr1:91058007-91058026 None:intergenic 45.0%
TAGCCGTATCCGATACGTAT+CGG - Chr1:91057762-91057781 None:intergenic 45.0%
TCCGAGGTTTGAAGAGGTAA+GGG + Chr1:91052462-91052481 MsG0180005381.01.T01:intron 45.0%
TCCTAGTGTAGTTGGATGCA+AGG + Chr1:91052416-91052435 MsG0180005381.01.T01:intron 45.0%
TCCTTGCATCCAACTACACT+AGG - Chr1:91052420-91052439 None:intergenic 45.0%
TCTTGGAGAACCAAAAGAGG+GGG + Chr1:91052997-91053016 MsG0180005381.01.T01:intron 45.0%
TGGAAGCAAGCATGGTTCAA+TGG + Chr1:91051895-91051914 MsG0180005381.01.T01:CDS 45.0%
TGGATGCAAGGAACTTCAAG+AGG + Chr1:91052428-91052447 MsG0180005381.01.T01:intron 45.0%
TGGGGGTTAGATTCTAGTGT+TGG + Chr1:91053172-91053191 MsG0180005381.01.T01:intron 45.0%
TTCAAGCATCTTACAGGGGA+GGG - Chr1:91056085-91056104 None:intergenic 45.0%
TTCCCCAACAAAATGGGTCA+TGG - Chr1:91052877-91052896 None:intergenic 45.0%
TTCCGAGGTTTGAAGAGGTA+AGG + Chr1:91052461-91052480 MsG0180005381.01.T01:intron 45.0%
TTCGATTGTGCTAGGATGAC+CGG - Chr1:91051957-91051976 None:intergenic 45.0%
TTGAGCCTTTAGGCTTTCTG+TGG + Chr1:91057482-91057501 MsG0180005381.01.T01:intron 45.0%
TTGGAGGCAAGTGAATCTTC+GGG + Chr1:91052327-91052346 MsG0180005381.01.T01:CDS 45.0%
TTTAGATGAACCGGAGTTGG+AGG + Chr1:91058718-91058737 MsG0180005381.01.T01:CDS 45.0%
TTTGGCCCCCAAGTTTCAAT+TGG + Chr1:91055883-91055902 MsG0180005381.01.T01:intron 45.0%
! ACCTTGTTGGTTACCCTTAG+TGG + Chr1:91053686-91053705 MsG0180005381.01.T01:intron 45.0%
! AGGAAAGGCCACATTTTCAG+AGG + Chr1:91057009-91057028 MsG0180005381.01.T01:intron 45.0%
! CACTCCATGACCCATTTTGT+TGG + Chr1:91052870-91052889 MsG0180005381.01.T01:intron 45.0%
! CCTTGTTGGTTACCCTTAGT+GGG + Chr1:91053687-91053706 MsG0180005381.01.T01:intron 45.0%
! CTCCATGACCCATTTTGTTG+GGG + Chr1:91052872-91052891 MsG0180005381.01.T01:intron 45.0%
! CTTGGTGTAGTTGGATGCAA+GGG + Chr1:91052503-91052522 MsG0180005381.01.T01:intron 45.0%
! CTTGTTGGTTACCCTTAGTG+GGG + Chr1:91053688-91053707 MsG0180005381.01.T01:intron 45.0%
! GACATGGCTTGTGGAATTAC+CGG + Chr1:91052288-91052307 MsG0180005381.01.T01:CDS 45.0%
! GAGAGCCTCTAGAAATTCCT+TGG - Chr1:91054714-91054733 None:intergenic 45.0%
! GATAAGGTTGGTCGTACCTT+GGG + Chr1:91052775-91052794 MsG0180005381.01.T01:intron 45.0%
! TCGAGCCAAGGAATTTCTAG+AGG + Chr1:91054706-91054725 MsG0180005381.01.T01:CDS 45.0%
! TTCCTTGGCTCGATAGAGTT+TGG - Chr1:91054699-91054718 None:intergenic 45.0%
