AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006808.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006808.01.T01 MTR_2g015510 68.584 226 32 2 1 226 1 187 3.52e-104 301
MsG0280006808.01.T01 MTR_2g015500 71.770 209 18 3 3 209 2 171 4.84e-101 293
MsG0280006808.01.T01 MTR_2g015480 56.019 216 43 4 13 226 65 230 5.17e-70 217
MsG0280006808.01.T01 MTR_7g068550 35.122 205 86 5 5 209 6 163 5.75e-30 112
MsG0280006808.01.T01 MTR_7g068530 34.466 206 88 5 4 209 5 163 6.26e-29 109
MsG0280006808.01.T01 MTR_4g016510 32.057 209 94 6 4 212 5 165 1.16e-27 106
MsG0280006808.01.T01 MTR_7g068460 33.173 208 92 6 2 209 30 190 3.40e-27 105
MsG0280006808.01.T01 MTR_7g068500 34.300 207 89 7 3 209 30 189 4.38e-25 100
MsG0280006808.01.T01 MTR_3g070460 31.683 202 93 4 5 206 6 162 3.35e-24 97.1
MsG0280006808.01.T01 MTR_7g068470 32.039 206 91 7 5 209 2 159 9.04e-24 95.9
MsG0280006808.01.T01 MTR_4g105680 37.059 170 67 4 37 206 62 191 1.01e-23 96.3
MsG0280006808.01.T01 MTR_7g068470 31.553 206 88 7 5 209 2 155 1.74e-22 92.4
MsG0280006808.01.T01 MTR_7g068450 28.293 205 104 3 5 209 2 163 2.41e-21 89.4
MsG0280006808.01.T01 MTR_7g068520 50.847 59 28 1 5 63 3 60 7.76e-14 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006808.01.T01 AT5G45920 60.976 205 40 3 5 209 3 167 7.20e-80 238
MsG0280006808.01.T01 AT5G45920 60.976 205 40 3 5 209 3 167 7.20e-80 238
MsG0280006808.01.T01 AT5G45920 60.976 205 40 3 5 209 3 167 3.09e-79 238
MsG0280006808.01.T01 AT5G45920 60.976 205 40 3 5 209 3 167 3.09e-79 238
MsG0280006808.01.T01 AT5G62930 45.545 202 70 4 5 206 2 163 1.49e-48 160
MsG0280006808.01.T01 AT5G62930 44.878 205 73 4 2 206 25 189 5.14e-48 159
MsG0280006808.01.T01 AT2G38180 33.171 205 90 5 5 209 6 163 1.76e-26 104
MsG0280006808.01.T01 AT3G11210 31.373 204 91 5 5 206 6 162 6.73e-25 99.0

Find 62 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGCTTCATTAGTCCTTTC+AGG 0.209931 2:+6589082 None:intergenic
CACGACTAGGTATTGTTTAT+TGG 0.262652 2:-6589249 MsG0280006808.01.T01:CDS
GTCAGGGAACTGTTGCATTT+TGG 0.294369 2:+6588992 None:intergenic
ATTCATTCGCTCTTGGTGGC+TGG 0.301653 2:-6593332 MsG0280006808.01.T01:CDS
CTCCATTGTCTCCTTCTTCA+AGG 0.304012 2:-6592918 MsG0280006808.01.T01:intron
TGTCTTCCTAATAGATGTTC+TGG 0.304397 2:-6592983 MsG0280006808.01.T01:CDS
TGAAAACCAGAACATCTATT+AGG 0.354588 2:+6592977 None:intergenic
TTCATTCGCTCTTGGTGGCT+GGG 0.362054 2:-6593331 MsG0280006808.01.T01:CDS
AAGGTGGGCGTTGAAGGTTT+TGG 0.386308 2:-6593089 MsG0280006808.01.T01:CDS
CAACACAAGGTGGGCGTTGA+AGG 0.406548 2:-6593095 MsG0280006808.01.T01:CDS
GTCCTTTCAGGAAGACCCTC+TGG 0.415276 2:+6589094 None:intergenic
CCCTCTGGATTATTCTCAAA+TGG 0.419053 2:+6589109 None:intergenic
AAGAAAACTGTCAAAGCAAC+AGG 0.453323 2:+6593022 None:intergenic
AAAATACCGTGCGAGAGAAA+TGG 0.454666 2:+6593292 None:intergenic
TAGTCGTGCAACTTCATCAA+TGG 0.457372 2:+6589264 None:intergenic
GAAGATTCATTCGCTCTTGG+TGG 0.458462 2:-6593336 MsG0280006808.01.T01:CDS
TCATTCGCTCTTGGTGGCTG+GGG 0.475685 2:-6593330 MsG0280006808.01.T01:CDS
ACTGAAGATTCATTCGCTCT+TGG 0.475807 2:-6593339 MsG0280006808.01.T01:CDS
CATATCCTTACATTGATCTC+TGG 0.480284 2:-6589016 MsG0280006808.01.T01:CDS
AAATGCAACAGTTCCCTGAC+TGG 0.492869 2:-6588989 MsG0280006808.01.T01:CDS
ATGAGGATGACTTTACTTGT+CGG 0.494758 2:+6589298 None:intergenic
TTTCCTGTGTCAAAGGGTGA+TGG 0.502079 2:-6593058 MsG0280006808.01.T01:CDS
CAGGCAGATGTGGTGCTAAG+AGG 0.513358 2:-6590562 MsG0280006808.01.T01:CDS
AGGCAGATGTGGTGCTAAGA+GGG 0.519656 2:-6590561 MsG0280006808.01.T01:CDS
GTTCCATCACCCTTTGACAC+AGG 0.519834 2:+6593055 None:intergenic
CAACACGAGGTGGGCACTGA+AGG 0.520803 2:-6590527 MsG0280006808.01.T01:CDS
AGTCGTGCAACTTCATCAAT+GGG 0.523524 2:+6589265 None:intergenic
CAATGGGAGGAGGAGTTATG+AGG 0.526221 2:+6589281 None:intergenic
TTGTCCTTGTATTCATGAAG+AGG 0.530113 2:+6592947 None:intergenic
TGCCAACCATTTCTCTCGCA+CGG 0.530292 2:-6593298 MsG0280006808.01.T01:intron
TTGGTCCAGAGATCAATGTA+AGG 0.532044 2:+6589011 None:intergenic
CTGTCACCGCCTTGTGACAC+AGG 0.536050 2:+6590488 None:intergenic
TCCTTGAATTTCAGAAGCGA+TGG 0.552678 2:-6589321 MsG0280006808.01.T01:intron
ATCCAGAGGGTCTTCCTGAA+AGG 0.553423 2:-6589096 MsG0280006808.01.T01:CDS
GTGGTGCTAAGAGGGTATAG+TGG 0.556252 2:-6590553 MsG0280006808.01.T01:CDS
TGTTCCTCTTCATGAATACA+AGG 0.574781 2:-6592951 MsG0280006808.01.T01:CDS
AAAATGGGTTACCTTGAAGA+AGG 0.576440 2:+6592907 None:intergenic
