AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007676.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007676.01.T01 MTR_2g029730 93.043 345 24 0 1 345 1 345 0.0 657
MsG0280007676.01.T01 MTR_2g029560 84.058 345 54 1 1 345 1 344 0.0 592
MsG0280007676.01.T01 MTR_2g029820 64.045 356 116 3 1 345 1 355 1.76e-162 458
MsG0280007676.01.T01 MTR_2g029740 65.882 340 110 2 1 335 1 339 3.54e-160 452
MsG0280007676.01.T01 MTR_2g029815 64.589 353 116 3 1 345 1 352 8.61e-160 451
MsG0280007676.01.T01 MTR_2g029800 65.407 344 110 3 11 345 10 353 3.14e-159 450
MsG0280007676.01.T01 MTR_2g029830 66.566 332 104 1 8 332 4 335 6.86e-159 449
MsG0280007676.01.T01 MTR_2g029750 65.861 331 108 1 7 332 6 336 1.50e-156 443
MsG0280007676.01.T01 MTR_2g029850 64.407 354 115 4 1 345 1 352 7.66e-155 439
MsG0280007676.01.T01 MTR_2g029860 64.826 344 112 3 11 345 10 353 2.83e-151 429
MsG0280007676.01.T01 MTR_2g028980 63.205 337 118 2 1 332 1 336 1.86e-150 427
MsG0280007676.01.T01 MTR_2g029910 62.391 343 121 3 11 345 11 353 2.42e-149 425
MsG0280007676.01.T01 MTR_2g029830 72.243 263 73 0 70 332 5 267 6.17e-137 390
MsG0280007676.01.T01 MTR_7g093370 56.869 313 134 1 16 327 60 372 7.03e-121 353
MsG0280007676.01.T01 MTR_1g054205 53.560 323 149 1 6 327 5 327 2.48e-118 345
MsG0280007676.01.T01 MTR_5g021060 51.155 303 147 1 24 326 29 330 2.86e-110 325
MsG0280007676.01.T01 MTR_4g125940 54.276 304 135 2 25 326 28 329 2.20e-108 320
MsG0280007676.01.T01 MTR_8g076820 49.175 303 153 1 24 326 29 330 6.81e-107 316
MsG0280007676.01.T01 MTR_5g017860 51.839 299 140 3 29 326 31 326 2.63e-103 306
MsG0280007676.01.T01 MTR_5g017850 51.171 299 142 3 29 326 31 326 2.76e-102 304
MsG0280007676.01.T01 MTR_4g125940 56.727 275 115 2 54 326 2 274 3.20e-102 302
MsG0280007676.01.T01 MTR_5g074970 46.847 333 161 5 1 326 3 326 4.58e-101 301
MsG0280007676.01.T01 MTR_1g022970 48.675 302 155 0 25 326 46 347 1.06e-100 301
MsG0280007676.01.T01 MTR_2g040000 49.836 305 148 2 25 326 29 331 8.62e-100 298
MsG0280007676.01.T01 MTR_3g466200 47.040 321 157 5 10 326 9 320 5.07e-96 288
MsG0280007676.01.T01 MTR_4g029200 48.525 305 148 2 22 326 43 338 1.15e-95 288
MsG0280007676.01.T01 MTR_4g122640 46.037 328 167 3 6 326 12 336 2.99e-95 286
MsG0280007676.01.T01 MTR_3g094650 50.331 302 139 3 23 322 26 318 7.27e-94 283
MsG0280007676.01.T01 MTR_7g072510 46.689 302 152 2 25 326 20 312 3.10e-93 280
MsG0280007676.01.T01 MTR_4g029190 47.531 324 158 5 6 326 26 340 4.26e-93 281
MsG0280007676.01.T01 MTR_5g083860 47.697 304 148 3 25 326 31 325 2.45e-92 279
MsG0280007676.01.T01 MTR_7g072480 47.368 304 151 2 23 326 22 316 1.23e-91 276
MsG0280007676.01.T01 MTR_2g084110 47.651 298 147 2 29 326 29 317 1.54e-91 276
MsG0280007676.01.T01 MTR_5g074760 48.208 307 148 5 25 328 25 323 1.62e-91 276
MsG0280007676.01.T01 MTR_2g084080 47.315 298 148 2 29 326 29 317 5.62e-91 275
MsG0280007676.01.T01 MTR_4g083710 45.921 331 167 5 1 326 1 324 9.73e-91 275
MsG0280007676.01.T01 MTR_5g014100 46.774 310 161 2 21 326 22 331 4.81e-90 273
MsG0280007676.01.T01 MTR_3g072190 45.695 302 155 2 25 326 26 318 9.76e-90 272
MsG0280007676.01.T01 MTR_5g074710 45.593 329 168 5 1 326 1 321 1.21e-88 269
MsG0280007676.01.T01 MTR_5g074740 47.213 305 150 5 25 326 25 321 5.27e-88 268
MsG0280007676.01.T01 MTR_5g049280 44.304 316 165 6 18 326 26 337 6.65e-88 268
MsG0280007676.01.T01 MTR_5g074860 47.712 306 149 5 23 325 27 324 1.38e-87 266
MsG0280007676.01.T01 MTR_3g094670 47.022 319 157 4 6 322 10 318 2.72e-87 266
MsG0280007676.01.T01 MTR_2g084020 46.309 298 152 2 29 326 29 318 4.40e-87 265
MsG0280007676.01.T01 MTR_2g084090 45.574 305 156 3 23 326 23 318 7.98e-87 265
MsG0280007676.01.T01 MTR_4g029170 44.828 319 163 5 11 326 13 321 1.34e-86 264
MsG0280007676.01.T01 MTR_2g084010 45.724 304 157 2 23 326 23 318 5.69e-86 262
MsG0280007676.01.T01 MTR_4g133800 45.333 300 149 7 30 326 46 333 9.89e-86 262
MsG0280007676.01.T01 MTR_4g029180 46.667 300 149 4 29 326 31 321 2.70e-85 261
MsG0280007676.01.T01 MTR_3g094630 47.284 313 154 3 16 326 19 322 5.52e-85 260
MsG0280007676.01.T01 MTR_4g074995 46.254 307 142 4 23 326 22 308 1.31e-84 258
MsG0280007676.01.T01 MTR_1g115900 44.918 305 157 5 25 327 27 322 2.52e-84 258
MsG0280007676.01.T01 MTR_2g084000 44.737 304 160 3 23 326 24 319 3.35e-84 258
MsG0280007676.01.T01 MTR_7g026990 44.040 302 153 5 29 327 35 323 1.82e-82 253
MsG0280007676.01.T01 MTR_4g030890 44.040 302 164 3 25 326 100 396 9.60e-82 254
MsG0280007676.01.T01 MTR_2g008710 44.702 302 156 5 29 326 31 325 1.27e-81 251
MsG0280007676.01.T01 MTR_2g088770 43.322 307 168 5 22 326 23 325 1.82e-81 251
MsG0280007676.01.T01 MTR_2g437770 44.079 304 158 6 25 327 50 342 9.30e-81 249
MsG0280007676.01.T01 MTR_4g031140 42.395 309 171 4 25 332 28 330 6.52e-80 248
MsG0280007676.01.T01 MTR_4g046713 40.673 327 190 3 1 326 3 326 1.18e-79 246
MsG0280007676.01.T01 MTR_6g043280 42.202 327 165 7 11 326 19 332 2.54e-79 246
MsG0280007676.01.T01 MTR_7g107520 42.991 321 176 5 6 326 7 320 3.14e-79 245
MsG0280007676.01.T01 MTR_4g074990 43.648 307 147 4 23 326 22 305 1.88e-78 243
