AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006968.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006968.01.T01 MTR_0565s0010 98.904 365 4 0 1 365 1 365 0.0 733
MsG0280006968.01.T01 MTR_3g024510 80.508 354 67 2 13 365 18 370 0.0 589
MsG0280006968.01.T01 MTR_8g087890 71.585 366 100 3 1 365 1 363 0.0 540
MsG0280006968.01.T01 MTR_3g005660 56.305 341 144 4 28 365 32 370 2.41e-130 378
MsG0280006968.01.T01 MTR_3g005650 52.408 353 162 5 13 365 11 357 1.98e-125 365
MsG0280006968.01.T01 MTR_3g098270 45.205 365 183 7 14 364 7 368 5.83e-109 324
MsG0280006968.01.T01 MTR_8g087870 46.356 343 161 5 29 365 26 351 2.60e-105 313
MsG0280006968.01.T01 MTR_3g023220 45.266 338 172 4 27 364 28 352 2.14e-104 311
MsG0280006968.01.T01 MTR_4g035353 45.098 357 189 6 13 365 10 363 6.26e-104 310
MsG0280006968.01.T01 MTR_2g017955 46.450 338 171 5 29 364 30 359 1.93e-102 307
MsG0280006968.01.T01 MTR_2g017925 44.382 356 182 6 13 364 11 354 7.33e-102 305
MsG0280006968.01.T01 MTR_2g017875 45.930 344 174 6 25 365 27 361 1.58e-101 304
MsG0280006968.01.T01 MTR_2g017965 43.716 366 190 9 7 364 3 360 3.99e-96 291
MsG0280006968.01.T01 MTR_2g017915 42.192 365 175 7 7 364 3 338 1.97e-92 281
MsG0280006968.01.T01 MTR_2g033920 40.960 354 201 7 15 364 18 367 2.97e-87 268
MsG0280006968.01.T01 MTR_2g033930 38.920 352 209 6 15 364 15 362 7.38e-83 256
MsG0280006968.01.T01 MTR_4g122200 38.056 360 214 8 9 364 13 367 7.53e-83 256
MsG0280006968.01.T01 MTR_5g078210 38.329 347 202 11 6 348 1 339 5.58e-78 244
MsG0280006968.01.T01 MTR_1g079540 39.286 336 198 5 15 346 12 345 9.77e-76 238
MsG0280006968.01.T01 MTR_5g009100 37.838 333 201 5 34 363 48 377 2.19e-75 238
MsG0280006968.01.T01 MTR_7g116570 37.427 342 203 6 8 344 11 346 5.19e-73 231
MsG0280006968.01.T01 MTR_7g116500 39.104 335 193 7 33 362 34 362 5.98e-72 229
MsG0280006968.01.T01 MTR_1g069175 38.889 342 203 5 13 350 14 353 2.13e-70 225
MsG0280006968.01.T01 MTR_1g024890 35.613 351 219 6 14 360 12 359 2.42e-70 224
MsG0280006968.01.T01 MTR_7g116510 35.854 357 222 7 13 365 5 358 1.23e-69 223
MsG0280006968.01.T01 MTR_3g052490 38.286 350 197 9 23 362 23 363 1.44e-69 223
MsG0280006968.01.T01 MTR_3g052480 37.234 376 212 10 5 365 2 368 7.44e-69 221
MsG0280006968.01.T01 MTR_7g116520 36.872 358 216 8 9 362 12 363 9.51e-69 221
MsG0280006968.01.T01 MTR_8g079050 36.517 356 214 7 1 344 1 356 1.32e-68 220
MsG0280006968.01.T01 MTR_2g018015 39.645 338 132 7 29 364 33 300 3.91e-68 217
MsG0280006968.01.T01 MTR_5g093090 37.396 361 206 11 13 362 8 359 6.19e-68 218
MsG0280006968.01.T01 MTR_1g025780 35.806 310 189 6 30 335 39 342 9.49e-67 215
MsG0280006968.01.T01 MTR_1g079530 36.212 359 208 8 14 365 11 355 1.24e-66 215
MsG0280006968.01.T01 MTR_4g019880 37.389 337 196 8 14 341 13 343 4.50e-66 213
MsG0280006968.01.T01 MTR_4g108690 35.783 313 193 6 34 342 29 337 6.54e-66 213
MsG0280006968.01.T01 MTR_3g435540 35.821 335 202 9 13 342 7 333 1.54e-65 212
MsG0280006968.01.T01 MTR_5g084790 35.447 347 216 6 1 343 1 343 1.82e-65 211
MsG0280006968.01.T01 MTR_3g082830 37.188 320 193 6 27 342 33 348 2.10e-65 211
MsG0280006968.01.T01 MTR_6g021530 36.522 345 205 7 14 346 8 350 2.86e-65 211
MsG0280006968.01.T01 MTR_1g025760 34.375 352 209 8 1 336 39 384 2.94e-64 210
MsG0280006968.01.T01 MTR_2g084585 35.088 342 212 7 6 342 4 340 4.45e-64 208
MsG0280006968.01.T01 MTR_2g033920 41.281 281 159 5 15 292 18 295 4.49e-64 206
MsG0280006968.01.T01 MTR_8g074570 37.791 344 186 10 13 340 17 348 7.47e-64 208
MsG0280006968.01.T01 MTR_4g056160 35.694 353 203 10 16 357 11 350 1.04e-63 207
MsG0280006968.01.T01 MTR_1g025700 36.452 310 190 5 30 336 48 353 1.61e-63 207
MsG0280006968.01.T01 MTR_5g084750 35.569 343 208 8 6 340 1 338 6.07e-63 205
MsG0280006968.01.T01 MTR_1g025720 35.806 310 190 6 31 336 36 340 6.36e-63 205
MsG0280006968.01.T01 MTR_3g052580 35.068 365 211 11 13 365 11 361 1.20e-62 205
MsG0280006968.01.T01 MTR_3g052580 35.068 365 211 11 13 365 10 360 2.44e-62 205
MsG0280006968.01.T01 MTR_3g114120 34.516 310 196 5 30 336 45 350 6.87e-62 202
MsG0280006968.01.T01 MTR_2g100620 36.364 319 192 7 30 342 29 342 2.28e-61 201
MsG0280006968.01.T01 MTR_7g008060 33.934 333 202 5 13 341 11 329 3.98e-61 200
MsG0280006968.01.T01 MTR_8g014910 35.398 339 205 9 13 342 10 343 6.48e-61 200
MsG0280006968.01.T01 MTR_4g056280 36.392 316 193 6 30 341 28 339 6.80e-61 200
MsG0280006968.01.T01 MTR_5g084770 36.443 343 204 9 8 341 1 338 8.82e-61 199
MsG0280006968.01.T01 MTR_3g114090 34.839 310 194 6 31 336 35 340 9.31e-60 197
MsG0280006968.01.T01 MTR_3g464730 33.724 341 219 6 6 342 2 339 9.98e-60 196
MsG0280006968.01.T01 MTR_1g025680 34.821 336 204 8 11 336 8 338 1.04e-59 199
MsG0280006968.01.T01 MTR_8g075230 34.356 326 206 6 28 349 32 353 2.26e-58 193
MsG0280006968.01.T01 MTR_3g021460 33.520 358 216 9 11 364 10 349 3.14e-56 187
MsG0280006968.01.T01 MTR_5g078210 36.677 319 190 11 6 319 1 312 3.40e-56 187
MsG0280006968.01.T01 MTR_5g022640 32.915 319 205 6 28 341 39 353 4.33e-56 187
MsG0280006968.01.T01 MTR_0009s0250 33.528 343 201 12 13 346 12 336 1.06e-55 186
MsG0280006968.01.T01 MTR_2g461580 31.793 368 228 9 1 364 1 349 1.76e-55 186
MsG0280006968.01.T01 MTR_5g022630 30.966 352 231 9 6 349 15 362 2.14e-55 186
MsG0280006968.01.T01 MTR_2g015080 30.994 342 214 9 14 337 15 352 6.83e-54 182
