AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031506.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031506.01.T01 MTR_6g024135 66.031 262 31 4 64 322 43 249 1.64e-106 311
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031506.01.T01 AT2G27020 54.647 269 64 4 57 322 36 249 2.59e-91 273
MsG0680031506.01.T01 AT2G27020 50.943 265 72 3 61 322 142 351 1.87e-80 248

Find 67 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGTTTCAGAGGTATTT+TGG 0.204212 6:-21299561 MsG0680031506.01.T01:intron
CATTCGAAAATGATGCTTTC+GGG 0.236906 6:-21302779 MsG0680031506.01.T01:CDS
TAATCTTGCTGCAGACCTTT+TGG 0.265690 6:-21299769 MsG0680031506.01.T01:intron
TACTAAGGATGGAATTGTTT+TGG 0.284845 6:-21302913 MsG0680031506.01.T01:intron
GCAAGTTCCTTGACAGGAAT+TGG 0.290742 6:+21301489 None:intergenic
CCATTCGAAAATGATGCTTT+CGG 0.324288 6:-21302780 MsG0680031506.01.T01:CDS
TTGTACATGGTTGAACCTTC+TGG 0.377461 6:-21301272 MsG0680031506.01.T01:CDS
GAGAAGAAGAATGTTTATTC+CGG 0.381363 6:-21301541 MsG0680031506.01.T01:intron
AACGGCGTGAATTCTTCTAT+TGG 0.385310 6:+21302754 None:intergenic
TGCACCTCTGCACATTATAC+TGG 0.388962 6:-21301446 MsG0680031506.01.T01:CDS
TTGTACATGGTCGAACCTTC+TGG 0.390091 6:-21299703 MsG0680031506.01.T01:CDS
TTGTGCAAATGCAGTATATA+TGG 0.408846 6:-21298277 MsG0680031506.01.T01:intron
TAAATTAGCTCTCGAAGAAA+TGG 0.409396 6:-21297801 MsG0680031506.01.T01:CDS
AGCTAATTTAGCTGCTGTCT+TGG 0.430728 6:+21297814 None:intergenic
TTTGGATGTGGTGTCATACT+AGG 0.432245 6:-21299751 MsG0680031506.01.T01:CDS
GCTTCTTCTAGAAGCTCCTC+TGG 0.439481 6:+21297836 None:intergenic
TTCAATAACACCTTGTCGGC+AGG 0.462897 6:+21298395 None:intergenic
CATGTCACAGGTTCGAATGC+TGG 0.467112 6:-21304359 MsG0680031506.01.T01:CDS
CACGCCGTTCATCGCCACTC+TGG 0.470804 6:-21302740 MsG0680031506.01.T01:CDS
AATCAACTGCTGGCATCGCC+TGG 0.472094 6:-21304418 MsG0680031506.01.T01:CDS
CTACTTCAATAACACCTTGT+CGG 0.474090 6:+21298391 None:intergenic
CAGGTTCGAATGCTGGCAAA+TGG 0.479628 6:-21304352 MsG0680031506.01.T01:CDS
CCTGTCGTAGTTAGTTGCTT+CGG 0.482274 6:+21300494 None:intergenic
CTGGCATCGCCTGGTCTGTA+TGG 0.485288 6:-21304409 MsG0680031506.01.T01:CDS
ACGCTGAAAAGAAACATAAC+CGG 0.485984 6:+21301522 None:intergenic
ATGGAAGGCAAATTGTTGCC+AGG 0.487771 6:-21300524 MsG0680031506.01.T01:CDS
ATCAAACCGTCAACATGAAA+AGG 0.490739 6:-21298194 MsG0680031506.01.T01:intron
TGCAATCGGGAAGGGCAGAC+AGG 0.508389 6:-21299535 MsG0680031506.01.T01:CDS
AGTTGCTTCGGACTTAGCCC+TGG 0.513490 6:+21300506 None:intergenic
GAATGCTGGCAAATGGAGAA+TGG 0.520136 6:-21304345 MsG0680031506.01.T01:CDS
CGATCAGCAAGTTCCTTGAC+AGG 0.521498 6:+21301483 None:intergenic
GGCAACAATTTGCCTTCCAT+CGG 0.522388 6:+21300527 None:intergenic
AACTATGCAGAATCAACTGC+TGG 0.530598 6:-21304428 None:intergenic
CATTCGAACCTGTGACATGC+AGG 0.530751 6:+21304363 None:intergenic
CCGAAGCAACTAACTACGAC+AGG 0.544505 6:-21300494 MsG0680031506.01.T01:intron
GCACATTATACTGGTGGCTA+AGG 0.547696 6:-21301437 MsG0680031506.01.T01:CDS
TGACACGCATGTCGATACTA+AGG 0.549277 6:-21302928 MsG0680031506.01.T01:CDS
CAGGATTAGCTGCCGATGGA+AGG 0.551614 6:-21300539 MsG0680031506.01.T01:CDS
AGTATGACACCACATCCAAA+AGG 0.565132 6:+21299754 None:intergenic
TTTGGTGCTGCAATCGGGAA+GGG 0.566694 6:-21299543 MsG0680031506.01.T01:CDS
TGGAGTTCATGACGAGGCAA+AGG 0.579021 6:-21298257 MsG0680031506.01.T01:CDS
ATTACCTACCTGCATGTCAC+AGG 0.579233 6:-21304371 MsG0680031506.01.T01:CDS
CGTTCATCGCCACTCTGGAA+TGG 0.579273 6:-21302735 MsG0680031506.01.T01:CDS
CATTCCAGAGTGGCGATGAA+CGG 0.580559 6:+21302736 None:intergenic
AGATGGACCACAGTTGTACA+TGG 0.581771 6:-21299716 MsG0680031506.01.T01:CDS
AGATGGACCACAGTTGTACA+TGG 0.581771 6:-21301285 MsG0680031506.01.T01:CDS
TGGTGATCCAATTCCTGTCA+AGG 0.583937 6:-21301496 MsG0680031506.01.T01:CDS
GATTGAAAAGTTGAAGCTTG+CGG 0.589401 6:-21298424 MsG0680031506.01.T01:CDS
TGATTGTGTGCAGGTTCCAG+AGG 0.592525 6:-21297852 MsG0680031506.01.T01:intron
GCGGATATGACCTGCCGACA+AGG 0.596010 6:-21298405 MsG0680031506.01.T01:CDS
TGGAAGGCAAATTGTTGCCA+GGG 0.599815 6:-21300523 MsG0680031506.01.T01:CDS
GTAGCAGGATTAGCTGCCGA+TGG 0.600887 6:-21300543 MsG0680031506.01.T01:CDS
ACCTCTGCACATTATACTGG+TGG 0.622935 6:-21301443 MsG0680031506.01.T01:CDS
ACGCATGTCGATACTAAGGA+TGG 0.627922 6:-21302924 MsG0680031506.01.T01:CDS
CAAGGAACTTGCTGATCGAG+TGG 0.632639 6:-21301478 MsG0680031506.01.T01:CDS
CGAACCTGTGACATGCAGGT+AGG 0.636425 6:+21304367 None:intergenic
CTAGGTGGTTACGACAGAGA+TGG 0.638286 6:-21299733 MsG0680031506.01.T01:CDS
CTAGGTGGTTACGACAGAGA+TGG 0.638286 6:-21301302 MsG0680031506.01.T01:intron
GGATGTGGTGTCATACTAGG+TGG 0.653371 6:-21299748 MsG0680031506.01.T01:CDS
CTCACATATGAGACACCAGA+AGG 0.665421 6:+21301257 None:intergenic
ACACAATTACCATACAGACC+AGG 0.668095 6:+21304400 None:intergenic