MsG0280007676.01.T01 MTR_3g466180 43.377 302 162 2 25 326 31 323 5.20e-78 242
MsG0280007676.01.T01 MTR_6g043240 42.947 319 166 7 25 341 42 346 9.49e-78 242
MsG0280007676.01.T01 MTR_1g086320 43.046 302 166 3 29 326 34 333 9.64e-78 242
MsG0280007676.01.T01 MTR_1g038680 43.894 303 162 5 29 326 33 332 9.76e-78 241
MsG0280007676.01.T01 MTR_3g467600 42.138 318 174 3 12 326 14 324 1.08e-77 241
MsG0280007676.01.T01 MTR_4g114210 42.395 309 162 6 25 326 21 320 3.36e-77 240
MsG0280007676.01.T01 MTR_2g029880 59.242 211 74 3 137 345 9 209 1.40e-76 234
MsG0280007676.01.T01 MTR_5g022870 40.061 327 184 8 1 326 1 316 2.37e-76 238
MsG0280007676.01.T01 MTR_3g092990 40.252 318 187 2 10 326 11 326 2.42e-76 238
MsG0280007676.01.T01 MTR_1g086490 39.766 342 188 5 1 326 1 340 5.13e-76 238
MsG0280007676.01.T01 MTR_8g075100 42.244 303 165 7 25 326 26 319 1.23e-75 236
MsG0280007676.01.T01 MTR_1g025980 42.053 302 166 6 25 325 24 317 5.09e-75 234
MsG0280007676.01.T01 MTR_1g101830 40.397 302 174 4 25 326 27 322 2.24e-74 233
MsG0280007676.01.T01 MTR_1g077000 41.060 302 165 5 25 326 39 327 3.80e-74 232
MsG0280007676.01.T01 MTR_4g087965 40.656 305 172 6 25 323 42 343 1.47e-72 229
MsG0280007676.01.T01 MTR_0155s0040 38.580 324 185 6 3 326 6 315 1.93e-72 228
MsG0280007676.01.T01 MTR_4g074980 42.105 304 144 5 23 326 23 294 7.62e-72 225
MsG0280007676.01.T01 MTR_1g090760 39.414 307 181 4 23 326 26 330 5.31e-71 224
MsG0280007676.01.T01 MTR_7g029030 41.692 331 177 9 1 326 1 320 1.26e-70 223
MsG0280007676.01.T01 MTR_3g072190 43.629 259 137 2 68 326 2 251 1.53e-70 220
MsG0280007676.01.T01 MTR_7g086820 39.869 306 175 5 21 326 16 312 1.61e-70 223
MsG0280007676.01.T01 MTR_5g016010 37.764 331 197 5 1 325 1 328 3.62e-69 219
MsG0280007676.01.T01 MTR_4g074980 47.257 237 116 2 23 256 23 253 4.73e-69 217
MsG0280007676.01.T01 MTR_4g132490 37.846 325 193 5 4 326 10 327 4.42e-68 217
MsG0280007676.01.T01 MTR_6g043460 40.836 311 171 6 25 333 36 335 4.42e-68 217
MsG0280007676.01.T01 MTR_6g027440 39.815 324 184 7 4 326 1 314 1.60e-66 213
MsG0280007676.01.T01 MTR_4g127670 39.934 303 172 5 24 322 23 319 2.95e-65 209
MsG0280007676.01.T01 MTR_5g074860 39.869 306 134 4 23 325 27 285 4.51e-65 207
MsG0280007676.01.T01 MTR_4g095450 39.024 328 186 6 1 322 1 320 1.55e-64 207
MsG0280007676.01.T01 MTR_1g009750 40.391 307 173 7 25 326 27 328 2.68e-64 207
MsG0280007676.01.T01 MTR_3g092990 38.050 318 183 3 10 326 11 315 5.95e-64 206
MsG0280007676.01.T01 MTR_2g008160 38.608 316 178 8 18 326 17 323 2.94e-63 204
MsG0280007676.01.T01 MTR_8g062780 35.423 319 202 3 10 326 8 324 2.03e-62 202
MsG0280007676.01.T01 MTR_2g008730 44.898 245 127 4 86 326 61 301 6.32e-62 200
MsG0280007676.01.T01 MTR_2g078610 35.758 330 179 6 25 323 76 403 1.12e-60 200
MsG0280007676.01.T01 MTR_2g067440 35.045 331 181 7 25 325 60 386 1.69e-60 199
MsG0280007676.01.T01 MTR_2g077990 36.556 331 175 7 25 323 76 403 2.88e-60 199
MsG0280007676.01.T01 MTR_2g099175 36.808 307 182 4 25 326 36 335 4.24e-60 196
MsG0280007676.01.T01 MTR_5g033470 36.774 310 187 6 23 326 71 377 3.95e-59 195
MsG0280007676.01.T01 MTR_7g086870 36.513 304 181 5 23 326 20 311 1.02e-58 192
MsG0280007676.01.T01 MTR_3g105790 38.689 305 177 4 25 326 25 322 3.94e-58 191
MsG0280007676.01.T01 MTR_0286s0010 37.459 307 181 7 25 326 34 334 2.24e-57 189
MsG0280007676.01.T01 MTR_6g008075 37.459 307 181 7 25 326 34 334 2.24e-57 189
MsG0280007676.01.T01 MTR_0147s0010 34.891 321 173 4 25 325 77 381 3.85e-57 190
MsG0280007676.01.T01 MTR_2g078280 36.562 320 168 7 25 312 76 392 8.37e-56 187
MsG0280007676.01.T01 MTR_1g009750 37.459 307 165 8 25 326 27 311 6.00e-55 182
MsG0280007676.01.T01 MTR_2g067450 36.393 305 184 6 25 325 11 309 1.33e-54 181
MsG0280007676.01.T01 MTR_1g066710 34.295 312 192 5 21 328 23 325 2.83e-54 181
MsG0280007676.01.T01 MTR_1g066380 33.441 311 196 4 21 328 23 325 2.24e-51 173
MsG0280007676.01.T01 MTR_1g066680 34.084 311 193 5 21 328 23 324 1.71e-49 168
MsG0280007676.01.T01 MTR_1g066640 33.441 311 196 4 21 328 23 325 6.98e-49 167
MsG0280007676.01.T01 MTR_4g132110 33.444 302 188 5 29 326 36 328 4.17e-48 165
MsG0280007676.01.T01 MTR_2g008160 33.861 316 158 8 18 326 17 288 9.59e-48 163
MsG0280007676.01.T01 MTR_5g074700 41.810 232 110 6 98 326 5 214 1.33e-46 157
MsG0280007676.01.T01 MTR_4g132110 32.899 307 188 6 29 326 36 333 4.06e-46 160
MsG0280007676.01.T01 MTR_2g008160 43.860 171 92 3 20 190 19 185 1.37e-43 149
MsG0280007676.01.T01 MTR_1g066380 34.470 264 160 5 69 328 3 257 1.26e-42 149
MsG0280007676.01.T01 MTR_7g072490 38.800 250 90 4 71 320 2 188 2.41e-42 146
MsG0280007676.01.T01 MTR_3g105790 39.496 238 138 3 92 326 12 246 8.35e-42 146
MsG0280007676.01.T01 MTR_3g072210 43.229 192 100 4 136 326 55 238 1.78e-40 142
MsG0280007676.01.T01 MTR_3g072260 47.934 121 63 0 21 141 22 142 5.19e-34 122
MsG0280007676.01.T01 MTR_2g078560 31.858 226 121 4 131 325 96 319 8.50e-30 116
MsG0280007676.01.T01 MTR_5g058120 38.037 163 88 3 160 322 6 155 7.74e-26 104
MsG0280007676.01.T01 MTR_2g077980 28.000 275 156 8 87 323 11 281 2.25e-24 101
