AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038807.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038807.01.T01 MTR_7g062470 93.130 131 6 1 1 128 1 131 3.79e-71 209
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038807.01.T01 AT5G02160 70.085 117 34 1 13 128 12 128 2.81e-48 151

Find 51 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAATATTTCAACGTGTTT+TGG 0.219046 7:-53321626 MsG0780038807.01.T01:three_prime_UTR
CTCACTTTCTTCACTTTGTT+TGG 0.220105 7:-53323414 MsG0780038807.01.T01:five_prime_UTR
TATCTTGTTGCTGGTGCTAT+TGG 0.295597 7:-53323199 MsG0780038807.01.T01:CDS
TATATAATCTAAACTGTATA+AGG 0.298080 7:-53321572 MsG0780038807.01.T01:three_prime_UTR
GGTACTATTTATCTTGTTGC+TGG 0.311613 7:-53323208 MsG0780038807.01.T01:CDS
GTGATGGAGCAGGGTTTGTT+AGG 0.314720 7:-53321827 MsG0780038807.01.T01:CDS
AACAACACTAAACACTCATT+TGG 0.360925 7:-53323325 MsG0780038807.01.T01:CDS
GCTATTGGAATTGCTCTTGT+TGG 0.368974 7:-53323184 MsG0780038807.01.T01:CDS
AGGGCACGCGAGAAACTTAT+AGG 0.369044 7:+53321665 None:intergenic
AAATGAGTGTTTAGTGTTGT+TGG 0.380196 7:+53323327 None:intergenic
TTGTGCTCGTTGTGATGGTT+TGG 0.405035 7:-53321748 MsG0780038807.01.T01:CDS
AAGGCGCGTGAGAAATTTAT+AGG 0.405152 7:-53321553 MsG0780038807.01.T01:three_prime_UTR
AAGTTTCTCGCGTGCCCTAT+CGG 0.409171 7:-53321660 MsG0780038807.01.T01:three_prime_UTR
AGCATTTCTATTTGTCAACT+TGG 0.409660 7:+53321715 None:intergenic
TCTGTTATTGTTTCAGCAGT+TGG 0.416895 7:-53323247 MsG0780038807.01.T01:CDS
AACCCTGCTCCATCACAATC+AGG 0.417979 7:+53321834 None:intergenic
TTACGGGTGTTTATTCCATT+CGG 0.418845 7:-53321597 MsG0780038807.01.T01:three_prime_UTR
ATTGGGAATGATTGTGTTCA+AGG 0.420585 7:+53323360 None:intergenic
TACATTACATTACCATGAAA+GGG 0.423584 7:+53321502 None:intergenic
GTGATGAACTTCATAATGTA+AGG 0.425525 7:-53321442 MsG0780038807.01.T01:three_prime_UTR
TGTGCTCGTTGTGATGGTTT+GGG 0.434742 7:-53321747 MsG0780038807.01.T01:CDS
TTGTTAAGTTATTGTTGGAT+TGG 0.444122 7:+53323472 None:intergenic
TCTTTACGTGAGAAGATGAT+AGG 0.453999 7:+53323151 None:intergenic
CAGGGTTTGTTAGGAAAGGT+GGG 0.459410 7:-53321818 MsG0780038807.01.T01:CDS
GCAGGGTTTGTTAGGAAAGG+TGG 0.460825 7:-53321819 MsG0780038807.01.T01:CDS
TTACATTACATTACCATGAA+AGG 0.472794 7:+53321501 None:intergenic
GAGAGCAAATGCAGCAAGAA+AGG 0.478276 7:-53321787 MsG0780038807.01.T01:CDS
GTTGTTGGAAATTGTAACAT+TGG 0.483393 7:+53323342 None:intergenic
AACACTAAACACTCATTTGG+AGG 0.505960 7:-53323322 MsG0780038807.01.T01:CDS
