AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007053.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007053.01.T01 MTR_2g019630 71.354 192 13 1 196 345 317 508 9.62e-82 257
MsG0280007053.01.T01 MTR_2g019630 69.444 144 35 3 78 212 44 187 5.47e-57 193
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007053.01.T01 AT4G18270 48.148 189 56 2 199 345 292 480 4.49e-41 150

Find 124 sgRNAs with CRISPR-Local

Find 570 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCACTAGGCCTTGTGTATT+TGG 0.109524 2:+9986538 MsG0280007053.01.T01:CDS
TAATCAGAGCTTGCTATATT+TGG 0.146023 2:+9987311 MsG0280007053.01.T01:intron
TTAAGTTCACAAGGTGAAAA+TGG 0.202946 2:-9989282 None:intergenic
GTACAATTAAGGTGACATTT+AGG 0.214838 2:-9989613 None:intergenic
CTTAAAATATTGAACCATTA+TGG 0.257345 2:-9989415 None:intergenic
TATGCACCTAGTACAATATT+TGG 0.265796 2:-9989051 None:intergenic
TGACTTTAGAAGTATACTTT+AGG 0.266398 2:+9989698 MsG0280007053.01.T01:three_prime_UTR
TGTCACCGTGCCATTGCATC+TGG 0.288571 2:+9989479 MsG0280007053.01.T01:three_prime_UTR
TACAATTAAGGTGACATTTA+GGG 0.304455 2:-9989612 None:intergenic
TTCTGCTTCTGCATCAAATA+AGG 0.305053 2:+9984310 MsG0280007053.01.T01:CDS
GACTTTAGAAGTATACTTTA+GGG 0.312286 2:+9989699 MsG0280007053.01.T01:three_prime_UTR
CGCTGGAGGCATTGCTGCAT+TGG 0.325156 2:+9986643 MsG0280007053.01.T01:CDS
ACATATTAAATCTTGATCAT+TGG 0.337478 2:+9989370 MsG0280007053.01.T01:three_prime_UTR
CACACAGTATTTGTAGCAAA+TGG 0.344274 2:+9982583 MsG0280007053.01.T01:CDS
CCTTGTGAACTTAAGAAGAT+TGG 0.353244 2:+9989291 MsG0280007053.01.T01:three_prime_UTR
ATATCTGATTTCATCTGTAT+TGG 0.361680 2:+9989071 MsG0280007053.01.T01:CDS
GAAGTATACTTTAGGGCATT+GGG 0.363966 2:+9989706 MsG0280007053.01.T01:three_prime_UTR
CCACTAGGCCTTGTGTATTT+GGG 0.365665 2:+9986539 MsG0280007053.01.T01:CDS
AAATTAGCAGATGCTCTTGA+TGG 0.370803 2:+9986617 MsG0280007053.01.T01:CDS
AAATGGAGGCGGCGATAAAA+AGG 0.371959 2:-9989012 None:intergenic
ATCAAATAAGGATGCTTTAA+CGG 0.379467 2:+9984322 MsG0280007053.01.T01:CDS
ATTGTCATTTCCATTGCATC+TGG 0.383281 2:+9989509 MsG0280007053.01.T01:three_prime_UTR
ATGTTTCTTGTCAATGTACT+TGG 0.392169 2:-9989351 None:intergenic
TGCTATATTTGGAGCTTCAA+TGG 0.399920 2:+9987322 MsG0280007053.01.T01:CDS
GTTCTCTGAACCTGCGCAAA+TGG 0.401032 2:-9989029 None:intergenic
GCGTATGACGTACTCTCTTC+AGG 0.404809 2:-9984218 None:intergenic
AGAAGTATACTTTAGGGCAT+TGG 0.407822 2:+9989705 MsG0280007053.01.T01:three_prime_UTR
ATCAAAGTCTTCGCCGTCAC+TGG 0.415715 2:-9984246 None:intergenic
CTTAGTTAAAAGTACACTTT+CGG 0.421242 2:+9989655 MsG0280007053.01.T01:three_prime_UTR
GCTGTACTTCCAATATGTTC+TGG 0.422943 2:+9986686 MsG0280007053.01.T01:CDS
TCATCTGTATTGGCTTTGCT+TGG 0.425168 2:+9989081 MsG0280007053.01.T01:CDS
TGAACACCTTGGCAAATCAA+TGG 0.430050 2:-9982677 None:intergenic
CTAAATGTCGGGTGGCACTT+TGG 0.436710 2:+9989447 MsG0280007053.01.T01:three_prime_UTR
TGATACTAACCAGAACATAT+TGG 0.436964 2:-9986695 None:intergenic
AAGAAGAGAGGGCAAGTAAG+AGG 0.441874 2:-9986484 None:intergenic
GTGCCACCCGACATTTAGTA+TGG 0.442194 2:-9989442 None:intergenic
TCTGTATTGGCTTTGCTTGG+CGG 0.445037 2:+9989084 MsG0280007053.01.T01:CDS
GCTCATCGGCTTGTAACCAT+TGG 0.450505 2:+9984350 MsG0280007053.01.T01:CDS
TTAAATCTAGGCCACACATT+AGG 0.456497 2:-9989555 None:intergenic
TAAGTTCACAAGGTGAAAAT+GGG 0.456951 2:-9989281 None:intergenic
GGAGGGGACACAAGAATCAT+AGG 0.464676 2:+9984372 MsG0280007053.01.T01:CDS
GTTCGACGAAATGTTTCTAC+TGG 0.470389 2:+9983565 MsG0280007053.01.T01:CDS
TACACAAGGCCTAGTGGTAG+TGG 0.472537 2:-9986533 None:intergenic
CATGTCTACAACAAATCATA+AGG 0.475081 2:-9989861 None:intergenic
CTCATCGGCTTGTAACCATT+GGG 0.481458 2:+9984351 MsG0280007053.01.T01:CDS
GCTTTGCTTGGCGGATATGT+TGG 0.485424 2:+9989093 MsG0280007053.01.T01:CDS
AGTTCACCATACTAAATGTC+GGG 0.489668 2:+9989436 MsG0280007053.01.T01:three_prime_UTR
ATATTTGGAGCTTCAATGGC+GGG 0.492142 2:+9987326 MsG0280007053.01.T01:CDS
GTCTTCGCCGTCACTGGATG+AGG 0.497306 2:-9984240 None:intergenic
GTCACGGTGACATTAAATCT+AGG 0.499414 2:-9989567 None:intergenic
AGTGACGGCGAAGACTTTGA+TGG 0.502613 2:+9984248 MsG0280007053.01.T01:CDS
TCAATGGCGGGATCTTGTGT+TGG 0.516188 2:+9987338 MsG0280007053.01.T01:CDS
GGCAAATCAACATCATGCAC+CGG 0.521106 2:-9984287 None:intergenic
GACCACATAGCGAGGATACC+AGG 0.523179 2:-9989223 None:intergenic
ACACAGTATTTGTAGCAAAT+GGG 0.524897 2:+9982584 MsG0280007053.01.T01:CDS
AAAAGTACACTTTCGGACAT+TGG 0.532200 2:+9989662 MsG0280007053.01.T01:three_prime_UTR
TCTCTTCTTTACTTACATGC+AGG 0.539721 2:+9986498 MsG0280007053.01.T01:CDS
TTGTCATTTCCATTGCATCT+GGG 0.541251 2:+9989510 MsG0280007053.01.T01:three_prime_UTR
GATGCTCTTGATGGACTCGC+TGG 0.542083 2:+9986626 MsG0280007053.01.T01:CDS
AACTTCTCATACGGATATGT+TGG 0.542319 2:+9989151 MsG0280007053.01.T01:three_prime_UTR
ATTCTTGTGTCCCCTCCCAA+TGG 0.546553 2:-9984366 None:intergenic
AAGTTCACCATACTAAATGT+CGG 0.551332 2:+9989435 MsG0280007053.01.T01:three_prime_UTR
ATCGCCGCCTCCATTTGCGC+AGG 0.553524 2:+9989019 MsG0280007053.01.T01:CDS
AATATTTGCAACACATAGGA+TGG 0.554474 2:+9989809 MsG0280007053.01.T01:three_prime_UTR
CTTTAACGGTGGCTGCTCAT+CGG 0.555401 2:+9984336 MsG0280007053.01.T01:CDS
CCATGTCCATTGATTTGCCA+AGG 0.556752 2:+9982671 MsG0280007053.01.T01:CDS
TGTTTCTTGTCAATGTACTT+GGG 0.559534 2:-9989350 None:intergenic
ACAATTAAGGTGACATTTAG+GGG 0.561701 2:-9989611 None:intergenic
CTCTGAACCTGCGCAAATGG+AGG 0.563261 2:-9989026 None:intergenic
GTCACGTGAAACTTCTCATA+CGG 0.565582 2:+9989142 MsG0280007053.01.T01:three_prime_UTR
GCAAATCAACATCATGCACC+GGG 0.566415 2:-9984286 None:intergenic
TGAACCTGCGCAAATGGAGG+CGG 0.570674 2:-9989023 None:intergenic
TATTATCTTGCGTGAACGTG+AGG 0.572241 2:+9983474 MsG0280007053.01.T01:CDS
GTGAAACTCTCATACTTACC+TGG 0.573790 2:+9989205 MsG0280007053.01.T01:three_prime_UTR
GTCACCGTGCCATTGCATCT+GGG 0.576863 2:+9989480 MsG0280007053.01.T01:three_prime_UTR
TTATTTGATGCAGAAGCAGA+AGG 0.577035 2:-9984308 None:intergenic
AGAGAACCAAATATTGTACT+AGG 0.577972 2:+9989045 MsG0280007053.01.T01:CDS
TGGTGACATCTTTCTTACCC+CGG 0.579457 2:+9984268 MsG0280007053.01.T01:CDS
GATAAACCTTACATCATCGA+AGG 0.580257 2:-9983590 None:intergenic
CCAATCTTCTTAAGTTCACA+AGG 0.580288 2:-9989291 None:intergenic
AAATAAGGATGCTTTAACGG+TGG 0.581346 2:+9984325 MsG0280007053.01.T01:CDS
GCGTAAAACAAACCCTCTTG+TGG 0.585661 2:-9989257 None:intergenic
TATTGTACTTGAAGATAACA+AGG 0.597081 2:+9988951 MsG0280007053.01.T01:CDS
ACATTACTCCCACTACCACT+AGG 0.597149 2:+9986524 MsG0280007053.01.T01:CDS
GTACACTTTCGGACATTGGT+GGG 0.601042 2:+9989666 MsG0280007053.01.T01:three_prime_UTR
TCGGCTTGTAACCATTGGGA+GGG 0.601989 2:+9984355 MsG0280007053.01.T01:CDS
GCATGTAAGTAAAGAAGAGA+GGG 0.602140 2:-9986495 None:intergenic
CCTTGGCAAATCAATGGACA+TGG 0.602407 2:-9982671 None:intergenic
AACAAGTACACAAGTACACA+TGG 0.603078 2:+9982637 MsG0280007053.01.T01:CDS
GTTGTGTGGCCCAGATGCAA+TGG 0.604462 2:-9989519 None:intergenic
AAAACAAACCCTCTTGTGGT+TGG 0.606710 2:-9989253 None:intergenic
GCTCTTGATGGACTCGCTGG+AGG 0.611643 2:+9986629 MsG0280007053.01.T01:CDS
CAATGTACTTGGGTTCACAA+TGG 0.611782 2:-9989340 None:intergenic
CCCAAATACACAAGGCCTAG+TGG 0.612111 2:-9986539 None:intergenic
ATCGGCTTGTAACCATTGGG+AGG 0.613091 2:+9984354 MsG0280007053.01.T01:CDS