!! ACTTGGTGTAGTTGGATGCA+AGG + Chr1:91052502-91052521 MsG0180005381.01.T01:intron 45.0%
!! CCTTTTGGGGAAGATTCATG+GGG + Chr1:91053041-91053060 MsG0180005381.01.T01:intron 45.0%
!! CTGGGCAAGTTTTCAGGATA+AGG + Chr1:91052759-91052778 MsG0180005381.01.T01:intron 45.0%
!! GATGCTTTGATGATGCTACC+AGG - Chr1:91057509-91057528 None:intergenic 45.0%
!! GCCTTTTGGGGAAGATTCAT+GGG + Chr1:91053040-91053059 MsG0180005381.01.T01:intron 45.0%
!! GGCACTTGGCCTTAAAATTC+TGG - Chr1:91054049-91054068 None:intergenic 45.0%
!! TAGCTTGGTCCAGTTGGTAA+GGG + Chr1:91057364-91057383 MsG0180005381.01.T01:intron 45.0%
!! TGCCTTTTGGGGAAGATTCA+TGG + Chr1:91053039-91053058 MsG0180005381.01.T01:intron 45.0%
!!! AAAAGGGTTGGTGCCTTTTG+GGG + Chr1:91053028-91053047 MsG0180005381.01.T01:intron 45.0%
!!! AAGGGTTGGTTCTCTTTTGG+GGG + Chr1:91053155-91053174 MsG0180005381.01.T01:intron 45.0%
!!! GAAAAGGGTTGGTGCCTTTT+GGG + Chr1:91053027-91053046 MsG0180005381.01.T01:intron 45.0%
!!! GCTAAGGGTTGGTTCTCTTT+TGG + Chr1:91053152-91053171 MsG0180005381.01.T01:intron 45.0%
!!! TTTTTGGAGTATCGGGGCTT+TGG - Chr1:91057636-91057655 None:intergenic 45.0%
!!! ACATATTTTAATTTTATTTT+TGG + Chr1:91056342-91056361 MsG0180005381.01.T01:intron 5.0%
AACCAAAAGAGGGGGCTCTT+GGG + Chr1:91053005-91053024 MsG0180005381.01.T01:intron 50.0%
AAGTGAATCTTCGGGAGGAC+GGG + Chr1:91052335-91052354 MsG0180005381.01.T01:CDS 50.0%
AATCGGCAGGTTAGAAGGAC+TGG - Chr1:91058018-91058037 None:intergenic 50.0%
AGCGTTAGGACCTCATTGGT+GGG + Chr1:91057431-91057450 MsG0180005381.01.T01:intron 50.0%
AGGCATTCCGAGGTTTGAAG+AGG + Chr1:91052456-91052475 MsG0180005381.01.T01:intron 50.0%
AGTTGAACTCACGCCCTTGT+AGG - Chr1:91057402-91057421 None:intergenic 50.0%
ATACGCGTATCGGGACGTAT+CGG - Chr1:91057692-91057711 None:intergenic 50.0%
ATCAATCTCTCCCCCAGAGT+AGG + Chr1:91053366-91053385 MsG0180005381.01.T01:intron 50.0%
CAAGTGAATCTTCGGGAGGA+CGG + Chr1:91052334-91052353 MsG0180005381.01.T01:CDS 50.0%
CCCACTAAGGGTAACCAACA+AGG - Chr1:91053690-91053709 None:intergenic 50.0%
CCCCATGAATCTTCCCCAAA+AGG - Chr1:91053044-91053063 None:intergenic 50.0%
CTCCATAGTCGTACCATTCC+CGG - Chr1:91052188-91052207 None:intergenic 50.0%
CTGCAGGTGGAAACAAGCTT+TGG + Chr1:91058459-91058478 MsG0180005381.01.T01:CDS 50.0%
CTTGGAGATGGAAGCAAGCA+TGG + Chr1:91051887-91051906 MsG0180005381.01.T01:CDS 50.0%