GGGCACGCGAGAAACTTATA+GGG 0.509486 7:+53321666 None:intergenic
CTTCATAATGTAAGGAGGGA+AGG 0.511172 7:-53321434 MsG0780038807.01.T01:three_prime_UTR
TGCCCTGATTGTGATGGAGC+AGG 0.517909 7:-53321837 MsG0780038807.01.T01:CDS
TTGTTGGAAATTGTAACATT+GGG 0.522805 7:+53323343 None:intergenic
ATTGTTTGTGCTCGTTGTGA+TGG 0.530028 7:-53321753 MsG0780038807.01.T01:CDS
ACATTACCATGAAAGGGAAA+AGG 0.538811 7:+53321508 None:intergenic
TTCATAATGTAAGGAGGGAA+GGG 0.545642 7:-53321433 MsG0780038807.01.T01:three_prime_UTR
GGAGCAGGGTTTGTTAGGAA+AGG 0.545979 7:-53321822 MsG0780038807.01.T01:CDS
AATGATTGTGTTCAAGGTCA+TGG 0.560862 7:+53323366 None:intergenic
TTATAGGGTGGGAAAAGTAA+TGG 0.563130 7:+53321681 None:intergenic
TTTAGATTATATAATCCGAA+TGG 0.574440 7:+53321582 None:intergenic
GTTGGAGATGTATCTTCTGA+TGG 0.584562 7:-53323229 MsG0780038807.01.T01:CDS
ATGAACTTCATAATGTAAGG+AGG 0.586213 7:-53321439 MsG0780038807.01.T01:three_prime_UTR
GTTACATTGTATTAGAAACA+TGG 0.592738 7:-53323392 MsG0780038807.01.T01:exon
CACGCGAGAAACTTATAGGG+TGG 0.600925 7:+53321669 None:intergenic
ACCCTGCTCCATCACAATCA+GGG 0.608104 7:+53321835 None:intergenic
GCCCTGATTGTGATGGAGCA+GGG 0.608764 7:-53321836 MsG0780038807.01.T01:CDS
ACGCGAGAAACTTATAGGGT+GGG 0.609001 7:+53321670 None:intergenic
TGAACTTCATAATGTAAGGA+GGG 0.625969 7:-53321438 MsG0780038807.01.T01:three_prime_UTR
TTATAGGATGAGAAAAGAAG+CGG 0.647194 7:-53321537 MsG0780038807.01.T01:three_prime_UTR
ATCAGATGCCCTGATTGTGA+TGG 0.647435 7:-53321843 MsG0780038807.01.T01:intron
AGGGTTTGTTAGGAAAGGTG+GGG 0.670666 7:-53321817 MsG0780038807.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATAAATATTTATAT+TGG + Chr7:53322318-53322337 None:intergenic 0.0%
!! AAATTATAAATATTTATATT+GGG + Chr7:53322317-53322336 None:intergenic 0.0%
!! AAAAATAGGTTTATAATTAT+TGG + Chr7:53322743-53322762 None:intergenic 10.0%
!! TAAAAAATAAAATCTGATTT+CGG - Chr7:53322142-53322161 MsG0780038807.01.T01:intron 10.0%
!! AATAATAATCTCAATAATAG+TGG - Chr7:53322342-53322361 MsG0780038807.01.T01:intron 15.0%
!! TATATAATCTAAACTGTATA+AGG - Chr7:53323218-53323237 MsG0780038807.01.T01:CDS 15.0%
!!! TAATTATAAACCTATTTTTG+TGG - Chr7:53322744-53322763 MsG0780038807.01.T01:intron 15.0%
!!! TTTTTTTGTTAAGTTATTGT+TGG + Chr7:53321326-53321345 None:intergenic 15.0%
!! AATCTTAAAACCACAAAAAT+AGG + Chr7:53322757-53322776 None:intergenic 20.0%
!! TTTAGATTATATAATCCGAA+TGG + Chr7:53323211-53323230 None:intergenic 20.0%