GCCACCAGTATAATGTGCAG+AGG 0.669169 6:+21301442 None:intergenic
CTCACATAAGAGACACCAGA+AGG 0.679277 6:+21299688 None:intergenic
GGTTCAACCATGTACAACTG+TGG 0.717390 6:+21301278 None:intergenic
GGTTCGACCATGTACAACTG+TGG 0.719686 6:+21299709 None:intergenic
AACAAAGTACCATTCCAGAG+TGG 0.731365 6:+21302726 None:intergenic
TATATATGGAGTTCATGACG+AGG 0.744573 6:-21298263 MsG0680031506.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTCAAAAACTAAAA+AGG + Chr6:21299365-21299384 None:intergenic 10.0%
!! TTAAAGAAAATGAATTATTA+AGG - Chr6:21298037-21298056 MsG0680031506.01.T01:intron 10.0%
!!! AAAAAAAAAATTTGATAACT+TGG - Chr6:21302014-21302033 MsG0680031506.01.T01:intron 10.0%
!!! ATAATTTTATTTGTTTAACT+CGG - Chr6:21303283-21303302 MsG0680031506.01.T01:intron 10.0%
!! ACCTAAATATTAAACAAATT+AGG + Chr6:21299135-21299154 None:intergenic 15.0%
!! ATAATAGAGATATCATATAT+TGG + Chr6:21298759-21298778 None:intergenic 15.0%
!! CAATAATAAGTAATACAAAA+GGG + Chr6:21300294-21300313 None:intergenic 15.0%
!! TAAATAATAAGATTGTTCAA+GGG + Chr6:21300192-21300211 None:intergenic 15.0%
!! TAATAAGCATATTACATATA+AGG + Chr6:21303037-21303056 None:intergenic 15.0%
!! TCGATAAATATAAAAAATAC+TGG - Chr6:21303366-21303385 MsG0680031506.01.T01:intron 15.0%
!! TTAAATAATAAGATTGTTCA+AGG + Chr6:21300193-21300212 None:intergenic 15.0%
!!! AAACTTAAAACACAATATTT+TGG - Chr6:21303237-21303256 MsG0680031506.01.T01:intron 15.0%
!!! AAGTTTTTAATAAAGTTAGA+TGG - Chr6:21301833-21301852 MsG0680031506.01.T01:intron 15.0%
!!! AGAACATTTCAAATTATTTT+AGG - Chr6:21300227-21300246 MsG0680031506.01.T01:intron 15.0%
!!! AGTTCATATTTTTATGTTTA+TGG - Chr6:21304238-21304257 MsG0680031506.01.T01:intron 15.0%
!!! ATAATGATTTCATTATTTTG+AGG - Chr6:21300634-21300653 MsG0680031506.01.T01:intron 15.0%
!!! TCCTAATTTGTTTAATATTT+AGG - Chr6:21299131-21299150 MsG0680031506.01.T01:intron 15.0%
!!! TTCTTTTAATTACTTGTATA+TGG - Chr6:21304088-21304107 MsG0680031506.01.T01:intron 15.0%
!! AAACACTAAATCAATTGATA+AGG + Chr6:21298383-21298402 None:intergenic 20.0%
!! AAACATAGACAGTAATTAAA+AGG + Chr6:21302776-21302795 None:intergenic 20.0%
!! AAATGTTCCTTAATAATTTG+GGG - Chr6:21299336-21299355 MsG0680031506.01.T01:intron 20.0%
!! AACACATTATTAAAGTGTAT+AGG + Chr6:21298143-21298162 None:intergenic 20.0%
!! AACACTAAATCAATTGATAA+GGG + Chr6:21298382-21298401 None:intergenic 20.0%
!! AAGTATATCACATTTCTTTA+TGG + Chr6:21299591-21299610 None:intergenic 20.0%
!! AATTAAATATAACTCTTCTG+TGG - Chr6:21303681-21303700 MsG0680031506.01.T01:intron 20.0%
!! ATAATGATCTTATTATTCTG+AGG - Chr6:21302201-21302220 MsG0680031506.01.T01:intron 20.0%
!! ATATTATTTACAGAAAGCAA+AGG + Chr6:21302831-21302850 None:intergenic 20.0%
!! ATGTAATATGCTTATTAGAA+TGG - Chr6:21303040-21303059 MsG0680031506.01.T01:intron 20.0%
!! CATTCTATATAATATGTAGT+AGG + Chr6:21301378-21301397 None:intergenic 20.0%
!! GAAATGTTCCTTAATAATTT+GGG - Chr6:21299335-21299354 MsG0680031506.01.T01:intron 20.0%
!! GCAATAATAAGTAATACAAA+AGG + Chr6:21300295-21300314 None:intergenic 20.0%
!! GTTATTATATTATTGTTCAG+TGG - Chr6:21303635-21303654 MsG0680031506.01.T01:intron 20.0%
!! TATTAATAACCGATGTATAA+TGG - Chr6:21300859-21300878 MsG0680031506.01.T01:intron 20.0%
!! TCAGTAAAAAAAAAATCACA+TGG + Chr6:21302619-21302638 None:intergenic 20.0%
!! TGAAATGTTCCTTAATAATT+TGG - Chr6:21299334-21299353 MsG0680031506.01.T01:intron 20.0%
!! TGTAAAACAAAATTCTGATA+TGG + Chr6:21303741-21303760 None:intergenic 20.0%
!! TGTCAACAGTAATATTTAAA+GGG + Chr6:21298668-21298687 None:intergenic 20.0%
!! TTGTCAACAGTAATATTTAA+AGG + Chr6:21298669-21298688 None:intergenic 20.0%
!! TTTAATTACTGTCTATGTTT+GGG - Chr6:21302776-21302795 MsG0680031506.01.T01:CDS 20.0%
!!! ACAAATCTTTTTCCAATTTT+AGG - Chr6:21301646-21301665 MsG0680031506.01.T01:intron 20.0%
!!! ATAATCTTTAGAGTTAAAAG+GGG + Chr6:21300263-21300282 None:intergenic 20.0%
!!! ATTTTTATCACATATTAGTC+AGG + Chr6:21300352-21300371 None:intergenic 20.0%
!!! GATAATCTTTAGAGTTAAAA+GGG + Chr6:21300264-21300283 None:intergenic 20.0%
!!! TAGCTTATATGTTACTTTAA+AGG - Chr6:21302971-21302990 MsG0680031506.01.T01:intron 20.0%
!!! TATTAGAAAAGTATCAACAA+TGG + Chr6:21301525-21301544 None:intergenic 20.0%
!!! TCTAAAATGAACAATAATTG+TGG - Chr6:21302747-21302766 MsG0680031506.01.T01:CDS 20.0%
!!! TTTTAATTACTGTCTATGTT+TGG - Chr6:21302775-21302794 MsG0680031506.01.T01:CDS 20.0%
! AAGAAAGAACGAATTAACTA+AGG - Chr6:21299204-21299223 MsG0680031506.01.T01:intron 25.0%
! AATCTGATAACTTGAAATAG+AGG - Chr6:21300422-21300441 MsG0680031506.01.T01:intron 25.0%
! AATTGTCTTAGTGTTTCATT+TGG - Chr6:21298314-21298333 MsG0680031506.01.T01:intron 25.0%
! AGAAGAATGTTTGTTTATTC+TGG - Chr6:21302242-21302261 MsG0680031506.01.T01:intron 25.0%