GAAGGTTGAGGTTTCGAAGC+CGG + Chr1:91051935-91051954 MsG0180005381.01.T01:CDS 50.0%
GAGATAAGGAGAATCGCTGG+CGG - Chr1:91057993-91058012 None:intergenic 50.0%
GAGGAGATAAGGAGAATCGC+TGG - Chr1:91057996-91058015 None:intergenic 50.0%
GAGGTTATGGTGTAGGCTTG+TGG + Chr1:91052380-91052399 MsG0180005381.01.T01:intron 50.0%
GCGTGACAGAGAAAACATCC+TGG + Chr1:91054525-91054544 MsG0180005381.01.T01:CDS 50.0%
GGGTACCAAAGGTTGCATCT+TGG + Chr1:91051869-91051888 MsG0180005381.01.T01:CDS 50.0%
GGTCCAACTTGACCTACTCT+GGG - Chr1:91053381-91053400 None:intergenic 50.0%
GTCACCCCTTGTGAGAACTA+CGG + Chr1:91054747-91054766 MsG0180005381.01.T01:intron 50.0%
GTCCAACTTGACCTACTCTG+GGG - Chr1:91053380-91053399 None:intergenic 50.0%
GTGAAAACATGCTTGGGGAG+AGG - Chr1:91053717-91053736 None:intergenic 50.0%
GTGACATGATTTCGTGAGCG+TGG + Chr1:91052651-91052670 MsG0180005381.01.T01:intron 50.0%
GTGTACGCATTCGGAAGTTG+AGG + Chr1:91052127-91052146 MsG0180005381.01.T01:CDS 50.0%
GTTGAACTCACGCCCTTGTA+GGG - Chr1:91057401-91057420 None:intergenic 50.0%
TCAAGCATCTTACAGGGGAG+GGG - Chr1:91056084-91056103 None:intergenic 50.0%
TCAAGTTCAGCTTGGAGAGG+CGG + Chr1:91052046-91052065 MsG0180005381.01.T01:intron 50.0%
TCATCCACACTCACCGAAGA+GGG - Chr1:91055767-91055786 None:intergenic 50.0%
TCCAACTTGACCTACTCTGG+GGG - Chr1:91053379-91053398 None:intergenic 50.0%
TGCAAGGAACTTCAAGAGGG+CGG + Chr1:91052432-91052451 MsG0180005381.01.T01:intron 50.0%
TGGGGAAGATTCATGGGGTT+GGG + Chr1:91053046-91053065 MsG0180005381.01.T01:intron 50.0%
TTGGGGAAGATTCATGGGGT+TGG + Chr1:91053045-91053064 MsG0180005381.01.T01:intron 50.0%
TTGTGTGGACTTGAGCCTTG+TGG + Chr1:91057216-91057235 MsG0180005381.01.T01:intron 50.0%
! AGGTCATGATGGTGATGTCG+TGG + Chr1:91051999-91052018 MsG0180005381.01.T01:intron 50.0%
! CCCATTTTGTTGGGGAAGCT+TGG + Chr1:91052880-91052899 MsG0180005381.01.T01:intron 50.0%
! GAAGAGGCTCGACTGATTCT+TGG + Chr1:91054503-91054522 MsG0180005381.01.T01:CDS 50.0%
! GGATAAGGTTGGTCGTACCT+TGG + Chr1:91052774-91052793 MsG0180005381.01.T01:intron 50.0%
! GGTTGGCTCATACCCTACAA+GGG + Chr1:91057386-91057405 MsG0180005381.01.T01:intron 50.0%
! GTAGCTTGGTCCAGTTGGTA+AGG + Chr1:91057363-91057382 MsG0180005381.01.T01:intron 50.0%
! GTATCGGGACGTATCGGTAT+CGG - Chr1:91057686-91057705 None:intergenic 50.0%
! GTTGTTTGAGAGCGGTGTTG+TGG - Chr1:91055618-91055637 None:intergenic 50.0%