!!! AAATTTTGTATAGGCATTTT+TGG - Chr7:53321873-53321892 MsG0780038807.01.T01:intron 20.0%
!!! AATAGAAATGCTTTTTCTTT+TGG - Chr7:53323086-53323105 MsG0780038807.01.T01:intron 20.0%
!!! ATATTATGCTTTTTGATAAG+AGG - Chr7:53321765-53321784 MsG0780038807.01.T01:CDS 20.0%
!!! TTCTAAGAGAAATTTTGTAT+AGG - Chr7:53321864-53321883 MsG0780038807.01.T01:intron 20.0%
!!! TTTTTTCATTGATTCTTGTT+TGG - Chr7:53322846-53322865 MsG0780038807.01.T01:intron 20.0%
! ACATCATTAACAAACAACAA+AGG + Chr7:53322910-53322929 None:intergenic 25.0%
! GGTAAAACTATACTTATCTA+TGG + Chr7:53322076-53322095 None:intergenic 25.0%
! GTTACATTGTATTAGAAACA+TGG - Chr7:53321398-53321417 MsG0780038807.01.T01:three_prime_UTR 25.0%
! TACATTACATTACCATGAAA+GGG + Chr7:53323291-53323310 None:intergenic 25.0%
! TGCACTTGAAATAAAAATCT+AGG + Chr7:53322822-53322841 None:intergenic 25.0%
! TTACATTACATTACCATGAA+AGG + Chr7:53323292-53323311 None:intergenic 25.0%
! TTGTTAAGTTATTGTTGGAT+TGG + Chr7:53321321-53321340 None:intergenic 25.0%
! TTGTTGGAAATTGTAACATT+GGG + Chr7:53321450-53321469 None:intergenic 25.0%
!! ATTCTGAGAAAATTAGAGAT+AGG + Chr7:53321960-53321979 None:intergenic 25.0%
!! TCAGATTTTTAAATCCGATA+GGG + Chr7:53323147-53323166 None:intergenic 25.0%
!! TGAAATATTTCAACGTGTTT+TGG - Chr7:53323164-53323183 MsG0780038807.01.T01:CDS 25.0%
!! TTCAGATTTTTAAATCCGAT+AGG + Chr7:53323148-53323167 None:intergenic 25.0%
!!! AAGAGAATTGTTTTTTTTCG+TGG + Chr7:53322284-53322303 None:intergenic 25.0%
!!! ACCTAGTTTTTTAATCTACT+TGG - Chr7:53322785-53322804 MsG0780038807.01.T01:intron 25.0%
!!! CATCGTTATTTTCATTTTCA+TGG - Chr7:53321676-53321695 MsG0780038807.01.T01:three_prime_UTR 25.0%
!!! CCTAGTTTTTTAATCTACTT+GGG - Chr7:53322786-53322805 MsG0780038807.01.T01:intron 25.0%
!!! TAAGTATAGTTTTACCTTGA+CGG - Chr7:53322080-53322099 MsG0780038807.01.T01:intron 25.0%
AAATGAGTGTTTAGTGTTGT+TGG + Chr7:53321466-53321485 None:intergenic 30.0%
AACAACACTAAACACTCATT+TGG - Chr7:53321465-53321484 MsG0780038807.01.T01:three_prime_UTR 30.0%
AGCATTTCTATTTGTCAACT+TGG + Chr7:53323078-53323097 None:intergenic 30.0%
ATGAACTTCATAATGTAAGG+AGG - Chr7:53323351-53323370 MsG0780038807.01.T01:CDS 30.0%
CCCAAGTAGATTAAAAAACT+AGG + Chr7:53322789-53322808 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - Chr7:53322236-53322255 MsG0780038807.01.T01:intron 30.0%
GTGATGAACTTCATAATGTA+AGG - Chr7:53323348-53323367 MsG0780038807.01.T01:CDS 30.0%
GTTGTTGGAAATTGTAACAT+TGG + Chr7:53321451-53321470 None:intergenic 30.0%