AGTACACTTTCGGACATTGG+TGG 0.616238 2:+9989665 MsG0280007053.01.T01:three_prime_UTR
TCTAGAACACCAACCACAAG+AGG 0.620175 2:+9989244 MsG0280007053.01.T01:three_prime_UTR
TACCTGGTATCCTCGCTATG+TGG 0.622355 2:+9989221 MsG0280007053.01.T01:three_prime_UTR
ATCTAATGTCACCTAATGTG+TGG 0.624476 2:+9989544 MsG0280007053.01.T01:three_prime_UTR
AACAACATGAGGTCAAGAGT+TGG 0.629730 2:-9986571 None:intergenic
TGCATGTAAGTAAAGAAGAG+AGG 0.629854 2:-9986496 None:intergenic
CGGCTTGTAACCATTGGGAG+GGG 0.632376 2:+9984356 MsG0280007053.01.T01:CDS
TATATTTGGAGCTTCAATGG+CGG 0.633674 2:+9987325 MsG0280007053.01.T01:CDS
TGAGCTGTATTGTTGAATAA+CGG 0.635678 2:-9983539 None:intergenic
AATGTGTGGCCCAGATGCAA+TGG 0.636563 2:-9989489 None:intergenic
ACACAAGGCCTAGTGGTAGT+GGG 0.640117 2:-9986532 None:intergenic
GTATAATATTTGCAACACAT+AGG 0.642586 2:+9989805 MsG0280007053.01.T01:three_prime_UTR
TAATTTAACACCATGTCCCA+TGG 0.642697 2:-9986600 None:intergenic
ATTGTACTTGAAGATAACAA+GGG 0.644816 2:+9988952 MsG0280007053.01.T01:CDS
CATGGAAACAAAACAACATG+AGG 0.648409 2:-9986582 None:intergenic
TATGTTTCTCATCACCGTTG+CGG 0.653079 2:+9989783 MsG0280007053.01.T01:three_prime_UTR
TTGCAAATATTATACCGCAA+CGG 0.674174 2:-9989797 None:intergenic
GGACTCCAATCATCGAGTAG+CGG 0.674997 2:-9984197 None:intergenic
CTTGTGTGACATTAATGTCA+CGG 0.677126 2:-9989583 None:intergenic
GTGACATTAGATATGTTGTG+TGG 0.678458 2:-9989533 None:intergenic
CTAGAACACCAACCACAAGA+GGG 0.695730 2:+9989245 MsG0280007053.01.T01:three_prime_UTR
GTGTTCTAGACCACATAGCG+AGG 0.698119 2:-9989231 None:intergenic
GCAATGGAAATGACAATGTG+TGG 0.703229 2:-9989503 None:intergenic
GTGGCCCAGATGCAATGGCA+CGG 0.703908 2:-9989484 None:intergenic
TCACCATACTAAATGTCGGG+TGG 0.706349 2:+9989439 MsG0280007053.01.T01:three_prime_UTR
AATATCGTCCCAAATACACA+AGG 0.714854 2:-9986547 None:intergenic
TAGATTCAACTAGCGAACTG+CGG 0.715988 2:+9982560 MsG0280007053.01.T01:CDS
TCATACGCCTCATCCAGTGA+CGG 0.726854 2:+9984233 MsG0280007053.01.T01:CDS
CAAATCAACATCATGCACCG+GGG 0.753660 2:-9984285 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATCAGATATAAATTTA+TGG - Chr2:9987553-9987572 None:intergenic 10.0%
!! ATAAATAGGTTAAATAATAT+GGG + Chr2:9983133-9983152 MsG0280007053.01.T01:intron 10.0%
!! TATAAATAGGTTAAATAATA+TGG + Chr2:9983132-9983151 MsG0280007053.01.T01:intron 10.0%
!! TGTATATGAATTAATAAAAT+TGG + Chr2:9986898-9986917 MsG0280007053.01.T01:intron 10.0%
!!! ATTAATGTTTTTTTATTGAA+TGG - Chr2:9986410-9986429 None:intergenic 10.0%
!!! GGAATTTATTTTAAAAATAA+TGG + Chr2:9984545-9984564 MsG0280007053.01.T01:intron 10.0%
!! AAAAAACATTAATATTTGTC+AGG + Chr2:9986417-9986436 MsG0280007053.01.T01:intron 15.0%
!! AATTTCTTTATAAAATCACA+TGG + Chr2:9985986-9986005 MsG0280007053.01.T01:intron 15.0%
!! ATAGTGCAAATATTATAAAT+AGG + Chr2:9983119-9983138 MsG0280007053.01.T01:intron 15.0%
!! ATTAAAGTTTAAATAAATGC+AGG - Chr2:9988721-9988740 None:intergenic 15.0%
!! GAAGAAAAGAAAAAAAAAAA+AGG - Chr2:9987644-9987663 None:intergenic 15.0%
!! TAATATGGTTTATAGAAATT+TGG + Chr2:9984495-9984514 MsG0280007053.01.T01:intron 15.0%
!! TTATGAAATGAAATATAGAA+TGG - Chr2:9983221-9983240 None:intergenic 15.0%
!!! AATTTTGTATTTTGATCAAT+TGG - Chr2:9987910-9987929 None:intergenic 15.0%
!!! AATTTTTAACTTTGTCATTA+TGG - Chr2:9989318-9989337 None:intergenic 15.0%
!!! AGATTTCATTAATTTTTTGT+CGG + Chr2:9984691-9984710 MsG0280007053.01.T01:intron 15.0%
!!! AGTATTTTATAGCATTAATA+TGG + Chr2:9984480-9984499 MsG0280007053.01.T01:intron 15.0%
!!! ATAGTGTAAATAATGTATTT+TGG + Chr2:9986817-9986836 MsG0280007053.01.T01:intron 15.0%
!!! ATAGTTTTAATTTTACATCT+TGG + Chr2:9988355-9988374 MsG0280007053.01.T01:intron 15.0%
!!! TAAAGTGTATTATAGTATTT+TGG - Chr2:9988332-9988351 None:intergenic 15.0%
!!! TAATATTTTCAACATTTAGA+AGG - Chr2:9989765-9989784 None:intergenic 15.0%
!!! TAATTTGAAGCATTATTTTT+TGG + Chr2:9985324-9985343 MsG0280007053.01.T01:intron 15.0%
!!! TATTTTTCATACGAAATTAA+GGG + Chr2:9988021-9988040 MsG0280007053.01.T01:intron 15.0%
!!! TTAATCATTTGACTTATTTT+CGG + Chr2:9984028-9984047 MsG0280007053.01.T01:intron 15.0%
!!! TTTTAAAATAAATTCCTTAG+AGG - Chr2:9984541-9984560 None:intergenic 15.0%
!!! TTTTTTTTGTTGTACAATTA+AGG - Chr2:9989627-9989646 None:intergenic 15.0%
!! AAAAGAATGAAAAAAAGTTG+AGG - Chr2:9986322-9986341 None:intergenic 20.0%
!! AAAATCATTAAAACGTGAAT+TGG - Chr2:9984831-9984850 None:intergenic 20.0%
!! AAAATTGAATGAATGAGAAT+AGG + Chr2:9987924-9987943 MsG0280007053.01.T01:intron 20.0%
!! AAAGAATGAAAAAAAGTTGA+GGG - Chr2:9986321-9986340 None:intergenic 20.0%
!! AAATCATTAAAACGTGAATT+GGG - Chr2:9984830-9984849 None:intergenic 20.0%
!! AAATGAAATATAGAATGGAA+TGG - Chr2:9983216-9983235 None:intergenic 20.0%
!! AAATTGAATGAATGAGAATA+GGG + Chr2:9987925-9987944 MsG0280007053.01.T01:intron 20.0%
!! AATGAAATATAGAATGGAAT+GGG - Chr2:9983215-9983234 None:intergenic 20.0%
!! AATGAAATCTCAATTCATTT+AGG - Chr2:9984681-9984700 None:intergenic 20.0%
!! ACATATTAAATCTTGATCAT+TGG + Chr2:9989370-9989389 MsG0280007053.01.T01:three_prime_UTR 20.0%
!! ATAATCCAATCAATATAGAT+TGG - Chr2:9983821-9983840 None:intergenic 20.0%
!! ATACATAAATGTAATACATG+CGG - Chr2:9984579-9984598 None:intergenic 20.0%
!! ATGTAAAAATGTGAAGTTAT+TGG + Chr2:9987813-9987832 MsG0280007053.01.T01:intron 20.0%
!! ATTTAACTCGTGAAATAAAA+AGG - Chr2:9987581-9987600 None:intergenic 20.0%
!! CTTAAAATATTGAACCATTA+TGG - Chr2:9989418-9989437 None:intergenic 20.0%
!! GCAAATGATAAAAGTAAAAA+TGG - Chr2:9986244-9986263 None:intergenic 20.0%
!! TAAAGCAAGCTATTAAAATT+TGG - Chr2:9988917-9988936 None:intergenic 20.0%
!!! AATCTTAATCTAAGATATAC+TGG - Chr2:9985440-9985459 None:intergenic 20.0%
!!! ATAAACTATAGTTCTAGAAA+TGG + Chr2:9988066-9988085 MsG0280007053.01.T01:intron 20.0%
!!! ATCTATATTGATTGGATTAT+AGG + Chr2:9983821-9983840 MsG0280007053.01.T01:intron 20.0%
!!! ATGAAATATTCCTTTGAAAA+GGG - Chr2:9984440-9984459 None:intergenic 20.0%
!!! CGGATAATATCTTTTAATTA+TGG - Chr2:9988870-9988889 None:intergenic 20.0%
!!! CTATTTTTCATACGAAATTA+AGG + Chr2:9988020-9988039 MsG0280007053.01.T01:intron 20.0%
!!! CTTTAAAATGACGAAAAATT+GGG - Chr2:9985029-9985048 None:intergenic 20.0%
!!! GTAATAGGAAAATTTTAAGT+GGG + Chr2:9985831-9985850 MsG0280007053.01.T01:intron 20.0%
!!! TAATAGGAAAATTTTAAGTG+GGG + Chr2:9985832-9985851 MsG0280007053.01.T01:intron 20.0%
!!! TAATCATTTGACTTATTTTC+GGG + Chr2:9984029-9984048 MsG0280007053.01.T01:intron 20.0%
!!! TAATTTTACATCTTGGTTTT+TGG + Chr2:9988362-9988381 MsG0280007053.01.T01:intron 20.0%
!!! TACACTATATTCTCTATTTT+AGG - Chr2:9986805-9986824 None:intergenic 20.0%
!!! TATGAAATATTCCTTTGAAA+AGG - Chr2:9984441-9984460 None:intergenic 20.0%
!!! TCTATATTGATTGGATTATA+GGG + Chr2:9983822-9983841 MsG0280007053.01.T01:intron 20.0%
!!! TGTAATAGGAAAATTTTAAG+TGG + Chr2:9985830-9985849 MsG0280007053.01.T01:intron 20.0%
!!! TGTACTACTTTTATATGTAT+TGG + Chr2:9984902-9984921 MsG0280007053.01.T01:intron 20.0%
!!! TGTATTATAGTATTTTGGTT+GGG - Chr2:9988327-9988346 None:intergenic 20.0%
!!! TTAAGTTTAAAATTGTGCAT+TGG - Chr2:9982970-9982989 None:intergenic 20.0%
!!! TTCTTTTCTTCTTTTCAAAT+CGG + Chr2:9987653-9987672 MsG0280007053.01.T01:intron 20.0%
!!! TTTTCTTTTTTTATAGACGA+GGG - Chr2:9989732-9989751 None:intergenic 20.0%
!!! TTTTTCTTTTTTTATAGACG+AGG - Chr2:9989733-9989752 None:intergenic 20.0%