! TCATGATGGTGATGTCGTGG+CGG + Chr1:91052002-91052021 MsG0180005381.01.T01:intron 50.0%
!! AGCTTGGTCCAGTTGGTAAG+GGG + Chr1:91057365-91057384 MsG0180005381.01.T01:intron 50.0%
!! AGGTCAAGTTGGACCGAACT+GGG + Chr1:91053386-91053405 MsG0180005381.01.T01:intron 50.0%
!! GACACGATTTTCGGCTTGCT+GGG + Chr1:91052741-91052760 MsG0180005381.01.T01:intron 50.0%
!! GACTCAAAAGCACCCCTCTT+CGG + Chr1:91055751-91055770 MsG0180005381.01.T01:intron 50.0%
!! GATCAACCTTTGAGGTGGAG+TGG + Chr1:91052085-91052104 MsG0180005381.01.T01:intron 50.0%
!! GTGGAGCTACTTGGTGTAGT+TGG + Chr1:91052494-91052513 MsG0180005381.01.T01:intron 50.0%
!! TAGGTCAAGTTGGACCGAAC+TGG + Chr1:91053385-91053404 MsG0180005381.01.T01:intron 50.0%
!! TGACACGATTTTCGGCTTGC+TGG + Chr1:91052740-91052759 MsG0180005381.01.T01:intron 50.0%
!! TGAGGTGGAGTTGATGACAC+CGG + Chr1:91052166-91052185 MsG0180005381.01.T01:CDS 50.0%
!! TGATGATGGAAACGGAGGAG+AGG + Chr1:91058754-91058773 MsG0180005381.01.T01:CDS 50.0%
!!! GGAAAAGGGTTGGTGCCTTT+TGG + Chr1:91053026-91053045 MsG0180005381.01.T01:intron 50.0%
AAGAGGGGGCTCTTGGGAAA+AGG + Chr1:91053011-91053030 MsG0180005381.01.T01:intron 55.0%
ACCTTGCCACTCCACCTCAA+AGG - Chr1:91052094-91052113 None:intergenic 55.0%
AGAGGCTCTCCAACGAGACA+AGG + Chr1:91054724-91054743 MsG0180005381.01.T01:CDS 55.0%
AGAGGGGGCTCTTGGGAAAA+GGG + Chr1:91053012-91053031 MsG0180005381.01.T01:intron 55.0%
AGGAACTTCAAGAGGGCGGA+AGG + Chr1:91052436-91052455 MsG0180005381.01.T01:intron 55.0%
AGGTTGAGGGTCTTTGGGTG+AGG + Chr1:91052953-91052972 MsG0180005381.01.T01:intron 55.0%
CACCAATGAGGTCCTAACGC+TGG - Chr1:91057432-91057451 None:intergenic 55.0%
CACCGGGAATGGTACGACTA+TGG + Chr1:91052183-91052202 MsG0180005381.01.T01:intron 55.0%
CAGCGTTAGGACCTCATTGG+TGG + Chr1:91057430-91057449 MsG0180005381.01.T01:intron 55.0%
CAGGGCCACAGAAAGCCTAA+AGG - Chr1:91057490-91057509 None:intergenic 55.0%
CATCCACACTCACCGAAGAG+GGG - Chr1:91055766-91055785 None:intergenic 55.0%
CCAACGTAGCTTGGTCCAGT+TGG + Chr1:91057358-91057377 MsG0180005381.01.T01:intron 55.0%
CCAACTGGACCAAGCTACGT+TGG - Chr1:91057361-91057380 None:intergenic 55.0%
CGGGAATGGTACGACTATGG+AGG + Chr1:91052186-91052205 MsG0180005381.01.T01:intron 55.0%
CGGTCCAACTTGACCTACTC+TGG - Chr1:91053382-91053401 None:intergenic 55.0%
CTCATCCACACTCACCGAAG+AGG - Chr1:91055768-91055787 None:intergenic 55.0%