! ATAAAAATTCACTGTAGCTA+AGG + Chr6:21302593-21302612 None:intergenic 25.0%
! ATAGAAGAAATGAAGCAAAA+TGG + Chr6:21298585-21298604 None:intergenic 25.0%
! ATGATATCTCTATTATCTCA+TGG - Chr6:21298763-21298782 MsG0680031506.01.T01:intron 25.0%
! CTATTGAGAGAATCAAAATT+AGG + Chr6:21298249-21298268 None:intergenic 25.0%
! GATATGTAATGAAACAAATG+TGG + Chr6:21304133-21304152 None:intergenic 25.0%
! GATTAATAAGAACCATATAG+TGG - Chr6:21300033-21300052 MsG0680031506.01.T01:intron 25.0%
! GGTCATTCTATATAATATGT+AGG + Chr6:21299872-21299891 None:intergenic 25.0%
! GTCAACAGTAATATTTAAAG+GGG + Chr6:21298667-21298686 None:intergenic 25.0%
! TAATAAGTAACAACAAACAC+TGG + Chr6:21303875-21303894 None:intergenic 25.0%
! TAGTTTGGACAAATAACATT+TGG + Chr6:21300378-21300397 None:intergenic 25.0%
! TATCATATAGTATCATTGTC+TGG + Chr6:21298716-21298735 None:intergenic 25.0%
! TATGTTAAAACGGAGAAAAA+CGG - Chr6:21298923-21298942 MsG0680031506.01.T01:intron 25.0%
! TGATATCTCTATTATCTCAT+GGG - Chr6:21298764-21298783 MsG0680031506.01.T01:intron 25.0%
! TGGGAAAAATACTGATAATT+TGG + Chr6:21300066-21300085 None:intergenic 25.0%
!! AATTTGATAACTTGGAATAG+AGG - Chr6:21302022-21302041 MsG0680031506.01.T01:intron 25.0%
!! ACCAAATTTTAAACGATTCA+CGG - Chr6:21299889-21299908 MsG0680031506.01.T01:intron 25.0%
!! AGAACGTGTGAAATTATTTT+AGG - Chr6:21301881-21301900 MsG0680031506.01.T01:intron 25.0%
!! ATATTTCTTTTCAGTGTGTA+TGG - Chr6:21302267-21302286 MsG0680031506.01.T01:intron 25.0%
!! GTTGTGAATCGTTTAAAATT+TGG + Chr6:21301402-21301421 None:intergenic 25.0%
!! TCTTGTTGACTATGTTAAAA+CGG - Chr6:21298913-21298932 MsG0680031506.01.T01:intron 25.0%
!! TTGCATAGAATTGTAGTTTT+TGG - Chr6:21304298-21304317 MsG0680031506.01.T01:intron 25.0%
!!! ATAAAGTTAGATGGACTAAT+AGG - Chr6:21301842-21301861 MsG0680031506.01.T01:intron 25.0%
!!! ATTTGAGTTACTTTTATGCA+AGG - Chr6:21304057-21304076 MsG0680031506.01.T01:intron 25.0%
!!! CTTTTGTTTCAAAGGTATTT+TGG - Chr6:21301089-21301108 MsG0680031506.01.T01:intron 25.0%
!!! GGATAATCTTTAGAGTTAAA+AGG + Chr6:21300265-21300284 None:intergenic 25.0%
!!! TGCAATTTTCGTTGATTTTA+GGG - Chr6:21299396-21299415 MsG0680031506.01.T01:intron 25.0%
!!! TTCATCTGTTTGATTTGTAT+TGG - Chr6:21304170-21304189 MsG0680031506.01.T01:intron 25.0%
!!! TTGTACTGATTTGTTTGTAT+GGG - Chr6:21301066-21301085 MsG0680031506.01.T01:intron 25.0%
!!! TTTGTACTGATTTGTTTGTA+TGG - Chr6:21301065-21301084 MsG0680031506.01.T01:intron 25.0%
AAGGAAACCCCAAATTATTA+AGG + Chr6:21299346-21299365 None:intergenic 30.0%
AAGTAATAGTTGCAAGCAAA+TGG + Chr6:21301752-21301771 None:intergenic 30.0%
AGAAAAAATTACTGTAGCTC+AGG + Chr6:21301024-21301043 None:intergenic 30.0%
AGGAATACATCAGTAAACAA+TGG + Chr6:21300086-21300105 None:intergenic 30.0%
AGTAATACAAAAGGGAAACT+AGG + Chr6:21300286-21300305 None:intergenic 30.0%
ATAACTTGAAATAGAGGTGA+AGG - Chr6:21300428-21300447 MsG0680031506.01.T01:intron 30.0%
ATAATAAGATTGTTCAAGGG+TGG + Chr6:21300189-21300208 None:intergenic 30.0%
ATGAACTTGATCACTTTATG+CGG + Chr6:21298166-21298185 None:intergenic 30.0%
GAGAAGAAGAATGTTTATTC+CGG - Chr6:21300673-21300692 MsG0680031506.01.T01:intron 30.0%
GATGATTGTTCTCATATATG+AGG - Chr6:21297931-21297950 MsG0680031506.01.T01:intron 30.0%
GGAATACATCAGTAAACAAT+GGG + Chr6:21300085-21300104 None:intergenic 30.0%
GGTTTCTTGAAACTTGAAAT+AGG - Chr6:21300449-21300468 MsG0680031506.01.T01:intron 30.0%
GTCAACAAGAATTACAGAAA+CGG + Chr6:21298903-21298922 None:intergenic 30.0%
GTCAATAATCACAATTGCTT+TGG + Chr6:21298527-21298546 None:intergenic 30.0%
TAAGAGTGAAAGATTGTGAA+GGG - Chr6:21301175-21301194 MsG0680031506.01.T01:intron 30.0%
TCAAACAGATGAAACAAATG+TGG + Chr6:21304163-21304182 None:intergenic 30.0%
TTGTGCAAATGCAGTATATA+TGG - Chr6:21303937-21303956 MsG0680031506.01.T01:intron 30.0%
! CAAATAACTACTTTGAGTTC+CGG - Chr6:21302889-21302908 MsG0680031506.01.T01:intron 30.0%
! GAACCAGTTTTCAATTAAGA+TGG + Chr6:21298341-21298360 None:intergenic 30.0%
! TAAATTAGCTCTCGAAGAAA+TGG - Chr6:21304413-21304432 MsG0680031506.01.T01:CDS 30.0%
! TACTAAGGATGGAATTGTTT+TGG - Chr6:21299301-21299320 MsG0680031506.01.T01:intron 30.0%
! TCTATCACTGAATGATCTTT+TGG - Chr6:21299721-21299740 MsG0680031506.01.T01:CDS 30.0%
! TCTATGGATTAATAAGCGTA+AGG - Chr6:21299925-21299944 MsG0680031506.01.T01:intron 30.0%
! TTATTTGATGCTTGATAGCA+TGG + Chr6:21302876-21302895 None:intergenic 30.0%
! TTGGATCTTAGTAGTTCTAT+GGG - Chr6:21301317-21301336 MsG0680031506.01.T01:intron 30.0%
! TTTAATTGCTAGTGTTGAAG+TGG - Chr6:21299621-21299640 MsG0680031506.01.T01:intron 30.0%
! TTTGGTTACTTTCCACTATA+TGG + Chr6:21300048-21300067 None:intergenic 30.0%
!! AGAAAAGTATCAACAATGGA+AGG + Chr6:21301521-21301540 None:intergenic 30.0%
!! CAAAATACCTCTGAAACAAA+TGG + Chr6:21302655-21302674 None:intergenic 30.0%