MsG0280006968.01.T01 MTR_5g074270 34.177 316 198 7 34 343 35 346 2.91e-53 180
MsG0280006968.01.T01 MTR_2g017925 39.004 241 134 5 125 364 23 251 4.36e-53 177
MsG0280006968.01.T01 MTR_8g075200 31.464 321 212 6 28 344 37 353 6.93e-53 180
MsG0280006968.01.T01 MTR_2g017895 35.294 289 159 6 79 365 5 267 1.07e-52 176
MsG0280006968.01.T01 MTR_8g075220 30.395 329 220 6 28 349 36 362 2.26e-52 178
MsG0280006968.01.T01 MTR_5g093090 37.801 291 162 10 13 292 8 290 4.54e-47 162
MsG0280006968.01.T01 MTR_4g087985 31.746 315 200 8 34 337 38 348 2.21e-46 162
MsG0280006968.01.T01 MTR_5g083040 31.498 327 201 8 29 341 29 346 2.67e-46 162
MsG0280006968.01.T01 MTR_2g044100 34.118 340 203 12 34 362 45 374 3.42e-46 162
MsG0280006968.01.T01 MTR_1g025910 32.915 319 196 6 37 351 41 345 1.21e-44 158
MsG0280006968.01.T01 MTR_8g074580 31.965 341 216 7 28 360 40 372 1.60e-44 158
MsG0280006968.01.T01 MTR_8g022790 30.189 371 232 12 6 365 7 361 3.84e-44 156
MsG0280006968.01.T01 MTR_8g022810 29.582 311 206 6 34 337 43 347 3.16e-43 154
MsG0280006968.01.T01 MTR_8g031390 29.651 344 214 9 24 355 29 356 4.42e-43 154
MsG0280006968.01.T01 MTR_0127s0040 31.818 242 160 4 125 365 1 238 1.80e-42 148
MsG0280006968.01.T01 MTR_8g074560 29.730 370 235 11 6 364 12 367 2.02e-42 152
MsG0280006968.01.T01 MTR_8g031420 28.977 352 227 9 16 357 19 357 5.84e-42 150
MsG0280006968.01.T01 MTR_8g031400 30.030 333 211 8 24 347 29 348 1.03e-41 150
MsG0280006968.01.T01 MTR_5g087690 30.029 343 211 8 34 364 52 377 1.95e-40 147
MsG0280006968.01.T01 MTR_8g031430 29.341 334 214 8 24 348 29 349 1.67e-39 144
MsG0280006968.01.T01 MTR_8g031390 30.508 295 183 7 24 312 29 307 1.12e-37 138
MsG0280006968.01.T01 MTR_3g011860 64.835 91 32 0 232 322 232 322 4.79e-36 134
MsG0280006968.01.T01 MTR_1g079590 35.859 198 124 3 13 208 12 208 5.16e-35 128
MsG0280006968.01.T01 MTR_7g087190 27.577 359 223 9 29 359 40 389 3.56e-34 130
MsG0280006968.01.T01 MTR_7g033155 25.313 399 240 10 7 357 6 394 1.35e-32 126
MsG0280006968.01.T01 MTR_5g093090 40.291 206 107 9 13 207 8 208 5.95e-32 120
MsG0280006968.01.T01 MTR_1g030340 27.838 370 219 10 4 341 14 367 6.04e-32 124
MsG0280006968.01.T01 MTR_8g089805 27.763 371 230 11 6 347 12 373 1.62e-30 120
MsG0280006968.01.T01 MTR_1g030268 27.487 382 235 12 8 361 13 380 4.83e-30 119
MsG0280006968.01.T01 MTR_7g033150 24.409 381 241 10 14 357 10 380 1.86e-29 117
MsG0280006968.01.T01 MTR_8g028160 25.967 362 223 10 34 365 38 384 2.56e-29 117
MsG0280006968.01.T01 MTR_1g030230 27.202 386 244 11 1 361 1 374 5.71e-29 115
MsG0280006968.01.T01 MTR_1g030275 27.247 356 224 10 11 341 16 361 7.82e-29 115
MsG0280006968.01.T01 MTR_7g111780 26.012 346 229 8 25 357 29 360 1.69e-28 114
MsG0280006968.01.T01 MTR_7g116870 25.260 384 231 12 9 356 7 370 2.02e-28 114
MsG0280006968.01.T01 MTR_1g030220 26.720 378 226 11 1 341 1 364 3.34e-28 114
MsG0280006968.01.T01 MTR_8g038680 28.779 344 200 9 31 344 27 355 3.95e-28 113
MsG0280006968.01.T01 MTR_8g022810 26.452 310 162 8 34 336 43 293 1.34e-27 111
MsG0280006968.01.T01 MTR_2g087292 27.941 340 155 12 13 346 12 267 2.04e-27 109
MsG0280006968.01.T01 MTR_6g007100 28.116 345 211 11 31 357 32 357 4.20e-27 110
MsG0280006968.01.T01 MTR_1108s0010 30.952 210 130 4 133 341 3 198 4.22e-27 107
MsG0280006968.01.T01 MTR_6g007090 28.488 344 200 10 29 344 36 361 7.56e-27 110
MsG0280006968.01.T01 MTR_6g007095 27.476 313 199 8 59 357 394 692 1.33e-26 111
MsG0280006968.01.T01 MTR_6g007095 27.809 356 209 12 31 357 40 376 2.75e-23 101
MsG0280006968.01.T01 MTR_1g060500 25.816 337 216 10 34 357 42 357 2.38e-26 108
MsG0280006968.01.T01 MTR_5g074210 37.226 137 85 1 208 343 66 202 9.08e-26 103
MsG0280006968.01.T01 MTR_4g036375 40.132 152 86 4 30 178 28 177 2.15e-25 102
MsG0280006968.01.T01 MTR_7g033165 26.629 353 223 10 31 357 32 374 4.84e-25 105
MsG0280006968.01.T01 MTR_1g060490 27.445 317 192 12 34 337 39 330 4.97e-25 104
MsG0280006968.01.T01 MTR_2g015630 27.576 330 205 12 37 342 36 355 1.98e-24 103
MsG0280006968.01.T01 MTR_3g463960 24.706 340 209 11 34 343 46 368 5.40e-24 102
MsG0280006968.01.T01 MTR_3g463950 24.706 340 209 11 34 343 46 368 5.40e-24 102
MsG0280006968.01.T01 MTR_3g463970 24.706 340 209 11 34 343 46 368 5.40e-24 102
MsG0280006968.01.T01 MTR_3g463940 24.706 340 209 11 34 343 46 368 5.40e-24 102
MsG0280006968.01.T01 MTR_7g113860 25.000 368 224 11 26 357 23 374 1.29e-23 100
MsG0280006968.01.T01 MTR_3g463930 24.706 340 216 11 34 343 46 375 1.67e-23 100
MsG0280006968.01.T01 MTR_7g113860 25.193 389 233 13 10 357 9 380 3.41e-23 99.8
MsG0280006968.01.T01 MTR_7g104220 26.562 320 192 11 34 337 44 336 1.27e-22 97.8
MsG0280006968.01.T01 MTR_6g049220 52.809 89 39 2 30 115 28 116 4.23e-22 92.4
MsG0280006968.01.T01 MTR_1g082390 24.457 368 231 10 8 344 7 358 1.30e-21 95.1
MsG0280006968.01.T01 MTR_7g111780 28.431 204 133 4 162 357 63 261 1.59e-21 93.2
MsG0280006968.01.T01 MTR_8g089805 26.761 284 176 8 91 347 27 305 1.89e-21 94.0
MsG0280006968.01.T01 MTR_4g104240 24.234 359 238 10 6 341 8 355 2.65e-21 94.4
MsG0280006968.01.T01 MTR_1g030268 28.000 300 186 9 11 292 16 303 6.40e-21 92.8
MsG0280006968.01.T01 MTR_1g030265 26.087 299 182 8 91 361 60 347 1.18e-20 92.0
MsG0280006968.01.T01 MTR_2g043980 25.490 357 222 14 9 343 7 341 2.01e-20 91.7
MsG0280006968.01.T01 MTR_8g012540 28.618 304 180 9 31 312 27 315 2.07e-20 91.3