MsG0280007676.01.T01 MTR_2g029930 55.000 100 17 3 23 108 17 102 2.64e-24 95.9
MsG0280007676.01.T01 MTR_1g089005 40.310 129 70 2 15 137 5 132 1.31e-22 92.8
MsG0280007676.01.T01 MTR_7g086790 30.851 188 108 4 72 259 17 182 3.39e-20 87.4
MsG0280007676.01.T01 MTR_1g098320 45.455 88 46 1 245 332 45 130 4.15e-18 80.1
MsG0280007676.01.T01 MTR_3g462850 36.552 145 81 6 189 326 9 149 5.57e-18 80.1
MsG0280007676.01.T01 MTR_6g048160 53.521 71 29 2 64 134 22 88 1.54e-17 77.0
MsG0280007676.01.T01 MTR_4g114220 48.101 79 31 2 51 129 29 97 1.97e-17 78.6
MsG0280007676.01.T01 MTR_3g088160 28.141 199 115 7 118 310 180 356 9.05e-15 75.1
MsG0280007676.01.T01 MTR_3g088160 28.141 199 115 7 118 310 180 356 1.33e-14 74.7
MsG0280007676.01.T01 MTR_4g031040 30.286 175 78 3 84 258 1 131 2.41e-14 69.7
MsG0280007676.01.T01 MTR_5g074770 39.785 93 55 1 233 325 17 108 7.44e-14 67.4
MsG0280007676.01.T01 MTR_4g012865 45.588 68 37 0 25 92 77 144 8.37e-13 65.9
MsG0280007676.01.T01 MTR_7g086810 30.081 123 60 1 21 143 2 98 2.15e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007676.01.T01 AT5G06720 57.632 321 136 0 7 327 14 334 2.57e-130 376
MsG0280007676.01.T01 AT5G06730 55.319 329 147 0 7 335 15 343 5.21e-128 371
MsG0280007676.01.T01 AT2G38390 57.426 303 128 1 25 326 31 333 8.87e-124 360
MsG0280007676.01.T01 AT2G38380 56.436 303 131 1 25 326 31 333 9.75e-122 354
MsG0280007676.01.T01 AT4G08770 54.662 311 139 2 22 330 21 331 7.64e-121 352
MsG0280007676.01.T01 AT4G08780 54.341 311 140 2 22 330 21 331 4.57e-120 350
MsG0280007676.01.T01 AT3G32980 57.655 307 128 2 25 329 31 337 8.26e-120 350
MsG0280007676.01.T01 AT3G49120 57.329 307 129 2 25 329 32 338 1.27e-119 349
MsG0280007676.01.T01 AT3G49110 54.294 326 144 3 6 329 17 339 7.60e-117 342
MsG0280007676.01.T01 AT5G66390 48.701 308 157 1 19 326 27 333 2.74e-107 317
MsG0280007676.01.T01 AT2G18150 50.163 307 152 1 20 326 31 336 6.62e-107 316
MsG0280007676.01.T01 AT2G18140 50.993 302 147 1 25 326 35 335 2.58e-106 315
MsG0280007676.01.T01 AT1G44970 51.475 305 148 0 22 326 42 346 3.02e-105 312
MsG0280007676.01.T01 AT4G36430 49.013 304 154 1 23 326 28 330 4.77e-105 311
MsG0280007676.01.T01 AT1G49570 50.485 309 148 3 19 324 42 348 5.57e-104 309
MsG0280007676.01.T01 AT5G19890 50.000 322 149 5 7 326 16 327 6.35e-104 308
MsG0280007676.01.T01 AT5G19880 52.117 307 144 2 23 326 23 329 1.33e-103 308
MsG0280007676.01.T01 AT3G50990 48.675 302 154 1 25 326 41 341 1.70e-101 303
MsG0280007676.01.T01 AT1G14550 48.185 303 149 3 25 326 26 321 1.26e-93 282
MsG0280007676.01.T01 AT5G05340 47.697 304 148 4 25 326 30 324 3.44e-93 281
MsG0280007676.01.T01 AT2G35380 50.000 306 149 3 25 326 30 335 7.85e-91 275
MsG0280007676.01.T01 AT1G14540 45.399 326 167 3 1 326 1 315 2.97e-90 273
MsG0280007676.01.T01 AT5G58400 44.615 325 168 4 5 326 10 325 3.09e-87 266
MsG0280007676.01.T01 AT5G58390 47.213 305 149 4 25 326 21 316 5.43e-87 265
MsG0280007676.01.T01 AT1G68850 45.277 307 162 5 25 326 30 335 2.03e-86 264
MsG0280007676.01.T01 AT4G16270 44.816 299 160 4 29 326 54 348 1.51e-85 262
MsG0280007676.01.T01 AT3G03670 41.195 318 178 4 12 326 10 321 2.86e-81 250
MsG0280007676.01.T01 AT2G22420 42.020 307 163 5 25 326 23 319 1.35e-79 246
MsG0280007676.01.T01 AT5G15180 41.639 305 168 5 25 326 32 329 2.26e-79 246
MsG0280007676.01.T01 AT2G41480 44.337 309 156 7 25 326 29 328 2.42e-79 246
MsG0280007676.01.T01 AT4G11290 41.538 325 182 4 8 326 4 326 1.68e-78 243
MsG0280007676.01.T01 AT5G64120 44.966 298 156 5 29 326 39 328 2.10e-78 243
MsG0280007676.01.T01 AT1G71695 43.269 312 162 7 21 329 43 342 1.16e-77 242
MsG0280007676.01.T01 AT3G01190 40.491 326 186 6 2 326 3 321 2.30e-77 240
MsG0280007676.01.T01 AT5G51890 40.000 305 172 6 25 326 26 322 3.78e-75 234
MsG0280007676.01.T01 AT1G05260 39.514 329 189 6 4 326 1 325 9.91e-75 234
MsG0280007676.01.T01 AT5G17820 39.550 311 176 5 16 326 15 313 1.57e-74 233
MsG0280007676.01.T01 AT2G18980 40.810 321 179 5 10 326 10 323 3.85e-74 232
MsG0280007676.01.T01 AT1G05240 40.461 304 167 5 29 326 30 325 1.01e-73 231
MsG0280007676.01.T01 AT1G05250 40.461 304 167 5 29 326 30 325 1.01e-73 231
MsG0280007676.01.T01 AT5G42180 40.000 320 183 6 7 325 5 316 2.22e-73 230
MsG0280007676.01.T01 AT4G25980 40.391 307 172 5 25 326 26 326 4.53e-73 229
MsG0280007676.01.T01 AT5G17820 39.550 311 176 5 16 326 68 366 6.63e-73 230
MsG0280007676.01.T01 AT4G37530 42.020 307 173 3 23 326 25 329 2.32e-72 228
MsG0280007676.01.T01 AT5G39580 44.040 302 154 7 29 326 29 319 6.22e-72 226
MsG0280007676.01.T01 AT3G21770 40.453 309 178 5 17 323 21 325 1.22e-71 226
MsG0280007676.01.T01 AT4G33420 40.063 317 171 6 16 326 22 325 4.73e-70 222
MsG0280007676.01.T01 AT1G30870 39.935 308 172 6 25 329 51 348 4.97e-70 223
MsG0280007676.01.T01 AT4G33420 40.063 317 171 6 16 326 69 372 3.65e-69 221
MsG0280007676.01.T01 AT5G64100 40.532 301 166 6 29 326 41 331 6.79e-69 219
MsG0280007676.01.T01 AT5G67400 39.514 329 190 6 3 326 5 329 9.86e-69 218
MsG0280007676.01.T01 AT5G64110 43.046 302 159 7 29 326 38 330 1.26e-68 218
MsG0280007676.01.T01 AT4G30170 39.610 308 175 5 23 326 25 325 1.29e-68 218