TCAATAAAAAACATCCGTCA+AGG + Chr7:53322097-53322116 None:intergenic 30.0%
TCAATAATAGTGGTTGAAAC+TGG - Chr7:53322352-53322371 MsG0780038807.01.T01:intron 30.0%
TGAACAAATTACACTTGCAA+TGG - Chr7:53321806-53321825 MsG0780038807.01.T01:CDS 30.0%
TGAACTTCATAATGTAAGGA+GGG - Chr7:53323352-53323371 MsG0780038807.01.T01:CDS 30.0%
TGATAATTGGCAATGATGAT+TGG - Chr7:53322445-53322464 MsG0780038807.01.T01:intron 30.0%
TTAATTGAACTTTGCTCAGT+TGG - Chr7:53322209-53322228 MsG0780038807.01.T01:intron 30.0%
TTATAGGATGAGAAAAGAAG+CGG - Chr7:53323253-53323272 MsG0780038807.01.T01:CDS 30.0%
!! AATATTTCAACGTGTTTTGG+AGG - Chr7:53323167-53323186 MsG0780038807.01.T01:CDS 30.0%
!! TCATTGATTCTTGTTTGGAA+TGG - Chr7:53322851-53322870 MsG0780038807.01.T01:intron 30.0%
!!! GTGGTCATAGTAGTTTTAAA+TGG - Chr7:53322537-53322556 MsG0780038807.01.T01:intron 30.0%
AACACTAAACACTCATTTGG+AGG - Chr7:53321468-53321487 MsG0780038807.01.T01:three_prime_UTR 35.0%
AATGATTGTGTTCAAGGTCA+TGG + Chr7:53321427-53321446 None:intergenic 35.0%
ACAATGATCGGAGTGATAAT+TGG - Chr7:53322432-53322451 MsG0780038807.01.T01:intron 35.0%
ACATTACCATGAAAGGGAAA+AGG + Chr7:53323285-53323304 None:intergenic 35.0%
ATTGGGAATGATTGTGTTCA+AGG + Chr7:53321433-53321452 None:intergenic 35.0%
CTCACTTTCTTCACTTTGTT+TGG - Chr7:53321376-53321395 MsG0780038807.01.T01:three_prime_UTR 35.0%
GGTACTATTTATCTTGTTGC+TGG - Chr7:53321582-53321601 MsG0780038807.01.T01:three_prime_UTR 35.0%
TAATTGGCAATGATGATTGG+CGG - Chr7:53322448-53322467 MsG0780038807.01.T01:intron 35.0%
TCTGTTATTGTTTCAGCAGT+TGG - Chr7:53321543-53321562 MsG0780038807.01.T01:three_prime_UTR 35.0%
TCTTTACGTGAGAAGATGAT+AGG + Chr7:53321642-53321661 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+CGG - Chr7:53322241-53322260 MsG0780038807.01.T01:intron 35.0%
TTACGGGTGTTTATTCCATT+CGG - Chr7:53323193-53323212 MsG0780038807.01.T01:CDS 35.0%
TTAGAGGTGATCTAAGAAGT+TGG - Chr7:53322614-53322633 MsG0780038807.01.T01:intron 35.0%
TTATAGGGTGGGAAAAGTAA+TGG + Chr7:53323112-53323131 None:intergenic 35.0%
TTCATAATGTAAGGAGGGAA+GGG - Chr7:53323357-53323376 MsG0780038807.01.T01:CDS 35.0%
! TCTTTACCTTTTCCCTTTCA+TGG - Chr7:53323276-53323295 MsG0780038807.01.T01:CDS 35.0%
!! GTTTTAAATGGTGATCACAG+TGG - Chr7:53322549-53322568 MsG0780038807.01.T01:intron 35.0%
!!! ACGTGTTTTGGAGGTTTTTA+CGG - Chr7:53323176-53323195 MsG0780038807.01.T01:CDS 35.0%
AAGGCGCGTGAGAAATTTAT+AGG - Chr7:53323237-53323256 MsG0780038807.01.T01:CDS 40.0%