!! GGTAATAAGTGTTGAACAAA+GGG - Chr6:21303387-21303406 MsG0680031506.01.T01:intron 30.0%
!! TGGTAATAAGTGTTGAACAA+AGG - Chr6:21303386-21303405 MsG0680031506.01.T01:intron 30.0%
!!! ACGCATGGTTTTATATATAC+AGG + Chr6:21299000-21299019 None:intergenic 30.0%
!!! CATTTGTTTCAGAGGTATTT+TGG - Chr6:21302653-21302672 MsG0680031506.01.T01:intron 30.0%
!!! GTGCAATTTTCGTTGATTTT+AGG - Chr6:21299395-21299414 MsG0680031506.01.T01:intron 30.0%
AAAACGGAGAAAAACGGTAA+CGG - Chr6:21298929-21298948 MsG0680031506.01.T01:intron 35.0%
AAACGCTGTTAGAGTGAATA+AGG + Chr6:21298872-21298891 None:intergenic 35.0%
AAACTAAGATGACGTGTTAG+AGG - Chr6:21300392-21300411 MsG0680031506.01.T01:intron 35.0%
AAACTTGAATGCATTTCGAC+AGG + Chr6:21304278-21304297 None:intergenic 35.0%
AACTTGAATGCATTTCGACA+GGG + Chr6:21304277-21304296 None:intergenic 35.0%
AAGAGTGAAAGATTGTGAAG+GGG - Chr6:21301176-21301195 MsG0680031506.01.T01:intron 35.0%
AAGTAGCATTTAGTAGAAGC+AGG - Chr6:21299746-21299765 MsG0680031506.01.T01:CDS 35.0%
ACGCTGAAAAGAAACATAAC+CGG + Chr6:21300695-21300714 None:intergenic 35.0%
ACTACTGCCCAAAAAAATGA+TGG + Chr6:21303311-21303330 None:intergenic 35.0%
AGTACAGTAAAGCAAAAGAG+AGG + Chr6:21297969-21297988 None:intergenic 35.0%
AGTAGCATTAAGTAGAAGCA+GGG - Chr6:21301255-21301274 MsG0680031506.01.T01:intron 35.0%
AGTAGCATTTAGTAGAAGCA+GGG - Chr6:21299747-21299766 MsG0680031506.01.T01:CDS 35.0%
ATAACTTGGAATAGAGGTGA+AGG - Chr6:21302028-21302047 MsG0680031506.01.T01:intron 35.0%
ATAATGTTGCCATAATGGCA+TGG + Chr6:21298431-21298450 None:intergenic 35.0%
ATCAAACCGTCAACATGAAA+AGG - Chr6:21304020-21304039 MsG0680031506.01.T01:intron 35.0%
ATCTTGTGAATGTCTTTGCA+GGG - Chr6:21303766-21303785 MsG0680031506.01.T01:intron 35.0%
ATTAATTTCCTAGTCCACCA+TGG + Chr6:21298478-21298497 None:intergenic 35.0%
CAAAAACGACAGCAACATTA+AGG + Chr6:21298967-21298986 None:intergenic 35.0%
CAAAACATATAAACACACGC+TGG + Chr6:21299794-21299813 None:intergenic 35.0%
CAGGACACAATTAAAAGTCT+AGG + Chr6:21301005-21301024 None:intergenic 35.0%
CATTCGAAAATGATGCTTTC+GGG - Chr6:21299435-21299454 MsG0680031506.01.T01:intron 35.0%
CCATTCGAAAATGATGCTTT+CGG - Chr6:21299434-21299453 MsG0680031506.01.T01:intron 35.0%
CGGTTATAATGTTGCCATAA+TGG + Chr6:21298436-21298455 None:intergenic 35.0%
CTAAGAGTGAAAGATTGTGA+AGG - Chr6:21301174-21301193 MsG0680031506.01.T01:intron 35.0%
CTAATCCCATAGAACTACTA+AGG + Chr6:21299819-21299838 None:intergenic 35.0%
CTACTGCCCAAAAAAATGAT+GGG + Chr6:21303310-21303329 None:intergenic 35.0%
CTACTTCAATAACACCTTGT+CGG + Chr6:21303826-21303845 None:intergenic 35.0%
GACTAATAGGAACCATATAG+TGG - Chr6:21301855-21301874 MsG0680031506.01.T01:intron 35.0%
GAGAGATTAAGAAAAACTGC+AGG - Chr6:21303430-21303449 MsG0680031506.01.T01:intron 35.0%
GATTGAAAAGTTGAAGCTTG+CGG - Chr6:21303790-21303809 MsG0680031506.01.T01:intron 35.0%
GGTCCATCTTAATTGAAAAC+TGG - Chr6:21298335-21298354 MsG0680031506.01.T01:intron 35.0%
GTATTCCTCGAGGAAAAAAA+CGG - Chr6:21300098-21300117 MsG0680031506.01.T01:intron 35.0%
GTCTAAGTGAAAGATTGTGA+AGG - Chr6:21299658-21299677 MsG0680031506.01.T01:intron 35.0%
TAAGCCATGACAAGAAACTA+TGG - Chr6:21303501-21303520 MsG0680031506.01.T01:intron 35.0%
TACACCATCTGTGATTGAAT+TGG - Chr6:21301799-21301818 MsG0680031506.01.T01:intron 35.0%
TACTGCCCAAAAAAATGATG+GGG + Chr6:21303309-21303328 None:intergenic 35.0%
TAGGTATTCTGACGTTACTT+AGG - Chr6:21299150-21299169 MsG0680031506.01.T01:intron 35.0%
TATATATGGAGTTCATGACG+AGG - Chr6:21303951-21303970 MsG0680031506.01.T01:intron 35.0%
TATCTTGTGAATGTCTTTGC+AGG - Chr6:21303765-21303784 MsG0680031506.01.T01:intron 35.0%
TCTAACACGTCATCATAGTT+TGG + Chr6:21301958-21301977 None:intergenic 35.0%
TCTAACACGTCATCTTAGTT+TGG + Chr6:21300393-21300412 None:intergenic 35.0%
TCTTGTTACTGTCTTTCGTT+TGG - Chr6:21299531-21299550 MsG0680031506.01.T01:CDS 35.0%
TGTTCTATCCTAACACATGT+CGG - Chr6:21302397-21302416 MsG0680031506.01.T01:intron 35.0%
TTTGTGATGAAAGATGTGTC+CGG + Chr6:21299065-21299084 None:intergenic 35.0%
! AAACACTGCTTGATGATTGA+TGG - Chr6:21302114-21302133 MsG0680031506.01.T01:intron 35.0%
! AAACTATGATGACGTGTTAG+AGG - Chr6:21301957-21301976 MsG0680031506.01.T01:intron 35.0%
! ACACGTTCTTTTCCACTATA+TGG + Chr6:21301870-21301889 None:intergenic 35.0%
! ACTTGAAAGCATATGATCCA+TGG - Chr6:21298458-21298477 MsG0680031506.01.T01:intron 35.0%
! AGTTCTATGGGATTAGCATA+AGG - Chr6:21301329-21301348 MsG0680031506.01.T01:intron 35.0%
! ATGTTTCTTTTCAGCGTGTA+TGG - Chr6:21300698-21300717 MsG0680031506.01.T01:intron 35.0%
! ATTTTGAACTCGAAATGAGC+TGG - Chr6:21303986-21304005 MsG0680031506.01.T01:intron 35.0%
! CAGCGTGTGTTTATATGTTT+TGG - Chr6:21299792-21299811 MsG0680031506.01.T01:intron 35.0%