CAGAGTTTCCCTGTGTCACA+AGG 0.586633 2:-6590497 MsG0280006808.01.T01:CDS
CAGGCTGATGTAGTGCTAAG+AGG 0.587922 2:-6593130 MsG0280006808.01.T01:CDS
TGGTGCTAAGAGGGTATAGT+GGG 0.591667 2:-6590552 MsG0280006808.01.T01:CDS
ATTGATGAAGTTGCACGACT+AGG 0.591915 2:-6589262 MsG0280006808.01.T01:CDS
GAAAGGACTAATGAAGCTGC+TGG 0.598460 2:-6589079 MsG0280006808.01.T01:CDS
GCAACTTCATCAATGGGAGG+AGG 0.607044 2:+6589271 None:intergenic
TGTAAGGATATGACATTCAG+TGG 0.611844 2:+6589027 None:intergenic
TACCTTGAAGAAGGAGACAA+TGG 0.615115 2:+6592916 None:intergenic
GAGGTGGGCACTGAAGGTGT+TGG 0.628300 2:-6590521 MsG0280006808.01.T01:CDS
CCATTTGAGAATAATCCAGA+GGG 0.637647 2:-6589109 MsG0280006808.01.T01:CDS
TGTCACCGCCTTGTGACACA+GGG 0.640635 2:+6590489 None:intergenic
ACATCAACATGACGACGACA+AGG 0.641156 2:-6593392 None:intergenic
TACCGTGCGAGAGAAATGGT+TGG 0.653524 2:+6593296 None:intergenic
TGCTAGAGCATGCATTGCTG+TGG 0.657710 2:-6589050 MsG0280006808.01.T01:CDS
TAACATGTAACAGGCAGATG+TGG 0.662178 2:-6590572 MsG0280006808.01.T01:intron
TCCATTTGAGAATAATCCAG+AGG 0.677789 2:-6589110 MsG0280006808.01.T01:CDS
CGTGCAACTTCATCAATGGG+AGG 0.678164 2:+6589268 None:intergenic
GATACAGTGGTTACAACACA+AGG 0.682791 2:-6593108 MsG0280006808.01.T01:CDS
ACAGTGGTTACAACACAAGG+TGG 0.682965 2:-6593105 MsG0280006808.01.T01:CDS
CAGTGGTTACAACACAAGGT+GGG 0.688949 2:-6593104 MsG0280006808.01.T01:CDS
GGTATAGTGGGTACAACACG+AGG 0.696277 2:-6590540 MsG0280006808.01.T01:CDS
TAGTGGGTACAACACGAGGT+GGG 0.715177 2:-6590536 MsG0280006808.01.T01:CDS
GTAGTGCTAAGAGGATACAG+TGG 0.721583 2:-6593121 MsG0280006808.01.T01:CDS
AGTTTCCCTGTGTCACAAGG+CGG 0.731308 2:-6590494 MsG0280006808.01.T01:intron
ATAGTGGGTACAACACGAGG+TGG 0.732833 2:-6590537 MsG0280006808.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTATTTTTTTTATT+GGG + Chr2:6590809-6590828 None:intergenic 0.0%
!!! TTTTATTTTATTTTTTTTAT+TGG + Chr2:6590810-6590829 None:intergenic 0.0%
!! AAATAATCATATTACAATTT+GGG + Chr2:6591444-6591463 None:intergenic 10.0%
!! AATCTAAAAAAAAAATTCTA+GGG - Chr2:6590956-6590975 MsG0280006808.01.T01:intron 10.0%
!! TAAATAATCATATTACAATT+TGG + Chr2:6591445-6591464 None:intergenic 10.0%
!! TAATCTAAAAAAAAAATTCT+AGG - Chr2:6590955-6590974 MsG0280006808.01.T01:intron 10.0%
!!! AATATTTTAATTTCAATACT+AGG - Chr2:6592977-6592996 MsG0280006808.01.T01:CDS 10.0%
!!! TACATTTTATAATATTTATC+TGG - Chr2:6591083-6591102 MsG0280006808.01.T01:intron 10.0%
!!! TTATTTTATGTATGTATATA+AGG - Chr2:6589633-6589652 MsG0280006808.01.T01:intron 10.0%
!! AAAATCTAAAAACATAATGT+GGG + Chr2:6591695-6591714 None:intergenic 15.0%
!! AATAATAACCCTTAAAAAAA+GGG + Chr2:6591038-6591057 None:intergenic 15.0%
!! AATTTATGTTTAATGTGTAT+TGG + Chr2:6590214-6590233 None:intergenic 15.0%
!! ATGATTTATATATATTGTCT+GGG - Chr2:6590390-6590409 MsG0280006808.01.T01:intron 15.0%
!! GAATAAAATTAGAGTTTAAT+GGG - Chr2:6592058-6592077 MsG0280006808.01.T01:intron 15.0%
!! TAAAATCTAAAAACATAATG+TGG + Chr2:6591696-6591715 None:intergenic 15.0%
!! TGAATAAAATTAGAGTTTAA+TGG - Chr2:6592057-6592076 MsG0280006808.01.T01:intron 15.0%
!! TTTAGATATAAATTCTATAG+AGG - Chr2:6593183-6593202 MsG0280006808.01.T01:intron 15.0%
!! TTTATAACAAACATATAATG+TGG + Chr2:6591385-6591404 None:intergenic 15.0%
!! AAGACTAATTATTTGTCATT+TGG - Chr2:6590349-6590368 MsG0280006808.01.T01:intron 20.0%
!! AATTATACCATTTATACAAG+AGG + Chr2:6593003-6593022 None:intergenic 20.0%
!! AATTGAATGTAAACACATAT+CGG + Chr2:6589514-6589533 None:intergenic 20.0%
!! ACACATTAAACATAAATTGT+TGG - Chr2:6590216-6590235 MsG0280006808.01.T01:intron 20.0%
!! GAATAATAACCCTTAAAAAA+AGG + Chr2:6591039-6591058 None:intergenic 20.0%
!! GATGATTTATATATATTGTC+TGG - Chr2:6590389-6590408 MsG0280006808.01.T01:intron 20.0%
!! TATACCTACATATACATTTA+AGG + Chr2:6592943-6592962 None:intergenic 20.0%
!! TCTTGTATAAATGGTATAAT+TGG - Chr2:6593002-6593021 MsG0280006808.01.T01:CDS 20.0%
!! TGATTTATATATATTGTCTG+GGG - Chr2:6590391-6590410 MsG0280006808.01.T01:intron 20.0%
!! TTATCCTTAAATGTATATGT+AGG - Chr2:6592936-6592955 MsG0280006808.01.T01:CDS 20.0%
!!! AAAAATTGATAGTGATTGAA+TGG - Chr2:6589776-6589795 MsG0280006808.01.T01:intron 20.0%
!!! AAGTTTGAATCTTTTTGTAA+TGG - Chr2:6591721-6591740 MsG0280006808.01.T01:intron 20.0%
!!! AATTTTATTCAAACTCTGTA+CGG + Chr2:6592048-6592067 None:intergenic 20.0%
!!! AGTTTGAATCTTTTTGTAAT+GGG - Chr2:6591722-6591741 MsG0280006808.01.T01:intron 20.0%
!!! CACATGTAATTATACTATTT+TGG - Chr2:6589854-6589873 MsG0280006808.01.T01:intron 20.0%