MsG0280006968.01.T01 MTR_1g092740 25.223 337 190 12 34 345 40 339 2.74e-20 91.3
MsG0280006968.01.T01 MTR_2g015590 25.904 332 212 10 32 338 28 350 4.50e-19 87.8
MsG0280006968.01.T01 MTR_1g092690 26.168 321 190 11 34 337 53 343 6.77e-19 87.4
MsG0280006968.01.T01 MTR_2g015580 25.378 331 215 11 34 342 49 369 8.07e-19 87.4
MsG0280006968.01.T01 MTR_3g069780 23.724 333 218 14 34 343 32 351 1.60e-18 86.3
MsG0280006968.01.T01 MTR_3g438030 23.724 333 218 14 34 343 32 351 3.49e-18 85.5
MsG0280006968.01.T01 MTR_1g092750 25.545 321 194 13 34 337 42 334 4.01e-18 85.1
MsG0280006968.01.T01 MTR_2g015650 27.928 333 206 13 34 343 33 354 1.37e-17 83.6
MsG0280006968.01.T01 MTR_1g079570 27.737 137 97 2 226 362 4 138 6.76e-17 77.4
MsG0280006968.01.T01 MTR_7g113860 24.092 303 183 9 88 357 18 306 1.56e-16 79.7
MsG0280006968.01.T01 MTR_2g015670 26.946 334 194 13 34 343 33 340 3.20e-15 76.6
MsG0280006968.01.T01 MTR_2g087190 49.367 79 15 1 237 315 93 146 4.35e-15 73.2
MsG0280006968.01.T01 MTR_5g084880 35.849 106 68 0 187 292 7 112 6.52e-15 71.6
MsG0280006968.01.T01 MTR_1g092760 26.087 322 190 12 34 337 41 332 9.30e-15 75.1
MsG0280006968.01.T01 MTR_8g062580 33.051 118 72 3 227 343 67 178 1.85e-14 72.8
MsG0280006968.01.T01 MTR_4g056220 34.259 108 68 2 235 341 71 176 2.29e-14 71.2
MsG0280006968.01.T01 MTR_3g448360 22.455 334 222 12 34 343 31 351 2.71e-14 73.9
MsG0280006968.01.T01 MTR_3g069520 23.881 335 213 13 34 343 32 349 2.21e-13 70.9
MsG0280006968.01.T01 MTR_4g036385 30.476 105 72 1 241 344 22 126 1.50e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006968.01.T01 AT1G29670 74.790 357 82 4 14 365 78 431 0.0 544
MsG0280006968.01.T01 AT1G29670 74.790 357 82 4 14 365 10 363 0.0 541
MsG0280006968.01.T01 AT5G45670 67.123 365 117 1 1 365 1 362 1.22e-179 503
MsG0280006968.01.T01 AT1G29660 65.915 355 120 1 11 365 11 364 6.30e-177 496
MsG0280006968.01.T01 AT4G18970 70.149 335 100 0 31 365 27 361 3.56e-174 489
MsG0280006968.01.T01 AT4G18970 70.149 335 100 0 31 365 27 361 8.57e-173 487
MsG0280006968.01.T01 AT1G33811 54.519 343 147 5 29 365 31 370 1.30e-125 366
MsG0280006968.01.T01 AT1G71691 47.564 349 175 6 17 365 43 383 1.23e-113 336
MsG0280006968.01.T01 AT5G08460 45.789 380 186 7 3 365 9 385 2.47e-111 330
MsG0280006968.01.T01 AT5G15720 46.045 354 180 7 20 365 14 364 7.69e-107 318
MsG0280006968.01.T01 AT1G71250 45.777 367 186 6 9 365 10 373 2.04e-106 317
MsG0280006968.01.T01 AT2G19010 43.220 354 182 6 13 364 11 347 9.57e-101 302
MsG0280006968.01.T01 AT2G19010 43.220 354 182 6 13 364 41 377 3.96e-100 301
MsG0280006968.01.T01 AT2G19050 43.440 343 173 6 26 365 25 349 4.08e-96 290
MsG0280006968.01.T01 AT2G19060 43.827 324 162 6 28 346 26 334 3.16e-93 283
MsG0280006968.01.T01 AT4G30140 47.493 339 153 8 28 362 29 346 1.28e-89 273
MsG0280006968.01.T01 AT1G71691 44.161 274 149 4 92 365 13 282 6.14e-84 256
MsG0280006968.01.T01 AT1G71691 47.464 276 138 5 17 292 43 311 9.84e-83 254
MsG0280006968.01.T01 AT2G19050 47.826 253 124 2 26 278 25 269 1.05e-82 253
MsG0280006968.01.T01 AT5G15720 43.750 288 156 5 82 365 48 333 2.51e-81 251
MsG0280006968.01.T01 AT5G15720 45.552 281 143 6 20 292 14 292 4.13e-77 240
MsG0280006968.01.T01 AT4G10950 37.278 338 206 5 30 364 69 403 1.59e-75 239
MsG0280006968.01.T01 AT2G23540 40.252 318 183 5 34 344 50 367 2.88e-74 235
MsG0280006968.01.T01 AT4G10950 36.391 338 205 5 30 364 69 399 9.17e-72 229
MsG0280006968.01.T01 AT5G33370 36.119 335 209 5 33 365 31 362 5.74e-71 226
MsG0280006968.01.T01 AT3G50400 38.298 329 193 7 25 344 27 354 1.15e-70 226
MsG0280006968.01.T01 AT5G37690 37.658 316 189 7 34 346 29 339 2.08e-70 224
MsG0280006968.01.T01 AT3G04290 39.683 315 178 7 33 341 30 338 4.52e-68 219
MsG0280006968.01.T01 AT4G28780 38.217 314 184 6 33 341 32 340 4.52e-67 216
MsG0280006968.01.T01 AT1G74460 37.061 313 189 7 34 342 25 333 7.84e-67 215
MsG0280006968.01.T01 AT5G55050 38.438 333 188 9 20 341 27 353 2.79e-65 212
MsG0280006968.01.T01 AT2G42990 35.693 339 209 7 13 347 10 343 2.80e-65 211
MsG0280006968.01.T01 AT5G18430 38.679 318 185 5 33 344 29 342 3.71e-65 211
MsG0280006968.01.T01 AT3G53100 37.725 334 198 7 14 342 11 339 5.09e-65 210
MsG0280006968.01.T01 AT5G37690 33.721 344 212 8 6 346 1 331 8.36e-65 209
MsG0280006968.01.T01 AT1G75880 36.991 319 188 8 30 341 50 362 4.72e-63 206
MsG0280006968.01.T01 AT1G75880 37.304 319 186 9 30 341 50 361 7.04e-63 205
MsG0280006968.01.T01 AT2G04570 34.218 339 215 6 14 348 10 344 1.08e-62 204
MsG0280006968.01.T01 AT5G22810 35.938 320 194 7 30 342 32 347 4.17e-62 203
MsG0280006968.01.T01 AT5G42170 34.385 317 195 7 30 341 48 356 5.40e-62 203
MsG0280006968.01.T01 AT3G14820 32.571 350 215 10 5 344 2 340 9.17e-62 202
MsG0280006968.01.T01 AT1G75890 34.954 329 197 10 28 347 43 363 1.76e-61 201
MsG0280006968.01.T01 AT1G75890 34.954 329 197 10 28 347 72 392 2.69e-61 202
MsG0280006968.01.T01 AT5G41890 35.150 367 211 9 18 365 17 375 5.83e-61 201
MsG0280006968.01.T01 AT1G75890 33.724 341 198 10 28 347 43 376 2.25e-59 196
MsG0280006968.01.T01 AT5G03810 34.535 333 208 8 16 342 13 341 4.66e-59 195
MsG0280006968.01.T01 AT5G03820 34.384 349 218 8 1 342 1 345 9.73e-59 194
MsG0280006968.01.T01 AT5G03820 35.329 334 205 8 16 342 44 373 2.38e-58 194
MsG0280006968.01.T01 AT3G16370 34.154 325 203 8 24 342 22 341 7.23e-58 192
MsG0280006968.01.T01 AT4G26790 33.648 318 203 6 29 342 26 339 1.79e-57 191