!!! TTTTTTTATACCCTTTTCAA+AGG + Chr2:9984427-9984446 MsG0280007053.01.T01:intron 20.0%
! AAAATGGCTGATATAAGAAA+TGG - Chr2:9984979-9984998 None:intergenic 25.0%
! ATAGGTTAAATAATATGGGA+CGG + Chr2:9983137-9983156 MsG0280007053.01.T01:intron 25.0%
! ATAGTTTATATACCAAACCT+TGG - Chr2:9988055-9988074 None:intergenic 25.0%
! ATATCTGATTTCATCTGTAT+TGG + Chr2:9989071-9989090 MsG0280007053.01.T01:CDS 25.0%
! ATCAAATAAGGATGCTTTAA+CGG + Chr2:9984322-9984341 MsG0280007053.01.T01:CDS 25.0%
! ATTGTACTTGAAGATAACAA+GGG + Chr2:9988952-9988971 MsG0280007053.01.T01:CDS 25.0%
! ATTTCGTATGAAAAATAGAG+AGG - Chr2:9988018-9988037 None:intergenic 25.0%
! ATTTGACACATTGATCAAAA+TGG - Chr2:9983957-9983976 None:intergenic 25.0%
! CATAAACTACTACAAGATAA+AGG - Chr2:9988803-9988822 None:intergenic 25.0%
! CCTCTTAAAAAATCATTAGA+AGG - Chr2:9987844-9987863 None:intergenic 25.0%
! CTTGAAATATAGTATCTTCA+AGG + Chr2:9986740-9986759 MsG0280007053.01.T01:intron 25.0%
! GTATAATATTTGCAACACAT+AGG + Chr2:9989805-9989824 MsG0280007053.01.T01:three_prime_UTR 25.0%
! TAAAAATGTGAAGTTATTGG+TGG + Chr2:9987816-9987835 MsG0280007053.01.T01:intron 25.0%
! TAATATTGTTCAGTCTGAAA+AGG - Chr2:9987158-9987177 None:intergenic 25.0%
! TACAATTAAGGTGACATTTA+GGG - Chr2:9989615-9989634 None:intergenic 25.0%
! TATACACTCAACATTAGTAA+TGG + Chr2:9988107-9988126 MsG0280007053.01.T01:intron 25.0%
! TATTAGCTAATCTAATAACC+TGG + Chr2:9983668-9983687 MsG0280007053.01.T01:intron 25.0%
! TATTGTACTTGAAGATAACA+AGG + Chr2:9988951-9988970 MsG0280007053.01.T01:CDS 25.0%
! TGAAAATTCTACTCAATGTT+AGG + Chr2:9985805-9985824 MsG0280007053.01.T01:intron 25.0%
! TGTGTAGTATCAAAAAGAAA+TGG - Chr2:9985471-9985490 None:intergenic 25.0%
! TTCTCATAAAAACACTTCAT+TGG + Chr2:9985615-9985634 MsG0280007053.01.T01:intron 25.0%
! TTTCGTATGAAAAATAGAGA+GGG - Chr2:9988017-9988036 None:intergenic 25.0%
!! ACTAGTTTAATCTTTCTCAT+CGG + Chr2:9985742-9985761 MsG0280007053.01.T01:intron 25.0%
!! ATAAGAATCTTTTTGGACTT+TGG + Chr2:9985907-9985926 MsG0280007053.01.T01:intron 25.0%
!! ATTTCTTATATCAGCCATTT+TGG + Chr2:9984978-9984997 MsG0280007053.01.T01:intron 25.0%
!! ATTTCTTTTTGATACTACAC+AGG + Chr2:9985470-9985489 MsG0280007053.01.T01:intron 25.0%
!! CTTAGTTAAAAGTACACTTT+CGG + Chr2:9989655-9989674 MsG0280007053.01.T01:three_prime_UTR 25.0%
!! GACTTTAGAAGTATACTTTA+GGG + Chr2:9989699-9989718 MsG0280007053.01.T01:three_prime_UTR 25.0%
!! GCAGTTTATAAGAATCTTTT+TGG + Chr2:9985900-9985919 MsG0280007053.01.T01:intron 25.0%
!! GTGTCAAGAATTTAGTTTAT+AGG + Chr2:9983982-9984001 MsG0280007053.01.T01:intron 25.0%
!! TGACTTTAGAAGTATACTTT+AGG + Chr2:9989698-9989717 MsG0280007053.01.T01:three_prime_UTR 25.0%
!! TGATATCTGTTCTATTGATT+AGG + Chr2:9986445-9986464 MsG0280007053.01.T01:intron 25.0%
!! TTGAACATGATAATGCAATA+GGG + Chr2:9986870-9986889 MsG0280007053.01.T01:intron 25.0%
!!! AATAGGAAAATTTTAAGTGG+GGG + Chr2:9985833-9985852 MsG0280007053.01.T01:intron 25.0%
!!! AATCATTTGACTTATTTTCG+GGG + Chr2:9984030-9984049 MsG0280007053.01.T01:intron 25.0%
!!! ACCAAGATAGAACTTTTTTA+GGG - Chr2:9985391-9985410 None:intergenic 25.0%
!!! ATACAAAGCATCTGTTTTTA+TGG + Chr2:9987379-9987398 MsG0280007053.01.T01:CDS 25.0%
!!! ATTTTTTAACTTCGCCATAA+TGG + Chr2:9989401-9989420 MsG0280007053.01.T01:three_prime_UTR 25.0%
!!! CCTTCTAATGATTTTTTAAG+AGG + Chr2:9987841-9987860 MsG0280007053.01.T01:intron 25.0%
!!! GCTTTAAAATGACGAAAAAT+TGG - Chr2:9985030-9985049 None:intergenic 25.0%
!!! GGTTTATTTTTTGTACCTAT+TGG + Chr2:9985116-9985135 MsG0280007053.01.T01:intron 25.0%
!!! GTATTATAGTATTTTGGTTG+GGG - Chr2:9988326-9988345 None:intergenic 25.0%
!!! GTGTATTATAGTATTTTGGT+TGG - Chr2:9988328-9988347 None:intergenic 25.0%
!!! TACAAAGCATCTGTTTTTAT+GGG + Chr2:9987380-9987399 MsG0280007053.01.T01:CDS 25.0%
!!! TATTATAGTATTTTGGTTGG+GGG - Chr2:9988325-9988344 None:intergenic 25.0%
!!! TATTTGAGATTTCTCTGTTT+TGG + Chr2:9987007-9987026 MsG0280007053.01.T01:intron 25.0%
!!! TCGCATATATTTAGTTTTGA+GGG + Chr2:9983877-9983896 MsG0280007053.01.T01:intron 25.0%
!!! TGACATTTGTTATGTTTTAC+AGG + Chr2:9984160-9984179 MsG0280007053.01.T01:intron 25.0%
!!! TTCTTTGAAATTCTAGAAGA+GGG + Chr2:9985860-9985879 MsG0280007053.01.T01:intron 25.0%
!!! TTTCTTTGAAATTCTAGAAG+AGG + Chr2:9985859-9985878 MsG0280007053.01.T01:intron 25.0%
!!! TTTGTATTTTGATCAATTGG+CGG - Chr2:9987907-9987926 None:intergenic 25.0%
AAGTTCACCATACTAAATGT+CGG + Chr2:9989435-9989454 MsG0280007053.01.T01:three_prime_UTR 30.0%
AATATTTGCAACACATAGGA+TGG + Chr2:9989809-9989828 MsG0280007053.01.T01:three_prime_UTR 30.0%
AATGTGTCAAATGAACTAGT+TGG + Chr2:9983918-9983937 MsG0280007053.01.T01:intron 30.0%
ACAATTAAGGTGACATTTAG+GGG - Chr2:9989614-9989633 None:intergenic 30.0%
ACACAGTATTTGTAGCAAAT+GGG + Chr2:9982584-9982603 MsG0280007053.01.T01:CDS 30.0%
ACCAACCAATAATCCATATA+GGG - Chr2:9988645-9988664 None:intergenic 30.0%
ACTAGGTCAAGTAATATAGA+CGG - Chr2:9982930-9982949 None:intergenic 30.0%
AGAAATCTCAAATAGCATGA+AGG - Chr2:9987001-9987020 None:intergenic 30.0%
AGAGAACCAAATATTGTACT+AGG + Chr2:9989045-9989064 MsG0280007053.01.T01:CDS 30.0%
AGAGGTAAACTATACAAGTA+TGG - Chr2:9987731-9987750 None:intergenic 30.0%
ATCTAATAACCTGGATCATT+AGG + Chr2:9983677-9983696 MsG0280007053.01.T01:intron 30.0%
ATCTTTCCTGAAAATGACAA+CGG - Chr2:9988890-9988909 None:intergenic 30.0%
ATGTTTCTTGTCAATGTACT+TGG - Chr2:9989354-9989373 None:intergenic 30.0%
ATTTCTATTGAGAAATCGAG+AGG + Chr2:9988137-9988156 MsG0280007053.01.T01:intron 30.0%
CAAGTATGTTGAAAAACTTG+TGG + Chr2:9984395-9984414 MsG0280007053.01.T01:intron 30.0%
CACAATATTAATGTCTCAAG+AGG - Chr2:9986925-9986944 None:intergenic 30.0%
CATGTCTACAACAAATCATA+AGG - Chr2:9989864-9989883 None:intergenic 30.0%
CATTATCTCTCATCAAAATC+TGG + Chr2:9987052-9987071 MsG0280007053.01.T01:intron 30.0%
GATAGCCAATCTATATTGAT+TGG + Chr2:9983813-9983832 MsG0280007053.01.T01:intron 30.0%
GCACAACAAAGATGAAAATT+TGG + Chr2:9984627-9984646 MsG0280007053.01.T01:intron 30.0%
GTACAATTAAGGTGACATTT+AGG - Chr2:9989616-9989635 None:intergenic 30.0%
GTACCCTAGTAAAATAACAT+AGG - Chr2:9987189-9987208 None:intergenic 30.0%
GTTTAAATAAATGCAGGTCA+TGG - Chr2:9988715-9988734 None:intergenic 30.0%
TAAGTTCACAAGGTGAAAAT+GGG - Chr2:9989284-9989303 None:intergenic 30.0%
TACAAGTATGGTAACTAGTT+AGG - Chr2:9987719-9987738 None:intergenic 30.0%
TATAACTAGCAGAACTTCTA+TGG - Chr2:9982724-9982743 None:intergenic 30.0%
TATGCACCTAGTACAATATT+TGG - Chr2:9989054-9989073 None:intergenic 30.0%
TCTCGATTTCTCAATAGAAA+TGG - Chr2:9988138-9988157 None:intergenic 30.0%
TGAGCAACAATTATACCAAT+AGG - Chr2:9985134-9985153 None:intergenic 30.0%
TGAGCTGTATTGTTGAATAA+CGG - Chr2:9983542-9983561 None:intergenic 30.0%
TGATACTAACCAGAACATAT+TGG - Chr2:9986698-9986717 None:intergenic 30.0%
TGATCAGATTAGTAACAAGA+AGG - Chr2:9985565-9985584 None:intergenic 30.0%
TGTAAGACTCAAACACAAAA+GGG - Chr2:9985664-9985683 None:intergenic 30.0%
TGTTGAAAAACTTGTGGAAA+TGG + Chr2:9984401-9984420 MsG0280007053.01.T01:intron 30.0%
TGTTTCTTGTCAATGTACTT+GGG - Chr2:9989353-9989372 None:intergenic 30.0%
TTAAGTTCACAAGGTGAAAA+TGG - Chr2:9989285-9989304 None:intergenic 30.0%
TTCCTGTTAATTGTAACAAG+TGG + Chr2:9986054-9986073 MsG0280007053.01.T01:intron 30.0%
TTGCAAATATTATACCGCAA+CGG - Chr2:9989800-9989819 None:intergenic 30.0%