MsG0280007676.01.T01 AT4G33870 36.119 335 176 5 24 323 67 398 2.02e-68 220
MsG0280007676.01.T01 AT3G49960 38.154 325 194 4 6 326 8 329 3.26e-68 217
MsG0280007676.01.T01 AT2G35380 48.988 247 122 3 84 326 1 247 5.20e-68 214
MsG0280007676.01.T01 AT2G34060 40.328 305 173 6 25 323 42 343 1.14e-66 214
MsG0280007676.01.T01 AT5G14130 39.355 310 173 7 23 326 30 330 3.02e-66 212
MsG0280007676.01.T01 AT5G14130 39.610 308 171 7 25 326 73 371 6.88e-66 213
MsG0280007676.01.T01 AT2G39040 40.514 311 174 7 23 326 44 350 1.17e-65 211
MsG0280007676.01.T01 AT4G37520 38.762 307 183 3 23 326 25 329 2.08e-65 210
MsG0280007676.01.T01 AT3G28200 37.829 304 179 4 25 326 21 316 1.85e-64 207
MsG0280007676.01.T01 AT4G37520 38.436 307 181 4 23 326 25 326 4.55e-64 206
MsG0280007676.01.T01 AT1G77100 40.256 313 169 8 21 326 18 319 1.20e-63 205
MsG0280007676.01.T01 AT5G24070 39.274 303 171 6 31 328 43 337 1.27e-63 206
MsG0280007676.01.T01 AT4G37530 43.529 255 141 2 23 274 25 279 3.33e-63 202
MsG0280007676.01.T01 AT5G40150 37.864 309 183 4 20 326 27 328 6.34e-63 203
MsG0280007676.01.T01 AT1G24110 36.066 305 188 5 25 326 22 322 4.71e-62 201
MsG0280007676.01.T01 AT4G26010 36.728 324 189 6 4 326 1 309 2.73e-61 199
MsG0280007676.01.T01 AT4G26010 36.728 324 189 6 4 326 29 337 6.12e-61 199
MsG0280007676.01.T01 AT4G17690 36.721 305 182 5 25 326 26 322 1.46e-60 197
MsG0280007676.01.T01 AT5G22410 36.760 321 189 8 7 322 10 321 4.04e-60 196
MsG0280007676.01.T01 AT5G47000 33.642 324 205 5 6 326 14 330 6.18e-60 196
MsG0280007676.01.T01 AT2G24800 39.869 306 173 5 25 326 31 329 1.31e-59 195
MsG0280007676.01.T01 AT4G31760 38.312 308 174 6 25 326 29 326 5.18e-59 193
MsG0280007676.01.T01 AT2G43480 39.286 280 157 6 52 326 64 335 3.96e-58 191
MsG0280007676.01.T01 AT1G34510 34.462 325 195 7 4 326 1 309 6.59e-55 182
MsG0280007676.01.T01 AT3G17070 35.650 331 193 9 8 326 17 339 3.81e-53 178
MsG0280007676.01.T01 AT4G21960 32.239 335 209 7 2 328 5 329 1.47e-48 166
MsG0280007676.01.T01 AT2G37130 32.803 314 199 5 17 326 22 327 4.61e-47 162
MsG0280007676.01.T01 AT4G25980 45.882 170 88 3 25 194 71 236 2.89e-46 159
MsG0280007676.01.T01 AT2G37130 32.781 302 191 5 29 326 3 296 7.17e-45 155
MsG0280007676.01.T01 AT3G17070 34.397 282 168 9 53 326 4 276 1.05e-38 139
MsG0280007676.01.T01 AT5G39580 41.748 206 105 5 29 227 29 226 6.54e-38 135
MsG0280007676.01.T01 AT2G24800 43.931 173 87 3 25 194 31 196 1.98e-33 124
MsG0280007676.01.T01 AT1G77490 26.394 269 148 11 59 310 106 341 1.69e-16 80.5
MsG0280007676.01.T01 AT1G77490 26.394 269 148 11 59 310 106 341 2.96e-16 79.7
MsG0280007676.01.T01 AT4G08390 25.461 271 148 11 59 310 126 361 6.42e-14 72.4
MsG0280007676.01.T01 AT4G08390 25.461 271 148 11 59 310 127 362 6.46e-14 72.4
MsG0280007676.01.T01 AT4G08390 25.461 271 148 11 59 310 127 362 6.46e-14 72.4
MsG0280007676.01.T01 AT4G08390 25.461 271 148 11 59 310 127 362 6.46e-14 72.4
MsG0280007676.01.T01 AT4G32320 26.165 279 150 10 36 309 96 323 9.87e-13 68.6

Find 88 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGAAGTATCTTCTATTT+TGG 0.206832 2:+18993201 MsG0280007676.01.T01:CDS
GGTTGTTTCCTGTTGAGTTT+TGG 0.220863 2:-18994608 None:intergenic
TTCCAAACAGAAACTCATTA+AGG 0.226113 2:+18993092 MsG0280007676.01.T01:CDS
AGGAAACAACCTAGCCAATT+TGG 0.278951 2:+18994620 MsG0280007676.01.T01:CDS
GATGAGACTGGCACCGATTC+GGG 0.301159 2:-18992373 None:intergenic
CCCCTTAATGAGTTTCTGTT+TGG 0.309457 2:-18993094 None:intergenic
CTGGTGATGAAGGGGAAATT+AGG 0.315180 2:+18994847 MsG0280007676.01.T01:CDS
AATATGACTCTAAACACAAT+AGG 0.329328 2:-18992330 None:intergenic
AATTCTGAAAGAAGAGAGTT+TGG 0.333317 2:-18994782 None:intergenic
CAGAAACTCATTAAGGGGTT+TGG 0.333622 2:+18993099 MsG0280007676.01.T01:CDS
TACTTAGGTGCTCATACATT+TGG 0.341082 2:+18994474 MsG0280007676.01.T01:intron
AAAGCTTCATTTCTTGTTCA+AGG 0.342588 2:+18994174 MsG0280007676.01.T01:CDS
TCCCTTCTTCCCAATGGAAT+TGG 0.355749 2:-18994081 None:intergenic
GGTTCCATGCGTGTTGTACT+AGG 0.361248 2:+18992219 MsG0280007676.01.T01:CDS
TTTGTAAATGGTAACTCCTC+TGG 0.366528 2:+18994882 MsG0280007676.01.T01:CDS
ATGATTAGAATGGCGAATAT+TGG 0.398231 2:+18994816 MsG0280007676.01.T01:CDS
TATTTGTTATCAAAGTGATT+AGG 0.408604 2:-18994654 None:intergenic
TCCAAACAGAAACTCATTAA+GGG 0.412491 2:+18993093 MsG0280007676.01.T01:CDS
GCGAATATTGGAGTGTTAAC+TGG 0.413231 2:+18994828 MsG0280007676.01.T01:CDS
TGATGAGACTGGCACCGATT+CGG 0.427794 2:-18992374 None:intergenic
AGGTGTGGTAAGGTCCAAAT+TGG 0.430992 2:-18994634 None:intergenic
CTTGCAAATCAAAACCTTCC+CGG 0.432751 2:+18994126 MsG0280007676.01.T01:CDS
ATGGCAATGGTATCTGCATT+AGG 0.433475 2:-18994738 None:intergenic
TCCCTCATGGCCAATTCCAT+TGG 0.444960 2:+18994071 MsG0280007676.01.T01:CDS
GTTGTGTTTAGTGTTGGATC+AGG 0.445757 2:-18994555 None:intergenic
ATATGTCCCCAAAACTCAAC+AGG 0.446009 2:+18994600 MsG0280007676.01.T01:CDS
CCCTCATGGCCAATTCCATT+GGG 0.446682 2:+18994072 MsG0280007676.01.T01:CDS
ATATGACTCTAAACACAATA+GGG 0.454551 2:-18992329 None:intergenic
TCCCTCACTGATCCCCGAAT+CGG 0.454674 2:+18992360 MsG0280007676.01.T01:CDS
GAATCGGTGCCAGTCTCATC+AGG 0.463560 2:+18992376 MsG0280007676.01.T01:CDS