ACGATCAGAATGATGATTGG+TGG - Chr7:53322484-53322503 MsG0780038807.01.T01:intron 40.0%
AGTGGTGATCAGAGTATATG+TGG - Chr7:53322567-53322586 MsG0780038807.01.T01:intron 40.0%
ATTGTTTGTGCTCGTTGTGA+TGG - Chr7:53323037-53323056 MsG0780038807.01.T01:intron 40.0%
CAAACAGTGGCTACAATGAT+CGG - Chr7:53322420-53322439 MsG0780038807.01.T01:intron 40.0%
CATAATATATGCAAGGTCCG+GGG - Chr7:53322243-53322262 MsG0780038807.01.T01:intron 40.0%
CTTCATAATGTAAGGAGGGA+AGG - Chr7:53323356-53323375 MsG0780038807.01.T01:CDS 40.0%
GATCTAAGAAGTTGGAGTGA+TGG - Chr7:53322622-53322641 MsG0780038807.01.T01:intron 40.0%
GCAACGATCAGAATGATGAT+TGG - Chr7:53322481-53322500 MsG0780038807.01.T01:intron 40.0%
GCATAATATATGCAAGGTCC+GGG - Chr7:53322242-53322261 MsG0780038807.01.T01:intron 40.0%
GCTATTGGAATTGCTCTTGT+TGG - Chr7:53321606-53321625 MsG0780038807.01.T01:three_prime_UTR 40.0%
GTTGGAGATGTATCTTCTGA+TGG - Chr7:53321561-53321580 MsG0780038807.01.T01:three_prime_UTR 40.0%
TGGTTGAAACTGGTTGTTGT+TGG - Chr7:53322362-53322381 MsG0780038807.01.T01:intron 40.0%
TTGAACTTTGCTCAGTTGGT+AGG - Chr7:53322213-53322232 MsG0780038807.01.T01:intron 40.0%
! ACGTTTTCATGTTACCACCA+AGG + Chr7:53322710-53322729 None:intergenic 40.0%
! AGAATGATGATTGGTGGACA+AGG - Chr7:53322490-53322509 MsG0780038807.01.T01:intron 40.0%
! GAATGATGATTGGTGGACAA+GGG - Chr7:53322491-53322510 MsG0780038807.01.T01:intron 40.0%
! TGAACTTTGCTCAGTTGGTA+GGG - Chr7:53322214-53322233 MsG0780038807.01.T01:intron 40.0%
! TTGAAACTGGTTGTTGTTGG+AGG - Chr7:53322365-53322384 MsG0780038807.01.T01:intron 40.0%
!! GAGTATATGTGGTGTCATAG+TGG - Chr7:53322578-53322597 MsG0780038807.01.T01:intron 40.0%
!! TATATGTGGTGTCATAGTGG+TGG - Chr7:53322581-53322600 MsG0780038807.01.T01:intron 40.0%
!! TATCTTGTTGCTGGTGCTAT+TGG - Chr7:53321591-53321610 MsG0780038807.01.T01:three_prime_UTR 40.0%
!!! CGTGTTTTGGAGGTTTTTAC+GGG - Chr7:53323177-53323196 MsG0780038807.01.T01:CDS 40.0%
ACGCGAGAAACTTATAGGGT+GGG + Chr7:53323123-53323142 None:intergenic 45.0%
ATCAGATGCCCTGATTGTGA+TGG - Chr7:53322947-53322966 MsG0780038807.01.T01:intron 45.0%
GAGAGCAAATGCAGCAAGAA+AGG - Chr7:53323003-53323022 MsG0780038807.01.T01:intron 45.0%
GAGTGGTGAATAGCAAACAG+TGG - Chr7:53322407-53322426 MsG0780038807.01.T01:intron 45.0%
TGTGCTCGTTGTGATGGTTT+GGG - Chr7:53323043-53323062 MsG0780038807.01.T01:intron 45.0%
TTGTGCTCGTTGTGATGGTT+TGG - Chr7:53323042-53323061 MsG0780038807.01.T01:intron 45.0%
! AAACTGGTTGTTGTTGGAGG+AGG - Chr7:53322368-53322387 MsG0780038807.01.T01:intron 45.0%