!!! CTATTAAACCCTTTTTTTAA+GGG - Chr2:6591027-6591046 MsG0280006808.01.T01:intron 20.0%
!!! GTAATTATACTATTTTGGTT+TGG - Chr2:6589859-6589878 MsG0280006808.01.T01:intron 20.0%
!!! TAGTTTGAATAAAGTGTTAA+TGG - Chr2:6589675-6589694 MsG0280006808.01.T01:intron 20.0%
! AAAGAACAATGATCCTTTAT+TGG + Chr2:6592142-6592161 None:intergenic 25.0%
! AAGAACAATGATCCTTTATT+GGG + Chr2:6592141-6592160 None:intergenic 25.0%
! AATTTGGAGGTTAATACAAT+AGG - Chr2:6592464-6592483 MsG0280006808.01.T01:intron 25.0%
! ATAGTATAATTACATGTGTC+AGG + Chr2:6589852-6589871 None:intergenic 25.0%
! ATATCTTGATCCTTAAAGAA+AGG + Chr2:6592828-6592847 None:intergenic 25.0%
! CAATCAATAAATAGTGTTAC+TGG - Chr2:6589944-6589963 MsG0280006808.01.T01:intron 25.0%
! CAATTATGTTATCGTTTGTT+TGG - Chr2:6592721-6592740 MsG0280006808.01.T01:intron 25.0%
! CCTTAAAAAAAGGGTTTAAT+AGG + Chr2:6591029-6591048 None:intergenic 25.0%
! TATCTTGATCCTTAAAGAAA+GGG + Chr2:6592827-6592846 None:intergenic 25.0%
! TATTATTGATCATACAGTAG+TGG + Chr2:6592519-6592538 None:intergenic 25.0%
! TCACCAAAAAGATATATTTG+TGG + Chr2:6591219-6591238 None:intergenic 25.0%
! TCTGCTTATAACATTCTTAA+AGG - Chr2:6592847-6592866 MsG0280006808.01.T01:intron 25.0%
! TTAGTCATGTTTGAAAGAAA+TGG + Chr2:6591192-6591211 None:intergenic 25.0%
! TTATAATGTTTGTAAAGCTG+TGG - Chr2:6592378-6592397 MsG0280006808.01.T01:intron 25.0%
! TTATGTTTAATGTGTATTGG+TGG + Chr2:6590211-6590230 None:intergenic 25.0%
! TTCTTCTTTCTCTTTCATAA+GGG + Chr2:6590073-6590092 None:intergenic 25.0%
! TTTCTTCTTTCTCTTTCATA+AGG + Chr2:6590074-6590093 None:intergenic 25.0%
!! AAATAGTGTTACTGGTATAT+TGG - Chr2:6589952-6589971 MsG0280006808.01.T01:intron 25.0%
!! AATAGTGTTACTGGTATATT+GGG - Chr2:6589953-6589972 MsG0280006808.01.T01:intron 25.0%
!! ACTAATTATTTGTCATTTGG+TGG - Chr2:6590352-6590371 MsG0280006808.01.T01:intron 25.0%
!! ATTTTATTCAAACTCTGTAC+GGG + Chr2:6592047-6592066 None:intergenic 25.0%
!! CTAAAAAAAAAATTCTAGGG+TGG - Chr2:6590959-6590978 MsG0280006808.01.T01:intron 25.0%
!! CTAATTATTTGTCATTTGGT+GGG - Chr2:6590353-6590372 MsG0280006808.01.T01:intron 25.0%
!! GTTTGAATCTTTTTGTAATG+GGG - Chr2:6591723-6591742 MsG0280006808.01.T01:intron 25.0%
!! TAATTATTTGTCATTTGGTG+GGG - Chr2:6590354-6590373 MsG0280006808.01.T01:intron 25.0%
!! TTTTCTGTATTTCTTGTGAT+GGG - Chr2:6589144-6589163 MsG0280006808.01.T01:intron 25.0%
!! TTTTTCTGTATTTCTTGTGA+TGG - Chr2:6589143-6589162 MsG0280006808.01.T01:intron 25.0%
!!! AAATAAACTTTTTTCCAGTC+AGG + Chr2:6593385-6593404 None:intergenic 25.0%
!!! AATAAACTTTTTTCCAGTCA+GGG + Chr2:6593384-6593403 None:intergenic 25.0%
!!! AGTTTGAAGCTTTTTGTAAT+TGG - Chr2:6589186-6589205 MsG0280006808.01.T01:intron 25.0%
!!! CCTATTAAACCCTTTTTTTA+AGG - Chr2:6591026-6591045 MsG0280006808.01.T01:intron 25.0%
!!! GTTTGAAGCTTTTTGTAATT+GGG - Chr2:6589187-6589206 MsG0280006808.01.T01:intron 25.0%
!!! TATTTTGGTTTGGATTATAG+CGG - Chr2:6589869-6589888 MsG0280006808.01.T01:intron 25.0%
!!! TCTTTTGAAAAGGATAAATG+AGG - Chr2:6591754-6591773 MsG0280006808.01.T01:intron 25.0%
!!! TTTGAAGCTTTTTGTAATTG+GGG - Chr2:6589188-6589207 MsG0280006808.01.T01:intron 25.0%
AAAAGGTCACCTATATTACA+AGG - Chr2:6590989-6591008 MsG0280006808.01.T01:intron 30.0%
AAACGATAACATAATTGCAC+AGG + Chr2:6592718-6592737 None:intergenic 30.0%
AAAGCAAAACAAAGCAAGAA+TGG + Chr2:6591319-6591338 None:intergenic 30.0%
AAAGGATCATTGTTCTTTAG+TGG - Chr2:6592144-6592163 MsG0280006808.01.T01:intron 30.0%
AAATAGTCTTTGATCTCTTG+TGG - Chr2:6592197-6592216 MsG0280006808.01.T01:intron 30.0%
AAGAAAACAGTCAAAGCAAT+CGG + Chr2:6591911-6591930 None:intergenic 30.0%
ACAATAGGTGATGTTAAATG+TGG - Chr2:6592479-6592498 MsG0280006808.01.T01:intron 30.0%
ACTAAACTTACACATTGACA+AGG - Chr2:6589742-6589761 MsG0280006808.01.T01:intron 30.0%
AGAGAAGAATAATCTCCAAT+TGG + Chr2:6590884-6590903 None:intergenic 30.0%
ATGAACATTGATCAACCTAT+GGG + Chr2:6592897-6592916 None:intergenic 30.0%
ATGTTTGAAAGAAATGGAAG+AGG + Chr2:6591186-6591205 None:intergenic 30.0%
ATTATTCTTCTCTGAGTCAT+TGG - Chr2:6590891-6590910 MsG0280006808.01.T01:intron 30.0%
ATTATTGATCACAACACAAG+TGG + Chr2:6590551-6590570 None:intergenic 30.0%
CACATTCTAATAATGTTGCA+TGG - Chr2:6592301-6592320 MsG0280006808.01.T01:intron 30.0%
CTCGTAAAATGAAGATTCTT+TGG + Chr2:6590931-6590950 None:intergenic 30.0%
GTTTGTTTGTAACATGTAAC+AGG - Chr2:6591776-6591795 MsG0280006808.01.T01:intron 30.0%