TCCAATCTTCAAAACCTCAA+TGG 0.466595 2:+18994681 MsG0280007676.01.T01:CDS
GGCCAATTCCATTGGGAAGA+AGG 0.467383 2:+18994079 MsG0280007676.01.T01:CDS
TTAATTGATATGTGATTGAA+AGG 0.473271 2:+18994956 MsG0280007676.01.T01:three_prime_UTR
TCAGCACAAGAAACAGTGTT+AGG 0.474603 2:-18993163 None:intergenic
TTTGTGATGCATGGAGGGTA+TGG 0.479593 2:+18992261 MsG0280007676.01.T01:CDS
CACTTCGAAGTAAGCCATTG+AGG 0.486340 2:-18994695 None:intergenic
CTATACAATTTCAGTGGCAC+TGG 0.489654 2:+18994528 MsG0280007676.01.T01:CDS
TAGTGTGTCGATGATTAGAA+TGG 0.493145 2:+18994806 MsG0280007676.01.T01:CDS
TCCCGGACCCTTCTCTACAT+TGG 0.499367 2:+18994143 MsG0280007676.01.T01:CDS
TGGTGTGCATTTGTGATGCA+TGG 0.501927 2:+18992252 MsG0280007676.01.T01:CDS
ATCCAATGTAGAGAAGGGTC+CGG 0.504853 2:-18994145 None:intergenic
ACAGATTTAGTTACACTCTC+AGG 0.505239 2:+18994207 MsG0280007676.01.T01:CDS
GGAGTGTTAACTGGTGATGA+AGG 0.514476 2:+18994837 MsG0280007676.01.T01:CDS
AACACAATAGGGTATAGATC+TGG 0.518782 2:-18992318 None:intergenic
TGTGTTTAGAGTCATATTTG+AGG 0.521122 2:+18992335 MsG0280007676.01.T01:CDS
ATTTGCAAGAGTTATGTTTG+CGG 0.522007 2:-18994112 None:intergenic
TCCAATGTAGAGAAGGGTCC+GGG 0.526068 2:-18994144 None:intergenic
GCCAATTCCATTGGGAAGAA+GGG 0.526946 2:+18994080 MsG0280007676.01.T01:CDS
CCCAATGGAATTGGCCATGA+GGG 0.531181 2:-18994072 None:intergenic
AGAAGATACTTCAGCAGCAA+TGG 0.536212 2:-18993194 None:intergenic
AAGTAAGTTGTGTTTAGTGT+TGG 0.540670 2:-18994561 None:intergenic
CAAAGTGATTAGGTGTGGTA+AGG 0.543295 2:-18994644 None:intergenic
TGATGCATGGAGGGTATGGT+TGG 0.543555 2:+18992265 MsG0280007676.01.T01:CDS
CATGCGTGTTGTACTAGGGT+TGG 0.550754 2:+18992224 MsG0280007676.01.T01:CDS
AAGCTATCCCTTCTTCCCAA+TGG 0.554508 2:-18994087 None:intergenic
TTGTACTAGGGTTGGCACTT+TGG 0.555400 2:+18992232 MsG0280007676.01.T01:CDS
AAGTTGATCCAATGTAGAGA+AGG 0.557740 2:-18994151 None:intergenic
CATGTTTCACTGTAGAATGA+TGG 0.560211 2:-18992294 None:intergenic
CCAAACAGAAACTCATTAAG+GGG 0.561754 2:+18993094 MsG0280007676.01.T01:CDS
TTGATCTATGAACAGGGAGG+AGG 0.566092 2:+18994048 MsG0280007676.01.T01:intron
AAAGCTATTAACAATGGCAA+TGG 0.569604 2:-18994751 None:intergenic
GCTCGTGGTGGATCAAAAGA+TGG 0.571292 2:+18994909 MsG0280007676.01.T01:CDS
GTTATCAAAGTGATTAGGTG+TGG 0.571420 2:-18994649 None:intergenic
ACCGATTCGGGGATCAGTGA+GGG 0.574096 2:-18992361 None:intergenic
AGTTGATCCAATGTAGAGAA+GGG 0.578999 2:-18994150 None:intergenic
TCTGCTAAAGCTATTAACAA+TGG 0.580549 2:-18994757 None:intergenic
GTGCATTTGTGATGCATGGA+GGG 0.581824 2:+18992256 MsG0280007676.01.T01:CDS
TGCCACTGAAATTGTATAGA+CGG 0.584385 2:-18994524 None:intergenic
TCCTCTGGATTAGCTCGTGG+TGG 0.586455 2:+18994897 MsG0280007676.01.T01:CDS
GTTCCATGCGTGTTGTACTA+GGG 0.589091 2:+18992220 MsG0280007676.01.T01:CDS
TGGTAAGGTCCAAATTGGCT+AGG 0.596004 2:-18994629 None:intergenic
AACAGGGAGGAGGTCCCTCA+TGG 0.596475 2:+18994058 MsG0280007676.01.T01:intron
AAAATGAAGCCTGATGAGAC+TGG 0.599915 2:-18992385 None:intergenic
AACTCCTCTGGATTAGCTCG+TGG 0.601383 2:+18994894 MsG0280007676.01.T01:CDS
TAATTGATATGTGATTGAAA+GGG 0.607151 2:+18994957 MsG0280007676.01.T01:three_prime_UTR
GAGTGTTAACTGGTGATGAA+GGG 0.609584 2:+18994838 MsG0280007676.01.T01:CDS
TGTTTGTGATAGGGCTGCGA+TGG 0.615720 2:+18993019 MsG0280007676.01.T01:intron
ATGAGACTGGCACCGATTCG+GGG 0.630611 2:-18992372 None:intergenic
AACCGTCTATACAATTTCAG+TGG 0.634780 2:+18994522 MsG0280007676.01.T01:CDS
TAAGTATGACAAGAGATACA+TGG 0.638838 2:-18995044 None:intergenic
CAACCCTAGTACAACACGCA+TGG 0.644628 2:-18992223 None:intergenic
TGTGCATTTGTGATGCATGG+AGG 0.652684 2:+18992255 MsG0280007676.01.T01:CDS
ATGTAGAGAAGGGTCCGGGA+AGG 0.656157 2:-18994140 None:intergenic
AGTGTTAACTGGTGATGAAG+GGG 0.656296 2:+18994839 MsG0280007676.01.T01:CDS
CACCGATTCGGGGATCAGTG+AGG 0.657501 2:-18992362 None:intergenic
TCCCAATGGAATTGGCCATG+AGG 0.657766 2:-18994073 None:intergenic
AATGGTATCTGCATTAGGAG+TGG 0.670287 2:-18994733 None:intergenic
TCCACCACGAGCTAATCCAG+AGG 0.739992 2:-18994898 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTTAGAAATTATTTATA+TGG - Chr2:18992461-18992480 None:intergenic 10.0%
!! ATTTAAATAAAAAACTAACA+TGG + Chr2:18992936-18992955 MsG0280007676.01.T01:intron 10.0%
!!! CATAGAAAATAAATTATTTT+AGG - Chr2:18993929-18993948 None:intergenic 10.0%
!!! TAAATAATAGTTTTTTCTAA+TGG - Chr2:18993710-18993729 None:intergenic 10.0%
!!! TAAATTTTTATTTTGTTTGT+AGG - Chr2:18992790-18992809 None:intergenic 10.0%
!!! TAATGTTTTGTTTTTATATT+AGG + Chr2:18993287-18993306 MsG0280007676.01.T01:intron 10.0%
!! AAAATATACTATAAGTACAA+GGG + Chr2:18992975-18992994 MsG0280007676.01.T01:intron 15.0%
!! AAAATGAATGTTCTTATATT+AGG + Chr2:18992718-18992737 MsG0280007676.01.T01:intron 15.0%
!!! AAATTATTTTAGGTATTGAT+AGG - Chr2:18993919-18993938 None:intergenic 15.0%
!!! ATAATTTTATCCATATAACT+AGG - Chr2:18993257-18993276 None:intergenic 15.0%
!!! ATGACAAGATTTTAATTATT+GGG + Chr2:18992874-18992893 MsG0280007676.01.T01:intron 15.0%
!! AATTTAAGAGAACACAAAAA+TGG + Chr2:18992197-18992216 MsG0280007676.01.T01:exon 20.0%
!! ATTTAAGAGAACACAAAAAT+GGG + Chr2:18992198-18992217 MsG0280007676.01.T01:exon 20.0%
