Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010152.01.T01 | XP_013464639.1 | 98.392 | 311 | 5 | 0 | 1 | 311 | 1 | 311 | 0 | 632 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010152.01.T01 | O81755 | 36.858 | 331 | 155 | 5 | 309 | 588 | 72 | 399 | 7.80E-56 | 197 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010152.01.T01 | A0A072V9E4 | 98.392 | 311 | 5 | 0 | 1 | 311 | 1 | 311 | 0.0 | 632 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180004249.01 | MsG0280010152.01 | 0.805842 | 1.098367e-49 | 5.871671e-47 |
MsG0180004725.01 | MsG0280010152.01 | 0.805520 | 1.283236e-49 | 6.803042e-47 |
MsG0180005397.01 | MsG0280010152.01 | 0.831635 | 1.492571e-55 | 1.629215e-52 |
MsG0180006017.01 | MsG0280010152.01 | 0.800504 | 1.397075e-48 | 6.515934e-46 |
MsG0180006243.01 | MsG0280010152.01 | 0.808039 | 3.766398e-50 | 2.130975e-47 |
MsG0280007506.01 | MsG0280010152.01 | 0.808882 | 2.488935e-50 | 1.439721e-47 |
MsG0280008363.01 | MsG0280010152.01 | 0.800268 | 1.560950e-48 | 7.236942e-46 |
MsG0280008738.01 | MsG0280010152.01 | 0.820359 | 7.152470e-53 | 5.646902e-50 |
MsG0280010152.01 | MsG0280010517.01 | 0.804840 | 1.781129e-49 | 9.279815e-47 |
MsG0280010152.01 | MsG0380014875.01 | 0.802418 | 5.662794e-49 | 2.772655e-46 |
MsG0280010152.01 | MsG0480022514.01 | 0.834128 | 3.585427e-56 | 4.215300e-53 |
MsG0280010152.01 | MsG0480022672.01 | 0.808149 | 3.569396e-50 | 2.025505e-47 |
MsG0280010152.01 | MsG0480022916.01 | 0.818289 | 2.118800e-52 | 1.579429e-49 |
MsG0280010152.01 | MsG0480023356.01 | 0.801119 | 1.046709e-48 | 4.958744e-46 |
MsG0280010152.01 | MsG0580028960.01 | 0.801922 | 7.164275e-49 | 3.463532e-46 |
MsG0280010152.01 | MsG0580029647.01 | 0.812211 | 4.750852e-51 | 3.002400e-48 |
MsG0280010152.01 | MsG0680034235.01 | 0.809179 | 2.150244e-50 | 1.253802e-47 |
MsG0280010152.01 | MsG0680034913.01 | 0.814050 | 1.876422e-51 | 1.245883e-48 |
MsG0280010152.01 | MsG0780036307.01 | 0.802049 | 6.745767e-49 | 3.271837e-46 |
MsG0280010152.01 | MsG0780039155.01 | 0.818937 | 1.510404e-52 | 1.146430e-49 |
MsG0280010152.01 | MsG0780039369.01 | 0.801537 | 8.593141e-49 | 4.114013e-46 |
MsG0280010152.01 | MsG0780040430.01 | 0.815329 | 9.775461e-52 | 6.719622e-49 |
MsG0280010152.01 | MsG0780041387.01 | 0.836843 | 7.380515e-57 | 9.414925e-54 |
MsG0280010152.01 | MsG0780041698.01 | 0.805514 | 1.286588e-49 | 6.819847e-47 |
MsG0280010152.01 | MsG0780041699.01 | 0.813411 | 2.594523e-51 | 1.693157e-48 |
MsG0280010152.01 | MsG0880042857.01 | 0.819306 | 1.244440e-52 | 9.540430e-50 |
MsG0280010152.01 | MsG0880044067.01 | 0.802302 | 5.982852e-49 | 2.920762e-46 |
MsG0280010152.01 | MsG0880044975.01 | 0.802376 | 5.777784e-49 | 2.825919e-46 |
MsG0280010152.01 | MsG0880045716.01 | 0.800471 | 1.419378e-48 | 6.614251e-46 |
MsG0280010152.01 | MsG0880045765.01 | 0.804859 | 1.764237e-49 | 9.196520e-47 |
MsG0280010152.01 | MsG0880046457.01 | 0.802549 | 5.321915e-49 | 2.614288e-46 |
MsG0280010152.01 | MsG0880046517.01 | 0.822607 | 2.164155e-53 | 1.820361e-50 |
MsG0280010152.01 | MsG0880046901.01 | 0.807893 | 4.046158e-50 | 2.280406e-47 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0280010152.01 | MsG0280007689.01 | PPI |