! CTTGGATCTTAGTAGTTCTA+TGG - Chr6:21301316-21301335 MsG0680031506.01.T01:intron 35.0%
! GATCATATGCTTTCAAGTGA+CGG + Chr6:21298456-21298475 None:intergenic 35.0%
! GCCGTGAATCGTTTAAAATT+TGG + Chr6:21299893-21299912 None:intergenic 35.0%
! TACTTTGTTGTCTCTTGCTT+TGG + Chr6:21300533-21300552 None:intergenic 35.0%
! TGTATTGCCATTTGTTTCAG+AGG - Chr6:21302645-21302664 MsG0680031506.01.T01:intron 35.0%
! TTGGACCTTAGTAGTTCTAT+GGG - Chr6:21299811-21299830 MsG0680031506.01.T01:intron 35.0%
! TTTGGACCTTAGTAGTTCTA+TGG - Chr6:21299810-21299829 MsG0680031506.01.T01:intron 35.0%
! TTTTGAACTCGAAATGAGCT+GGG - Chr6:21303987-21304006 MsG0680031506.01.T01:intron 35.0%
!! AATAAGTGTTGAACAAAGGG+AGG - Chr6:21303390-21303409 MsG0680031506.01.T01:intron 35.0%
!! ATAAGTGTTGAACAAAGGGA+GGG - Chr6:21303391-21303410 MsG0680031506.01.T01:intron 35.0%
!! CAACATTAAGGTTTAGGTTG+TGG + Chr6:21298955-21298974 None:intergenic 35.0%
!! GAGTTGATTTGGACTATCTT+TGG - Chr6:21303475-21303494 MsG0680031506.01.T01:intron 35.0%
!! TCACACCACTTATGTTTTTG+CGG + Chr6:21301141-21301160 None:intergenic 35.0%
!! TGTATGGGCTTTTGTTTCAA+AGG - Chr6:21301081-21301100 MsG0680031506.01.T01:intron 35.0%
!!! CATTTTTTTGGGCAGTAGTA+TGG - Chr6:21303312-21303331 MsG0680031506.01.T01:intron 35.0%
!!! TAATGTTGCTGTCGTTTTTG+CGG - Chr6:21298967-21298986 MsG0680031506.01.T01:intron 35.0%
AACGGCGTGAATTCTTCTAT+TGG + Chr6:21299463-21299482 None:intergenic 40.0%
AAGCAATGTCACGTACACAA+TGG + Chr6:21298642-21298661 None:intergenic 40.0%
AATCGTAACACACTGCTTGA+TGG - Chr6:21300507-21300526 MsG0680031506.01.T01:CDS 40.0%
ACACAATTACCATACAGACC+AGG + Chr6:21297817-21297836 None:intergenic 40.0%
ACCGTCAACATGAAAAGGTA+AGG - Chr6:21304025-21304044 MsG0680031506.01.T01:intron 40.0%
ACCTCTGCACATTATAATGG+TGG - Chr6:21302340-21302359 MsG0680031506.01.T01:intron 40.0%
ACTTCAAAAGAAGAGCCTCA+AGG + Chr6:21303166-21303185 None:intergenic 40.0%
AGCTAATTTAGCTGCTGTCT+TGG + Chr6:21304403-21304422 None:intergenic 40.0%
AGTATGACACCACATCCAAA+AGG + Chr6:21300894-21300913 None:intergenic 40.0%
ATCCTGCTACAGCCTAAAAT+TGG + Chr6:21301661-21301680 None:intergenic 40.0%
ATTTGACAATCAGCTGCTGA+AGG - Chr6:21302936-21302955 MsG0680031506.01.T01:CDS 40.0%
CAACATGAAAAGGTAAGGCA+GGG - Chr6:21304030-21304049 MsG0680031506.01.T01:intron 40.0%
CAGGGAATAACAATCGTGTT+TGG + Chr6:21300317-21300336 None:intergenic 40.0%
CAGTAGCATTAAGTAGAAGC+AGG - Chr6:21301254-21301273 MsG0680031506.01.T01:intron 40.0%
CGACAGCAACATTAAGGTTT+AGG + Chr6:21298961-21298980 None:intergenic 40.0%
CTACGAAATTGATTGTGTGC+AGG - Chr6:21304353-21304372 MsG0680031506.01.T01:CDS 40.0%
GCATCCAATTCAATCACAGA+TGG + Chr6:21301806-21301825 None:intergenic 40.0%
GGAAAAAAACGGTAGTAGCT+AGG - Chr6:21300109-21300128 MsG0680031506.01.T01:intron 40.0%
GGAGGGTAGTTCAATAAGTA+GGG - Chr6:21303408-21303427 MsG0680031506.01.T01:intron 40.0%
GGGCAGTAGTATGGTATAAA+TGG - Chr6:21303321-21303340 MsG0680031506.01.T01:intron 40.0%
GTTTACTGATGTATTCCTCG+AGG - Chr6:21300088-21300107 MsG0680031506.01.T01:intron 40.0%
TAAGTAGAAGCAGGGTTCTA+AGG - Chr6:21301263-21301282 MsG0680031506.01.T01:CDS 40.0%
TCAACATGAAAAGGTAAGGC+AGG - Chr6:21304029-21304048 MsG0680031506.01.T01:intron 40.0%
TCCAAGACAAATAAACACGC+AGG + Chr6:21301302-21301321 None:intergenic 40.0%
TCCTGCGTGTTTATTTGTCT+TGG - Chr6:21301298-21301317 MsG0680031506.01.T01:CDS 40.0%
TCGTTCAAGGCAATGATACA+AGG + Chr6:21298562-21298581 None:intergenic 40.0%
TCTCTATTATCTCATGGGAC+TGG - Chr6:21298769-21298788 MsG0680031506.01.T01:intron 40.0%
TCTGCAGCACCATTATACAT+CGG + Chr6:21300871-21300890 None:intergenic 40.0%
TGAAGCAAAATGGTCGTTCA+AGG + Chr6:21298575-21298594 None:intergenic 40.0%
TGCACCTCTGCACATTATAA+TGG - Chr6:21302337-21302356 MsG0680031506.01.T01:intron 40.0%
TTAAGTTCTTGTGTGCACCT+GGG - Chr6:21301459-21301478 MsG0680031506.01.T01:CDS 40.0%
TTAGTAGAAGCAGGGTTCTA+AGG - Chr6:21299755-21299774 MsG0680031506.01.T01:CDS 40.0%
TTGTACATGGTTGAACCTTC+TGG - Chr6:21300942-21300961 MsG0680031506.01.T01:intron 40.0%
TTGTGATGAAAGATGTGTCC+GGG + Chr6:21299064-21299083 None:intergenic 40.0%
! AACAAAGTACCATTCCAGAG+TGG + Chr6:21299491-21299510 None:intergenic 40.0%
! ACTTTGAGTTCCGGTTACAT+GGG - Chr6:21302898-21302917 MsG0680031506.01.T01:intron 40.0%
! AGCGAGATTGAGAGTTGATT+TGG - Chr6:21303464-21303483 MsG0680031506.01.T01:intron 40.0%
! AGTTCTATGGGATTAGCGTA+AGG - Chr6:21299823-21299842 MsG0680031506.01.T01:intron 40.0%
! CAATTGAACCTTTTCTCGCT+AGG + Chr6:21303562-21303581 None:intergenic 40.0%
! CGATTGTTATTCCCTGCTAA+AGG - Chr6:21300321-21300340 MsG0680031506.01.T01:intron 40.0%
! GCCTTACCTTTTCATGTTGA+CGG + Chr6:21304029-21304048 None:intergenic 40.0%
! TAATCTTGCTGCAGACCTTT+TGG - Chr6:21302445-21302464 MsG0680031506.01.T01:intron 40.0%