!! CAAAATATACTATAAGTACA+AGG + Chr2:18992974-18992993 MsG0280007676.01.T01:intron 20.0%
!! TAATTGATATGTGATTGAAA+GGG + Chr2:18994957-18994976 MsG0280007676.01.T01:three_prime_UTR 20.0%
!! TTAAAAAAGTAAGTTTGCAT+TGG - Chr2:18993443-18993462 None:intergenic 20.0%
!! TTAATTGATATGTGATTGAA+AGG + Chr2:18994956-18994975 MsG0280007676.01.T01:three_prime_UTR 20.0%
!!! GATGACAAGATTTTAATTAT+TGG + Chr2:18992873-18992892 MsG0280007676.01.T01:intron 20.0%
!!! TATTCCTTTTCTTTTTCTTT+TGG - Chr2:18993865-18993884 None:intergenic 20.0%
!!! TATTTGTTATCAAAGTGATT+AGG - Chr2:18994657-18994676 None:intergenic 20.0%
!!! TTGCAATGTAATTTTGTAAA+TGG + Chr2:18994870-18994889 MsG0280007676.01.T01:CDS 20.0%
!!! TTGGAACTTTATTTTATGAA+TGG - Chr2:18993424-18993443 None:intergenic 20.0%
!!! TTTTCTTCTTCTTTTTTTAG+AGG + Chr2:18992693-18992712 MsG0280007676.01.T01:intron 20.0%
!!! TTTTTAGTGGTATTCAATAA+CGG + Chr2:18992751-18992770 MsG0280007676.01.T01:intron 20.0%
!!! TTTTTCATTACCTAGTTATA+TGG + Chr2:18993244-18993263 MsG0280007676.01.T01:intron 20.0%
! AAGTGAAAGAGATAAAAGAA+GGG - Chr2:18993570-18993589 None:intergenic 25.0%
! AATATGACTCTAAACACAAT+AGG - Chr2:18992333-18992352 None:intergenic 25.0%
! ACTTACCAATACATTCTAAA+AGG + Chr2:18993390-18993409 MsG0280007676.01.T01:intron 25.0%
! ATATGACTCTAAACACAATA+GGG - Chr2:18992332-18992351 None:intergenic 25.0%
! ATCATAGCTCAAACTTTATA+TGG + Chr2:18993972-18993991 MsG0280007676.01.T01:intron 25.0%
! ATGTATATTGATCTATGAAC+AGG + Chr2:18994041-18994060 MsG0280007676.01.T01:intron 25.0%
! ATTTCTAACTTTCTTACACT+AGG + Chr2:18992469-18992488 MsG0280007676.01.T01:intron 25.0%
! CATAGATCAATATACATTAG+AGG - Chr2:18994038-18994057 None:intergenic 25.0%
! GTAACCAAAAGAAAAAGAAA+AGG + Chr2:18993858-18993877 MsG0280007676.01.T01:intron 25.0%
! TCAATTTCAAAGAAAGAAGT+AGG - Chr2:18992510-18992529 None:intergenic 25.0%
! TCTCATGATTTCTTTCTATT+TGG + Chr2:18993655-18993674 MsG0280007676.01.T01:intron 25.0%
! TCTTTGCCTAAAATGATTAT+AGG + Chr2:18992599-18992618 MsG0280007676.01.T01:intron 25.0%
! TGTATATTGATCTATGAACA+GGG + Chr2:18994042-18994061 MsG0280007676.01.T01:intron 25.0%
!! ATCGAACCTATAATCATTTT+AGG - Chr2:18992608-18992627 None:intergenic 25.0%
!! ATGGTGTATTGAGATTATTT+TGG - Chr2:18993369-18993388 None:intergenic 25.0%
!! CTTCTTTTACTATACTGATA+TGG + Chr2:18992552-18992571 MsG0280007676.01.T01:intron 25.0%
!! GAACGGTATAATGTTAATTT+TGG + Chr2:18992528-18992547 MsG0280007676.01.T01:intron 25.0%
!! TAATTCAATAAGTTGACGTT+GGG - Chr2:18992853-18992872 None:intergenic 25.0%
!!! ATAGAATGACTATTTTTGTG+AGG - Chr2:18994328-18994347 None:intergenic 25.0%
!!! CTTCTTTCTTTGAAATTGAA+CGG + Chr2:18992511-18992530 MsG0280007676.01.T01:intron 25.0%
!!! GTGATTTTTGACTTGAAAAA+TGG + Chr2:18994431-18994450 MsG0280007676.01.T01:intron 25.0%
!!! TAGAATGACTATTTTTGTGA+GGG - Chr2:18994327-18994346 None:intergenic 25.0%
!!! TTATTTTGTTTGTAGGTCAT+TGG - Chr2:18992783-18992802 None:intergenic 25.0%
!!! TTTTAATGAAGCTTTGTTGT+TGG - Chr2:18994268-18994287 None:intergenic 25.0%
AAAGCTATTAACAATGGCAA+TGG - Chr2:18994754-18994773 None:intergenic 30.0%
AAAGCTTCATTTCTTGTTCA+AGG + Chr2:18994174-18994193 MsG0280007676.01.T01:CDS 30.0%
AAGGGATAAAACATTTGTCT+TGG - Chr2:18993552-18993571 None:intergenic 30.0%
AAGTAAGTTGTGTTTAGTGT+TGG - Chr2:18994564-18994583 None:intergenic 30.0%
ATGATTAGAATGGCGAATAT+TGG + Chr2:18994816-18994835 MsG0280007676.01.T01:CDS 30.0%
ATTTGCAAGAGTTATGTTTG+CGG - Chr2:18994115-18994134 None:intergenic 30.0%
GAAGTGAAAGAGATAAAAGA+AGG - Chr2:18993571-18993590 None:intergenic 30.0%
GAATGTTAGCGTAAAAAACA+TGG - Chr2:18994410-18994429 None:intergenic 30.0%
GTTTATGCATGTTTGTGATA+GGG + Chr2:18993010-18993029 MsG0280007676.01.T01:intron 30.0%
TCCAAACAGAAACTCATTAA+GGG + Chr2:18993093-18993112 MsG0280007676.01.T01:CDS 30.0%
TCTGCTAAAGCTATTAACAA+TGG - Chr2:18994760-18994779 None:intergenic 30.0%
TGTTTATGCATGTTTGTGAT+AGG + Chr2:18993009-18993028 MsG0280007676.01.T01:intron 30.0%
TTCCAAACAGAAACTCATTA+AGG + Chr2:18993092-18993111 MsG0280007676.01.T01:CDS 30.0%
! AATTCTGAAAGAAGAGAGTT+TGG - Chr2:18994785-18994804 None:intergenic 30.0%
! ACCAATACATTCTAAAAGGT+TGG + Chr2:18993394-18993413 MsG0280007676.01.T01:intron 30.0%
! CTAATTCAATAAGTTGACGT+TGG - Chr2:18992854-18992873 None:intergenic 30.0%
! TACATTAGAGGACTTTAAGA+TGG - Chr2:18994026-18994045 None:intergenic 30.0%
! TAGAATGTATTGGTAAGTGA+TGG - Chr2:18993388-18993407 None:intergenic 30.0%
! TATCACGGTTGTTGTAATTT+TGG + Chr2:18994377-18994396 MsG0280007676.01.T01:intron 30.0%
! TGTGTTTAGAGTCATATTTG+AGG + Chr2:18992335-18992354 MsG0280007676.01.T01:CDS 30.0%
! TTTAAGATGGACATTTGAGA+AGG - Chr2:18994013-18994032 None:intergenic 30.0%
! TTTTGATCCCTCAATTATCA+CGG + Chr2:18994362-18994381 MsG0280007676.01.T01:intron 30.0%
!! AGGCTCATAAAGATTTTTAG+TGG + Chr2:18992738-18992757 MsG0280007676.01.T01:intron 30.0%
!! TGCTGAAGTATCTTCTATTT+TGG + Chr2:18993201-18993220 MsG0280007676.01.T01:CDS 30.0%
!! TTTTGGTGGATAGAGTATTT+TGG - Chr2:18993352-18993371 None:intergenic 30.0%
!!! GTGTATTGAGATTATTTTGG+TGG - Chr2:18993366-18993385 None:intergenic 30.0%