TATGTATACTTGTGACATTG+TGG + Chr2:6590040-6590059 None:intergenic 30.0%
TCACCGAAAAGAAAAATCTT+TGG + Chr2:6588991-6589010 None:intergenic 30.0%
TGAAAACCAGAACATCTATT+AGG + Chr2:6589383-6589402 None:intergenic 30.0%
TGAGAATGTAGTTATTGTAG+TGG - Chr2:6591110-6591129 MsG0280006808.01.T01:intron 30.0%
TGAGTTTATAAGTGTGAAAC+TGG - Chr2:6591500-6591519 MsG0280006808.01.T01:intron 30.0%
TGTTTGAAAGAAATGGAAGA+GGG + Chr2:6591185-6591204 None:intergenic 30.0%
TTATTCTTCTCTGAGTCATT+GGG - Chr2:6590892-6590911 MsG0280006808.01.T01:intron 30.0%
TTCTTTCAAACATGACTAAG+AGG - Chr2:6591193-6591212 MsG0280006808.01.T01:intron 30.0%
TTGACATCACCTATTCTAAA+AGG + Chr2:6590476-6590495 None:intergenic 30.0%
! AGGCCAAAGATTTTTCTTTT+CGG - Chr2:6588985-6589004 MsG0280006808.01.T01:CDS 30.0%
! AGGCCACAAATATATCTTTT+TGG - Chr2:6591213-6591232 MsG0280006808.01.T01:intron 30.0%
! ATTGCTTTGACTGTTTTCTT+TGG - Chr2:6591911-6591930 MsG0280006808.01.T01:intron 30.0%
! CAAAGAATCTTCATTTTACG+AGG - Chr2:6590929-6590948 MsG0280006808.01.T01:intron 30.0%
! TGACATCACCTATTCTAAAA+GGG + Chr2:6590475-6590494 None:intergenic 30.0%
! TTGCTTTGACAGTTTTCTTT+GGG - Chr2:6589339-6589358 MsG0280006808.01.T01:intron 30.0%
! TTGCTTTGACTGTTTTCTTT+GGG - Chr2:6591912-6591931 MsG0280006808.01.T01:intron 30.0%
! TTGTAATATAGGTGACCTTT+TGG + Chr2:6590990-6591009 None:intergenic 30.0%
! TTTATTAGTCTCATCGTGTT+AGG - Chr2:6591413-6591432 MsG0280006808.01.T01:intron 30.0%
!! AATTGATAGTGATTGAATGG+AGG - Chr2:6589779-6589798 MsG0280006808.01.T01:intron 30.0%
!! GGTTTGTGTTTCTTTTGAAA+AGG - Chr2:6591744-6591763 MsG0280006808.01.T01:intron 30.0%
!! TTTCATGCTTTTTGTGTAAG+TGG - Chr2:6590593-6590612 MsG0280006808.01.T01:intron 30.0%
!!! AAAATTAGTTTTGACCCTTG+TGG - Chr2:6590278-6590297 MsG0280006808.01.T01:intron 30.0%
!!! AAATTAGTTTTGACCCTTGT+GGG - Chr2:6590279-6590298 MsG0280006808.01.T01:intron 30.0%
!!! AAGTTTTTTTTACACTTGCG+TGG - Chr2:6592871-6592890 MsG0280006808.01.T01:intron 30.0%
AAAAGTCACTTGTGACATTG+TGG - Chr2:6590091-6590110 MsG0280006808.01.T01:intron 35.0%
AAAATACTTCGGTGACATTG+TGG - Chr2:6589997-6590016 MsG0280006808.01.T01:intron 35.0%
AAGAAAACTGTCAAAGCAAC+AGG + Chr2:6589338-6589357 None:intergenic 35.0%
AAGAATGGTCCCTTTCTTTA+AGG - Chr2:6592815-6592834 MsG0280006808.01.T01:intron 35.0%
AAGCATGGAATCAAACTCTT+TGG + Chr2:6592548-6592567 None:intergenic 35.0%
AAGTGTCTGATCTTGATCAA+AGG - Chr2:6591607-6591626 MsG0280006808.01.T01:intron 35.0%
ACAAGGCCAAAACCAATATT+TGG + Chr2:6590420-6590439 None:intergenic 35.0%
ACTGTGTTGAAACCCAATAA+AGG - Chr2:6592126-6592145 MsG0280006808.01.T01:intron 35.0%
AGCATGAAACTAACATCTGT+AGG + Chr2:6590166-6590185 None:intergenic 35.0%
AGGAATTGAATTGGAGAAGT+AGG - Chr2:6590448-6590467 MsG0280006808.01.T01:intron 35.0%
AGTAACTCACGTTTCTTTAG+TGG - Chr2:6590244-6590263 MsG0280006808.01.T01:intron 35.0%
AGTAATGGCACAAAGAAAGA+AGG + Chr2:6592690-6592709 None:intergenic 35.0%
ATACCCTGTCCTTGTAATAT+AGG + Chr2:6591001-6591020 None:intergenic 35.0%
ATGAGGATGACTTTACTTGT+CGG + Chr2:6593062-6593081 None:intergenic 35.0%
ATTCATTGGAATCACGCATT+CGG - Chr2:6591532-6591551 MsG0280006808.01.T01:intron 35.0%
CATATCCTTACATTGATCTC+TGG - Chr2:6593341-6593360 MsG0280006808.01.T01:CDS 35.0%
CATGAACATTGATCAACCTA+TGG + Chr2:6592898-6592917 None:intergenic 35.0%
CCATTTGAGAATAATCCAGA+GGG - Chr2:6593248-6593267 MsG0280006808.01.T01:intron 35.0%
CTACAGATGGGAAAATACTT+CGG - Chr2:6589986-6590005 MsG0280006808.01.T01:intron 35.0%
GGAATTGAATTGGAGAAGTA+GGG - Chr2:6590449-6590468 MsG0280006808.01.T01:intron 35.0%
GGTTGAATGTAACTACAGAT+GGG - Chr2:6589974-6589993 MsG0280006808.01.T01:intron 35.0%
TACTAGGCCTCTTGTATAAA+TGG - Chr2:6592993-6593012 MsG0280006808.01.T01:CDS 35.0%
TATACTTGTGACATTGTGGT+TGG + Chr2:6590036-6590055 None:intergenic 35.0%
TCACCTATATTACAAGGACA+GGG - Chr2:6590995-6591014 MsG0280006808.01.T01:intron 35.0%
TCATGTGAGCTGTTAAGTAT+AGG - Chr2:6592746-6592765 MsG0280006808.01.T01:intron 35.0%
TCCATTTGAGAATAATCCAG+AGG - Chr2:6593247-6593266 MsG0280006808.01.T01:intron 35.0%
TCTCCTTGTATTCATGTAGA+GGG + Chr2:6591985-6592004 None:intergenic 35.0%
TGATTCTCGCTAAATTTACG+TGG + Chr2:6589915-6589934 None:intergenic 35.0%
TGTAAGGATATGACATTCAG+TGG + Chr2:6593333-6593352 None:intergenic 35.0%
TGTCTTCCTAATAGATGTTC+TGG - Chr2:6589374-6589393 MsG0280006808.01.T01:intron 35.0%
TGTTCCTCTTCATGAATACA+AGG - Chr2:6589406-6589425 MsG0280006808.01.T01:intron 35.0%