TTGTAAGACTCAAACACAAA+AGG - Chr2:9985665-9985684 None:intergenic 30.0%
! AGAATTTTCAGAACGATCAA+TGG - Chr2:9985795-9985814 None:intergenic 30.0%
! ATGATTTTCAGCATCAAACT+TGG + Chr2:9984843-9984862 MsG0280007053.01.T01:intron 30.0%
! CTCTTTCTCATTTCTTTTGT+GGG + Chr2:9987747-9987766 MsG0280007053.01.T01:intron 30.0%
! CTTAATCTAAGATATACTGG+TGG - Chr2:9985437-9985456 None:intergenic 30.0%
! CTTGAACATGATAATGCAAT+AGG + Chr2:9986869-9986888 MsG0280007053.01.T01:intron 30.0%
! TATATTCCATTCTGGAGAAA+GGG - Chr2:9983186-9983205 None:intergenic 30.0%
! TCAATATAGATTGGCTATCA+AGG - Chr2:9983812-9983831 None:intergenic 30.0%
! TCTGATCAACATTTTTCTGA+TGG + Chr2:9985577-9985596 MsG0280007053.01.T01:intron 30.0%
! TTAACTTGACAAAACCTTGA+AGG + Chr2:9984067-9984086 MsG0280007053.01.T01:intron 30.0%
! TTTATATGTATTGGTGTGTG+TGG + Chr2:9984911-9984930 MsG0280007053.01.T01:intron 30.0%
!! AAGAAGTGCTCTATACAATA+TGG - Chr2:9986271-9986290 None:intergenic 30.0%
!! CAGATTTTGATGAGAGATAA+TGG - Chr2:9987054-9987073 None:intergenic 30.0%
!! CGAAAGTGTACTTTTAACTA+AGG - Chr2:9989657-9989676 None:intergenic 30.0%
!! TAATCAGAGCTTGCTATATT+TGG + Chr2:9987311-9987330 MsG0280007053.01.T01:intron 30.0%
!! TCTTTGAAATTCTAGAAGAG+GGG + Chr2:9985861-9985880 MsG0280007053.01.T01:intron 30.0%
!! TTATCAAATGAGTGTTGCTT+AGG + Chr2:9983608-9983627 MsG0280007053.01.T01:intron 30.0%
!! TTATTTTCGGGGTTTATATC+TGG + Chr2:9984041-9984060 MsG0280007053.01.T01:intron 30.0%
!!! AATGATTTTTTAAGAGGTGC+TGG + Chr2:9987847-9987866 MsG0280007053.01.T01:intron 30.0%
!!! CCAAGATAGAACTTTTTTAG+GGG - Chr2:9985390-9985409 None:intergenic 30.0%
!!! CCTCCTATGTTATTTTACTA+GGG + Chr2:9987183-9987202 MsG0280007053.01.T01:intron 30.0%
!!! CTCGCATATATTTAGTTTTG+AGG + Chr2:9983876-9983895 MsG0280007053.01.T01:intron 30.0%
!!! CTTGCTTTATTTTCTGTTTC+AGG + Chr2:9988928-9988947 MsG0280007053.01.T01:intron 30.0%
!!! GACCAAGATAGAACTTTTTT+AGG - Chr2:9985392-9985411 None:intergenic 30.0%
!!! TATTATCCGTTGTCATTTTC+AGG + Chr2:9988881-9988900 MsG0280007053.01.T01:intron 30.0%
!!! TCATGTTGTTTTGTTTCCAT+GGG + Chr2:9986584-9986603 MsG0280007053.01.T01:CDS 30.0%
!!! TCTCTATTTTAGGTTGAACA+TGG - Chr2:9986795-9986814 None:intergenic 30.0%
!!! TTCTGTTATTTTGAACACCT+TGG - Chr2:9982691-9982710 None:intergenic 30.0%
!!! TTGTATTTTGATCAATTGGC+GGG - Chr2:9987906-9987925 None:intergenic 30.0%
!!! TTTTACTAGGGTACTGAAAA+TGG + Chr2:9987195-9987214 MsG0280007053.01.T01:intron 30.0%
AAAAAATAAACCACCCAACG+TGG - Chr2:9985108-9985127 None:intergenic 35.0%
AAAAATAAACCACCCAACGT+GGG - Chr2:9985107-9985126 None:intergenic 35.0%
AAAATTCCCTTTCTCCAGAA+TGG + Chr2:9983177-9983196 MsG0280007053.01.T01:intron 35.0%
AAAGCTCAACATCAAATGTG+GGG - Chr2:9986960-9986979 None:intergenic 35.0%
AAATAAGGATGCTTTAACGG+TGG + Chr2:9984325-9984344 MsG0280007053.01.T01:CDS 35.0%
AAATTAGCAGATGCTCTTGA+TGG + Chr2:9986617-9986636 MsG0280007053.01.T01:CDS 35.0%
AACAAGTACACAAGTACACA+TGG + Chr2:9982637-9982656 MsG0280007053.01.T01:CDS 35.0%
AACTTCTCATACGGATATGT+TGG + Chr2:9989151-9989170 MsG0280007053.01.T01:three_prime_UTR 35.0%
AATATCGTCCCAAATACACA+AGG - Chr2:9986550-9986569 None:intergenic 35.0%
AATTCCAGAGGAATTAGTAG+CGG - Chr2:9987473-9987492 None:intergenic 35.0%
ACAAAGCTCAACATCAAATG+TGG - Chr2:9986962-9986981 None:intergenic 35.0%
AGAAGAGGAAGAATAAACGA+GGG - Chr2:9983387-9983406 None:intergenic 35.0%
AGGATTCTTATCCATCGATA+GGG + Chr2:9988157-9988176 MsG0280007053.01.T01:intron 35.0%
AGGGAGGAATGATTAGAAAA+GGG + Chr2:9986162-9986181 MsG0280007053.01.T01:intron 35.0%
AGTTCACCATACTAAATGTC+GGG + Chr2:9989436-9989455 MsG0280007053.01.T01:three_prime_UTR 35.0%
ATAACTCTCTCAAACAGAGA+AGG - Chr2:9986358-9986377 None:intergenic 35.0%
ATAGGGGATATTGTGGAATT+AGG + Chr2:9986196-9986215 MsG0280007053.01.T01:intron 35.0%
ATCACTATGGGGCTTATAAT+CGG + Chr2:9984873-9984892 MsG0280007053.01.T01:intron 35.0%
ATCTAATGTCACCTAATGTG+TGG + Chr2:9989544-9989563 MsG0280007053.01.T01:three_prime_UTR 35.0%
ATTATACTTGTGCTACCTTC+CGG + Chr2:9987970-9987989 MsG0280007053.01.T01:intron 35.0%
CAAAGCTCAACATCAAATGT+GGG - Chr2:9986961-9986980 None:intergenic 35.0%
CACACAGTATTTGTAGCAAA+TGG + Chr2:9982583-9982602 MsG0280007053.01.T01:CDS 35.0%
CACCAACCAATAATCCATAT+AGG - Chr2:9988646-9988665 None:intergenic 35.0%
CACTTCTATAGATGAGGTAT+CGG - Chr2:9985165-9985184 None:intergenic 35.0%
CATGGAAACAAAACAACATG+AGG - Chr2:9986585-9986604 None:intergenic 35.0%
CATTATCATGTTCAAGTGCA+AGG - Chr2:9986865-9986884 None:intergenic 35.0%
CATTTGAGAAATGTGCTCAA+AGG + Chr2:9987614-9987633 MsG0280007053.01.T01:intron 35.0%
CCAATCTTCTTAAGTTCACA+AGG - Chr2:9989294-9989313 None:intergenic 35.0%
CCACAAAAGAAATGAGAAAG+AGG - Chr2:9987749-9987768 None:intergenic 35.0%
CCCCTAAAAAAGTTCTATCT+TGG + Chr2:9985387-9985406 MsG0280007053.01.T01:intron 35.0%
CCCTAGTAAAATAACATAGG+AGG - Chr2:9987186-9987205 None:intergenic 35.0%
CCTTGTGAACTTAAGAAGAT+TGG + Chr2:9989291-9989310 MsG0280007053.01.T01:three_prime_UTR 35.0%
CTAGTAGTAATATGTCAGCA+GGG - Chr2:9985963-9985982 None:intergenic 35.0%
CTCAACTATGAAAATTCCAG+AGG - Chr2:9987485-9987504 None:intergenic 35.0%
CTTAGACATCACTTGAAAAG+TGG + Chr2:9985078-9985097 MsG0280007053.01.T01:intron 35.0%
CTTGAAATGCATCTTAAGGT+TGG + Chr2:9984716-9984735 MsG0280007053.01.T01:intron 35.0%
CTTGTGTGACATTAATGTCA+CGG - Chr2:9989586-9989605 None:intergenic 35.0%
CTTTGAGCACATTTCTCAAA+TGG - Chr2:9987616-9987635 None:intergenic 35.0%
GAATGAATGAGAATAGGGAT+GGG + Chr2:9987930-9987949 MsG0280007053.01.T01:intron 35.0%
GATAAACCTTACATCATCGA+AGG - Chr2:9983593-9983612 None:intergenic 35.0%
GCAAACAGAAGAAATGACTA+TGG - Chr2:9986297-9986316 None:intergenic 35.0%
GGATCTTGAAATGCATCTTA+AGG + Chr2:9984712-9984731 MsG0280007053.01.T01:intron 35.0%
GTAAGACTCAAACACAAAAG+GGG - Chr2:9985663-9985682 None:intergenic 35.0%
GTCAGGTAAAAAGGTGATAA+CGG - Chr2:9984952-9984971 None:intergenic 35.0%
GTCGTCATTAGTTATTCTTC+AGG + Chr2:9987504-9987523 MsG0280007053.01.T01:intron 35.0%
GTCTGAAAAGGAAAAAACTG+AGG - Chr2:9987146-9987165 None:intergenic 35.0%
GTGACATTAGATATGTTGTG+TGG - Chr2:9989536-9989555 None:intergenic 35.0%
GTTAAATAATATGGGACGGA+GGG + Chr2:9983141-9983160 MsG0280007053.01.T01:intron 35.0%
TAAACCTCACCAAGAATCAT+TGG + Chr2:9985243-9985262 MsG0280007053.01.T01:intron 35.0%
TAATTTAACACCATGTCCCA+TGG - Chr2:9986603-9986622 None:intergenic 35.0%
TCCATATAGGGATGTCAATA+AGG - Chr2:9988633-9988652 None:intergenic 35.0%
TCCATGTTATCAAGCAACAA+TGG + Chr2:9985052-9985071 MsG0280007053.01.T01:intron 35.0%
TCTAGTAGTAATATGTCAGC+AGG - Chr2:9985964-9985983 None:intergenic 35.0%
TGAATGAATGAGAATAGGGA+TGG + Chr2:9987929-9987948 MsG0280007053.01.T01:intron 35.0%
TGAATGGAAGTAAGAAACTG+TGG - Chr2:9986394-9986413 None:intergenic 35.0%
TGAGGAGAGAATGAAGAAAA+CGG - Chr2:9983244-9983263 None:intergenic 35.0%
TGGCTGATATAAGAAATGGA+CGG - Chr2:9984975-9984994 None:intergenic 35.0%
TTAAATCTAGGCCACACATT+AGG - Chr2:9989558-9989577 None:intergenic 35.0%
TTAATTGTAACAAGTGGAGC+CGG + Chr2:9986060-9986079 MsG0280007053.01.T01:intron 35.0%
TTAGAAAGAGAGATCAGAAC+AGG + Chr2:9988416-9988435 MsG0280007053.01.T01:intron 35.0%
TTATTTGATGCAGAAGCAGA+AGG - Chr2:9984311-9984330 None:intergenic 35.0%
TTCTGCTTCTGCATCAAATA+AGG + Chr2:9984310-9984329 MsG0280007053.01.T01:CDS 35.0%