AAATCATGAGACCACAAAAC+CGG - Chr2:18993646-18993665 None:intergenic 35.0%
AACACAATAGGGTATAGATC+TGG - Chr2:18992321-18992340 None:intergenic 35.0%
AACCGTCTATACAATTTCAG+TGG + Chr2:18994522-18994541 MsG0280007676.01.T01:CDS 35.0%
ACAACAACCGTGATAATTGA+GGG - Chr2:18994372-18994391 None:intergenic 35.0%
ACAGATTTAGTTACACTCTC+AGG + Chr2:18994207-18994226 MsG0280007676.01.T01:CDS 35.0%
AGTTGATCCAATGTAGAGAA+GGG - Chr2:18994153-18994172 None:intergenic 35.0%
ATATTGATCTATGAACAGGG+AGG + Chr2:18994045-18994064 MsG0280007676.01.T01:intron 35.0%
CATGTTTCACTGTAGAATGA+TGG - Chr2:18992297-18992316 None:intergenic 35.0%
CCAAACAGAAACTCATTAAG+GGG + Chr2:18993094-18993113 MsG0280007676.01.T01:CDS 35.0%
CTTCTCAAATAGACGAATTG+AGG - Chr2:18992636-18992655 None:intergenic 35.0%
GAAGTAGGTTGTAATTGCAA+AGG - Chr2:18992495-18992514 None:intergenic 35.0%
GTTATCAAAGTGATTAGGTG+TGG - Chr2:18994652-18994671 None:intergenic 35.0%
TACAACAACCGTGATAATTG+AGG - Chr2:18994373-18994392 None:intergenic 35.0%
TACTTAGGTGCTCATACATT+TGG + Chr2:18994474-18994493 MsG0280007676.01.T01:intron 35.0%
TCCAATCTTCAAAACCTCAA+TGG + Chr2:18994681-18994700 MsG0280007676.01.T01:CDS 35.0%
TGCCACTGAAATTGTATAGA+CGG - Chr2:18994527-18994546 None:intergenic 35.0%
TTTGTAAATGGTAACTCCTC+TGG + Chr2:18994882-18994901 MsG0280007676.01.T01:CDS 35.0%
! AAGTTGATCCAATGTAGAGA+AGG - Chr2:18994154-18994173 None:intergenic 35.0%
! TAGTGTGTCGATGATTAGAA+TGG + Chr2:18994806-18994825 MsG0280007676.01.T01:CDS 35.0%
! TTGTTTCCTGTTGAGTTTTG+GGG - Chr2:18994609-18994628 None:intergenic 35.0%
!! GGTTGTTGTAATTTTGGTCT+CGG + Chr2:18994383-18994402 MsG0280007676.01.T01:intron 35.0%
!! GTTGTTTCCTGTTGAGTTTT+GGG - Chr2:18994610-18994629 None:intergenic 35.0%
!!! GCCAACCTTTTAGAATGTAT+TGG - Chr2:18993398-18993417 None:intergenic 35.0%
AAAATGAAGCCTGATGAGAC+TGG - Chr2:18992388-18992407 None:intergenic 40.0%
AATGGTATCTGCATTAGGAG+TGG - Chr2:18994736-18994755 None:intergenic 40.0%
AGAAGATACTTCAGCAGCAA+TGG - Chr2:18993197-18993216 None:intergenic 40.0%
AGGAAACAACCTAGCCAATT+TGG + Chr2:18994620-18994639 MsG0280007676.01.T01:CDS 40.0%
ATATGTCCCCAAAACTCAAC+AGG + Chr2:18994600-18994619 MsG0280007676.01.T01:CDS 40.0%
ATGGCAATGGTATCTGCATT+AGG - Chr2:18994741-18994760 None:intergenic 40.0%
CAAAGTGATTAGGTGTGGTA+AGG - Chr2:18994647-18994666 None:intergenic 40.0%
CAGAAACTCATTAAGGGGTT+TGG + Chr2:18993099-18993118 MsG0280007676.01.T01:CDS 40.0%
CCCCTTAATGAGTTTCTGTT+TGG - Chr2:18993097-18993116 None:intergenic 40.0%
CTATACAATTTCAGTGGCAC+TGG + Chr2:18994528-18994547 MsG0280007676.01.T01:CDS 40.0%
CTTGCAAATCAAAACCTTCC+CGG + Chr2:18994126-18994145 MsG0280007676.01.T01:CDS 40.0%
TCAGCACAAGAAACAGTGTT+AGG - Chr2:18993166-18993185 None:intergenic 40.0%
! AGTGTTAACTGGTGATGAAG+GGG + Chr2:18994839-18994858 MsG0280007676.01.T01:CDS 40.0%
! GAGTGTTAACTGGTGATGAA+GGG + Chr2:18994838-18994857 MsG0280007676.01.T01:CDS 40.0%
! GCGAATATTGGAGTGTTAAC+TGG + Chr2:18994828-18994847 MsG0280007676.01.T01:CDS 40.0%
! GTTGTGTTTAGTGTTGGATC+AGG - Chr2:18994558-18994577 None:intergenic 40.0%
!! CTTGTTGTTGAGTTGACAGA+AGG - Chr2:18993623-18993642 None:intergenic 40.0%
!! GGTTGTTTCCTGTTGAGTTT+TGG - Chr2:18994611-18994630 None:intergenic 40.0%
!!! GCCATTGAGGTTTTGAAGAT+TGG - Chr2:18994685-18994704 None:intergenic 40.0%
AAGCTATCCCTTCTTCCCAA+TGG - Chr2:18994090-18994109 None:intergenic 45.0%
AGGTGTGGTAAGGTCCAAAT+TGG - Chr2:18994637-18994656 None:intergenic 45.0%
ATCCAATGTAGAGAAGGGTC+CGG - Chr2:18994148-18994167 None:intergenic 45.0%
CACTTCGAAGTAAGCCATTG+AGG - Chr2:18994698-18994717 None:intergenic 45.0%
CTGTCAACTCAACAACAAGC+CGG + Chr2:18993624-18993643 MsG0280007676.01.T01:intron 45.0%
GCCAATTCCATTGGGAAGAA+GGG + Chr2:18994080-18994099 MsG0280007676.01.T01:CDS 45.0%
GTGCATTTGTGATGCATGGA+GGG + Chr2:18992256-18992275 MsG0280007676.01.T01:CDS 45.0%
GTTCCATGCGTGTTGTACTA+GGG + Chr2:18992220-18992239 MsG0280007676.01.T01:CDS 45.0%
TCCCTTCTTCCCAATGGAAT+TGG - Chr2:18994084-18994103 None:intergenic 45.0%
TGCATCTTGCGGAGGAAATT+GGG - Chr2:18993526-18993545 None:intergenic 45.0%
TGGTAAGGTCCAAATTGGCT+AGG - Chr2:18994632-18994651 None:intergenic 45.0%
TGGTGTGCATTTGTGATGCA+TGG + Chr2:18992252-18992271 MsG0280007676.01.T01:CDS 45.0%
TGTGCATTTGTGATGCATGG+AGG + Chr2:18992255-18992274 MsG0280007676.01.T01:CDS 45.0%
TTGATCTATGAACAGGGAGG+AGG + Chr2:18994048-18994067 MsG0280007676.01.T01:intron 45.0%
TTTGTGATGCATGGAGGGTA+TGG + Chr2:18992261-18992280 MsG0280007676.01.T01:CDS 45.0%
! CTGGTGATGAAGGGGAAATT+AGG + Chr2:18994847-18994866 MsG0280007676.01.T01:CDS 45.0%
! GGAGTGTTAACTGGTGATGA+AGG + Chr2:18994837-18994856 MsG0280007676.01.T01:CDS 45.0%
! TGTCTTGGAAGTGCATCTTG+CGG - Chr2:18993537-18993556 None:intergenic 45.0%
! TTGTACTAGGGTTGGCACTT+TGG + Chr2:18992232-18992251 MsG0280007676.01.T01:CDS 45.0%
!! GAGTTGACAGAAGGTGTTGT+GGG - Chr2:18993614-18993633 None:intergenic 45.0%
!! TCAACAACAAGCCGGTTTTG+TGG + Chr2:18993632-18993651 MsG0280007676.01.T01:intron 45.0%
!! TGAGTTGACAGAAGGTGTTG+TGG - Chr2:18993615-18993634 None:intergenic 45.0%
!! AAAAACTTATAAAATAAATA+AGG + Chr2:18993496-18993515 MsG0280007676.01.T01:intron 5.0%