TTCTCCTTGTATTCATGTAG+AGG + Chr2:6591986-6592005 None:intergenic 35.0%
TTGTCCTTGTATTCATGAAG+AGG + Chr2:6589413-6589432 None:intergenic 35.0%
! AGAAAGAAGGCATGATGTTT+AGG + Chr2:6592677-6592696 None:intergenic 35.0%
! CACGACTAGGTATTGTTTAT+TGG - Chr2:6593108-6593127 MsG0280006808.01.T01:CDS 35.0%
! CTAGCTGTTGATAGAATAGA+AGG - Chr2:6589814-6589833 MsG0280006808.01.T01:intron 35.0%
! TCTTCAAGGTAACCCATTTT+CGG - Chr2:6589453-6589472 MsG0280006808.01.T01:intron 35.0%
! TCTTTCTTTGTGCCATTACT+TGG - Chr2:6592690-6592709 MsG0280006808.01.T01:intron 35.0%
! TGCTTTGACAGTTTTCTTTG+GGG - Chr2:6589340-6589359 MsG0280006808.01.T01:intron 35.0%
! TGCTTTGACTGTTTTCTTTG+GGG - Chr2:6591913-6591932 MsG0280006808.01.T01:intron 35.0%
! TTGATTCCATGCTTTTCTGT+GGG - Chr2:6592554-6592573 MsG0280006808.01.T01:intron 35.0%
! TTTGATTCCATGCTTTTCTG+TGG - Chr2:6592553-6592572 MsG0280006808.01.T01:intron 35.0%
!! AAAATGGGTTACCTTGAAGA+AGG + Chr2:6589453-6589472 None:intergenic 35.0%
!! AAATCTATGAAGCATCGACA+AGG + Chr2:6589593-6589612 None:intergenic 35.0%
!! GTTGCTTTGACAGTTTTCTT+TGG - Chr2:6589338-6589357 MsG0280006808.01.T01:intron 35.0%
!! TAGCGGATTCTACTAAATCA+TGG - Chr2:6589886-6589905 MsG0280006808.01.T01:intron 35.0%
!!! AAATATTGGTTTTGGCCTTG+TGG - Chr2:6590419-6590438 MsG0280006808.01.T01:intron 35.0%
!!! AATATTGGTTTTGGCCTTGT+GGG - Chr2:6590420-6590439 MsG0280006808.01.T01:intron 35.0%
!!! TTTTTTTATTGGGGTACACG+TGG + Chr2:6590799-6590818 None:intergenic 35.0%
AAAATACCGTGCGAGAGAAA+TGG + Chr2:6589068-6589087 None:intergenic 40.0%
AAATTCCTGAAATCCCACCA+GGG + Chr2:6592449-6592468 None:intergenic 40.0%
AATCCTTTGATGTTGGAGGA+TGG - Chr2:6591253-6591272 MsG0280006808.01.T01:intron 40.0%
AATGGGTATGCACACAATGA+GGG - Chr2:6592075-6592094 MsG0280006808.01.T01:intron 40.0%
AATTACATGTGTCAGGACAC+CGG + Chr2:6589845-6589864 None:intergenic 40.0%
ACTGAAGATTCATTCGCTCT+TGG - Chr2:6589018-6589037 MsG0280006808.01.T01:CDS 40.0%
ACTGAGGAATCCTTTGATGT+TGG - Chr2:6591246-6591265 MsG0280006808.01.T01:intron 40.0%
ACTGGATTCCATGCATTCAT+TGG - Chr2:6591518-6591537 MsG0280006808.01.T01:intron 40.0%
AGTCGTGCAACTTCATCAAT+GGG + Chr2:6593095-6593114 None:intergenic 40.0%
ATAGGCATGCATGTTAGCAA+TGG - Chr2:6592764-6592783 MsG0280006808.01.T01:intron 40.0%
ATCCTTTGATGTTGGAGGAT+GGG - Chr2:6591254-6591273 MsG0280006808.01.T01:intron 40.0%
ATTCAAACTCTGTACGGGTA+TGG + Chr2:6592042-6592061 None:intergenic 40.0%
ATTGATGAAGTTGCACGACT+AGG - Chr2:6593095-6593114 MsG0280006808.01.T01:CDS 40.0%
ATTGCACAGGAACCAAGTAA+TGG + Chr2:6592705-6592724 None:intergenic 40.0%
CCCTCTGGATTATTCTCAAA+TGG + Chr2:6593251-6593270 None:intergenic 40.0%
CGGATTCTACTAAATCATGG+AGG - Chr2:6589889-6589908 MsG0280006808.01.T01:intron 40.0%
CTCAAATTGTCGACCACTTA+TGG + Chr2:6591663-6591682 None:intergenic 40.0%
GAGAACGAAAAGTTTCTCTC+TGG - Chr2:6592353-6592372 MsG0280006808.01.T01:intron 40.0%
GATACAGTGGTTACAACACA+AGG - Chr2:6589249-6589268 MsG0280006808.01.T01:CDS 40.0%
GCTACAAAGCTACCGAAAAT+GGG + Chr2:6589468-6589487 None:intergenic 40.0%
GGGTTATTGTGTTGTGTATC+AGG - Chr2:6589208-6589227 MsG0280006808.01.T01:intron 40.0%
GGGTTGAATGTAACTACAGA+TGG - Chr2:6589973-6589992 MsG0280006808.01.T01:intron 40.0%
GTACGAGATGCTTGTGTAAA+AGG - Chr2:6592587-6592606 MsG0280006808.01.T01:intron 40.0%
GTCACCTATATTACAAGGAC+AGG - Chr2:6590994-6591013 MsG0280006808.01.T01:intron 40.0%
GTGATGTTAAATGTGGACTC+TGG - Chr2:6592486-6592505 MsG0280006808.01.T01:intron 40.0%
GTGGATTTGATAAGTGTGCT+TGG - Chr2:6592216-6592235 MsG0280006808.01.T01:intron 40.0%
TAACATGTAACAGGCAGATG+TGG - Chr2:6591785-6591804 MsG0280006808.01.T01:intron 40.0%
TACCTTGAAGAAGGAGACAA+TGG + Chr2:6589444-6589463 None:intergenic 40.0%
TAGGCATGCATGTTAGCAAT+GGG - Chr2:6592765-6592784 MsG0280006808.01.T01:intron 40.0%
TAGTCGTGCAACTTCATCAA+TGG + Chr2:6593096-6593115 None:intergenic 40.0%
TCAAATTAACACACGTGCAG+TGG - Chr2:6590492-6590511 MsG0280006808.01.T01:intron 40.0%
TCCTTGAATTTCAGAAGCGA+TGG - Chr2:6593036-6593055 MsG0280006808.01.T01:CDS 40.0%
TGCTACAAAGCTACCGAAAA+TGG + Chr2:6589469-6589488 None:intergenic 40.0%
TGGGGTTTCAGGAATTGAAT+TGG - Chr2:6590439-6590458 MsG0280006808.01.T01:intron 40.0%
TGTCCCTCTACATGAATACA+AGG - Chr2:6591979-6591998 MsG0280006808.01.T01:intron 40.0%
TTCAAACTCTGTACGGGTAT+GGG + Chr2:6592041-6592060 None:intergenic 40.0%
TTCATTGGAATCACGCATTC+GGG - Chr2:6591533-6591552 MsG0280006808.01.T01:intron 40.0%