! AAAAGTACACTTTCGGACAT+TGG + Chr2:9989662-9989681 MsG0280007053.01.T01:three_prime_UTR 35.0%
! AAGAAGGTATACATGCCATA+AGG - Chr2:9985549-9985568 None:intergenic 35.0%
! AATCTAAGATATACTGGTGG+TGG - Chr2:9985434-9985453 None:intergenic 35.0%
! ACTTGGCATTTTCATCACTA+TGG + Chr2:9984860-9984879 MsG0280007053.01.T01:intron 35.0%
! ATGTTTTCTCCTAATGATCC+AGG - Chr2:9983689-9983708 None:intergenic 35.0%
! ATTGTCATTTCCATTGCATC+TGG + Chr2:9989509-9989528 MsG0280007053.01.T01:three_prime_UTR 35.0%
! CCTCTTTCTCATTTCTTTTG+TGG + Chr2:9987746-9987765 MsG0280007053.01.T01:intron 35.0%
! CTCAATGTTAGGAGTGTAAT+AGG + Chr2:9985816-9985835 MsG0280007053.01.T01:intron 35.0%
! CTCCACTTGTTACAATTAAC+AGG - Chr2:9986059-9986078 None:intergenic 35.0%
! CTTGGCATTTTCATCACTAT+GGG + Chr2:9984861-9984880 MsG0280007053.01.T01:intron 35.0%
! GAAGATAACAAGGGTTTTCT+GGG + Chr2:9988961-9988980 MsG0280007053.01.T01:CDS 35.0%
! GACATCCCTATATGGATTAT+TGG + Chr2:9988637-9988656 MsG0280007053.01.T01:intron 35.0%
! GTATATTCCATTCTGGAGAA+AGG - Chr2:9983187-9983206 None:intergenic 35.0%
! TATAGACGGAGAGAGTATAT+AGG - Chr2:9982916-9982935 None:intergenic 35.0%
! TATATTTGGAGCTTCAATGG+CGG + Chr2:9987325-9987344 MsG0280007053.01.T01:CDS 35.0%
! TCCCTATATGGATTATTGGT+TGG + Chr2:9988641-9988660 MsG0280007053.01.T01:intron 35.0%
! TGAAGATAACAAGGGTTTTC+TGG + Chr2:9988960-9988979 MsG0280007053.01.T01:CDS 35.0%
! TGCTATATTTGGAGCTTCAA+TGG + Chr2:9987322-9987341 MsG0280007053.01.T01:CDS 35.0%
! TTGATGAGAGATAATGGTCA+AGG - Chr2:9987048-9987067 None:intergenic 35.0%
! TTGGCATTTTCATCACTATG+GGG + Chr2:9984862-9984881 MsG0280007053.01.T01:intron 35.0%
! TTGGTTGGTGTTTGAACATT+AGG + Chr2:9988656-9988675 MsG0280007053.01.T01:intron 35.0%
! TTGTCATTTCCATTGCATCT+GGG + Chr2:9989510-9989529 MsG0280007053.01.T01:three_prime_UTR 35.0%
!! AGAAGTATACTTTAGGGCAT+TGG + Chr2:9989705-9989724 MsG0280007053.01.T01:three_prime_UTR 35.0%
!! GAAGTATACTTTAGGGCATT+GGG + Chr2:9989706-9989725 MsG0280007053.01.T01:three_prime_UTR 35.0%
!! TTATGGAAGCATTACAAGCA+TGG - Chr2:9987536-9987555 None:intergenic 35.0%
!!! AGCATTGGTAGAAGTTTTCT+CGG + Chr2:9985277-9985296 MsG0280007053.01.T01:intron 35.0%
!!! ATTGCTGCATTGGCTTTTAT+TGG + Chr2:9986653-9986672 MsG0280007053.01.T01:CDS 35.0%
!!! CTCATGTTGTTTTGTTTCCA+TGG + Chr2:9986583-9986602 MsG0280007053.01.T01:CDS 35.0%
!!! CTTTTCAAGTGATGTCTAAG+AGG - Chr2:9985078-9985097 None:intergenic 35.0%
!!! GCCTCCTATGTTATTTTACT+AGG + Chr2:9987182-9987201 MsG0280007053.01.T01:intron 35.0%
!!! TCTGTTTTTATGGGTAAGAC+AGG + Chr2:9987389-9987408 MsG0280007053.01.T01:intron 35.0%
!!! TGTATTTTGATCAATTGGCG+GGG - Chr2:9987905-9987924 None:intergenic 35.0%
!!! TTTTAGGTTGAACATGGAAC+TGG - Chr2:9986789-9986808 None:intergenic 35.0%
AAAACAAACCCTCTTGTGGT+TGG - Chr2:9989256-9989275 None:intergenic 40.0%
AACAACATGAGGTCAAGAGT+TGG - Chr2:9986574-9986593 None:intergenic 40.0%
AACAGAGTGTACTTGTTCTG+TGG + Chr2:9988837-9988856 MsG0280007053.01.T01:intron 40.0%
AACGTCTCATCTTTATGGTG+TGG + Chr2:9988499-9988518 MsG0280007053.01.T01:intron 40.0%
AAGACAAGAACGAGAAGTCA+TGG - Chr2:9983291-9983310 None:intergenic 40.0%
AAGGGAATCCTGAAAGAAGT+AGG + Chr2:9986091-9986110 MsG0280007053.01.T01:intron 40.0%
AATCCTGAAAGAAGTAGGGA+AGG + Chr2:9986096-9986115 MsG0280007053.01.T01:intron 40.0%
AATTAAGGGCTCAGTTACCA+AGG + Chr2:9988035-9988054 MsG0280007053.01.T01:intron 40.0%
AATTCCTTAGAGGCAAAGCA+TGG - Chr2:9984531-9984550 None:intergenic 40.0%
ACAATTGCATTTGCAGCAGT+CGG + Chr2:9985203-9985222 MsG0280007053.01.T01:intron 40.0%
AGCTTAAGCTTCTACTCTGT+TGG - Chr2:9982759-9982778 None:intergenic 40.0%
AGGGAATCCTGAAAGAAGTA+GGG + Chr2:9986092-9986111 MsG0280007053.01.T01:intron 40.0%
AGGGCATGTGTTAAAGGATT+GGG - Chr2:9985939-9985958 None:intergenic 40.0%
AGTAATATGTCAGCAGGGTA+GGG - Chr2:9985958-9985977 None:intergenic 40.0%
ATAGGGATGTCAATAAGGCA+GGG - Chr2:9988628-9988647 None:intergenic 40.0%
ATATAAGAAATGGACGGGTC+AGG - Chr2:9984969-9984988 None:intergenic 40.0%
ATCCTGAAAGAAGTAGGGAA+GGG + Chr2:9986097-9986116 MsG0280007053.01.T01:intron 40.0%
ATCTGTCCTTCGATACCTAA+TGG + Chr2:9988761-9988780 MsG0280007053.01.T01:intron 40.0%
ATGAGGAAAATAATCCCCCA+TGG + Chr2:9988556-9988575 MsG0280007053.01.T01:intron 40.0%
ATTCCAGAGGAATTAGTAGC+GGG - Chr2:9987472-9987491 None:intergenic 40.0%
CAATGTACTTGGGTTCACAA+TGG - Chr2:9989343-9989362 None:intergenic 40.0%
CAGTTGTCACAAGTTAGAAG+GGG + Chr2:9987117-9987136 MsG0280007053.01.T01:intron 40.0%
CCAGTTGTCACAAGTTAGAA+GGG + Chr2:9987116-9987135 MsG0280007053.01.T01:intron 40.0%
CTCTCAACGTCTCATCTTTA+TGG + Chr2:9988494-9988513 MsG0280007053.01.T01:intron 40.0%
GAAGAAGAATACCTTCACGA+TGG - Chr2:9983423-9983442 None:intergenic 40.0%
GAGAAAACTTCTACCAATGC+TGG - Chr2:9985278-9985297 None:intergenic 40.0%
GAGAAGAGGAAGAATAAACG+AGG - Chr2:9983388-9983407 None:intergenic 40.0%
GAGGAATGATTAGAAAAGGG+GGG + Chr2:9986165-9986184 MsG0280007053.01.T01:intron 40.0%
GAGGATTCTTATCCATCGAT+AGG + Chr2:9988156-9988175 MsG0280007053.01.T01:intron 40.0%
GAGGGAGGAATGATTAGAAA+AGG + Chr2:9986161-9986180 MsG0280007053.01.T01:intron 40.0%
GATCAGAATAGGGGATATTG+TGG + Chr2:9986189-9986208 MsG0280007053.01.T01:intron 40.0%
GCAATGGAAATGACAATGTG+TGG - Chr2:9989506-9989525 None:intergenic 40.0%
GCCAGCAAAAGAAACCAAAA+TGG - Chr2:9984995-9985014 None:intergenic 40.0%
GCTGTACTTCCAATATGTTC+TGG + Chr2:9986686-9986705 MsG0280007053.01.T01:CDS 40.0%
GGAGGAATGATTAGAAAAGG+GGG + Chr2:9986164-9986183 MsG0280007053.01.T01:intron 40.0%
GGCTGATATAAGAAATGGAC+GGG - Chr2:9984974-9984993 None:intergenic 40.0%
GGGAGGAATGATTAGAAAAG+GGG + Chr2:9986163-9986182 MsG0280007053.01.T01:intron 40.0%
GGGGAAAAATTCCTTGACTT+TGG - Chr2:9988237-9988256 None:intergenic 40.0%
GGTTAAATAATATGGGACGG+AGG + Chr2:9983140-9983159 MsG0280007053.01.T01:intron 40.0%
GTCACGGTGACATTAAATCT+AGG - Chr2:9989570-9989589 None:intergenic 40.0%
GTCACGTGAAACTTCTCATA+CGG + Chr2:9989142-9989161 MsG0280007053.01.T01:three_prime_UTR 40.0%
GTGAAACTCTCATACTTACC+TGG + Chr2:9989205-9989224 MsG0280007053.01.T01:three_prime_UTR 40.0%
TAAACCCCTCCAATGATTCT+TGG - Chr2:9985255-9985274 None:intergenic 40.0%
TAAAGATGAGACGTTGAGAG+CGG - Chr2:9988494-9988513 None:intergenic 40.0%
TAGATTCAACTAGCGAACTG+CGG + Chr2:9982560-9982579 MsG0280007053.01.T01:CDS 40.0%
TAGGGCATGTGTTAAAGGAT+TGG - Chr2:9985940-9985959 None:intergenic 40.0%
TAGTAATATGTCAGCAGGGT+AGG - Chr2:9985959-9985978 None:intergenic 40.0%
TATAGGGATGTCAATAAGGC+AGG - Chr2:9988629-9988648 None:intergenic 40.0%
TATGTTTCTCATCACCGTTG+CGG + Chr2:9989783-9989802 MsG0280007053.01.T01:three_prime_UTR 40.0%
TATTATCTTGCGTGAACGTG+AGG + Chr2:9983474-9983493 MsG0280007053.01.T01:CDS 40.0%
TGAACACCTTGGCAAATCAA+TGG - Chr2:9982680-9982699 None:intergenic 40.0%
TGAGAGCTGTTAAGAGTTCA+AGG - Chr2:9988446-9988465 None:intergenic 40.0%
TTATTCTTCCTCTTCTCGCT+TGG + Chr2:9983391-9983410 MsG0280007053.01.T01:intron 40.0%
TTTACCATGCTTTGCCTCTA+AGG + Chr2:9984524-9984543 MsG0280007053.01.T01:intron 40.0%
! ATATTTGGAGCTTCAATGGC+GGG + Chr2:9987326-9987345 MsG0280007053.01.T01:CDS 40.0%
! ATTGGTAGAAGTTTTCTCGG+AGG + Chr2:9985280-9985299 MsG0280007053.01.T01:intron 40.0%
! ATTTTCCGCTACTCGATGAT+TGG + Chr2:9984192-9984211 MsG0280007053.01.T01:CDS 40.0%