!! TAAGTATAAAAAAAAAAATT+AGG - Chr2:18994460-18994479 None:intergenic 5.0%
!!! TAATTTTTTTTTTTATACTT+AGG + Chr2:18994459-18994478 MsG0280007676.01.T01:intron 5.0%
CAACCCTAGTACAACACGCA+TGG - Chr2:18992226-18992245 None:intergenic 50.0%
CATGCGTGTTGTACTAGGGT+TGG + Chr2:18992224-18992243 MsG0280007676.01.T01:CDS 50.0%
CCCAATGGAATTGGCCATGA+GGG - Chr2:18994075-18994094 None:intergenic 50.0%
CCCTCATGGCCAATTCCATT+GGG + Chr2:18994072-18994091 MsG0280007676.01.T01:CDS 50.0%
GGCCAATTCCATTGGGAAGA+AGG + Chr2:18994079-18994098 MsG0280007676.01.T01:CDS 50.0%
GGTTCCATGCGTGTTGTACT+AGG + Chr2:18992219-18992238 MsG0280007676.01.T01:CDS 50.0%
GTGCATCTTGCGGAGGAAAT+TGG - Chr2:18993527-18993546 None:intergenic 50.0%
TCCAATGTAGAGAAGGGTCC+GGG - Chr2:18994147-18994166 None:intergenic 50.0%
TCCCAATGGAATTGGCCATG+AGG - Chr2:18994076-18994095 None:intergenic 50.0%
TCCCTCATGGCCAATTCCAT+TGG + Chr2:18994071-18994090 MsG0280007676.01.T01:CDS 50.0%
TGTTTGTGATAGGGCTGCGA+TGG + Chr2:18993019-18993038 MsG0280007676.01.T01:intron 50.0%
! TGATGCATGGAGGGTATGGT+TGG + Chr2:18992265-18992284 MsG0280007676.01.T01:CDS 50.0%
!! AACTCCTCTGGATTAGCTCG+TGG + Chr2:18994894-18994913 MsG0280007676.01.T01:CDS 50.0%
!! GCTCGTGGTGGATCAAAAGA+TGG + Chr2:18994909-18994928 MsG0280007676.01.T01:CDS 50.0%
!! TGATGAGACTGGCACCGATT+CGG - Chr2:18992377-18992396 None:intergenic 50.0%
ATGTAGAGAAGGGTCCGGGA+AGG - Chr2:18994143-18994162 None:intergenic 55.0%
TCCACCACGAGCTAATCCAG+AGG - Chr2:18994901-18994920 None:intergenic 55.0%
TCCCGGACCCTTCTCTACAT+TGG + Chr2:18994143-18994162 MsG0280007676.01.T01:CDS 55.0%
TCCCTCACTGATCCCCGAAT+CGG + Chr2:18992360-18992379 MsG0280007676.01.T01:CDS 55.0%
! CTTGGAAGTGCATCTTGCGG+AGG - Chr2:18993534-18993553 None:intergenic 55.0%
!! ACCGATTCGGGGATCAGTGA+GGG - Chr2:18992364-18992383 None:intergenic 55.0%
!! ATGAGACTGGCACCGATTCG+GGG - Chr2:18992375-18992394 None:intergenic 55.0%
!! GAATCGGTGCCAGTCTCATC+AGG + Chr2:18992376-18992395 MsG0280007676.01.T01:CDS 55.0%
!! GATGAGACTGGCACCGATTC+GGG - Chr2:18992376-18992395 None:intergenic 55.0%
!! TCCTCTGGATTAGCTCGTGG+TGG + Chr2:18994897-18994916 MsG0280007676.01.T01:CDS 55.0%
AACAGGGAGGAGGTCCCTCA+TGG + Chr2:18994058-18994077 MsG0280007676.01.T01:intron 60.0%
!! CACCGATTCGGGGATCAGTG+AGG - Chr2:18992365-18992384 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 18992171 18995061 18992171 ID=MsG0280007676.01;Name=MsG0280007676.01
Chr2 mRNA 18992171 18995061 18992171 ID=MsG0280007676.01.T01;Parent=MsG0280007676.01;Name=MsG0280007676.01.T01;_AED=0.48;_eAED=0.48;_QI=45|1|1|1|1|1|4|111|345
Chr2 exon 18992171 18992425 18992171 ID=MsG0280007676.01.T01:exon:10082;Parent=MsG0280007676.01.T01
Chr2 exon 18993031 18993222 18993031 ID=MsG0280007676.01.T01:exon:10083;Parent=MsG0280007676.01.T01
Chr2 exon 18994063 18994228 18994063 ID=MsG0280007676.01.T01:exon:10084;Parent=MsG0280007676.01.T01
Chr2 exon 18994481 18995061 18994481 ID=MsG0280007676.01.T01:exon:10085;Parent=MsG0280007676.01.T01
Chr2 five_prime_UTR 18992171 18992215 18992171 ID=MsG0280007676.01.T01:five_prime_utr;Parent=MsG0280007676.01.T01
Chr2 CDS 18992216 18992425 18992216 ID=MsG0280007676.01.T01:cds;Parent=MsG0280007676.01.T01
Chr2 CDS 18993031 18993222 18993031 ID=MsG0280007676.01.T01:cds;Parent=MsG0280007676.01.T01
Chr2 CDS 18994063 18994228 18994063 ID=MsG0280007676.01.T01:cds;Parent=MsG0280007676.01.T01
Chr2 CDS 18994481 18994950 18994481 ID=MsG0280007676.01.T01:cds;Parent=MsG0280007676.01.T01
Chr2 three_prime_UTR 18994951 18995061 18994951 ID=MsG0280007676.01.T01:three_prime_utr;Parent=MsG0280007676.01.T01
Gene Sequence

>MsG0280007676.01.T01

ATGGGTTCCATGCGTGTTGTACTAGGGTTGGCACTTTGGTGTGCATTTGTGATGCATGGAGGGTATGGTTGGCTCAGTCCATCATTCTACAGTGAAACATGTCCAGATCTATACCCTATTGTGTTTAGAGTCATATTTGAGGCTTCCCTCACTGATCCCCGAATCGGTGCCAGTCTCATCAGGCTTCATTTTCACGATTGCTTTGTTCAAGGCTGCGATGGATCAGTTTTGTTGAACAACACTGATACAATTGTAAGTGAGCAAGATGCATTTCCAAACAGAAACTCATTAAGGGGTTTGGATGTTGTGAATCAAATCAAGACAGCAGTTGAAGAAGAATGTCCTAACACTGTTTCTTGTGCTGATATTCTTACCATTGCTGCTGAAGTATCTTCTATTTTGGGAGGAGGTCCCTCATGGCCAATTCCATTGGGAAGAAGGGATAGCTTAACCGCAAACATAACTCTTGCAAATCAAAACCTTCCCGGACCCTTCTCTACATTGGATCAACTTAAAGCTTCATTTCTTGTTCAAGGTCTCAACACTACAGATTTAGTTACACTCTCAGGTGCTCATACATTTGGAAGAGCTCGTTGCAGTACATTCATCAACCGTCTATACAATTTCAGTGGCACTGGAAATCCTGATCCAACACTAAACACAACTTACTTACAAACATTGCGTCTGATATGTCCCCAAAACTCAACAGGAAACAACCTAGCCAATTTGGACCTTACCACACCTAATCACTTTGATAACAAATATTACTCCAATCTTCAAAACCTCAATGGCTTACTTCGAAGTGATCAAGTGCTATTCTCCACTCCTAATGCAGATACCATTGCCATTGTTAATAGCTTTAGCAGAAACCAAACTCTCTTCTTTCAGAATTTTAGTGTGTCGATGATTAGAATGGCGAATATTGGAGTGTTAACTGGTGATGAAGGGGAAATTAGGTTGCAATGTAATTTTGTAAATGGTAACTCCTCTGGATTAGCTCGTGGTGGATCAAAAGATGGCTTGTTAAGCTCATTCTAA
Protein sequence

>MsG0280007676.01.T01

MGSMRVVLGLALWCAFVMHGGYGWLSPSFYSETCPDLYPIVFRVIFEASLTDPRIGASLIRLHFHDCFVQGCDGSVLLNNTDTIVSEQDAFPNRNSLRGLDVVNQIKTAVEEECPNTVSCADILTIAAEVSSILGGGPSWPIPLGRRDSLTANITLANQNLPGPFSTLDQLKASFLVQGLNTTDLVTLSGAHTFGRARCSTFINRLYNFSGTGNPDPTLNTTYLQTLRLICPQNSTGNNLANLDLTTPNHFDNKYYSNLQNLNGLLRSDQVLFSTPNADTIAIVNSFSRNQTLFFQNFSVSMIRMANIGVLTGDEGEIRLQCNFVNGNSSGLARGGSKDGLLSSF*