TTCTTCCACTCCTAAAGTAG+AGG + Chr2:6592800-6592819 None:intergenic 40.0%
TTGGTCCAGAGATCAATGTA+AGG + Chr2:6593349-6593368 None:intergenic 40.0%
! AAGGGTTTTTCCTGTGTCAA+AGG - Chr2:6589292-6589311 MsG0280006808.01.T01:CDS 40.0%
! AGGGTTTTTCCTGTGTCAAA+GGG - Chr2:6589293-6589312 MsG0280006808.01.T01:CDS 40.0%
! ATGGTATCGAAACCCAGAAA+AGG - Chr2:6589694-6589713 MsG0280006808.01.T01:intron 40.0%
! CTACTTTAGGAGTGGAAGAA+TGG - Chr2:6592800-6592819 MsG0280006808.01.T01:intron 40.0%
! GATAGAATAGAAGGCATGTC+CGG - Chr2:6589823-6589842 MsG0280006808.01.T01:intron 40.0%
! TAATGGGTATGCACACAATG+AGG - Chr2:6592074-6592093 MsG0280006808.01.T01:intron 40.0%
! TATTTGTCATTTGGTGGGGT+TGG - Chr2:6590358-6590377 MsG0280006808.01.T01:intron 40.0%
! TGAAAAGCAGAGCATCTACT+GGG + Chr2:6591956-6591975 None:intergenic 40.0%
! TGGTATCGAAACCCAGAAAA+GGG - Chr2:6589695-6589714 MsG0280006808.01.T01:intron 40.0%
! TTGAAAAGCAGAGCATCTAC+TGG + Chr2:6591957-6591976 None:intergenic 40.0%
!! TTTTGGTGACTCAATCACTG+AGG - Chr2:6591230-6591249 MsG0280006808.01.T01:intron 40.0%
!!! AAGTAGGGCCCTTTTAGAAT+AGG - Chr2:6590464-6590483 MsG0280006808.01.T01:intron 40.0%
!!! ATATTGGTTTTGGCCTTGTG+GGG - Chr2:6590421-6590440 MsG0280006808.01.T01:intron 40.0%
!!! GGGTAGCCAAATATTGGTTT+TGG - Chr2:6590411-6590430 MsG0280006808.01.T01:intron 40.0%
AAATGCAACAGTTCCCTGAC+TGG - Chr2:6593368-6593387 MsG0280006808.01.T01:CDS 45.0%
AATACCTGAATGCGAAGAGC+CGG - Chr2:6591635-6591654 MsG0280006808.01.T01:intron 45.0%
ACAGTGACATAGAAACCTGC+TGG + Chr2:6589117-6589136 None:intergenic 45.0%
ACAGTGGTTACAACACAAGG+TGG - Chr2:6589252-6589271 MsG0280006808.01.T01:CDS 45.0%
ACATCTGTAGGAGTAGCACT+TGG + Chr2:6590154-6590173 None:intergenic 45.0%
ACGGCTATAGTGTAGGACTA+GGG - Chr2:6592409-6592428 MsG0280006808.01.T01:intron 45.0%
AGAAGGAGACAATGGAGCAA+AGG + Chr2:6589436-6589455 None:intergenic 45.0%
AGGCATGCATGTTAGCAATG+GGG - Chr2:6592766-6592785 MsG0280006808.01.T01:intron 45.0%
AGTTTGCACGAGATGCTTCT+CGG - Chr2:6590623-6590642 MsG0280006808.01.T01:intron 45.0%
ATCGAAACCCAGAAAAGGGT+TGG - Chr2:6589699-6589718 MsG0280006808.01.T01:intron 45.0%
ATTGGGCATGACACAGACAT+TGG + Chr2:6589568-6589587 None:intergenic 45.0%
CAAAGCAATCGGAGCAGTTT+CGG + Chr2:6591900-6591919 None:intergenic 45.0%
CAAATTCCTGAAATCCCACC+AGG + Chr2:6592450-6592469 None:intergenic 45.0%
CACGCTTATCAAACCCACAA+GGG + Chr2:6590295-6590314 None:intergenic 45.0%
CAGTGACATAGAAACCTGCT+GGG + Chr2:6589116-6589135 None:intergenic 45.0%
CAGTGGTTACAACACAAGGT+GGG - Chr2:6589253-6589272 MsG0280006808.01.T01:CDS 45.0%
CATCTGTAGGAGTAGCACTT+GGG + Chr2:6590153-6590172 None:intergenic 45.0%
CTCCATTGTCTCCTTCTTCA+AGG - Chr2:6589439-6589458 MsG0280006808.01.T01:intron 45.0%
CTGGTGGGATTTCAGGAATT+TGG - Chr2:6592448-6592467 MsG0280006808.01.T01:intron 45.0%
CTTGGTCGCGTATATATTGC+AGG - Chr2:6592234-6592253 MsG0280006808.01.T01:intron 45.0%
GAAACCTGCTGGGTTGTTAA+AGG + Chr2:6589106-6589125 None:intergenic 45.0%
GAAAGGACTAATGAAGCTGC+TGG - Chr2:6593278-6593297 MsG0280006808.01.T01:intron 45.0%
GAAGATTCATTCGCTCTTGG+TGG - Chr2:6589021-6589040 MsG0280006808.01.T01:CDS 45.0%
GAGGAATCCTTTGATGTTGG+AGG - Chr2:6591249-6591268 MsG0280006808.01.T01:intron 45.0%
GCAGCTTCATTAGTCCTTTC+AGG + Chr2:6593278-6593297 None:intergenic 45.0%
GCGTGATTCCAATGAATGCA+TGG + Chr2:6591529-6591548 None:intergenic 45.0%
GGGAAACCAACCTCTACTTT+AGG - Chr2:6592787-6592806 MsG0280006808.01.T01:intron 45.0%
GTAGTGCTAAGAGGATACAG+TGG - Chr2:6589236-6589255 MsG0280006808.01.T01:CDS 45.0%
GTATGCACACAATGAGGGAT+TGG - Chr2:6592080-6592099 MsG0280006808.01.T01:intron 45.0%
GTCACTTGTGACATTGTGGT+TGG - Chr2:6590095-6590114 MsG0280006808.01.T01:intron 45.0%
GTGGGATTTCAGGAATTTGG+AGG - Chr2:6592451-6592470 MsG0280006808.01.T01:intron 45.0%
TACCGTGCGTGAGAAATAGT+TGG + Chr2:6591292-6591311 None:intergenic 45.0%
TACTTCGGTGACATTGTGGT+TGG - Chr2:6590001-6590020 MsG0280006808.01.T01:intron 45.0%
TCAATTCCTGAAACCCCACA+AGG + Chr2:6590437-6590456 None:intergenic 45.0%
TCCACTCCTAAAGTAGAGGT+TGG + Chr2:6592796-6592815 None:intergenic 45.0%
TCCATTCCCACAGAAAAGCA+TGG + Chr2:6592563-6592582 None:intergenic 45.0%
TCCTTTGATGTTGGAGGATG+GGG - Chr2:6591255-6591274 MsG0280006808.01.T01:intron 45.0%
TCTCTGAGTCATTGGGTCAT+GGG - Chr2:6590899-6590918 MsG0280006808.01.T01:intron 45.0%
TCTTCCTTTAACAACCCAGC+AGG - Chr2:6589099-6589118 MsG0280006808.01.T01:CDS 45.0%
TTCTCTGAGTCATTGGGTCA+TGG - Chr2:6590898-6590917 MsG0280006808.01.T01:intron 45.0%