CTTTAGGCTTTCTGTGGCCC+TGG + Chr1:91057488-91057507 MsG0180005381.01.T01:intron 55.0%
GAACCAAAAGAGGGGGCTCT+TGG + Chr1:91053004-91053023 MsG0180005381.01.T01:intron 55.0%
GAGGCAAGTGAATCTTCGGG+AGG + Chr1:91052330-91052349 MsG0180005381.01.T01:CDS 55.0%
GAGGCTCTCCAACGAGACAA+GGG + Chr1:91054725-91054744 MsG0180005381.01.T01:CDS 55.0%
GGAGCAATCGGCAGGTTAGA+AGG - Chr1:91058023-91058042 None:intergenic 55.0%
GGCCGAAGAGGTTATGGTGT+AGG + Chr1:91052373-91052392 MsG0180005381.01.T01:intron 55.0%
GGGAGAGGAAACCCCACTAA+GGG - Chr1:91053702-91053721 None:intergenic 55.0%
GGGCGTGAGTTCAACTTCCA+CGG + Chr1:91057406-91057425 MsG0180005381.01.T01:intron 55.0%
GGTACGACTATGGAGGCCTT+GGG + Chr1:91052193-91052212 MsG0180005381.01.T01:intron 55.0%
GTGGCGTTCATCGTCTTGTG+CGG - Chr1:91055599-91055618 None:intergenic 55.0%
GTTGAGATGGAGCAATCGGC+AGG - Chr1:91058031-91058050 None:intergenic 55.0%
TCATGGCAAAGGAAGGTGGG+TGG - Chr1:91057051-91057070 None:intergenic 55.0%
TCCCCCAGAGTAGGTCAAGT+TGG + Chr1:91053375-91053394 MsG0180005381.01.T01:intron 55.0%
TGAGCCAACCCCTTACCAAC+TGG - Chr1:91057376-91057395 None:intergenic 55.0%
TGGTACGACTATGGAGGCCT+TGG + Chr1:91052192-91052211 MsG0180005381.01.T01:intron 55.0%
! AGGACGGGTTTGATCACTCC+GGG + Chr1:91052350-91052369 MsG0180005381.01.T01:CDS 55.0%
! CGGTTGATACGTACGACCCA+AGG - Chr1:91052794-91052813 None:intergenic 55.0%
! CTCGCGATCAACCTTTGAGG+TGG + Chr1:91052080-91052099 MsG0180005381.01.T01:intron 55.0%
! CTCTTGCGCGGCACCATTTT+TGG - Chr1:91054438-91054457 None:intergenic 55.0%
! GAGGACGGGTTTGATCACTC+CGG + Chr1:91052349-91052368 MsG0180005381.01.T01:CDS 55.0%
! TCGTGAGCGTGGCACGATTT+TGG + Chr1:91052662-91052681 MsG0180005381.01.T01:intron 55.0%
! TTCCCAAGAGCCCCCTCTTT+TGG - Chr1:91053010-91053029 None:intergenic 55.0%
! TTTGAGGTGGAGTGGCAAGG+TGG + Chr1:91052093-91052112 MsG0180005381.01.T01:intron 55.0%
!! AAGAGGACGGAAGGCATTCC+GGG + Chr1:91052250-91052269 MsG0180005381.01.T01:intron 55.0%
!! ACCTTTGAGGTGGAGTGGCA+AGG + Chr1:91052090-91052109 MsG0180005381.01.T01:intron 55.0%
!! CAAGAGGACGGAAGGCATTC+CGG + Chr1:91052249-91052268 MsG0180005381.01.T01:intron 55.0%
!! GAGGTGGAGTTGATGACACC+GGG + Chr1:91052167-91052186 MsG0180005381.01.T01:CDS 55.0%
!! GGAGTTGATGACACCGGGAA+TGG + Chr1:91052172-91052191 MsG0180005381.01.T01:CDS 55.0%