MsG0280010152.01 | MsG0280007677.01 | PPI |
MsG0280010152.01 | MsG0280007685.01 | PPI |
MsG0280010152.01 | MsG0280007676.01 | PPI |
MsG0280010152.01 | MsG0680032464.01 | PPI |
MsG0280010152.01 | MsG0280007670.01 | PPI |
MsG0280010152.01 | MsG0680032461.01 | PPI |
MsG0280010152.01 | MsG0280007688.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010152.01.T01 | MTR_2g078620 | 98.392 | 311 | 5 | 0 | 1 | 311 | 1 | 311 | 0.0 | 632 |
MsG0280010152.01.T01 | MTR_2g077990 | 80.793 | 328 | 16 | 2 | 311 | 592 | 82 | 408 | 0.0 | 527 |
MsG0280010152.01.T01 | MTR_2g078610 | 80.488 | 328 | 17 | 2 | 311 | 592 | 82 | 408 | 0.0 | 522 |
MsG0280010152.01.T01 | MTR_2g078280 | 80.128 | 312 | 15 | 2 | 311 | 576 | 82 | 392 | 2.80e-173 | 497 |
MsG0280010152.01.T01 | MTR_2g067440 | 76.829 | 328 | 26 | 3 | 311 | 592 | 66 | 389 | 1.43e-171 | 492 |
MsG0280010152.01.T01 | MTR_2g067450 | 66.463 | 328 | 32 | 4 | 311 | 592 | 17 | 312 | 1.71e-139 | 407 |
MsG0280010152.01.T01 | MTR_2g078560 | 92.611 | 203 | 15 | 0 | 390 | 592 | 120 | 322 | 4.73e-135 | 397 |
MsG0280010152.01.T01 | MTR_2g077980 | 65.724 | 283 | 41 | 3 | 364 | 592 | 6 | 286 | 2.40e-116 | 347 |
MsG0280010152.01.T01 | MTR_0147s0010 | 35.077 | 325 | 137 | 8 | 311 | 588 | 83 | 380 | 4.62e-42 | 156 |
MsG0280010152.01.T01 | MTR_4g114210 | 31.193 | 327 | 141 | 6 | 312 | 589 | 28 | 319 | 8.01e-41 | 151 |
MsG0280010152.01.T01 | MTR_2g008710 | 31.385 | 325 | 140 | 7 | 313 | 589 | 35 | 324 | 7.29e-40 | 148 |
MsG0280010152.01.T01 | MTR_7g093370 | 29.755 | 326 | 148 | 7 | 312 | 588 | 76 | 369 | 1.19e-39 | 149 |
MsG0280010152.01.T01 | MTR_1g054205 | 29.052 | 327 | 151 | 8 | 311 | 588 | 30 | 324 | 1.07e-38 | 145 |
MsG0280010152.01.T01 | MTR_1g115900 | 30.702 | 342 | 151 | 9 | 298 | 592 | 20 | 322 | 4.19e-37 | 141 |
MsG0280010152.01.T01 | MTR_2g040000 | 28.746 | 327 | 148 | 6 | 311 | 586 | 35 | 327 | 4.21e-37 | 141 |
MsG0280010152.01.T01 | MTR_3g466180 | 30.650 | 323 | 137 | 7 | 313 | 588 | 39 | 321 | 1.88e-36 | 139 |
MsG0280010152.01.T01 | MTR_4g125940 | 29.358 | 327 | 145 | 8 | 311 | 586 | 34 | 325 | 7.74e-36 | 137 |
MsG0280010152.01.T01 | MTR_3g094670 | 28.349 | 321 | 145 | 7 | 313 | 586 | 36 | 318 | 1.89e-35 | 136 |
MsG0280010152.01.T01 | MTR_3g094650 | 28.483 | 323 | 146 | 8 | 313 | 588 | 36 | 320 | 5.83e-35 | 134 |
MsG0280010152.01.T01 | MTR_5g021060 | 28.528 | 326 | 152 | 8 | 312 | 589 | 37 | 329 | 6.81e-35 | 135 |
MsG0280010152.01.T01 | MTR_2g084080 | 28.972 | 321 | 141 | 8 | 313 | 586 | 33 | 313 | 2.43e-34 | 133 |
MsG0280010152.01.T01 | MTR_4g133800 | 29.538 | 325 | 144 | 8 | 309 | 587 | 45 | 330 | 3.31e-34 | 133 |
MsG0280010152.01.T01 | MTR_2g437770 | 29.697 | 330 | 145 | 8 | 309 | 592 | 54 | 342 | 3.79e-34 | 133 |
MsG0280010152.01.T01 | MTR_2g084110 | 28.660 | 321 | 142 | 8 | 313 | 586 | 33 | 313 | 4.48e-34 | 132 |
MsG0280010152.01.T01 | MTR_2g084090 | 28.972 | 321 | 142 | 7 | 313 | 586 | 33 | 314 | 4.63e-34 | 132 |
MsG0280010152.01.T01 | MTR_4g029200 | 30.321 | 343 | 147 | 8 | 293 | 588 | 39 | 336 | 5.75e-34 | 132 |
MsG0280010152.01.T01 | MTR_7g107520 | 28.615 | 325 | 154 | 5 | 307 | 587 | 27 | 317 | 1.48e-33 | 130 |