MsG0280006968.01.T01 AT4G26790 33.648 318 203 6 29 342 26 339 1.79e-57 191
MsG0280006968.01.T01 AT1G75900 32.595 316 204 6 30 341 41 351 2.31e-57 191
MsG0280006968.01.T01 AT1G59406 33.333 345 207 10 9 341 3 336 3.55e-57 190
MsG0280006968.01.T01 AT1G59030 33.333 345 207 10 9 341 3 336 3.55e-57 190
MsG0280006968.01.T01 AT1G58725 33.333 345 207 10 9 341 3 336 3.55e-57 190
MsG0280006968.01.T01 AT4G16230 40.000 240 138 5 13 248 10 247 5.02e-56 184
MsG0280006968.01.T01 AT2G31540 35.016 317 198 7 31 342 34 347 6.99e-56 187
MsG0280006968.01.T01 AT2G24560 34.591 318 198 8 31 342 33 346 1.49e-55 186
MsG0280006968.01.T01 AT1G20132 34.603 315 192 7 28 335 57 364 8.70e-55 184
MsG0280006968.01.T01 AT1G20135 32.024 331 205 8 10 335 5 320 5.82e-54 181
MsG0280006968.01.T01 AT2G30310 33.956 321 196 9 31 342 33 346 1.77e-52 178
MsG0280006968.01.T01 AT5G63170 33.742 326 196 7 14 335 10 319 1.94e-52 177
MsG0280006968.01.T01 AT5G33370 37.262 263 161 4 32 292 30 290 2.46e-52 177
MsG0280006968.01.T01 AT2G30220 33.232 328 189 9 31 342 32 345 3.25e-52 177
MsG0280006968.01.T01 AT1G20120 31.761 318 209 6 31 344 77 390 3.35e-52 178
MsG0280006968.01.T01 AT2G03980 33.739 329 198 9 31 350 42 359 3.39e-52 177
MsG0280006968.01.T01 AT2G03980 33.739 329 198 9 31 350 42 359 3.39e-52 177
MsG0280006968.01.T01 AT2G03980 33.739 329 198 9 31 350 42 359 3.39e-52 177
MsG0280006968.01.T01 AT2G03980 33.739 329 198 9 31 350 42 359 3.39e-52 177
MsG0280006968.01.T01 AT1G58520 32.308 325 194 10 25 341 23 329 9.30e-52 176
MsG0280006968.01.T01 AT1G58525 32.308 325 194 10 25 341 23 329 9.30e-52 176
MsG0280006968.01.T01 AT1G58430 33.019 318 203 8 31 342 34 347 1.02e-50 173
MsG0280006968.01.T01 AT1G73610 33.739 329 191 8 24 342 21 332 1.35e-49 170
MsG0280006968.01.T01 AT1G06990 32.390 318 204 7 31 342 36 348 2.89e-49 169
MsG0280006968.01.T01 AT1G23500 33.233 331 195 8 24 344 21 335 9.01e-49 168
MsG0280006968.01.T01 AT1G20130 31.611 329 206 8 28 343 180 502 4.06e-48 170
MsG0280006968.01.T01 AT1G20130 31.611 329 206 8 28 343 200 522 6.58e-48 170
MsG0280006968.01.T01 AT2G40250 30.218 321 210 7 34 345 38 353 3.99e-47 164
MsG0280006968.01.T01 AT3G43570 29.912 341 195 9 9 341 3 307 5.82e-47 162
MsG0280006968.01.T01 AT5G45950 30.564 337 222 9 12 345 20 347 3.46e-46 161
MsG0280006968.01.T01 AT1G53920 29.714 350 221 7 30 365 46 384 1.33e-43 155
MsG0280006968.01.T01 AT1G71120 31.118 331 203 9 27 347 26 341 6.13e-43 153
MsG0280006968.01.T01 AT3G43550 31.864 295 182 9 6 292 3 286 2.54e-42 149
MsG0280006968.01.T01 AT5G45960 28.797 316 213 7 28 335 43 354 2.48e-41 149
MsG0280006968.01.T01 AT1G75930 30.696 316 199 9 34 343 31 332 3.37e-40 145
MsG0280006968.01.T01 AT1G75920 29.619 341 216 8 15 344 6 333 1.45e-39 144
MsG0280006968.01.T01 AT2G24560 33.088 272 172 8 31 296 33 300 5.86e-37 136
MsG0280006968.01.T01 AT1G75910 30.117 342 215 10 14 344 5 333 2.34e-36 135
MsG0280006968.01.T01 AT1G75920 28.487 337 208 8 28 344 20 343 1.13e-35 133
MsG0280006968.01.T01 AT5G40990 30.031 323 204 8 34 343 39 352 1.17e-35 134
MsG0280006968.01.T01 AT3G14225 30.094 319 209 7 34 343 39 352 3.74e-35 132
MsG0280006968.01.T01 AT3G14225 29.907 321 211 7 34 343 39 356 9.13e-35 131
MsG0280006968.01.T01 AT2G04020 36.620 213 121 5 31 238 42 245 1.99e-34 128
MsG0280006968.01.T01 AT2G04020 36.538 208 118 5 31 233 42 240 7.10e-33 125
MsG0280006968.01.T01 AT1G53940 28.659 328 216 8 34 350 41 361 3.12e-32 124
MsG0280006968.01.T01 AT1G09390 27.273 374 243 9 1 356 1 363 3.86e-32 124
MsG0280006968.01.T01 AT3G05180 28.378 370 209 14 26 359 30 379 4.97e-32 124
MsG0280006968.01.T01 AT1G53990 28.483 323 210 8 34 347 37 347 2.86e-31 122
MsG0280006968.01.T01 AT2G31550 30.622 209 142 3 137 344 2 208 3.45e-31 118
MsG0280006968.01.T01 AT1G56670 26.503 366 231 10 11 356 19 366 1.63e-30 120
MsG0280006968.01.T01 AT3G27950 25.532 376 242 9 6 356 3 365 2.02e-30 119
MsG0280006968.01.T01 AT1G75920 27.961 304 201 7 46 344 15 305 5.22e-30 117
MsG0280006968.01.T01 AT1G54790 26.440 382 234 11 10 356 7 376 5.24e-30 119
MsG0280006968.01.T01 AT1G75920 26.844 339 197 8 15 344 6 302 1.69e-29 116
MsG0280006968.01.T01 AT4G16233 42.636 129 72 2 238 365 3 130 2.19e-29 110
MsG0280006968.01.T01 AT3G62280 28.746 327 209 10 27 341 31 345 9.02e-29 115
MsG0280006968.01.T01 AT3G26430 26.836 354 223 10 31 357 30 374 7.89e-28 112
MsG0280006968.01.T01 AT1G54020 26.377 345 227 11 11 348 9 333 1.07e-27 112
MsG0280006968.01.T01 AT1G67830 26.100 341 214 9 29 341 27 357 1.61e-27 112
MsG0280006968.01.T01 AT3G48460 25.762 361 231 13 8 342 8 357 4.45e-27 110
MsG0280006968.01.T01 AT1G54790 23.834 386 248 10 6 356 1 375 9.31e-26 107
MsG0280006968.01.T01 AT3G09930 27.329 322 191 14 34 337 41 337 8.43e-25 103
MsG0280006968.01.T01 AT3G09930 27.329 322 191 14 34 337 41 337 8.43e-25 103
MsG0280006968.01.T01 AT1G54030 26.959 319 204 11 34 348 54 347 1.11e-24 104
MsG0280006968.01.T01 AT1G28640 25.287 348 217 13 36 355 39 371 1.89e-24 103
MsG0280006968.01.T01 AT5G14450 26.912 353 222 11 31 357 40 382 6.06e-24 102
MsG0280006968.01.T01 AT5G03610 27.619 315 198 11 34 337 45 340 6.64e-24 101
MsG0280006968.01.T01 AT1G28600 24.468 376 235 13 13 355 7 366 1.51e-23 100
MsG0280006968.01.T01 AT1G53940 29.167 264 175 7 34 292 41 297 2.17e-23 99.4
MsG0280006968.01.T01 AT5G03600 24.845 322 202 9 28 337 10 303 2.44e-23 99.4