! AAGTTGGAGTGATGGTGACT+TGG - Chr7:53322630-53322649 MsG0780038807.01.T01:intron 45.0%
! CTATGACCACTAATCGACTC+CGG + Chr7:53322527-53322546 None:intergenic 45.0%
!! AGGAGGTGTTGGACAACTAT+CGG - Chr7:53322385-53322404 MsG0780038807.01.T01:intron 45.0%
!! AGGGTTTGTTAGGAAAGGTG+GGG - Chr7:53322973-53322992 MsG0780038807.01.T01:intron 45.0%
!! CAGGGTTTGTTAGGAAAGGT+GGG - Chr7:53322972-53322991 MsG0780038807.01.T01:intron 45.0%
!! GTCTTAGTGTTGGTCGTTGA+TGG - Chr7:53322676-53322695 MsG0780038807.01.T01:intron 45.0%
!!! GTTTTTTTTCGTGGTAGCCG+AGG + Chr7:53322275-53322294 None:intergenic 45.0%
AACCCTGCTCCATCACAATC+AGG + Chr7:53322959-53322978 None:intergenic 50.0%
AAGTTTCTCGCGTGCCCTAT+CGG - Chr7:53323130-53323149 MsG0780038807.01.T01:intron 50.0%
ACCCTGCTCCATCACAATCA+GGG + Chr7:53322958-53322977 None:intergenic 50.0%
AGGGCACGCGAGAAACTTAT+AGG + Chr7:53323128-53323147 None:intergenic 50.0%
CACGCGAGAAACTTATAGGG+TGG + Chr7:53323124-53323143 None:intergenic 50.0%
GGGCACGCGAGAAACTTATA+GGG + Chr7:53323127-53323146 None:intergenic 50.0%
GTGTTGGACAACTATCGGAG+TGG - Chr7:53322390-53322409 MsG0780038807.01.T01:intron 50.0%
TGATGGTCATCGATCCTTGG+TGG - Chr7:53322693-53322712 MsG0780038807.01.T01:intron 50.0%
! AATGATGATTGGCGGACAGG+TGG - Chr7:53322456-53322475 MsG0780038807.01.T01:intron 50.0%
! GTGATGGAGCAGGGTTTGTT+AGG - Chr7:53322963-53322982 MsG0780038807.01.T01:intron 50.0%
! GTTGTTGTTGGAGGAGGTGT+TGG - Chr7:53322374-53322393 MsG0780038807.01.T01:intron 50.0%
! TGGTGGACAAGGGATTGCAA+TGG - Chr7:53322501-53322520 MsG0780038807.01.T01:intron 50.0%
!! AGTGATGGTGACTTGGTTGG+TGG - Chr7:53322637-53322656 MsG0780038807.01.T01:intron 50.0%
!! CGTTGATGGTCATCGATCCT+TGG - Chr7:53322690-53322709 MsG0780038807.01.T01:intron 50.0%
!! GCAGGGTTTGTTAGGAAAGG+TGG - Chr7:53322971-53322990 MsG0780038807.01.T01:intron 50.0%
!! GGAGCAGGGTTTGTTAGGAA+AGG - Chr7:53322968-53322987 MsG0780038807.01.T01:intron 50.0%
!! GTTGGTGGTGGTCTTAGTGT+TGG - Chr7:53322666-53322685 MsG0780038807.01.T01:intron 50.0%
!! TGGAGTGATGGTGACTTGGT+TGG - Chr7:53322634-53322653 MsG0780038807.01.T01:intron 50.0%
!! TGTGGTGTCATAGTGGTGGT+TGG - Chr7:53322585-53322604 MsG0780038807.01.T01:intron 50.0%
AAGGTCCGGGGTTCAAACCT+CGG - Chr7:53322255-53322274 MsG0780038807.01.T01:intron 55.0%
CAATGGCCGGAGTCGATTAG+TGG - Chr7:53322518-53322537 MsG0780038807.01.T01:intron 55.0%
GGACAAGGGATTGCAATGGC+CGG - Chr7:53322505-53322524 MsG0780038807.01.T01:intron 55.0%