! TACTTTGAGTTCCGGTTACA+TGG - Chr6:21302897-21302916 MsG0680031506.01.T01:intron 40.0%
! TATTATCTCATGGGACTGGT+TGG - Chr6:21298773-21298792 MsG0680031506.01.T01:intron 40.0%
! TGAAAGCATATGATCCATGG+TGG - Chr6:21298461-21298480 MsG0680031506.01.T01:intron 40.0%
! TGAAGTATCCGACATGTGTT+AGG + Chr6:21302408-21302427 None:intergenic 40.0%
! TTCCAATTTTAGGCTGTAGC+AGG - Chr6:21301656-21301675 MsG0680031506.01.T01:intron 40.0%
!! TGGTTAGAGTCGGGTTTTAA+CGG - Chr6:21298793-21298812 MsG0680031506.01.T01:intron 40.0%
!! TTTGGATGTGGTGTCATACT+AGG - Chr6:21300894-21300913 MsG0680031506.01.T01:intron 40.0%
!!! AAGCAGGGTTCTAAGGTTTT+TGG - Chr6:21299762-21299781 MsG0680031506.01.T01:intron 40.0%
!!! AGGTATTTTGGTGCTGCAAT+CGG - Chr6:21301101-21301120 MsG0680031506.01.T01:intron 40.0%
!!! CCGAAAGCATCATTTTCGAA+TGG + Chr6:21299437-21299456 None:intergenic 40.0%
!!! TACTACCGTTTTTTTCCTCG+AGG + Chr6:21300106-21300125 None:intergenic 40.0%
AACAGAGATCCCCATGTAAC+CGG + Chr6:21302911-21302930 None:intergenic 45.0%
ACCTCTGCACATTATACTGG+TGG - Chr6:21300771-21300790 MsG0680031506.01.T01:intron 45.0%
ACGCATGTCGATACTAAGGA+TGG - Chr6:21299290-21299309 MsG0680031506.01.T01:intron 45.0%
AGAAGGCTGAATCAACACAC+AGG + Chr6:21300164-21300183 None:intergenic 45.0%
AGATGGACCACAGTTGTACA+TGG - Chr6:21300929-21300948 MsG0680031506.01.T01:intron 45.0%
AGTCATGTCAAGCCTTTAGC+AGG + Chr6:21300336-21300355 None:intergenic 45.0%
ATGCATTTCGACAGGGATTG+TGG + Chr6:21304270-21304289 None:intergenic 45.0%
ATGGAAGGCAAATTGTTGCC+AGG - Chr6:21301690-21301709 MsG0680031506.01.T01:intron 45.0%
ATTACCTACCTGCATGTCAC+AGG - Chr6:21297843-21297862 MsG0680031506.01.T01:intron 45.0%
CAAGAAACTATGGCGTCGTT+TGG - Chr6:21303511-21303530 MsG0680031506.01.T01:intron 45.0%
CACAAACGTCAGTGCTACAT+AGG - Chr6:21299079-21299098 MsG0680031506.01.T01:intron 45.0%
CCTGTCGTAGTTAGTTGCTT+CGG + Chr6:21301723-21301742 None:intergenic 45.0%
CTATGGCGTCGTTTGGTAAA+TGG - Chr6:21303518-21303537 MsG0680031506.01.T01:intron 45.0%
CTCACATAAGAGACACCAGA+AGG + Chr6:21302529-21302548 None:intergenic 45.0%
CTCACATATGAGACACCAGA+AGG + Chr6:21300960-21300979 None:intergenic 45.0%
GAAGGCTGAATCAACACACA+GGG + Chr6:21300163-21300182 None:intergenic 45.0%
GAATGCTGGCAAATGGAGAA+TGG - Chr6:21297869-21297888 MsG0680031506.01.T01:intron 45.0%
GACGCCATAGTTTCTTGTCA+TGG + Chr6:21303508-21303527 None:intergenic 45.0%
GCAAGTTCCTTGACAGGAAT+TGG + Chr6:21300728-21300747 None:intergenic 45.0%
GCACATTATAATGGTGGCTC+AGG - Chr6:21302346-21302365 MsG0680031506.01.T01:intron 45.0%
GCACATTATACTGGTGGCTA+AGG - Chr6:21300777-21300796 MsG0680031506.01.T01:intron 45.0%
GCCACCATTATAATGTGCAG+AGG + Chr6:21302344-21302363 None:intergenic 45.0%
GGCAACAATTTGCCTTCCAT+CGG + Chr6:21301690-21301709 None:intergenic 45.0%
GGGAGGGTAGTTCAATAAGT+AGG - Chr6:21303407-21303426 MsG0680031506.01.T01:intron 45.0%
GGTTCAACCATGTACAACTG+TGG + Chr6:21300939-21300958 None:intergenic 45.0%
GTACCCTCCCTAAAACACAA+CGG + Chr6:21303217-21303236 None:intergenic 45.0%
GTCATGTCAAGCCTTTAGCA+GGG + Chr6:21300335-21300354 None:intergenic 45.0%
GTTAAGTTCTTGTGTGCACC+TGG - Chr6:21301458-21301477 MsG0680031506.01.T01:CDS 45.0%
TAAGTTCTTGTGTGCACCTG+GGG - Chr6:21301460-21301479 MsG0680031506.01.T01:CDS 45.0%
TCCACTTGTCCATGCCATTA+TGG - Chr6:21298419-21298438 MsG0680031506.01.T01:CDS 45.0%
TGACACGCATGTCGATACTA+AGG - Chr6:21299286-21299305 MsG0680031506.01.T01:intron 45.0%
TGATCCTACCTAGCGAGAAA+AGG - Chr6:21303551-21303570 MsG0680031506.01.T01:intron 45.0%
TGCACCTCTGCACATTATAC+TGG - Chr6:21300768-21300787 MsG0680031506.01.T01:intron 45.0%
TGGAAGGCAAATTGTTGCCA+GGG - Chr6:21301691-21301710 MsG0680031506.01.T01:intron 45.0%
TGGTGATCCAATTCCTGTCA+AGG - Chr6:21300718-21300737 MsG0680031506.01.T01:intron 45.0%
TTCAATAACACCTTGTCGGC+AGG + Chr6:21303822-21303841 None:intergenic 45.0%
TTGTACATGGTCGAACCTTC+TGG - Chr6:21302511-21302530 MsG0680031506.01.T01:intron 45.0%
TTTGACGTATGTGCCTGTGT+TGG + Chr6:21299258-21299277 None:intergenic 45.0%
! AAACTACGAAGCACCAACAC+AGG - Chr6:21299242-21299261 MsG0680031506.01.T01:intron 45.0%
! AACATGGACTGTACCAGAGA+AGG + Chr6:21303092-21303111 None:intergenic 45.0%
! ACATGGACTGTACCAGAGAA+GGG + Chr6:21303091-21303110 None:intergenic 45.0%
! CTATGATGACGTGTTAGAGG+TGG - Chr6:21301960-21301979 MsG0680031506.01.T01:intron 45.0%
! CTTTGAGTTCCGGTTACATG+GGG - Chr6:21302899-21302918 MsG0680031506.01.T01:intron 45.0%
! TAGGTTGAGGCATGAGCAAA+GGG + Chr6:21303127-21303146 None:intergenic 45.0%
! TGAACCTTTTCTCGCTAGGT+AGG + Chr6:21303558-21303577 None:intergenic 45.0%
! TGAAGTGTCTGACACGTGTT+AGG + Chr6:21300839-21300858 None:intergenic 45.0%
!! CATATGATCCATGGTGGACT+AGG - Chr6:21298467-21298486 MsG0680031506.01.T01:intron 45.0%