MsG0280006968.01.T01 AT1G31550 25.610 328 206 10 36 338 40 354 3.23e-23 100
MsG0280006968.01.T01 AT1G54010 25.000 372 251 12 1 362 1 354 4.98e-23 99.4
MsG0280006968.01.T01 AT5G03600 24.845 322 202 9 28 337 45 338 5.06e-23 99.0
MsG0280006968.01.T01 AT2G27360 27.108 332 208 12 36 343 37 358 3.13e-22 97.4
MsG0280006968.01.T01 AT1G28650 25.215 349 216 12 36 355 41 373 3.21e-22 97.1
MsG0280006968.01.T01 AT1G54000 24.661 369 242 13 8 362 8 354 3.41e-22 97.1
MsG0280006968.01.T01 AT4G16220 46.429 112 57 2 13 122 11 121 4.47e-22 94.4
MsG0280006968.01.T01 AT1G28570 24.791 359 226 14 16 343 13 358 5.07e-22 96.7
MsG0280006968.01.T01 AT4G01130 24.654 361 226 13 13 341 14 360 1.06e-21 95.5
MsG0280006968.01.T01 AT3G14220 27.762 353 215 13 24 362 24 350 1.76e-21 94.7
MsG0280006968.01.T01 AT1G54790 22.816 412 246 12 6 356 1 401 8.43e-21 93.2
MsG0280006968.01.T01 AT1G28580 23.161 367 244 12 13 351 13 369 1.50e-20 92.4
MsG0280006968.01.T01 AT1G28660 24.207 347 222 12 36 355 39 371 1.90e-20 92.0
MsG0280006968.01.T01 AT1G28670 23.977 342 230 11 36 355 39 372 3.19e-20 91.3
MsG0280006968.01.T01 AT1G56670 26.599 297 185 8 11 292 19 297 3.30e-20 90.1
MsG0280006968.01.T01 AT1G31550 24.848 330 203 11 36 338 40 351 4.60e-20 90.9
MsG0280006968.01.T01 AT1G28610 25.069 363 231 14 1 337 1 348 5.84e-20 90.5
MsG0280006968.01.T01 AT3G62280 27.586 261 170 7 27 280 31 279 9.14e-20 89.0
MsG0280006968.01.T01 AT1G28660 23.919 347 222 13 36 355 39 370 1.48e-19 89.4
MsG0280006968.01.T01 AT3G14210 26.946 334 199 15 34 349 38 344 1.87e-17 83.6
MsG0280006968.01.T01 AT2G36325 26.959 319 193 13 34 337 49 342 4.89e-17 82.0
MsG0280006968.01.T01 AT1G54020 23.413 252 172 6 100 348 14 247 4.69e-16 78.2
MsG0280006968.01.T01 AT1G54020 23.413 252 172 6 100 348 14 247 4.69e-16 78.2
MsG0280006968.01.T01 AT1G54020 23.413 252 172 6 100 348 14 247 4.69e-16 78.2
MsG0280006968.01.T01 AT1G54030 25.856 263 168 9 34 292 54 293 8.60e-15 74.7
MsG0280006968.01.T01 AT1G54020 24.500 200 143 4 152 348 4 198 9.18e-15 73.6
MsG0280006968.01.T01 AT4G01130 25.871 201 123 6 160 341 81 274 1.00e-14 74.3
MsG0280006968.01.T01 AT1G28600 28.814 177 102 7 13 172 7 176 1.82e-12 66.6
MsG0280006968.01.T01 AT5G03590 37.838 111 59 4 3 110 8 111 3.75e-11 62.4

Find 83 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATCTATGTAAATGTTTA+TGG 0.121393 2:-8769936 MsG0280006968.01.T01:CDS
TCCCAATTGGTAAATTATTT+TGG 0.123489 2:-8770505 MsG0280006968.01.T01:CDS
ATAGGAATGGGTTCTTATTT+TGG 0.148038 2:-8769697 MsG0280006968.01.T01:CDS
GCAAGGAAAATGGCGTTATT+TGG 0.222275 2:-8770113 MsG0280006968.01.T01:CDS
ATGTTTGCAGTTGTATTTAA+TGG 0.245269 2:-8769372 MsG0280006968.01.T01:three_prime_UTR
CAATTATGGGGCAAGGAAAA+TGG 0.278362 2:-8770123 MsG0280006968.01.T01:CDS
GAAGCTGGAAATAGTGTTAT+TGG 0.291749 2:-8769656 MsG0280006968.01.T01:CDS
AAAGCTAATTACTTACCTTA+TGG 0.293691 2:-8771395 MsG0280006968.01.T01:CDS
CCTTATGGAATTGACTTTCC+TGG 0.310132 2:-8771380 MsG0280006968.01.T01:CDS
CTCCAAAATAATTTACCAAT+TGG 0.315553 2:+8770503 None:intergenic
GGAGACTCTTTGGTGGATAA+TGG 0.317349 2:-8771446 MsG0280006968.01.T01:CDS
GCTACACATGTTCTACCATC+TGG 0.337001 2:+8770044 None:intergenic
AGCAAGTGCATTTATACAAT+TGG 0.341319 2:-8770454 MsG0280006968.01.T01:CDS
GACTTTCCTGGCGGACCAAC+TGG 0.344384 2:-8771368 MsG0280006968.01.T01:CDS
ACCTCTCTATGATTAATATA+GGG 0.359317 2:-8771541 MsG0280006968.01.T01:CDS
TTCAAATGACAATACATTAT+AGG 0.369620 2:+8769484 None:intergenic
TTGAGTTTGTGGAGTGGAAT+TGG 0.370240 2:-8771503 MsG0280006968.01.T01:CDS
GACCTCTCTATGATTAATAT+AGG 0.379454 2:-8771542 MsG0280006968.01.T01:CDS
TTATTTGGAGTTGGTCAAAT+AGG 0.381637 2:-8770098 MsG0280006968.01.T01:CDS
GCTAAACGATTAATATCAAT+AGG 0.383756 2:+8769593 None:intergenic
AAATTTAACAGCTGAGCAAT+TGG 0.383884 2:-8770792 MsG0280006968.01.T01:intron
GTGCATTTATACAATTGGAT+TGG 0.387852 2:-8770449 MsG0280006968.01.T01:CDS
TAGGCATGAAATAATTGTTA+AGG 0.404750 2:+8770413 None:intergenic
ACTTGGACTTGTTGCACAAA+AGG 0.405032 2:+8769427 None:intergenic
TGCATTTATACAATTGGATT+GGG 0.411957 2:-8770448 MsG0280006968.01.T01:CDS
TCCAAAATAATTTACCAATT+GGG 0.418563 2:+8770504 None:intergenic
AATTTAACAGCTGAGCAATT+GGG 0.419050 2:-8770791 MsG0280006968.01.T01:intron
CCAATTGGGACACTGTCCTT+TGG 0.421179 2:+8770518 None:intergenic
AGAAGAAACTGGACAACAAT+TGG 0.429608 2:-8770678 MsG0280006968.01.T01:intron
AACCTTCCAGTTGGTCCGCC+AGG 0.439561 2:+8771362 None:intergenic
GCTGGAATCAGAGAAGAAAC+TGG 0.443343 2:-8770689 MsG0280006968.01.T01:CDS
GCCCTTTCAACCTGCATGTA+GGG 0.443708 2:-8769720 MsG0280006968.01.T01:CDS
TGACTCCTCTGAGTATTTGT+CGG 0.445631 2:+8770729 None:intergenic
GCTGAGCAATTGGGGTTCAA+TGG 0.449798 2:-8770782 MsG0280006968.01.T01:CDS
AATTATGCTTCAGCAGCTGC+TGG 0.456416 2:-8770707 MsG0280006968.01.T01:CDS
GCATTTCATCCAACTGAAGC+TGG 0.464411 2:-8769671 MsG0280006968.01.T01:CDS
ACATAGATGAATCTTGCATC+AGG 0.464951 2:+8769948 None:intergenic
CTACTGGTAGAATAGATTGT+AGG 0.474873 2:+8770394 None:intergenic
AAGCATATGCTCAGCAACTC+AGG 0.475429 2:-8770333 MsG0280006968.01.T01:CDS
AAATAATTACCATAGGATGA+TGG 0.485604 2:+8769888 None:intergenic
ATCCCTACATGCAGGTTGAA+AGG 0.488239 2:+8769718 None:intergenic
TCCCTACATGCAGGTTGAAA+GGG 0.491272 2:+8769719 None:intergenic
AATAATTACCATAGGATGAT+GGG 0.493093 2:+8769889 None:intergenic
TAATATAGGGATAGTAGTGT+TGG 0.495285 2:-8771528 MsG0280006968.01.T01:CDS