!! GGGTTGGCTCATACCCTACA+AGG + Chr1:91057385-91057404 MsG0180005381.01.T01:intron 55.0%
!! TGGTCCAGTTGGTAAGGGGT+TGG + Chr1:91057369-91057388 MsG0180005381.01.T01:intron 55.0%
!!! GGCTTGCTGGGCAAGTTTTC+AGG + Chr1:91052753-91052772 MsG0180005381.01.T01:intron 55.0%
AAGGAGAATCGCTGGCGGTG+AGG - Chr1:91057988-91058007 None:intergenic 60.0%
ACCATAACCTCTTCGGCCCC+CGG - Chr1:91052371-91052390 None:intergenic 60.0%
AGGGGTGACCCTTGTCTCGT+TGG - Chr1:91054736-91054755 None:intergenic 60.0%
CAACTTCCACGGCCAGCGTT+AGG + Chr1:91057417-91057436 MsG0180005381.01.T01:intron 60.0%
CGGCAGGTTAGAAGGACTGG+AGG - Chr1:91058015-91058034 None:intergenic 60.0%
GGCCAGCGTTAGGACCTCAT+TGG + Chr1:91057427-91057446 MsG0180005381.01.T01:intron 60.0%
GGGGAGAGGAAACCCCACTA+AGG - Chr1:91053703-91053722 None:intergenic 60.0%
GGGGCTCTTGGGAAAAGGGT+TGG + Chr1:91053016-91053035 MsG0180005381.01.T01:intron 60.0%
! GACGGGTTTGATCACTCCGG+GGG + Chr1:91052352-91052371 MsG0180005381.01.T01:CDS 60.0%
! GGACGGGTTTGATCACTCCG+GGG + Chr1:91052351-91052370 MsG0180005381.01.T01:CDS 60.0%
!! AGAGGACGGAAGGCATTCCG+GGG + Chr1:91052251-91052270 MsG0180005381.01.T01:intron 60.0%
GCACCCCTCTTCGGTGAGTG+TGG + Chr1:91055760-91055779 MsG0180005381.01.T01:intron 65.0%
TCCGGGGGCCGAAGAGGTTA+TGG + Chr1:91052367-91052386 MsG0180005381.01.T01:intron 65.0%
TGAGGTCCTAACGCTGGCCG+TGG - Chr1:91057426-91057445 None:intergenic 65.0%
!! AGAGGGCGGAAGGCATTCCG+AGG + Chr1:91052446-91052465 MsG0180005381.01.T01:intron 65.0%
!! GAGGACGGAAGGCATTCCGG+GGG + Chr1:91052252-91052271 MsG0180005381.01.T01:intron 65.0%
GATCACTCCGGGGGCCGAAG+AGG + Chr1:91052361-91052380 MsG0180005381.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 91051867 91058992 91051867 ID=MsG0180005381.01;Name=MsG0180005381.01
Chr1 mRNA 91051867 91058992 91051867 ID=MsG0180005381.01.T01;Parent=MsG0180005381.01;Name=MsG0180005381.01.T01;_AED=0.40;_eAED=0.56;_QI=0|0|0.16|1|1|1|6|166|346
Chr1 exon 91051867 91051985 91051867 ID=MsG0180005381.01.T01:exon:17568;Parent=MsG0180005381.01.T01
Chr1 exon 91052112 91052193 91052112 ID=MsG0180005381.01.T01:exon:17569;Parent=MsG0180005381.01.T01
Chr1 exon 91052253 91052382 91052253 ID=MsG0180005381.01.T01:exon:17570;Parent=MsG0180005381.01.T01
Chr1 exon 91054429 91054562 91054429 ID=MsG0180005381.01.T01:exon:17571;Parent=MsG0180005381.01.T01