! GAGAGAGTATATAGGAAGGA+GGG - Chr2:9982908-9982927 None:intergenic 40.0%
! GCCATTGTTGCTTGATAACA+TGG - Chr2:9985056-9985075 None:intergenic 40.0%
! GCCTTATTGACATCCCTATA+TGG + Chr2:9988629-9988648 MsG0280007053.01.T01:intron 40.0%
! GTTCGACGAAATGTTTCTAC+TGG + Chr2:9983565-9983584 MsG0280007053.01.T01:CDS 40.0%
! TCAAGGAATTTTTCCCCACA+GGG + Chr2:9988240-9988259 MsG0280007053.01.T01:intron 40.0%
! TGTACTTGCTAAGAGCCATT+AGG - Chr2:9988779-9988798 None:intergenic 40.0%
!! AAAGAGGGAATGGATTGAGA+GGG + Chr2:9986143-9986162 MsG0280007053.01.T01:intron 40.0%
!! ACCTCATCTATAGAAGTGTC+TGG + Chr2:9985167-9985186 MsG0280007053.01.T01:intron 40.0%
!! AGGTATCGAAGGACAGATTA+GGG - Chr2:9988759-9988778 None:intergenic 40.0%
!! CCTCATCTATAGAAGTGTCT+GGG + Chr2:9985168-9985187 MsG0280007053.01.T01:intron 40.0%
!! CTCATCTATAGAAGTGTCTG+GGG + Chr2:9985169-9985188 MsG0280007053.01.T01:intron 40.0%
!! CTGAAACGTTGTAGTCTTGT+TGG + Chr2:9986013-9986032 MsG0280007053.01.T01:intron 40.0%
!! TAAGAGCCATTAGGTATCGA+AGG - Chr2:9988770-9988789 None:intergenic 40.0%
!! TAGGTATCGAAGGACAGATT+AGG - Chr2:9988760-9988779 None:intergenic 40.0%
!! TCATCTGTATTGGCTTTGCT+TGG + Chr2:9989081-9989100 MsG0280007053.01.T01:CDS 40.0%
!!! GCCATTTTGGTTTCTTTTGC+TGG + Chr2:9984991-9985010 MsG0280007053.01.T01:intron 40.0%
!!! TGTTTTGTTTCCATGGGACA+TGG + Chr2:9986590-9986609 MsG0280007053.01.T01:CDS 40.0%
AAAAGGGGGGTGATCAGAAT+AGG + Chr2:9986178-9986197 MsG0280007053.01.T01:intron 45.0%
AAAGGGGGGTGATCAGAATA+GGG + Chr2:9986179-9986198 MsG0280007053.01.T01:intron 45.0%
AAATGGAGGCGGCGATAAAA+AGG - Chr2:9989015-9989034 None:intergenic 45.0%
AAGAAGAAGAAGGGAGAGAG+AGG - Chr2:9983358-9983377 None:intergenic 45.0%
AAGAAGAGAGGGCAAGTAAG+AGG - Chr2:9986487-9986506 None:intergenic 45.0%
AAGACAGGATCTTTAGCCCT+TGG + Chr2:9987404-9987423 MsG0280007053.01.T01:intron 45.0%
AAGTGTCAAAAGGCGGTAGT+TGG - Chr2:9982884-9982903 None:intergenic 45.0%
AATGGACGGGTCAGGTAAAA+AGG - Chr2:9984961-9984980 None:intergenic 45.0%
ACATTACTCCCACTACCACT+AGG + Chr2:9986524-9986543 MsG0280007053.01.T01:CDS 45.0%
ACCTCACCAAGAATCATTGG+AGG + Chr2:9985246-9985265 MsG0280007053.01.T01:intron 45.0%
ACGTCAGCAAAAACGGTTTC+GGG + Chr2:9982816-9982835 MsG0280007053.01.T01:intron 45.0%
AGAGAGAGAGAGTAGATCTG+AGG - Chr2:9983262-9983281 None:intergenic 45.0%
AGAGTCCACGTCAGCAAAAA+CGG + Chr2:9982809-9982828 MsG0280007053.01.T01:intron 45.0%
AGGAAAATAATCCCCCATGG+CGG + Chr2:9988559-9988578 MsG0280007053.01.T01:intron 45.0%
AGGGAAGAGGAAGAAGAAGA+AGG - Chr2:9983368-9983387 None:intergenic 45.0%
AGTACACTTTCGGACATTGG+TGG + Chr2:9989665-9989684 MsG0280007053.01.T01:three_prime_UTR 45.0%
CAAATCAACATCATGCACCG+GGG - Chr2:9984288-9984307 None:intergenic 45.0%
CACGTCAGCAAAAACGGTTT+CGG + Chr2:9982815-9982834 MsG0280007053.01.T01:intron 45.0%
CATACGTGACAGAGTCAACT+AGG - Chr2:9982947-9982966 None:intergenic 45.0%
CATCGATAGGGATGTCAATG+GGG + Chr2:9988169-9988188 MsG0280007053.01.T01:intron 45.0%
CCATCGATAGGGATGTCAAT+GGG + Chr2:9988168-9988187 MsG0280007053.01.T01:intron 45.0%
CCCAGACACTTCTATAGATG+AGG - Chr2:9985171-9985190 None:intergenic 45.0%
CCTCACCAAGAATCATTGGA+GGG + Chr2:9985247-9985266 MsG0280007053.01.T01:intron 45.0%
CCTTGGCAAATCAATGGACA+TGG - Chr2:9982674-9982693 None:intergenic 45.0%
CTAGAACACCAACCACAAGA+GGG + Chr2:9989245-9989264 MsG0280007053.01.T01:three_prime_UTR 45.0%
CTCACCAAGAATCATTGGAG+GGG + Chr2:9985248-9985267 MsG0280007053.01.T01:intron 45.0%
GATACTACACAGGTAGCTGT+TGG + Chr2:9985480-9985499 MsG0280007053.01.T01:intron 45.0%
GCAAATCAACATCATGCACC+GGG - Chr2:9984289-9984308 None:intergenic 45.0%
GCCAGCATATCTTCACCTTA+TGG + Chr2:9985531-9985550 MsG0280007053.01.T01:intron 45.0%
GCCAGTTGTCACAAGTTAGA+AGG + Chr2:9987115-9987134 MsG0280007053.01.T01:intron 45.0%
GCCATAAGGTGAAGATATGC+TGG - Chr2:9985535-9985554 None:intergenic 45.0%
GCGTAAAACAAACCCTCTTG+TGG - Chr2:9989260-9989279 None:intergenic 45.0%
GGAAGAATAAACGAGGGAAG+AGG - Chr2:9983381-9983400 None:intergenic 45.0%
GGAATTAGGAGTCTTCCTCT+CGG + Chr2:9986210-9986229 MsG0280007053.01.T01:intron 45.0%
GGCAAATCAACATCATGCAC+CGG - Chr2:9984290-9984309 None:intergenic 45.0%
GGGAAGAGGAAGAAGAAGAA+GGG - Chr2:9983367-9983386 None:intergenic 45.0%
GGGCATGTGTTAAAGGATTG+GGG - Chr2:9985938-9985957 None:intergenic 45.0%
GTACACTTTCGGACATTGGT+GGG + Chr2:9989666-9989685 MsG0280007053.01.T01:three_prime_UTR 45.0%
GTCTCATCTTTATGGTGTGG+TGG + Chr2:9988502-9988521 MsG0280007053.01.T01:intron 45.0%
TCACCATACTAAATGTCGGG+TGG + Chr2:9989439-9989458 MsG0280007053.01.T01:three_prime_UTR 45.0%
TCATCTTTATGGTGTGGTGG+AGG + Chr2:9988505-9988524 MsG0280007053.01.T01:intron 45.0%
TCCATCGATAGGGATGTCAA+TGG + Chr2:9988167-9988186 MsG0280007053.01.T01:intron 45.0%
TGCAGTTAATGCACCACCAA+GGG - Chr2:9987423-9987442 None:intergenic 45.0%
TGGTGACATCTTTCTTACCC+CGG + Chr2:9984268-9984287 MsG0280007053.01.T01:CDS 45.0%
TTGCAGTTAATGCACCACCA+AGG - Chr2:9987424-9987443 None:intergenic 45.0%
! AATTTTTCCCCACAGGGATG+GGG + Chr2:9988246-9988265 MsG0280007053.01.T01:intron 45.0%
! ACCACTAGGCCTTGTGTATT+TGG + Chr2:9986538-9986557 MsG0280007053.01.T01:CDS 45.0%
! CATCTTTATGGTGTGGTGGA+GGG + Chr2:9988506-9988525 MsG0280007053.01.T01:intron 45.0%
! CCACTAGGCCTTGTGTATTT+GGG + Chr2:9986539-9986558 MsG0280007053.01.T01:CDS 45.0%
! CCCTTCTAACTTGTGACAAC+TGG - Chr2:9987119-9987138 None:intergenic 45.0%
! GAAGTTTTCTCGGAGGTGAT+TGG + Chr2:9985287-9985306 MsG0280007053.01.T01:intron 45.0%
! GAATTTTTCCCCACAGGGAT+GGG + Chr2:9988245-9988264 MsG0280007053.01.T01:intron 45.0%
! GACGGAGAGAGTATATAGGA+AGG - Chr2:9982912-9982931 None:intergenic 45.0%
! GATAACAAGGGTTTTCTGGG+AGG + Chr2:9988964-9988983 MsG0280007053.01.T01:CDS 45.0%
! GGAGAGAGTATATAGGAAGG+AGG - Chr2:9982909-9982928 None:intergenic 45.0%
! GTCAAGGAATTTTTCCCCAC+AGG + Chr2:9988239-9988258 MsG0280007053.01.T01:intron 45.0%
! TCTAGAACACCAACCACAAG+AGG + Chr2:9989244-9989263 MsG0280007053.01.T01:three_prime_UTR 45.0%
! TCTTTTGTGGGTTCTGTGTC+AGG + Chr2:9987759-9987778 MsG0280007053.01.T01:intron 45.0%
! TGGTGGTGCATTAACTGCAA+TGG + Chr2:9987424-9987443 MsG0280007053.01.T01:intron 45.0%
! TTTTTGCTGACGTGGACTCT+TGG - Chr2:9982809-9982828 None:intergenic 45.0%
!! AGGGTGCTTTTCGTTTTGGT+TGG + Chr2:9985503-9985522 MsG0280007053.01.T01:intron 45.0%
!! CCATGTCCATTGATTTGCCA+AGG + Chr2:9982671-9982690 MsG0280007053.01.T01:CDS 45.0%
!! CTCATCGGCTTGTAACCATT+GGG + Chr2:9984351-9984370 MsG0280007053.01.T01:CDS 45.0%
!! GAAAGAGGGAATGGATTGAG+AGG + Chr2:9986142-9986161 MsG0280007053.01.T01:intron 45.0%
!! GAAGGAGGGAAAGTGTCAAA+AGG - Chr2:9982894-9982913 None:intergenic 45.0%
!! TCTGTATTGGCTTTGCTTGG+CGG + Chr2:9989084-9989103 MsG0280007053.01.T01:CDS 45.0%
!!! TTGGAGGGTGCTTTTCGTTT+TGG + Chr2:9985499-9985518 MsG0280007053.01.T01:intron 45.0%
!!! GAATTTATTTTAAAAATAAT+GGG + Chr2:9984546-9984565 MsG0280007053.01.T01:intron 5.0%
AAAATGGAACCCTGACCGAG+AGG - Chr2:9986228-9986247 None:intergenic 50.0%
AACAAGTGGAGCCGGAAGAA+GGG + Chr2:9986068-9986087 MsG0280007053.01.T01:intron 50.0%
AAGGGGGGTGATCAGAATAG+GGG + Chr2:9986180-9986199 MsG0280007053.01.T01:intron 50.0%
AATGTGTGGCCCAGATGCAA+TGG - Chr2:9989492-9989511 None:intergenic 50.0%
ACACAAGGCCTAGTGGTAGT+GGG - Chr2:9986535-9986554 None:intergenic 50.0%