ACACTATTTCCAGCTTCAGT+TGG 0.498634 2:+8769662 None:intergenic
TGAATCTTGCATCAGGAAGT+TGG 0.499393 2:+8769955 None:intergenic
TTGTGGTGTGAATTGTCTAC+TGG 0.500639 2:+8770378 None:intergenic
TGTCATTTGAATGCGTCTAA+AGG 0.501185 2:-8769472 MsG0280006968.01.T01:three_prime_UTR
CCAAAGGACAGTGTCCCAAT+TGG 0.502815 2:-8770518 MsG0280006968.01.T01:CDS
AAAATGGCGTTATTTGGAGT+TGG 0.505537 2:-8770107 MsG0280006968.01.T01:CDS
CTACACATGTTCTACCATCT+GGG 0.517651 2:+8770045 None:intergenic
GCAAATCAATTATTCAACAA+TGG 0.525590 2:-8770008 MsG0280006968.01.T01:CDS
TGCCCTTTCAACCTGCATGT+AGG 0.528510 2:-8769721 MsG0280006968.01.T01:CDS
CCAGGAAAGTCAATTCCATA+AGG 0.532610 2:+8771380 None:intergenic
AAAACCACTGTTGATGTCAT+TGG 0.535324 2:-8771329 MsG0280006968.01.T01:intron
ACATTATAGGACAATAATAG+TGG 0.536719 2:+8769497 None:intergenic
CTAAACGATTAATATCAATA+GGG 0.537755 2:+8769594 None:intergenic
ATTTAACAGCTGAGCAATTG+GGG 0.548458 2:-8770790 MsG0280006968.01.T01:intron
CTGCATGTAGGGATAGGAAT+GGG 0.549161 2:-8769709 MsG0280006968.01.T01:CDS
AAAGACAAATTACGTACACT+TGG 0.562736 2:+8769410 None:intergenic
ATAACCAGCCCATCATCCTA+TGG 0.566345 2:-8769897 MsG0280006968.01.T01:intron
GCTGAGCATATGCTTGAAGA+AGG 0.570230 2:+8770341 None:intergenic
CCGTTGGAAAACCTTCCAGT+TGG 0.572941 2:+8771353 None:intergenic
TTGGCTCAAAACAGCCCAGA+TGG 0.578429 2:-8770059 MsG0280006968.01.T01:CDS
TTCCTGGCGGACCAACTGGA+AGG 0.581746 2:-8771364 MsG0280006968.01.T01:CDS
CCTGCATGTAGGGATAGGAA+TGG 0.583234 2:-8769710 MsG0280006968.01.T01:CDS
TTCAACCTGCATGTAGGGAT+AGG 0.585091 2:-8769715 MsG0280006968.01.T01:CDS
ATTACCATAGGATGATGGGC+TGG 0.593277 2:+8769893 None:intergenic
CCTTCCTATGCATCAGCTAG+AGG 0.593466 2:-8770752 MsG0280006968.01.T01:CDS
AATGCTGGATGCTGTGGTGT+AGG 0.601465 2:-8769770 MsG0280006968.01.T01:CDS
CCATTCCTATCCCTACATGC+AGG 0.604308 2:+8769710 None:intergenic
AGCATATGCTCAGCAACTCA+GGG 0.609775 2:-8770332 MsG0280006968.01.T01:intron
AGGACATTAGCATATTGTTG+TGG 0.611755 2:+8770361 None:intergenic
AGGTTGCACCCCAAATGCAT+TGG 0.618893 2:-8770078 MsG0280006968.01.T01:CDS
TCGGCCTCTAGCTGATGCAT+AGG 0.621799 2:+8770748 None:intergenic
TCCCTATATTAATCATAGAG+AGG 0.629627 2:+8771540 None:intergenic
CCTCTAGCTGATGCATAGGA+AGG 0.633798 2:+8770752 None:intergenic
GGCAAGTGCAAAATTACCAA+AGG 0.635259 2:-8770534 MsG0280006968.01.T01:CDS
GTTACAAATGCTGGATGCTG+TGG 0.642532 2:-8769776 MsG0280006968.01.T01:CDS
AGAGGCCGACAAATACTCAG+AGG 0.665360 2:-8770734 MsG0280006968.01.T01:CDS
TATGGAATTGACTTTCCTGG+CGG 0.683663 2:-8771377 MsG0280006968.01.T01:CDS
CTCACCAATGACATCAACAG+TGG 0.697219 2:+8771325 None:intergenic
TGTGGTGTAGGAAGAAACAA+TGG 0.764473 2:-8769758 MsG0280006968.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTAATAAGTTTTTTTTTTTA+AGG - Chr2:8771369-8771388 MsG0280006968.01.T01:CDS 10.0%
!!! TGTGAATTTAAATTATTTTA+GGG + Chr2:8771055-8771074 None:intergenic 10.0%
!!! TTGTGAATTTAAATTATTTT+AGG + Chr2:8771056-8771075 None:intergenic 10.0%
!!! ATATGCATTATATTTAAGTT+AGG - Chr2:8770619-8770638 MsG0280006968.01.T01:intron 15.0%
!!! ATTATCTTTTTTCTTCATTT+GGG - Chr2:8770293-8770312 MsG0280006968.01.T01:intron 15.0%
!!! ATTCAGATTTTATACAATTA+TGG - Chr2:8770777-8770796 MsG0280006968.01.T01:CDS 15.0%
!!! ATTTTGTTATTCAATAGTTT+AGG - Chr2:8769748-8769767 MsG0280006968.01.T01:CDS 15.0%
!!! TATAAGAATATTTTGAATCT+TGG - Chr2:8769930-8769949 MsG0280006968.01.T01:CDS 15.0%
!!! TTCAGATTTTATACAATTAT+GGG - Chr2:8770778-8770797 MsG0280006968.01.T01:CDS 15.0%
!! CTAAACGATTAATATCAATA+GGG + Chr2:8771323-8771342 None:intergenic 20.0%
!! GTTATAATGAATTGATCTAA+CGG - Chr2:8770677-8770696 MsG0280006968.01.T01:intron 20.0%
!! TCCAAAATAATTTACCAATT+GGG + Chr2:8770413-8770432 None:intergenic 20.0%
!! TTCAAATGACAATACATTAT+AGG + Chr2:8771433-8771452 None:intergenic 20.0%
!! TTCATCTATGTAAATGTTTA+TGG - Chr2:8770978-8770997 MsG0280006968.01.T01:intron 20.0%
!!! AAAATTGATCCTTATTTTGT+AGG - Chr2:8770336-8770355 MsG0280006968.01.T01:CDS 20.0%
!!! AAATTGATCCTTATTTTGTA+GGG - Chr2:8770337-8770356 MsG0280006968.01.T01:CDS 20.0%
!!! AGTTTTTTTTTTTAAGGTAG+TGG - Chr2:8771375-8771394 MsG0280006968.01.T01:CDS 20.0%
!!! GATTATCTTTTTTCTTCATT+TGG - Chr2:8770292-8770311 MsG0280006968.01.T01:intron 20.0%
!!! TACAAAATAAGGATCAATTT+TGG + Chr2:8770337-8770356 None:intergenic 20.0%
!!! TCAGATTTTATACAATTATG+GGG - Chr2:8770779-8770798 MsG0280006968.01.T01:CDS 20.0%
!!! TTTCTTTCTTTCTAATTTTC+AGG - Chr2:8771108-8771127 MsG0280006968.01.T01:intron 20.0%
! AAAGCTAATTACTTACCTTA+TGG - Chr2:8769519-8769538 MsG0280006968.01.T01:three_prime_UTR 25.0%
! AAATAATTACCATAGGATGA+TGG + Chr2:8771029-8771048 None:intergenic 25.0%
! AATAATTACCATAGGATGAT+GGG + Chr2:8771028-8771047 None:intergenic 25.0%
! ACATTATAGGACAATAATAG+TGG + Chr2:8771420-8771439 None:intergenic 25.0%
! ACCTCTCTATGATTAATATA+GGG - Chr2:8769373-8769392 MsG0280006968.01.T01:three_prime_UTR 25.0%
! ATGTTTGCAGTTGTATTTAA+TGG - Chr2:8771542-8771561 MsG0280006968.01.T01:CDS 25.0%
! CTCCAAAATAATTTACCAAT+TGG + Chr2:8770414-8770433 None:intergenic 25.0%
! GCAAATCAATTATTCAACAA+TGG - Chr2:8770906-8770925 MsG0280006968.01.T01:intron 25.0%
! GCTAAACGATTAATATCAAT+AGG + Chr2:8771324-8771343 None:intergenic 25.0%
! TACTCTTGTCTAACATTTAA+TGG - Chr2:8770099-8770118 MsG0280006968.01.T01:CDS 25.0%
! TAGGCATGAAATAATTGTTA+AGG + Chr2:8770504-8770523 None:intergenic 25.0%
! TCTCCAAAAATAAAATAGCA+AGG + Chr2:8769453-8769472 None:intergenic 25.0%