TTGTCGACCACTTATGGATC+CGG + Chr2:6591657-6591676 None:intergenic 45.0%
TTGTTCTTTAGTGGCACAGC+AGG - Chr2:6592153-6592172 MsG0280006808.01.T01:intron 45.0%
TTTCCTGTGTCAAAGGGTGA+TGG - Chr2:6589299-6589318 MsG0280006808.01.T01:CDS 45.0%
! ACCAACCTCTACTTTAGGAG+TGG - Chr2:6592792-6592811 MsG0280006808.01.T01:intron 45.0%
! AGACAGTACCAACCCTTTTC+TGG + Chr2:6589710-6589729 None:intergenic 45.0%
! AGGGATTGGCACAGATTATC+AGG - Chr2:6592094-6592113 MsG0280006808.01.T01:intron 45.0%
! CTTTTCTGTGGGAATGGAGT+TGG - Chr2:6592565-6592584 MsG0280006808.01.T01:intron 45.0%
! GACAGTACCAACCCTTTTCT+GGG + Chr2:6589709-6589728 None:intergenic 45.0%
! GGTATGGGTTACCTTGAAGA+AGG + Chr2:6592026-6592045 None:intergenic 45.0%
! GTCAGGGAACTGTTGCATTT+TGG + Chr2:6593368-6593387 None:intergenic 45.0%
! TCCATGCTTTTCTGTGGGAA+TGG - Chr2:6592559-6592578 MsG0280006808.01.T01:intron 45.0%
! TCTAGGGTGGCAAAACCAAA+AGG - Chr2:6590972-6590991 MsG0280006808.01.T01:intron 45.0%
! TGACATTGTGGTGGTGACAT+TGG + Chr2:6590130-6590149 None:intergenic 45.0%
! TGCCAACTATTTCTCACGCA+CGG - Chr2:6591287-6591306 MsG0280006808.01.T01:intron 45.0%
! TGGTGCTAAGAGGGTATAGT+GGG - Chr2:6591805-6591824 MsG0280006808.01.T01:intron 45.0%
! TGTCTGGGGTAGCCAAATAT+TGG - Chr2:6590405-6590424 MsG0280006808.01.T01:intron 45.0%
!! GAAGCATCGACAAGGACATT+GGG + Chr2:6589585-6589604 None:intergenic 45.0%
!! GACATTGTGGTTGGTGACAT+TGG - Chr2:6590010-6590029 MsG0280006808.01.T01:intron 45.0%
!! GCCATCGCTTCTGAAATTCA+AGG + Chr2:6593040-6593059 None:intergenic 45.0%
!! TCTTCGCATTCAGGTATTGG+TGG + Chr2:6591633-6591652 None:intergenic 45.0%
!! TGAAGCATCGACAAGGACAT+TGG + Chr2:6589586-6589605 None:intergenic 45.0%
!!! GGCGTTGAAGGTTTTGGAAA+GGG - Chr2:6589274-6589293 MsG0280006808.01.T01:CDS 45.0%
!! AAAAAAAAAATAAAAAATTC+TGG + Chr2:6590736-6590755 None:intergenic 5.0%
!! AAAAAAAAATTAAAAAATTC+TGG + Chr2:6590685-6590704 None:intergenic 5.0%
!! AATAAAAAAAATAAAAAAAG+TGG + Chr2:6592614-6592633 None:intergenic 5.0%
!! TAAATATTATAAAATGTATT+TGG + Chr2:6591081-6591100 None:intergenic 5.0%
!!! TAATAATTATTTTTCATTTT+TGG - Chr2:6592266-6592285 MsG0280006808.01.T01:intron 5.0%
!!! TTATTTTATTTTTTTTATTG+GGG + Chr2:6590808-6590827 None:intergenic 5.0%
ACAGTGCACGGCTATAGTGT+AGG - Chr2:6592402-6592421 MsG0280006808.01.T01:intron 50.0%
ACCCCATCCTCCAACATCAA+AGG + Chr2:6591259-6591278 None:intergenic 50.0%
AGTTTCCCTGTGTCACAAGG+CGG - Chr2:6591863-6591882 MsG0280006808.01.T01:intron 50.0%
ATCCAGAGGGTCTTCCTGAA+AGG - Chr2:6593261-6593280 MsG0280006808.01.T01:intron 50.0%
CAATGGGAGGAGGAGTTATG+AGG + Chr2:6593079-6593098 None:intergenic 50.0%
CACGGCTATAGTGTAGGACT+AGG - Chr2:6592408-6592427 MsG0280006808.01.T01:intron 50.0%
CAGAGTTTCCCTGTGTCACA+AGG - Chr2:6591860-6591879 MsG0280006808.01.T01:intron 50.0%
CAGGCTGATGTAGTGCTAAG+AGG - Chr2:6589227-6589246 MsG0280006808.01.T01:intron 50.0%
CGTGCAACTTCATCAATGGG+AGG + Chr2:6593092-6593111 None:intergenic 50.0%
CTCTGAGTCATTGGGTCATG+GGG - Chr2:6590900-6590919 MsG0280006808.01.T01:intron 50.0%
GCAACTTCATCAATGGGAGG+AGG + Chr2:6593089-6593108 None:intergenic 50.0%
GCACGCTTATCAAACCCACA+AGG + Chr2:6590296-6590315 None:intergenic 50.0%
GGCATGCATGTTAGCAATGG+GGG - Chr2:6592767-6592786 MsG0280006808.01.T01:intron 50.0%
GGCTCTTCGCATTCAGGTAT+TGG + Chr2:6591636-6591655 None:intergenic 50.0%
GTAGCACTTGGGTGACATTG+TGG + Chr2:6590142-6590161 None:intergenic 50.0%
GTTCCATCACCCTTTGACAC+AGG + Chr2:6589305-6589324 None:intergenic 50.0%
TAAAGCTGTGGCACAGTGCA+CGG - Chr2:6592390-6592409 MsG0280006808.01.T01:intron 50.0%
TACCGTGCGAGAGAAATGGT+TGG + Chr2:6589064-6589083 None:intergenic 50.0%
TGCCAACCATTTCTCTCGCA+CGG - Chr2:6589059-6589078 MsG0280006808.01.T01:CDS 50.0%
TGCTAGAGCATGCATTGCTG+TGG - Chr2:6593307-6593326 MsG0280006808.01.T01:CDS 50.0%
TGGCTGTGCTATAGGGACTT+TGG - Chr2:6590512-6590531 MsG0280006808.01.T01:CDS 50.0%
TTCTTTAGTGGCACAGCAGG+AGG - Chr2:6592156-6592175 MsG0280006808.01.T01:intron 50.0%
TTTACACTTGCGTGGCCCAT+AGG - Chr2:6592879-6592898 MsG0280006808.01.T01:intron 50.0%
! AGGCAGATGTGGTGCTAAGA+GGG - Chr2:6591796-6591815 MsG0280006808.01.T01:intron 50.0%
! ATTCATTCGCTCTTGGTGGC+TGG - Chr2:6589025-6589044 MsG0280006808.01.T01:CDS 50.0%
! GTGGTGCTAAGAGGGTATAG+TGG - Chr2:6591804-6591823 MsG0280006808.01.T01:intron 50.0%
! TAGTGGGTACAACACGAGGT+GGG - Chr2:6591821-6591840 MsG0280006808.01.T01:intron 50.0%