ACAGGATCTTTAGCCCTTGG+TGG + Chr2:9987407-9987426 MsG0280007053.01.T01:intron 50.0%
ACTACACAGGTAGCTGTTGG+AGG + Chr2:9985483-9985502 MsG0280007053.01.T01:intron 50.0%
ACTGCAATGGCTGCATGTAC+TGG + Chr2:9987437-9987456 MsG0280007053.01.T01:intron 50.0%
AGAGACGGAGAGGGAGATTT+CGG - Chr2:9983322-9983341 None:intergenic 50.0%
AGCCCTTCCCTACTTCTTTC+AGG - Chr2:9986102-9986121 None:intergenic 50.0%
AGGATTCCCTTCCCTTCTTC+CGG - Chr2:9986082-9986101 None:intergenic 50.0%
AGGGATTTGATGGGGATCTG+TGG + Chr2:9988525-9988544 MsG0280007053.01.T01:intron 50.0%
AGGGCTCAGTTACCAAGGTT+TGG + Chr2:9988040-9988059 MsG0280007053.01.T01:intron 50.0%
AGTGACGGCGAAGACTTTGA+TGG + Chr2:9984248-9984267 MsG0280007053.01.T01:CDS 50.0%
ATCAAAGTCTTCGCCGTCAC+TGG - Chr2:9984249-9984268 None:intergenic 50.0%
ATGACTCGCTAGAGCCTTCA+AGG - Chr2:9984084-9984103 None:intergenic 50.0%
ATTCTTGTGTCCCCTCCCAA+TGG - Chr2:9984369-9984388 None:intergenic 50.0%
CAGGGTAGGGCATGTGTTAA+AGG - Chr2:9985945-9985964 None:intergenic 50.0%
CATGCACTCGTCGTAATGTG+TGG - Chr2:9987688-9987707 None:intergenic 50.0%
CATGGGGACATGTGGAAAGA+GGG + Chr2:9986128-9986147 MsG0280007053.01.T01:intron 50.0%
CCCAAATACACAAGGCCTAG+TGG - Chr2:9986542-9986561 None:intergenic 50.0%
CCCATTGACATCCCTATCGA+TGG - Chr2:9988171-9988190 None:intergenic 50.0%
CCCTCCAATGATTCTTGGTG+AGG - Chr2:9985250-9985269 None:intergenic 50.0%
CCTACTCCTTACCAAGGTAC+CGG - Chr2:9987992-9988011 None:intergenic 50.0%
CGGTACCTTGGTAAGGAGTA+GGG + Chr2:9987990-9988009 MsG0280007053.01.T01:intron 50.0%
CTAAATGTCGGGTGGCACTT+TGG + Chr2:9989447-9989466 MsG0280007053.01.T01:three_prime_UTR 50.0%
CTACACAGGTAGCTGTTGGA+GGG + Chr2:9985484-9985503 MsG0280007053.01.T01:intron 50.0%
CTCTTTCCACATGTCCCCAT+GGG - Chr2:9986129-9986148 None:intergenic 50.0%
CTGGAGCCTTCGATGATGTA+AGG + Chr2:9983584-9983603 MsG0280007053.01.T01:intron 50.0%
CTTCCCGCTACTAATTCCTC+TGG + Chr2:9987466-9987485 MsG0280007053.01.T01:intron 50.0%
CTTTAACGGTGGCTGCTCAT+CGG + Chr2:9984336-9984355 MsG0280007053.01.T01:CDS 50.0%
GAAAAGTGGACACCCACGTT+GGG + Chr2:9985092-9985111 MsG0280007053.01.T01:intron 50.0%
GAAAATAATCCCCCATGGCG+GGG + Chr2:9988561-9988580 MsG0280007053.01.T01:intron 50.0%
GAATACGAGAGAGACGGAGA+GGG - Chr2:9983331-9983350 None:intergenic 50.0%
GCGTATGACGTACTCTCTTC+AGG - Chr2:9984221-9984240 None:intergenic 50.0%
GGAAAATAATCCCCCATGGC+GGG + Chr2:9988560-9988579 MsG0280007053.01.T01:intron 50.0%
GGACATGTGGAAAGAGGGAA+TGG + Chr2:9986133-9986152 MsG0280007053.01.T01:intron 50.0%
GGACTCCAATCATCGAGTAG+CGG - Chr2:9984200-9984219 None:intergenic 50.0%
GGAGGGGACACAAGAATCAT+AGG + Chr2:9984372-9984391 MsG0280007053.01.T01:CDS 50.0%
GGATTTGATGGGGATCTGTG+GGG + Chr2:9988527-9988546 MsG0280007053.01.T01:intron 50.0%
GGCGATGAATACGAGAGAGA+CGG - Chr2:9983337-9983356 None:intergenic 50.0%
GGCGCGAGTATATTCCATTC+TGG - Chr2:9983194-9983213 None:intergenic 50.0%
GGGATTTGATGGGGATCTGT+GGG + Chr2:9988526-9988545 MsG0280007053.01.T01:intron 50.0%
GTGCCACCCGACATTTAGTA+TGG - Chr2:9989445-9989464 None:intergenic 50.0%
GTTCTCTGAACCTGCGCAAA+TGG - Chr2:9989032-9989051 None:intergenic 50.0%
TAACAAGTGGAGCCGGAAGA+AGG + Chr2:9986067-9986086 MsG0280007053.01.T01:intron 50.0%
TACACAAGGCCTAGTGGTAG+TGG - Chr2:9986536-9986555 None:intergenic 50.0%
TACCTGGTATCCTCGCTATG+TGG + Chr2:9989221-9989240 MsG0280007053.01.T01:three_prime_UTR 50.0%
TACCTTCCGGTACCTTGGTA+AGG + Chr2:9987983-9988002 MsG0280007053.01.T01:intron 50.0%
TCATACGCCTCATCCAGTGA+CGG + Chr2:9984233-9984252 MsG0280007053.01.T01:CDS 50.0%
TCTTTCCACATGTCCCCATG+GGG - Chr2:9986128-9986147 None:intergenic 50.0%
TGAAAAGTGGACACCCACGT+TGG + Chr2:9985091-9985110 MsG0280007053.01.T01:intron 50.0%
TGAATACGAGAGAGACGGAG+AGG - Chr2:9983332-9983351 None:intergenic 50.0%
TTGGAGGGGTTTACCAGCAT+TGG + Chr2:9985262-9985281 MsG0280007053.01.T01:intron 50.0%
! GCTTGCATCGAAAGCACGTT+TGG + Chr2:9982781-9982800 MsG0280007053.01.T01:intron 50.0%
! GCTTTGCTTGGCGGATATGT+TGG + Chr2:9989093-9989112 MsG0280007053.01.T01:CDS 50.0%
! GGAATTTTTCCCCACAGGGA+TGG + Chr2:9988244-9988263 MsG0280007053.01.T01:intron 50.0%
! GTGTGGTGGAGGGATTTGAT+GGG + Chr2:9988516-9988535 MsG0280007053.01.T01:intron 50.0%
! GTGTTCTAGACCACATAGCG+AGG - Chr2:9989234-9989253 None:intergenic 50.0%
! TCAATGGCGGGATCTTGTGT+TGG + Chr2:9987338-9987357 MsG0280007053.01.T01:CDS 50.0%
! TCGGCTTGTAACCATTGGGA+GGG + Chr2:9984355-9984374 MsG0280007053.01.T01:CDS 50.0%
! TGTGGTGGAGGGATTTGATG+GGG + Chr2:9988517-9988536 MsG0280007053.01.T01:intron 50.0%
!! AGGGTTTTCTGGGAGGAAGT+TGG + Chr2:9988971-9988990 MsG0280007053.01.T01:CDS 50.0%
!! ATCGGCTTGTAACCATTGGG+AGG + Chr2:9984354-9984373 MsG0280007053.01.T01:CDS 50.0%
!! CGAAACCGTTTTTGCTGACG+TGG - Chr2:9982817-9982836 None:intergenic 50.0%
!! CTTGACTTTGGAGCCCCAAA+CGG - Chr2:9988225-9988244 None:intergenic 50.0%
!! GCTCATCGGCTTGTAACCAT+TGG + Chr2:9984350-9984369 MsG0280007053.01.T01:CDS 50.0%
!! GGAGGGAAAGTGTCAAAAGG+CGG - Chr2:9982891-9982910 None:intergenic 50.0%
!! TTGACTTTGGAGCCCCAAAC+GGG - Chr2:9988224-9988243 None:intergenic 50.0%
!!! AGTATTTTGGTTGGGGGCGA+GGG - Chr2:9988319-9988338 None:intergenic 50.0%
!!! TAGTATTTTGGTTGGGGGCG+AGG - Chr2:9988320-9988339 None:intergenic 50.0%
AACAGATTGAGGCACGGGGT+GGG + Chr2:9988584-9988603 MsG0280007053.01.T01:intron 55.0%
AGAACTTCAGGGACGGGGAT+CGG + Chr2:9988286-9988305 MsG0280007053.01.T01:intron 55.0%
AGCCCCAAACGGGGCAAAAA+CGG - Chr2:9988214-9988233 None:intergenic 55.0%
AGGAGTCTTCCTCTCGGTCA+GGG + Chr2:9986216-9986235 MsG0280007053.01.T01:intron 55.0%
AGGGTCCCTACTCCTTACCA+AGG - Chr2:9987998-9988017 None:intergenic 55.0%
CCATGAGAACTTCAGGGACG+GGG + Chr2:9988281-9988300 MsG0280007053.01.T01:intron 55.0%
CCATGGGGACATGTGGAAAG+AGG + Chr2:9986127-9986146 MsG0280007053.01.T01:intron 55.0%
CCCATGAGAACTTCAGGGAC+GGG + Chr2:9988280-9988299 MsG0280007053.01.T01:intron 55.0%
CCCCATGAGAACTTCAGGGA+CGG + Chr2:9988279-9988298 MsG0280007053.01.T01:intron 55.0%
CCCGTCCCTGAAGTTCTCAT+GGG - Chr2:9988283-9988302 None:intergenic 55.0%
CCGGTACCTTGGTAAGGAGT+AGG + Chr2:9987989-9988008 MsG0280007053.01.T01:intron 55.0%
CCGTCCCTGAAGTTCTCATG+GGG - Chr2:9988282-9988301 None:intergenic 55.0%
CCTCTTTCCACATGTCCCCA+TGG - Chr2:9986130-9986149 None:intergenic 55.0%
CGGCTTGTAACCATTGGGAG+GGG + Chr2:9984356-9984375 MsG0280007053.01.T01:CDS 55.0%
CGTCCCTGAAGTTCTCATGG+GGG - Chr2:9988281-9988300 None:intergenic 55.0%
CTCAATCTGTTCCCCGCCAT+GGG - Chr2:9988575-9988594 None:intergenic 55.0%
CTCTGAACCTGCGCAAATGG+AGG - Chr2:9989029-9989048 None:intergenic 55.0%
CTTGGATTGCGCCATCGTGA+AGG + Chr2:9983409-9983428 MsG0280007053.01.T01:intron 55.0%
CTTTCCACATGTCCCCATGG+GGG - Chr2:9986127-9986146 None:intergenic 55.0%
GACCACATAGCGAGGATACC+AGG - Chr2:9989226-9989245 None:intergenic 55.0%
GCTCCCCCATGAGAACTTCA+GGG + Chr2:9988275-9988294 MsG0280007053.01.T01:intron 55.0%
GGATGTCAATAAGGCAGGGC+GGG - Chr2:9988624-9988643 None:intergenic 55.0%
GGGATGTCAATAAGGCAGGG+CGG - Chr2:9988625-9988644 None:intergenic 55.0%
GTTGTGTGGCCCAGATGCAA+TGG - Chr2:9989522-9989541 None:intergenic 55.0%
TAGGAGTCTTCCTCTCGGTC+AGG + Chr2:9986215-9986234 MsG0280007053.01.T01:intron 55.0%
TCAATCTGTTCCCCGCCATG+GGG - Chr2:9988574-9988593 None:intergenic 55.0%