! TGCATTTATACAATTGGATT+GGG - Chr2:8770466-8770485 MsG0280006968.01.T01:CDS 25.0%
!! TCCCAATTGGTAAATTATTT+TGG - Chr2:8770409-8770428 MsG0280006968.01.T01:CDS 25.0%
!!! AATTTTGGAAAATAAGCATG+TGG + Chr2:8770322-8770341 None:intergenic 25.0%
!!! GTACCTTGCTATTTTATTTT+TGG - Chr2:8769447-8769466 MsG0280006968.01.T01:three_prime_UTR 25.0%
!!! TTTTATTTTTGGAGACTCTT+TGG - Chr2:8769458-8769477 MsG0280006968.01.T01:three_prime_UTR 25.0%
AAAGACAAATTACGTACACT+TGG + Chr2:8771507-8771526 None:intergenic 30.0%
AAATTTAACAGCTGAGCAAT+TGG - Chr2:8770122-8770141 MsG0280006968.01.T01:CDS 30.0%
AATTTAACAGCTGAGCAATT+GGG - Chr2:8770123-8770142 MsG0280006968.01.T01:CDS 30.0%
ACATTGCATTCTTATTAGCT+AGG - Chr2:8769690-8769709 MsG0280006968.01.T01:CDS 30.0%
AGCAAGTGCATTTATACAAT+TGG - Chr2:8770460-8770479 MsG0280006968.01.T01:CDS 30.0%
AGGGAGAAAATAATTACCAT+AGG + Chr2:8771036-8771055 None:intergenic 30.0%
ATTGATATTTGATGTAACCC+TGG + Chr2:8770656-8770675 None:intergenic 30.0%
GACCTCTCTATGATTAATAT+AGG - Chr2:8769372-8769391 MsG0280006968.01.T01:three_prime_UTR 30.0%
GTGCATTTATACAATTGGAT+TGG - Chr2:8770465-8770484 MsG0280006968.01.T01:CDS 30.0%
TAATATAGGGATAGTAGTGT+TGG - Chr2:8769386-8769405 MsG0280006968.01.T01:three_prime_UTR 30.0%
TCCCTATATTAATCATAGAG+AGG + Chr2:8769377-8769396 None:intergenic 30.0%
! TTATTTGGAGTTGGTCAAAT+AGG - Chr2:8770816-8770835 MsG0280006968.01.T01:intron 30.0%
! TTTTATACAATTATGGGGCA+AGG - Chr2:8770784-8770803 MsG0280006968.01.T01:CDS 30.0%
!! ATAGGAATGGGTTCTTATTT+TGG - Chr2:8771217-8771236 MsG0280006968.01.T01:intron 30.0%
!!! GACAACGAATTAGTTTTAGA+GGG - Chr2:8770359-8770378 MsG0280006968.01.T01:CDS 30.0%
!!! TAGGAATGGGTTCTTATTTT+GGG - Chr2:8771218-8771237 MsG0280006968.01.T01:intron 30.0%
AAAACCACTGTTGATGTCAT+TGG - Chr2:8769585-8769604 MsG0280006968.01.T01:CDS 35.0%
AATTACTTGCATGCATACAG+AGG + Chr2:8770070-8770089 None:intergenic 35.0%
ACATAGATGAATCTTGCATC+AGG + Chr2:8770969-8770988 None:intergenic 35.0%
ACTAGAGTACGTAATACTGA+TGG + Chr2:8769988-8770007 None:intergenic 35.0%
AGAAGAAACTGGACAACAAT+TGG - Chr2:8770236-8770255 MsG0280006968.01.T01:intron 35.0%
AGGACATTAGCATATTGTTG+TGG + Chr2:8770556-8770575 None:intergenic 35.0%
AGTTAGGATCTATTAACACC+AGG - Chr2:8770635-8770654 MsG0280006968.01.T01:intron 35.0%
ATTTAACAGCTGAGCAATTG+GGG - Chr2:8770124-8770143 MsG0280006968.01.T01:CDS 35.0%
CTACTGGTAGAATAGATTGT+AGG + Chr2:8770523-8770542 None:intergenic 35.0%
GAAGCTGGAAATAGTGTTAT+TGG - Chr2:8771258-8771277 MsG0280006968.01.T01:intron 35.0%
GTTAGGATCTATTAACACCA+GGG - Chr2:8770636-8770655 MsG0280006968.01.T01:intron 35.0%
TTCGTTGTCCCTACAAAATA+AGG + Chr2:8770348-8770367 None:intergenic 35.0%
! AAAATGGCGTTATTTGGAGT+TGG - Chr2:8770807-8770826 MsG0280006968.01.T01:intron 35.0%
! GTTATGATATCGTTTGCTAC+AGG - Chr2:8769712-8769731 MsG0280006968.01.T01:CDS 35.0%
! TGTCATTTGAATGCGTCTAA+AGG - Chr2:8771442-8771461 MsG0280006968.01.T01:CDS 35.0%
!! CTTTTGCTATAGAAGTGAGT+TGG + Chr2:8769503-8769522 None:intergenic 35.0%
!! TGTTTTGAGCCAATGCATTT+GGG + Chr2:8770848-8770867 None:intergenic 35.0%
!!! CGATGAGAAGTTGTTTTGAA+TGG + Chr2:8769810-8769829 None:intergenic 35.0%
!!! GGACAACGAATTAGTTTTAG+AGG - Chr2:8770358-8770377 MsG0280006968.01.T01:CDS 35.0%
!!! GGTTTTAGAGTTACAAATGC+TGG - Chr2:8771129-8771148 MsG0280006968.01.T01:intron 35.0%
!!! TAGTGTTGGTTTTGAGTTTG+TGG - Chr2:8769400-8769419 MsG0280006968.01.T01:three_prime_UTR 35.0%
!!! TATTTTTGGAGACTCTTTGG+TGG - Chr2:8769461-8769480 MsG0280006968.01.T01:three_prime_UTR 35.0%
ACACTATTTCCAGCTTCAGT+TGG + Chr2:8771255-8771274 None:intergenic 40.0%
CAATTATGGGGCAAGGAAAA+TGG - Chr2:8770791-8770810 MsG0280006968.01.T01:intron 40.0%
CCAGGAAAGTCAATTCCATA+AGG + Chr2:8769537-8769556 None:intergenic 40.0%
CTACACATGTTCTACCATCT+GGG + Chr2:8770872-8770891 None:intergenic 40.0%
GCAAGGAAAATGGCGTTATT+TGG - Chr2:8770801-8770820 MsG0280006968.01.T01:intron 40.0%
GGCAAGTGCAAAATTACCAA+AGG - Chr2:8770380-8770399 MsG0280006968.01.T01:CDS 40.0%
TGAATCTTGCATCAGGAAGT+TGG + Chr2:8770962-8770981 None:intergenic 40.0%
TGACTCCTCTGAGTATTTGT+CGG + Chr2:8770188-8770207 None:intergenic 40.0%
TGTGGTGTAGGAAGAAACAA+TGG - Chr2:8771156-8771175 MsG0280006968.01.T01:intron 40.0%
TTGAGTTTGTGGAGTGGAAT+TGG - Chr2:8769411-8769430 MsG0280006968.01.T01:three_prime_UTR 40.0%
TTGTGGTGTGAATTGTCTAC+TGG + Chr2:8770539-8770558 None:intergenic 40.0%
! CCTTATGGAATTGACTTTCC+TGG - Chr2:8769534-8769553 MsG0280006968.01.T01:three_prime_UTR 40.0%
! TATGGAATTGACTTTCCTGG+CGG - Chr2:8769537-8769556 MsG0280006968.01.T01:three_prime_UTR 40.0%
!! ACTTGGACTTGTTGCACAAA+AGG + Chr2:8771490-8771509 None:intergenic 40.0%
!! CTGTTTTGAGCCAATGCATT+TGG + Chr2:8770849-8770868 None:intergenic 40.0%
!! GTTTTGAGCCAATGCATTTG+GGG + Chr2:8770847-8770866 None:intergenic 40.0%
!!! TTGGTTTTGAGTTTGTGGAG+TGG - Chr2:8769405-8769424 MsG0280006968.01.T01:three_prime_UTR 40.0%
AAGCATATGCTCAGCAACTC+AGG - Chr2:8770581-8770600 MsG0280006968.01.T01:intron 45.0%
AATTATGCTTCAGCAGCTGC+TGG - Chr2:8770207-8770226 MsG0280006968.01.T01:intron 45.0%
AGCATATGCTCAGCAACTCA+GGG - Chr2:8770582-8770601 MsG0280006968.01.T01:intron 45.0%
ATAACCAGCCCATCATCCTA+TGG - Chr2:8771017-8771036 MsG0280006968.01.T01:intron 45.0%
CTCACCAATGACATCAACAG+TGG + Chr2:8769592-8769611 None:intergenic 45.0%
CTGCATGTAGGGATAGGAAT+GGG - Chr2:8771205-8771224 MsG0280006968.01.T01:intron 45.0%