! GCCCTGATTGTGATGGAGCA+GGG - Chr7:53322954-53322973 MsG0780038807.01.T01:intron 55.0%
! GGCAATGATGATTGGCGGAC+AGG - Chr7:53322453-53322472 MsG0780038807.01.T01:intron 55.0%
! GGTGTCATAGTGGTGGTTGG+TGG - Chr7:53322588-53322607 MsG0780038807.01.T01:intron 55.0%
! TGCCCTGATTGTGATGGAGC+AGG - Chr7:53322953-53322972 MsG0780038807.01.T01:intron 55.0%
!! CTTGGTTGGTGGTGAGTGGT+TGG - Chr7:53322648-53322667 MsG0780038807.01.T01:intron 55.0%
!! GTCATAGTGGTGGTTGGTGG+TGG - Chr7:53322591-53322610 MsG0780038807.01.T01:intron 55.0%
!! GTGACTTGGTTGGTGGTGAG+TGG - Chr7:53322644-53322663 MsG0780038807.01.T01:intron 55.0%
!! TGGTGGTTGGTGGTGGTTAG+AGG - Chr7:53322598-53322617 MsG0780038807.01.T01:intron 55.0%
GGTAGCCGAGGTTTGAACCC+CGG + Chr7:53322263-53322282 None:intergenic 60.0%
!! GGTTGGTGGTGAGTGGTTGG+TGG - Chr7:53322651-53322670 MsG0780038807.01.T01:intron 60.0%
!! TGGTGGTGAGTGGTTGGTGG+TGG - Chr7:53322654-53322673 MsG0780038807.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 53321320 53323492 53321320 ID=MsG0780038807.01;Name=MsG0780038807.01
Chr7 mRNA 53321320 53323492 53321320 ID=MsG0780038807.01.T01;Parent=MsG0780038807.01;Name=MsG0780038807.01.T01;_AED=0.30;_eAED=0.30;_QI=97|1|1|1|1|1|2|402|128
Chr7 exon 53321320 53321860 53321320 ID=MsG0780038807.01.T01:exon:9946;Parent=MsG0780038807.01.T01
Chr7 exon 53323148 53323492 53323148 ID=MsG0780038807.01.T01:exon:9945;Parent=MsG0780038807.01.T01
Chr7 five_prime_UTR 53323396 53323492 53323396 ID=MsG0780038807.01.T01:five_prime_utr;Parent=MsG0780038807.01.T01
Chr7 CDS 53323148 53323395 53323148 ID=MsG0780038807.01.T01:cds;Parent=MsG0780038807.01.T01
Chr7 CDS 53321722 53321860 53321722 ID=MsG0780038807.01.T01:cds;Parent=MsG0780038807.01.T01
Chr7 three_prime_UTR 53321320 53321721 53321320 ID=MsG0780038807.01.T01:three_prime_utr;Parent=MsG0780038807.01.T01
Gene Sequence

>MsG0780038807.01.T01

ATGGCATCCATGACCTTGAACACAATCATTCCCAATGTTACAATTTCCAACAACACTAAACACTCATTTGGAGGCTCAACAAATGTGTCATGTAACAAGATTCTTAATAATCAGAAGAGATCTTCATCTGTTATTGTTTCAGCAGTTGGAGATGTATCTTCTGATGGTACTATTTATCTTGTTGCTGGTGCTATTGGAATTGCTCTTGTTGGAACTGCATTTCCTATCATCTTCTCACGTAAAGACACATGCCCTGATTGTGATGGAGCAGGGTTTGTTAGGAAAGGTGGGGTGACATTGAGAGCAAATGCAGCAAGAAAGGATCAAACTCAAATTGTTTGTGCTCGTTGTGATGGTTTGGGAAAACTTAACCAAGTTGACAAATAG

Protein sequence

>MsG0780038807.01.T01

MASMTLNTIIPNVTISNNTKHSFGGSTNVSCNKILNNQKRSSSVIVSAVGDVSSDGTIYLVAGAIGIALVGTAFPIIFSRKDTCPDCDGAGFVRKGGVTLRANAARKDQTQIVCARCDGLGKLNQVDK*