TGAACCTGCGCAAATGGAGG+CGG - Chr2:9989026-9989045 None:intergenic 55.0%
TGAGACGTTGAGAGCGGTGA+AGG - Chr2:9988488-9988507 None:intergenic 55.0%
TGCTCCCCCATGAGAACTTC+AGG + Chr2:9988274-9988293 MsG0280007053.01.T01:intron 55.0%
TGGAGGCGGCGATAAAAAGG+TGG - Chr2:9989012-9989031 None:intergenic 55.0%
TGTGCTACCTTCCGGTACCT+TGG + Chr2:9987978-9987997 MsG0280007053.01.T01:intron 55.0%
TTGATGGGGATCTGTGGGGA+CGG + Chr2:9988531-9988550 MsG0280007053.01.T01:intron 55.0%
! CGTTTGGGGCTCCAAAGTCA+AGG + Chr2:9988223-9988242 MsG0280007053.01.T01:intron 55.0%
! GGTGTGGTGGAGGGATTTGA+TGG + Chr2:9988515-9988534 MsG0280007053.01.T01:intron 55.0%
! GTCACCGTGCCATTGCATCT+GGG + Chr2:9989480-9989499 MsG0280007053.01.T01:three_prime_UTR 55.0%
! TGTCACCGTGCCATTGCATC+TGG + Chr2:9989479-9989498 MsG0280007053.01.T01:three_prime_UTR 55.0%
!! CTCCTTACCAAGGTACCGGA+AGG - Chr2:9987988-9988007 None:intergenic 55.0%
!! GAGGGAATGGATTGAGAGGG+AGG + Chr2:9986146-9986165 MsG0280007053.01.T01:intron 55.0%
!! GATGCTCTTGATGGACTCGC+TGG + Chr2:9986626-9986645 MsG0280007053.01.T01:CDS 55.0%
!! TCCCCGTTTTTGCCCCGTTT+GGG + Chr2:9988208-9988227 MsG0280007053.01.T01:intron 55.0%
!! TGACTTTGGAGCCCCAAACG+GGG - Chr2:9988223-9988242 None:intergenic 55.0%
AACTTCAGGGACGGGGATCG+GGG + Chr2:9988288-9988307 MsG0280007053.01.T01:intron 60.0%
AAGTGGACACCCACGTTGGG+TGG + Chr2:9985095-9985114 MsG0280007053.01.T01:intron 60.0%
AGCATTCCACCCCATCCCTG+TGG - Chr2:9988258-9988277 None:intergenic 60.0%
AGGGAAGGGCTAACCCCCAT+GGG + Chr2:9986111-9986130 MsG0280007053.01.T01:intron 60.0%
AGTGGAGCCGGAAGAAGGGA+AGG + Chr2:9986072-9986091 MsG0280007053.01.T01:intron 60.0%
CAATCTGTTCCCCGCCATGG+GGG - Chr2:9988573-9988592 None:intergenic 60.0%
CATTCCACCCCATCCCTGTG+GGG - Chr2:9988256-9988275 None:intergenic 60.0%
CCCCAAACGGGGCAAAAACG+GGG - Chr2:9988212-9988231 None:intergenic 60.0%
CCCCGTCCCTGAAGTTCTCA+TGG - Chr2:9988284-9988303 None:intergenic 60.0%
CCTCAATCTGTTCCCCGCCA+TGG - Chr2:9988576-9988595 None:intergenic 60.0%
CGGGGAACAGATTGAGGCAC+GGG + Chr2:9988579-9988598 MsG0280007053.01.T01:intron 60.0%
CTAACCCCCATGGGGACATG+TGG + Chr2:9986120-9986139 MsG0280007053.01.T01:intron 60.0%
GAACAGATTGAGGCACGGGG+TGG + Chr2:9988583-9988602 MsG0280007053.01.T01:intron 60.0%
GAACTTCAGGGACGGGGATC+GGG + Chr2:9988287-9988306 MsG0280007053.01.T01:intron 60.0%
GACGGAGAGGGAGATTTCGG+TGG - Chr2:9983319-9983338 None:intergenic 60.0%
GCATTCCACCCCATCCCTGT+GGG - Chr2:9988257-9988276 None:intergenic 60.0%
GCCCCAAACGGGGCAAAAAC+GGG - Chr2:9988213-9988232 None:intergenic 60.0%
GCGGGGAACAGATTGAGGCA+CGG + Chr2:9988578-9988597 MsG0280007053.01.T01:intron 60.0%
GGCGCAATCCAAGCGAGAAG+AGG - Chr2:9983402-9983421 None:intergenic 60.0%
GGGGAACAGATTGAGGCACG+GGG + Chr2:9988580-9988599 MsG0280007053.01.T01:intron 60.0%
GTCTTCGCCGTCACTGGATG+AGG - Chr2:9984243-9984262 None:intergenic 60.0%
GTGGAGCCGGAAGAAGGGAA+GGG + Chr2:9986073-9986092 MsG0280007053.01.T01:intron 60.0%
GTGGCCCAGATGCAATGGCA+CGG - Chr2:9989487-9989506 None:intergenic 60.0%
TAGGGAAGGGCTAACCCCCA+TGG + Chr2:9986110-9986129 MsG0280007053.01.T01:intron 60.0%
TGATGGGGATCTGTGGGGAC+GGG + Chr2:9988532-9988551 MsG0280007053.01.T01:intron 60.0%
TTGAGGCACGGGGTGGGTAA+CGG + Chr2:9988590-9988609 MsG0280007053.01.T01:intron 60.0%
! CCATGGCGGGGAACAGATTG+AGG + Chr2:9988573-9988592 MsG0280007053.01.T01:intron 60.0%
! TTTTCCCCACAGGGATGGGG+TGG + Chr2:9988249-9988268 MsG0280007053.01.T01:intron 60.0%
!! CCCCGTTTTTGCCCCGTTTG+GGG + Chr2:9988209-9988228 MsG0280007053.01.T01:intron 60.0%
!! CGCTGGAGGCATTGCTGCAT+TGG + Chr2:9986643-9986662 MsG0280007053.01.T01:CDS 60.0%
!! CTCCCCGTTTTTGCCCCGTT+TGG + Chr2:9988207-9988226 MsG0280007053.01.T01:intron 60.0%
!! GCTCTTGATGGACTCGCTGG+AGG + Chr2:9986629-9986648 MsG0280007053.01.T01:CDS 60.0%
ATCGCCGCCTCCATTTGCGC+AGG + Chr2:9989019-9989038 MsG0280007053.01.T01:CDS 65.0%
GATCTGTGGGGACGGGGATG+AGG + Chr2:9988539-9988558 MsG0280007053.01.T01:intron 65.0%
GATGGGGATCTGTGGGGACG+GGG + Chr2:9988533-9988552 MsG0280007053.01.T01:intron 65.0%
GGGAAGGGCTAACCCCCATG+GGG + Chr2:9986112-9986131 MsG0280007053.01.T01:intron 65.0%
TGAGGCACGGGGTGGGTAAC+GGG + Chr2:9988591-9988610 MsG0280007053.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 9982511 9989896 9982511 ID=MsG0280007053.01;Name=MsG0280007053.01
Chr2 mRNA 9982511 9989896 9982511 ID=MsG0280007053.01.T01;Parent=MsG0280007053.01;Name=MsG0280007053.01.T01;_AED=0.54;_eAED=0.54;_QI=0|0.4|0.16|0.83|0.8|0.66|6|765|345
Chr2 exon 9982511 9982692 9982511 ID=MsG0280007053.01.T01:exon:3206;Parent=MsG0280007053.01.T01
Chr2 exon 9983468 9983600 9983468 ID=MsG0280007053.01.T01:exon:3207;Parent=MsG0280007053.01.T01
Chr2 exon 9984182 9984397 9984182 ID=MsG0280007053.01.T01:exon:3208;Parent=MsG0280007053.01.T01
Chr2 exon 9986467 9986707 9986467 ID=MsG0280007053.01.T01:exon:3209;Parent=MsG0280007053.01.T01
Chr2 exon 9987318 9987401 9987318 ID=MsG0280007053.01.T01:exon:3210;Parent=MsG0280007053.01.T01
Chr2 exon 9988950 9989896 9988950 ID=MsG0280007053.01.T01:exon:3211;Parent=MsG0280007053.01.T01
Chr2 CDS 9982511 9982692 9982511 ID=MsG0280007053.01.T01:cds;Parent=MsG0280007053.01.T01
Chr2 CDS 9983468 9983600 9983468 ID=MsG0280007053.01.T01:cds;Parent=MsG0280007053.01.T01
Chr2 CDS 9984182 9984397 9984182 ID=MsG0280007053.01.T01:cds;Parent=MsG0280007053.01.T01
Chr2 CDS 9986467 9986707 9986467 ID=MsG0280007053.01.T01:cds;Parent=MsG0280007053.01.T01
Chr2 CDS 9987318 9987401 9987318 ID=MsG0280007053.01.T01:cds;Parent=MsG0280007053.01.T01
Chr2 CDS 9988950 9989131 9988950 ID=MsG0280007053.01.T01:cds;Parent=MsG0280007053.01.T01
Chr2 three_prime_UTR 9989132 9989896 9989132 ID=MsG0280007053.01.T01:three_prime_utr;Parent=MsG0280007053.01.T01
Gene Sequence

>MsG0280007053.01.T01

ATGCTGAAGCTGAACGACAGAGAGAAGCAACAGTTTATTTATGTCATGCTAGATTCAACTAGCGAACTGCGGCACACAGTATTTGTAGCAAATGGGAACAAAACACAACTACGACAAAGACTAGAAAACAAGTACACAAGTACACATGGAACGTGTATCACCATGTCCATTGATTTGCCAAGATTTATTATTATCTTGCGTGAACGTGAGGTGTTAATTATTTTATTCTTCAATGTTCTGCAGTTACAATCATCCGTTATTCAACAATACAGCTCATGTGTTCGACGAAATGTTTCTACTGGAGCCTTCGATGATGATTCATTTGATTTTCCGCTACTCGATGATTGGAGTCCTGAAGAGAGTACGTCATACGCCTCATCCAGTGACGGCGAAGACTTTGATGGTGACATCTTTCTTACCCCGGTGCATGATGTTGATTTGCCTTCTGCTTCTGCATCAAATAAGGATGCTTTAACGGTGGCTGCTCATCGGCTTGTAACCATTGGGAGGGGACACAAGAATCATAGGCAAGCAACAGATCATTTATTCCTCTTACTTGCCCTCTCTTCTTTACTTACATGCAGGAAGACATTACTCCCACTACCACTAGGCCTTGTGTATTTGGGACGATATTACCAACTCTTGACCTCATGTTGTTTTGTTTCCATGGGACATGGTGTTAAATTAGCAGATGCTCTTGATGGACTCGCTGGAGGCATTGCTGCATTGGCTTTTATTGGAATGTCAATAGCTGTACTTCCAATATGTTCTGAGCTTGCTATATTTGGAGCTTCAATGGCGGGATCTTGTGTTGGATTTCTTCTACACAACAGATACAAAGCATCTGTTTTTATGGGTATTGTACTTGAAGATAACAAGGGTTTTCTGGGAGGAAGTTGGCACTTTTTGAGAATGCCACCTTTTTATCGCCGCCTCCATTTGCGCAGGTTCAGAGAACCAAATATTGTACTAGGTGCATATCTGATTTCATCTGTATTGGCTTTGCTTGGCGGATATGTTGGTCTTATTTCAGCATAA
Protein sequence

>MsG0280007053.01.T01

MLKLNDREKQQFIYVMLDSTSELRHTVFVANGNKTQLRQRLENKYTSTHGTCITMSIDLPRFIIILREREVLIILFFNVLQLQSSVIQQYSSCVRRNVSTGAFDDDSFDFPLLDDWSPEESTSYASSSDGEDFDGDIFLTPVHDVDLPSASASNKDALTVAAHRLVTIGRGHKNHRQATDHLFLLLALSSLLTCRKTLLPLPLGLVYLGRYYQLLTSCCFVSMGHGVKLADALDGLAGGIAALAFIGMSIAVLPICSELAIFGASMAGSCVGFLLHNRYKASVFMGIVLEDNKGFLGGSWHFLRMPPFYRRLHLRRFREPNIVLGAYLISSVLALLGGYVGLISA*