GCATTTCATCCAACTGAAGC+TGG - Chr2:8771243-8771262 MsG0280006968.01.T01:intron 45.0%
GCTACACATGTTCTACCATC+TGG + Chr2:8770873-8770892 None:intergenic 45.0%
GCTGAGCATATGCTTGAAGA+AGG + Chr2:8770576-8770595 None:intergenic 45.0%
GCTGGAATCAGAGAAGAAAC+TGG - Chr2:8770225-8770244 MsG0280006968.01.T01:intron 45.0%
GTTACAAATGCTGGATGCTG+TGG - Chr2:8771138-8771157 MsG0280006968.01.T01:intron 45.0%
TTCAACCTGCATGTAGGGAT+AGG - Chr2:8771199-8771218 MsG0280006968.01.T01:intron 45.0%
! ATCCCTACATGCAGGTTGAA+AGG + Chr2:8771199-8771218 None:intergenic 45.0%
! CCAACTGGAAGGTTTTCCAA+CGG - Chr2:8769561-8769580 MsG0280006968.01.T01:three_prime_UTR 45.0%
! GGAGACTCTTTGGTGGATAA+TGG - Chr2:8769468-8769487 MsG0280006968.01.T01:three_prime_UTR 45.0%
! TCCCTACATGCAGGTTGAAA+GGG + Chr2:8771198-8771217 None:intergenic 45.0%
!! ATCAACAGTGGTTTTGCCGT+TGG + Chr2:8769580-8769599 None:intergenic 45.0%
!! ATTACCATAGGATGATGGGC+TGG + Chr2:8771024-8771043 None:intergenic 45.0%
AATGCTGGATGCTGTGGTGT+AGG - Chr2:8771144-8771163 MsG0280006968.01.T01:intron 50.0%
AGAGGCCGACAAATACTCAG+AGG - Chr2:8770180-8770199 MsG0280006968.01.T01:intron 50.0%
AGGTTGCACCCCAAATGCAT+TGG - Chr2:8770836-8770855 MsG0280006968.01.T01:intron 50.0%
CCAAAGGACAGTGTCCCAAT+TGG - Chr2:8770396-8770415 MsG0280006968.01.T01:CDS 50.0%
CCAATTGGGACACTGTCCTT+TGG + Chr2:8770399-8770418 None:intergenic 50.0%
CCATTCCTATCCCTACATGC+AGG + Chr2:8771207-8771226 None:intergenic 50.0%
CCGTTGGAAAACCTTCCAGT+TGG + Chr2:8769564-8769583 None:intergenic 50.0%
CCTCTAGCTGATGCATAGGA+AGG + Chr2:8770165-8770184 None:intergenic 50.0%
CCTGCATGTAGGGATAGGAA+TGG - Chr2:8771204-8771223 MsG0280006968.01.T01:intron 50.0%
CCTTCCTATGCATCAGCTAG+AGG - Chr2:8770162-8770181 MsG0280006968.01.T01:intron 50.0%
GCCCTTTCAACCTGCATGTA+GGG - Chr2:8771194-8771213 MsG0280006968.01.T01:intron 50.0%
GCTGAGCAATTGGGGTTCAA+TGG - Chr2:8770132-8770151 MsG0280006968.01.T01:CDS 50.0%
TGCCCTTTCAACCTGCATGT+AGG - Chr2:8771193-8771212 MsG0280006968.01.T01:intron 50.0%
TTGGCTCAAAACAGCCCAGA+TGG - Chr2:8770855-8770874 MsG0280006968.01.T01:intron 50.0%
TCGGCCTCTAGCTGATGCAT+AGG + Chr2:8770169-8770188 None:intergenic 55.0%
AACCTTCCAGTTGGTCCGCC+AGG + Chr2:8769555-8769574 None:intergenic 60.0%
! GACTTTCCTGGCGGACCAAC+TGG - Chr2:8769546-8769565 MsG0280006968.01.T01:three_prime_UTR 60.0%
! TTCCTGGCGGACCAACTGGA+AGG - Chr2:8769550-8769569 MsG0280006968.01.T01:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 8769360 8771576 8769360 ID=MsG0280006968.01;Name=MsG0280006968.01
Chr2 mRNA 8769360 8771576 8769360 ID=MsG0280006968.01.T01;Parent=MsG0280006968.01;Name=MsG0280006968.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0.5|0.4|1|1|1|5|223|365
Chr2 exon 8769360 8769806 8769360 ID=MsG0280006968.01.T01:exon:2539;Parent=MsG0280006968.01.T01
Chr2 exon 8769898 8770153 8769898 ID=MsG0280006968.01.T01:exon:2538;Parent=MsG0280006968.01.T01
Chr2 exon 8770333 8770578 8770333 ID=MsG0280006968.01.T01:exon:2537;Parent=MsG0280006968.01.T01
Chr2 exon 8770679 8770803 8770679 ID=MsG0280006968.01.T01:exon:2536;Parent=MsG0280006968.01.T01
Chr2 exon 8771330 8771576 8771330 ID=MsG0280006968.01.T01:exon:2535;Parent=MsG0280006968.01.T01
Chr2 CDS 8771330 8771576 8771330 ID=MsG0280006968.01.T01:cds;Parent=MsG0280006968.01.T01
Chr2 CDS 8770679 8770803 8770679 ID=MsG0280006968.01.T01:cds;Parent=MsG0280006968.01.T01
Chr2 CDS 8770333 8770578 8770333 ID=MsG0280006968.01.T01:cds;Parent=MsG0280006968.01.T01
Chr2 CDS 8769898 8770153 8769898 ID=MsG0280006968.01.T01:cds;Parent=MsG0280006968.01.T01
Chr2 CDS 8769583 8769806 8769583 ID=MsG0280006968.01.T01:cds;Parent=MsG0280006968.01.T01
Chr2 three_prime_UTR 8769360 8769582 8769360 ID=MsG0280006968.01.T01:three_prime_utr;Parent=MsG0280006968.01.T01
Gene Sequence

>MsG0280006968.01.T01

ATGGCATTTTGGGACCTCTCTATGATTAATATAGGGATAGTAGTGTTGGTTTTGAGTTTGTGGAGTGGAATTGGAGTAGCACAACAAGTACCTTGCTATTTTATTTTTGGAGACTCTTTGGTGGATAATGGTAACAACAACCAACTCACTTCTATAGCAAAAGCTAATTACTTACCTTATGGAATTGACTTTCCTGGCGGACCAACTGGAAGGTTTTCCAACGGCAAAACCACTGTTGATGTCATTGCTGAGCAATTGGGGTTCAATGGTTATATACCTTCCTATGCATCAGCTAGAGGCCGACAAATACTCAGAGGAGTCAATTATGCTTCAGCAGCTGCTGGAATCAGAGAAGAAACTGGACAACAATTGGGACAACGAATTAGTTTTAGAGGGCAAGTGCAAAATTACCAAAGGACAGTGTCCCAATTGGTAAATTATTTTGGAGATGAGAACACTGCTGCAAATTATCTTAGCAAGTGCATTTATACAATTGGATTGGGTAGCAATGATTACCTTAACAATTATTTCATGCCTACAATCTATTCTACCAGTAGACAATTCACACCACAACAATATGCTAATGTCCTTCTTCAAGCATATGCTCAGCAACTCAGGATTTTATACAATTATGGGGCAAGGAAAATGGCGTTATTTGGAGTTGGTCAAATAGGTTGCACCCCAAATGCATTGGCTCAAAACAGCCCAGATGGTAGAACATGTGTAGCAAGAATCAATTCTGCAAATCAATTATTCAACAATGGATTAAGATCTCTTGTTGATCAACTCAATAACCAACTTCCTGATGCAAGATTCATCTATGTAAATGTTTATGGTATCTTTCAAGACATCATAACCAGCCCATCATCCTATGGTTTTAGAGTTACAAATGCTGGATGCTGTGGTGTAGGAAGAAACAATGGTCAAATTACATGTTTGCCCTTTCAACCTGCATGTAGGGATAGGAATGGGTTCTTATTTTGGGATGCATTTCATCCAACTGAAGCTGGAAATAGTGTTATTGGTAGAAGAGCTTACAATGCTCAATCTGCATCAGATGCTTACCCTATTGATATTAATCGTTTAGCTCAAATCTAA
Protein sequence

>MsG0280006968.01.T01

MAFWDLSMINIGIVVLVLSLWSGIGVAQQVPCYFIFGDSLVDNGNNNQLTSIAKANYLPYGIDFPGGPTGRFSNGKTTVDVIAEQLGFNGYIPSYASARGRQILRGVNYASAAAGIREETGQQLGQRISFRGQVQNYQRTVSQLVNYFGDENTAANYLSKCIYTIGLGSNDYLNNYFMPTIYSTSRQFTPQQYANVLLQAYAQQLRILYNYGARKMALFGVGQIGCTPNALAQNSPDGRTCVARINSANQLFNNGLRSLVDQLNNQLPDARFIYVNVYGIFQDIITSPSSYGFRVTNAGCCGVGRNNGQITCLPFQPACRDRNGFLFWDAFHPTEAGNSVIGRRAYNAQSASDAYPIDINRLAQI*