! TTCATTCGCTCTTGGTGGCT+GGG - Chr2:6589026-6589045 MsG0280006808.01.T01:CDS 50.0%
!! ATAGTGGGTACAACACGAGG+TGG - Chr2:6591820-6591839 MsG0280006808.01.T01:intron 50.0%
!! GGTATAGTGGGTACAACACG+AGG - Chr2:6591817-6591836 MsG0280006808.01.T01:intron 50.0%
!! GTCAGCTAGATTTGCTGACG+TGG + Chr2:6590853-6590872 None:intergenic 50.0%
!!! AAGGTGGGCGTTGAAGGTTT+TGG - Chr2:6589268-6589287 MsG0280006808.01.T01:CDS 50.0%
!!! GGGCGTTGAAGGTTTTGGAA+AGG - Chr2:6589273-6589292 MsG0280006808.01.T01:CDS 50.0%
!!! TTTTGGCCTTGTGGGGTTTC+AGG - Chr2:6590428-6590447 MsG0280006808.01.T01:intron 50.0%
ACGTGCAGTGGCTGTGCTAT+AGG - Chr2:6590504-6590523 MsG0280006808.01.T01:CDS 55.0%
AGCTGACGTCACGTGCCAAT+TGG - Chr2:6590866-6590885 MsG0280006808.01.T01:intron 55.0%
CGAAGAGCCGGATCCATAAG+TGG - Chr2:6591647-6591666 MsG0280006808.01.T01:intron 55.0%
CGTGCAGTGGCTGTGCTATA+GGG - Chr2:6590505-6590524 MsG0280006808.01.T01:CDS 55.0%
GCACTTGGGTGACATTGTGG+TGG + Chr2:6590139-6590158 None:intergenic 55.0%
GTCCTTTCAGGAAGACCCTC+TGG + Chr2:6593266-6593285 None:intergenic 55.0%
TGTCACCGCCTTGTGACACA+GGG + Chr2:6591871-6591890 None:intergenic 55.0%
! CAGGCAGATGTGGTGCTAAG+AGG - Chr2:6591795-6591814 MsG0280006808.01.T01:intron 55.0%
! TCATTCGCTCTTGGTGGCTG+GGG - Chr2:6589027-6589046 MsG0280006808.01.T01:CDS 55.0%
!! CAACACAAGGTGGGCGTTGA+AGG - Chr2:6589262-6589281 MsG0280006808.01.T01:CDS 55.0%
CATGGCCCTGGTGGGATTTC+AGG - Chr2:6592441-6592460 MsG0280006808.01.T01:intron 60.0%
CTGTCACCGCCTTGTGACAC+AGG + Chr2:6591872-6591891 None:intergenic 60.0%
GGACTAGGGATGCACGCACA+TGG - Chr2:6592423-6592442 MsG0280006808.01.T01:intron 60.0%
GGATCCGGCTCTTCGCATTC+AGG + Chr2:6591642-6591661 None:intergenic 60.0%
GTGTCACAAGGCGGTGACAG+TGG - Chr2:6591872-6591891 MsG0280006808.01.T01:intron 60.0%
!! CAACACGAGGTGGGCACTGA+AGG - Chr2:6591830-6591849 MsG0280006808.01.T01:intron 60.0%
!! GAGGTGGGCACTGAAGGTGT+TGG - Chr2:6591836-6591855 MsG0280006808.01.T01:intron 60.0%
ATGCACGCACATGGCCCTGG+TGG - Chr2:6592432-6592451 MsG0280006808.01.T01:intron 65.0%
TGCACGCACATGGCCCTGGT+GGG - Chr2:6592433-6592452 MsG0280006808.01.T01:intron 65.0%
GGGATGCACGCACATGGCCC+TGG - Chr2:6592429-6592448 MsG0280006808.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 6588973 6593406 6588973 ID=MsG0280006808.01;Name=MsG0280006808.01
Chr2 mRNA 6588973 6593406 6588973 ID=MsG0280006808.01.T01;Parent=MsG0280006808.01;Name=MsG0280006808.01.T01;_AED=0.37;_eAED=0.39;_QI=0|0|0|1|0.5|0.8|5|0|228
Chr2 exon 6593299 6593406 6593299 ID=MsG0280006808.01.T01:exon:2767;Parent=MsG0280006808.01.T01
Chr2 exon 6592919 6593149 6592919 ID=MsG0280006808.01.T01:exon:2766;Parent=MsG0280006808.01.T01
Chr2 exon 6590495 6590581 6590495 ID=MsG0280006808.01.T01:exon:2765;Parent=MsG0280006808.01.T01
Chr2 exon 6589232 6589329 6589232 ID=MsG0280006808.01.T01:exon:2764;Parent=MsG0280006808.01.T01
Chr2 exon 6588973 6589135 6588973 ID=MsG0280006808.01.T01:exon:2763;Parent=MsG0280006808.01.T01
Chr2 CDS 6593299 6593406 6593299 ID=MsG0280006808.01.T01:cds;Parent=MsG0280006808.01.T01
Chr2 CDS 6592919 6593149 6592919 ID=MsG0280006808.01.T01:cds;Parent=MsG0280006808.01.T01
Chr2 CDS 6590495 6590581 6590495 ID=MsG0280006808.01.T01:cds;Parent=MsG0280006808.01.T01
Chr2 CDS 6589232 6589329 6589232 ID=MsG0280006808.01.T01:cds;Parent=MsG0280006808.01.T01
Chr2 CDS 6588973 6589135 6588973 ID=MsG0280006808.01.T01:cds;Parent=MsG0280006808.01.T01
Gene Sequence

>MsG0280006808.01.T01

ATGACGACGACAAGGCCAAAGATTTTTCTTTTCGGTGATTCAATCACTGAAGATTCATTCGCTCTTGGTGGCTGGGGTGCTTCTCTTGCCAACCATTTCTCTCGCACGGCTGATGTAGTGCTAAGAGGATACAGTGGTTACAACACAAGGTGGGCGTTGAAGGTTTTGGAAAGGGTTTTTCCTGTGTCAAAGGGTGATGGAACAGAAACTGCTCCTGTTGCTTTGACAGTTTTCTTTGGGGCTAATGATGCTTGTCTTCCTAATAGATGTTCTGGTTTTCAGCATGTTCCTCTTCATGAATACAAGGACAATCTTTGCTCCATTGTCTCCTTCTTCAAGGCAGATGTGGTGCTAAGAGGGTATAGTGGGTACAACACGAGGTGGGCACTGAAGGTGTTGGACAGAGTTTCCCTGTGTCACAAGGCGAAGCGATGGCCGACAAGTAAAGTCATCCTCATAACTCCTCCTCCCATTGATGAAGTTGCACGACTAGGTATTGTTTATTGGCTTTTTATCTTCATTTTATATCCATTTGAGAATAATCCAGAGGGTCTTCCTGAAAGGACTAATGAAGCTGCTGGTGAATATGCTAGAGCATGCATTGCTGTGGCCACTGAATGTCATATCCTTACATTGATCTCTGGACCAAAATGCAACAGTTCCCTGACTGGAAAAAAGTTTATTTAA
Protein sequence

>MsG0280006808.01.T01

MTTTRPKIFLFGDSITEDSFALGGWGASLANHFSRTADVVLRGYSGYNTRWALKVLERVFPVSKGDGTETAPVALTVFFGANDACLPNRCSGFQHVPLHEYKDNLCSIVSFFKADVVLRGYSGYNTRWALKVLDRVSLCHKAKRWPTSKVILITPPPIDEVARLGIVYWLFIFILYPFENNPEGLPERTNEAAGEYARACIAVATECHILTLISGPKCNSSLTGKKFI*