!! TGCAAGTTTTGTCCCGTATG+AGG - Chr6:21303185-21303204 MsG0680031506.01.T01:intron 45.0%
!! TGTGTGTTGATTCAGCCTTC+TGG - Chr6:21300163-21300182 MsG0680031506.01.T01:intron 45.0%
!!! ACTCGGCCCCATCATTTTTT+TGG - Chr6:21303300-21303319 MsG0680031506.01.T01:intron 45.0%
!!! CTCGGCCCCATCATTTTTTT+GGG - Chr6:21303301-21303320 MsG0680031506.01.T01:intron 45.0%
!!! GGTATTTTGGTGCTGCAATC+GGG - Chr6:21301102-21301121 MsG0680031506.01.T01:intron 45.0%
!!! TAATGGTGCTGCAGACCTTT+TGG - Chr6:21300876-21300895 MsG0680031506.01.T01:intron 45.0%
!!! TGCTGTCGTTTTTGCGGAAA+CGG - Chr6:21298973-21298992 MsG0680031506.01.T01:intron 45.0%
ACAGGCTGCGAAAACGTAAG+TGG - Chr6:21302697-21302716 MsG0680031506.01.T01:CDS 50.0%
AGGGGGGGTAGAAGAAAACA+TGG + Chr6:21303108-21303127 None:intergenic 50.0%
AGGTTGAGGCATGAGCAAAG+GGG + Chr6:21303126-21303145 None:intergenic 50.0%
AGGTTTCAAAGCGCACAGGT+AGG + Chr6:21303146-21303165 None:intergenic 50.0%
ATTGTTCAAGGGTGGCCAGA+AGG + Chr6:21300181-21300200 None:intergenic 50.0%
CAGGTTCGAATGCTGGCAAA+TGG - Chr6:21297862-21297881 MsG0680031506.01.T01:intron 50.0%
CATGTCACAGGTTCGAATGC+TGG - Chr6:21297855-21297874 MsG0680031506.01.T01:intron 50.0%
CATTCCAGAGTGGCGATGAA+CGG + Chr6:21299481-21299500 None:intergenic 50.0%
CATTCGAACCTGTGACATGC+AGG + Chr6:21297854-21297873 None:intergenic 50.0%
CCGAAGCAACTAACTACGAC+AGG - Chr6:21301720-21301739 MsG0680031506.01.T01:intron 50.0%
CGATACGATACTGACACGCA+TGG + Chr6:21299015-21299034 None:intergenic 50.0%
CGATCAGCAAGTTCCTTGAC+AGG + Chr6:21300734-21300753 None:intergenic 50.0%
CTAGGTGGTTACGACAGAGA+TGG - Chr6:21300912-21300931 MsG0680031506.01.T01:intron 50.0%
CTCAAGGTTTCAAAGCGCAC+AGG + Chr6:21303150-21303169 None:intergenic 50.0%
GCAGGCCGCAAAAACATAAG+TGG - Chr6:21301133-21301152 MsG0680031506.01.T01:intron 50.0%
GCCACCAGTATAATGTGCAG+AGG + Chr6:21300775-21300794 None:intergenic 50.0%
GCCATAATGGCATGGACAAG+TGG + Chr6:21298423-21298442 None:intergenic 50.0%
GGTTCGACCATGTACAACTG+TGG + Chr6:21302508-21302527 None:intergenic 50.0%
TGATTGTGTGCAGGTTCCAG+AGG - Chr6:21304362-21304381 MsG0680031506.01.T01:CDS 50.0%
TGGAGTTCATGACGAGGCAA+AGG - Chr6:21303957-21303976 MsG0680031506.01.T01:intron 50.0%
TGTTGCACATTGACACGCGT+CGG - Chr6:21299036-21299055 MsG0680031506.01.T01:intron 50.0%
! GCTTCTTCTAGAAGCTCCTC+TGG + Chr6:21304381-21304400 None:intergenic 50.0%
! GTAGGTTGAGGCATGAGCAA+AGG + Chr6:21303128-21303147 None:intergenic 50.0%
! TGCTGCAGACCTTTTGGATG+TGG - Chr6:21300882-21300901 MsG0680031506.01.T01:intron 50.0%
!! AGTTTTGTCCCGTATGAGGC+TGG - Chr6:21303189-21303208 MsG0680031506.01.T01:intron 50.0%
!! CAAGGAACTTGCTGATCGAG+TGG - Chr6:21300736-21300755 MsG0680031506.01.T01:intron 50.0%
!! CTGTGCGCTTTGAAACCTTG+AGG - Chr6:21303148-21303167 MsG0680031506.01.T01:intron 50.0%
!! GGATGTGGTGTCATACTAGG+TGG - Chr6:21300897-21300916 MsG0680031506.01.T01:intron 50.0%
!! TGGGACTGGTTGGTTAGAGT+CGG - Chr6:21298783-21298802 MsG0680031506.01.T01:intron 50.0%
!! TTTGGTGCTGCAATCGGGAA+GGG - Chr6:21301107-21301126 MsG0680031506.01.T01:intron 50.0%
!!! GCTGGTGCCGTTGTGTTTTA+GGG - Chr6:21303207-21303226 MsG0680031506.01.T01:intron 50.0%
!!! GTGCCGTTGTGTTTTAGGGA+GGG - Chr6:21303211-21303230 MsG0680031506.01.T01:intron 50.0%
!!! TTTTGGTGCTGCAATCGGGA+AGG - Chr6:21301106-21301125 MsG0680031506.01.T01:intron 50.0%
AATCAACTGCTGGCATCGCC+TGG - Chr6:21297796-21297815 MsG0680031506.01.T01:CDS 55.0%
ACAACGGCACCAGCCTCATA+CGG + Chr6:21303201-21303220 None:intergenic 55.0%
ACTGTACCAGAGAAGGGCTG+AGG + Chr6:21303085-21303104 None:intergenic 55.0%
AGTTGCTTCGGACTTAGCCC+TGG + Chr6:21301711-21301730 None:intergenic 55.0%
CAAAGCGCACAGGTAGGTTG+AGG + Chr6:21303140-21303159 None:intergenic 55.0%
CGAACCTGTGACATGCAGGT+AGG + Chr6:21297850-21297869 None:intergenic 55.0%
CGGCTGTGCTCTTTGCTCTA+TGG - Chr6:21299909-21299928 MsG0680031506.01.T01:intron 55.0%
GGTTGAGGCATGAGCAAAGG+GGG + Chr6:21303125-21303144 None:intergenic 55.0%
GTTGAGGCATGAGCAAAGGG+GGG + Chr6:21303124-21303143 None:intergenic 55.0%
TGTGTTCCTCAGCCCTTCTC+TGG - Chr6:21303076-21303095 MsG0680031506.01.T01:intron 55.0%
TTGAGGCATGAGCAAAGGGG+GGG + Chr6:21303123-21303142 None:intergenic 55.0%
! CGTTCATCGCCACTCTGGAA+TGG - Chr6:21299479-21299498 MsG0680031506.01.T01:intron 55.0%
! TGTGCAGAGGTGCACGTAAC+TGG + Chr6:21300762-21300781 None:intergenic 55.0%
!! CAAGGAACTTGCTGATCGCG+TGG - Chr6:21302305-21302324 MsG0680031506.01.T01:intron 55.0%
!! CAGGATTAGCTGCCGATGGA+AGG - Chr6:21301675-21301694 MsG0680031506.01.T01:intron 55.0%
!! GGGACTGGTTGGTTAGAGTC+GGG - Chr6:21298784-21298803 MsG0680031506.01.T01:intron 55.0%
!! GTAGCAGGATTAGCTGCCGA+TGG - Chr6:21301671-21301690 MsG0680031506.01.T01:intron 55.0%