Chr1 exon 91054647 91054746 91054647 ID=MsG0180005381.01.T01:exon:17572;Parent=MsG0180005381.01.T01
Chr1 exon 91058351 91058992 91058351 ID=MsG0180005381.01.T01:exon:17573;Parent=MsG0180005381.01.T01
Chr1 CDS 91051867 91051985 91051867 ID=MsG0180005381.01.T01:cds;Parent=MsG0180005381.01.T01
Chr1 CDS 91052112 91052193 91052112 ID=MsG0180005381.01.T01:cds;Parent=MsG0180005381.01.T01
Chr1 CDS 91052253 91052382 91052253 ID=MsG0180005381.01.T01:cds;Parent=MsG0180005381.01.T01
Chr1 CDS 91054429 91054562 91054429 ID=MsG0180005381.01.T01:cds;Parent=MsG0180005381.01.T01
Chr1 CDS 91054647 91054746 91054647 ID=MsG0180005381.01.T01:cds;Parent=MsG0180005381.01.T01
Chr1 CDS 91058351 91058826 91058351 ID=MsG0180005381.01.T01:cds;Parent=MsG0180005381.01.T01
Chr1 three_prime_UTR 91058827 91058992 91058827 ID=MsG0180005381.01.T01:three_prime_utr;Parent=MsG0180005381.01.T01
Gene Sequence

>MsG0180005381.01.T01

ATGGGTACCAAAGGTTGCATCTTGGAGATGGAAGCAAGCATGGTTCAATGGAAGTGTATGGAAGCATTGAAGGTTGAGGTTTCGAAGCCGGTCATCCTAGCACAATCGAAGAAGGAAAAGTGGAAGCATAGTGTGTGTACGCATTCGGAAGTTGAGGTAGAGAAAGCTCAACTTGAGGTGGAGTTGATGACACCGGGAATGAGGACGGAAGGCATTCCGGGGGTTGAAGAATGTTTGACATGGCTTGTGGAATTACCGGAAAAGGCCAATGGTAATTGGAGGCAAGTGAATCTTCGGGAGGACGGGTTTGATCACTCCGGGGGCCGAAGAGATGCTACCAAAAATGGTGCCGCGCAAGAGACAATACAAAATGCGGTCCATAGAGGAAGCAAAATGATGACAGTGGAAGAGGCTCGACTGATTCTTGGCGTGACAGAGAAAACATCCTGGGAAGATATTGTAAAGAAATTTGAAACTATGTTTGAGAAAAATGCCAAGAGCTTTTACCTTCAATCCAAACTCTATCGAGCCAAGGAATTTCTAGAGGCTCTCCAACGAGACAAGGTTATGCCTCCAATAGAAGAAAGTGTTACTAGTTGGTTTGCTTCAAAAGAACCCCAAGATGATAGTAAACCACTATGGAGATTTGTCACTGTTGTGCAGAATAATGATTCTGCAGGTGGAAACAAGCTTTGGAAGTGCAACTTTTGTCAAAAAGAGGTGAGGAGTTCATACTCTATAGCGAGATTTCACTTATTGAAAATTGCTGGTGAAGGAGTTCAGGTATGTTCTTCATCATGTTCTGAGAGAAATTGGAGTACTTACTCTTTTATTCAATCTTTGAAAAGAAATAAAATGGATCGAAAAAGGGCTGAAGATTTGGTTTATGTGCATACTAATGTTGGAGTTGGAATTGAATTAGCTGAGTTATCTTTAGATGAACCGGAGTTGGAGGCTACAATGTTCTTTGATGATGGAAACGGAGGAGAGGAGACCGATACAATCCGTGTTTCCTCTGAAGTAGTGAATGTTGGACTATGA
Protein sequence

>MsG0180005381.01.T01

MGTKGCILEMEASMVQWKCMEALKVEVSKPVILAQSKKEKWKHSVCTHSEVEVEKAQLEVELMTPGMRTEGIPGVEECLTWLVELPEKANGNWRQVNLREDGFDHSGGRRDATKNGAAQETIQNAVHRGSKMMTVEEARLILGVTEKTSWEDIVKKFETMFEKNAKSFYLQSKLYRAKEFLEALQRDKVMPPIEESVTSWFASKEPQDDSKPLWRFVTVVQNNDSAGGNKLWKCNFCQKEVRSSYSIARFHLLKIAGEGVQVCSSSCSERNWSTYSFIQSLKRNKMDRKRAEDLVYVHTNVGVGIELAELSLDEPELEATMFFDDGNGGEETDTIRVSSEVVNVGL*