!!! GGCTGGTGCCGTTGTGTTTT+AGG - Chr6:21303206-21303225 MsG0680031506.01.T01:intron 55.0%
!!! GGTGCCGTTGTGTTTTAGGG+AGG - Chr6:21303210-21303229 MsG0680031506.01.T01:intron 55.0%
CAACGGCACCAGCCTCATAC+GGG + Chr6:21303200-21303219 None:intergenic 60.0%
CATTGACACGCGTCGGATCC+CGG - Chr6:21299043-21299062 MsG0680031506.01.T01:intron 60.0%
CTGGCATCGCCTGGTCTGTA+TGG - Chr6:21297805-21297824 MsG0680031506.01.T01:CDS 60.0%
GCGGATATGACCTGCCGACA+AGG - Chr6:21303809-21303828 MsG0680031506.01.T01:intron 60.0%
GCTGCTTAGTGCATTGCCCC+AGG + Chr6:21301479-21301498 None:intergenic 60.0%
TGCAATCGGGAAGGGCAGAC+AGG - Chr6:21302679-21302698 MsG0680031506.01.T01:intron 60.0%
CACGCCGTTCATCGCCACTC+TGG - Chr6:21299474-21299493 MsG0680031506.01.T01:intron 65.0%
GTGCTGCAATCGGGAAGGGC+AGG - Chr6:21301111-21301130 MsG0680031506.01.T01:intron 65.0%
TGCAATCGGGAAGGGCAGGC+AGG - Chr6:21301115-21301134 MsG0680031506.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 21297790 21304446 21297790 ID=MsG0680031506.01;Name=MsG0680031506.01
Chr6 mRNA 21297790 21304446 21297790 ID=MsG0680031506.01.T01;Parent=MsG0680031506.01;Name=MsG0680031506.01.T01;_AED=0.49;_eAED=0.71;_QI=0|0|0|1|0.7|0.63|11|0|322
Chr6 exon 21304299 21304446 21304299 ID=MsG0680031506.01.T01:exon:13484;Parent=MsG0680031506.01.T01
Chr6 exon 21302914 21302972 21302914 ID=MsG0680031506.01.T01:exon:13483;Parent=MsG0680031506.01.T01
Chr6 exon 21302689 21302819 21302689 ID=MsG0680031506.01.T01:exon:13482;Parent=MsG0680031506.01.T01
Chr6 exon 21301421 21301557 21301421 ID=MsG0680031506.01.T01:exon:13481;Parent=MsG0680031506.01.T01
Chr6 exon 21301262 21301320 21301262 ID=MsG0680031506.01.T01:exon:13480;Parent=MsG0680031506.01.T01
Chr6 exon 21300495 21300568 21300495 ID=MsG0680031506.01.T01:exon:13479;Parent=MsG0680031506.01.T01
Chr6 exon 21299693 21299777 21299693 ID=MsG0680031506.01.T01:exon:13478;Parent=MsG0680031506.01.T01
Chr6 exon 21299525 21299571 21299525 ID=MsG0680031506.01.T01:exon:13477;Parent=MsG0680031506.01.T01
Chr6 exon 21298384 21298449 21298384 ID=MsG0680031506.01.T01:exon:13476;Parent=MsG0680031506.01.T01
Chr6 exon 21298195 21298285 21298195 ID=MsG0680031506.01.T01:exon:13475;Parent=MsG0680031506.01.T01
Chr6 exon 21297790 21297861 21297790 ID=MsG0680031506.01.T01:exon:13474;Parent=MsG0680031506.01.T01
Chr6 CDS 21304299 21304446 21304299 ID=MsG0680031506.01.T01:cds;Parent=MsG0680031506.01.T01
Chr6 CDS 21302914 21302972 21302914 ID=MsG0680031506.01.T01:cds;Parent=MsG0680031506.01.T01
Chr6 CDS 21302689 21302819 21302689 ID=MsG0680031506.01.T01:cds;Parent=MsG0680031506.01.T01
Chr6 CDS 21301421 21301557 21301421 ID=MsG0680031506.01.T01:cds;Parent=MsG0680031506.01.T01
Chr6 CDS 21301262 21301320 21301262 ID=MsG0680031506.01.T01:cds;Parent=MsG0680031506.01.T01
Chr6 CDS 21300495 21300568 21300495 ID=MsG0680031506.01.T01:cds;Parent=MsG0680031506.01.T01
Chr6 CDS 21299693 21299777 21299693 ID=MsG0680031506.01.T01:cds;Parent=MsG0680031506.01.T01
Chr6 CDS 21299525 21299571 21299525 ID=MsG0680031506.01.T01:cds;Parent=MsG0680031506.01.T01
Chr6 CDS 21298384 21298449 21298384 ID=MsG0680031506.01.T01:cds;Parent=MsG0680031506.01.T01
Chr6 CDS 21298195 21298285 21298195 ID=MsG0680031506.01.T01:cds;Parent=MsG0680031506.01.T01
Chr6 CDS 21297790 21297861 21297790 ID=MsG0680031506.01.T01:cds;Parent=MsG0680031506.01.T01
Gene Sequence

>MsG0680031506.01.T01

ATGCAGAATCAACTGCTGGCATCGCCTGGTCTGTATGGTAATTGTGTGAAAACATTACCTACCTGCATGTCACAGGTTCGAATGCTGGCAAATGGAGAATGGAGAGTTGTTGTTGACATTGATGATGATGATGATGATGATGATGATTGCACATACGTCAAATACGACACTGACACGCATGTCGATACTAAGGATGGAATTGTTTTGGGTGTCGAGAAGCTTATCCATTCGAAAATGATGCTTTCGGGTTCCAATAGAAGAATTCACGCCGTTCATCGCCACTCTGGAATGGTACTTTGTTATTTACATTTTGCTCACTCATCTTGTTACTGTCTTTCAAGAATGTTTATTCCGGTTATGTTTCTTTTCAGCGTGTATGGTGATCCAATTCCTGTCAAGGAACTTGCTGATCGAGTGGCTAGTTACGTGCACCTCTGCACATTATACTGGTGGCTAAGGTGCAGTTGTTGTATTTGTGGTTACGACAGAGATGGACCACAGTTGTACATGGTTGAACCTTCTGGTGTCTCATATGCTGTAGCAGGATTAGCTGCCGATGGAAGGCAAATTGTTGCCAGGGCTAAGTCCGAAGCAACTAACTACGACAGACCTTTTGGATGTGGTGTCATACTAGGTGGTTACGACAGAGATGGACCACAGTTGTACATGGTCGAACCTTCTGGTGTCTCTTATAGGTATTTTGGTGCTGCAATCGGGAAGGGCAGACAGGCTGCGAAAACGGAGATTGAAAAGTTGAAGCTTGCGGATATGACCTGCCGACAAGGTGTTATTGAAGTAGCTAAGATTATATATGGAGTTCATGACGAGGCAAAGGATAAAGATTTTGAACTCGAAATGAGCTGGGTGTGCGATGAATCAAACCGTCAACATGAAAAGGTTCCAGAGGAGCTTCTAGAAGAAGCCAAGACAGCAGCTAAATTAGCTCTCGAAGAAATGGATGCAGATTAA

Protein sequence

>MsG0680031506.01.T01

MQNQLLASPGLYGNCVKTLPTCMSQVRMLANGEWRVVVDIDDDDDDDDDCTYVKYDTDTHVDTKDGIVLGVEKLIHSKMMLSGSNRRIHAVHRHSGMVLCYLHFAHSSCYCLSRMFIPVMFLFSVYGDPIPVKELADRVASYVHLCTLYWWLRCSCCICGYDRDGPQLYMVEPSGVSYAVAGLAADGRQIVARAKSEATNYDRPFGCGVILGGYDRDGPQLYMVEPSGVSYRYFGAAIGKGRQAAKTEIEKLKLADMTCRQGVIEVAKIIYGVHDEAKDKDFELEMSWVCDESNRQHEKVPEELLEEAKTAAKLALEEMDAD*