MsG0280010152.01.T01 | MTR_8g076820 | 28.261 | 322 | 150 | 8 | 313 | 586 | 38 | 326 | 1.54e-33 | 131 |
MsG0280010152.01.T01 | MTR_2g029800 | 28.097 | 331 | 155 | 9 | 311 | 592 | 35 | 331 | 5.55e-33 | 130 |
MsG0280010152.01.T01 | MTR_4g125940 | 29.126 | 309 | 132 | 9 | 335 | 592 | 3 | 275 | 1.31e-32 | 127 |
MsG0280010152.01.T01 | MTR_2g029730 | 29.938 | 324 | 145 | 10 | 313 | 587 | 33 | 323 | 1.82e-32 | 128 |
MsG0280010152.01.T01 | MTR_5g017860 | 28.438 | 320 | 151 | 6 | 313 | 586 | 35 | 322 | 3.44e-32 | 127 |
MsG0280010152.01.T01 | MTR_4g029190 | 29.664 | 327 | 145 | 8 | 309 | 588 | 50 | 338 | 4.97e-32 | 127 |
MsG0280010152.01.T01 | MTR_7g086870 | 28.972 | 321 | 144 | 8 | 313 | 589 | 30 | 310 | 5.08e-32 | 126 |
MsG0280010152.01.T01 | MTR_0155s0040 | 27.744 | 328 | 146 | 7 | 309 | 589 | 31 | 314 | 5.36e-32 | 126 |
MsG0280010152.01.T01 | MTR_7g072510 | 31.333 | 300 | 117 | 9 | 335 | 586 | 50 | 308 | 5.61e-32 | 126 |
MsG0280010152.01.T01 | MTR_3g094630 | 28.173 | 323 | 147 | 7 | 313 | 588 | 36 | 320 | 6.39e-32 | 126 |
MsG0280010152.01.T01 | MTR_4g029170 | 28.923 | 325 | 142 | 7 | 313 | 588 | 35 | 319 | 8.23e-32 | 125 |
MsG0280010152.01.T01 | MTR_2g099175 | 28.261 | 322 | 157 | 6 | 309 | 586 | 40 | 331 | 1.19e-31 | 125 |
MsG0280010152.01.T01 | MTR_7g072480 | 28.972 | 321 | 141 | 8 | 313 | 586 | 32 | 312 | 1.24e-31 | 125 |
MsG0280010152.01.T01 | MTR_2g084010 | 28.261 | 322 | 143 | 8 | 313 | 586 | 33 | 314 | 1.59e-31 | 125 |
MsG0280010152.01.T01 | MTR_2g029740 | 27.160 | 324 | 154 | 7 | 313 | 587 | 37 | 327 | 1.85e-31 | 125 |
MsG0280010152.01.T01 | MTR_1g066710 | 29.012 | 324 | 152 | 10 | 313 | 592 | 35 | 324 | 2.01e-31 | 125 |
MsG0280010152.01.T01 | MTR_2g088770 | 28.571 | 322 | 150 | 5 | 313 | 587 | 34 | 322 | 2.90e-31 | 124 |
MsG0280010152.01.T01 | MTR_5g017850 | 27.500 | 320 | 154 | 6 | 313 | 586 | 35 | 322 | 4.54e-31 | 124 |
MsG0280010152.01.T01 | MTR_5g083860 | 28.135 | 327 | 150 | 7 | 307 | 586 | 33 | 321 | 5.62e-31 | 123 |
MsG0280010152.01.T01 | MTR_7g086820 | 27.726 | 321 | 151 | 7 | 313 | 589 | 28 | 311 | 6.14e-31 | 123 |
MsG0280010152.01.T01 | MTR_2g029750 | 27.160 | 324 | 154 | 7 | 313 | 587 | 37 | 327 | 1.32e-30 | 123 |
MsG0280010152.01.T01 | MTR_4g046713 | 30.435 | 322 | 144 | 8 | 313 | 587 | 35 | 323 | 2.32e-30 | 122 |
MsG0280010152.01.T01 | MTR_6g043460 | 30.530 | 321 | 136 | 10 | 313 | 586 | 44 | 324 | 3.30e-30 | 122 |
MsG0280010152.01.T01 | MTR_1g077000 | 27.301 | 326 | 142 | 7 | 313 | 589 | 47 | 326 | 3.92e-30 | 121 |
MsG0280010152.01.T01 | MTR_2g029850 | 29.538 | 325 | 147 | 11 | 311 | 586 | 35 | 326 | 5.80e-30 | 121 |
MsG0280010152.01.T01 | MTR_2g029910 | 29.819 | 332 | 149 | 12 | 311 | 592 | 36 | 333 | 6.38e-30 | 121 |
MsG0280010152.01.T01 | MTR_4g029180 | 28.000 | 325 | 145 | 7 | 313 | 588 | 35 | 319 | 6.73e-30 | 120 |
MsG0280010152.01.T01 | MTR_1g009750 | 28.025 | 314 | 155 | 6 | 309 | 587 | 31 | 308 | 7.43e-30 | 120 |
MsG0280010152.01.T01 | MTR_6g027440 | 29.283 | 321 | 147 | 7 | 313 | 589 | 29 | 313 | 9.07e-30 | 120 |
MsG0280010152.01.T01 | MTR_5g014100 | 28.909 | 339 | 154 | 10 | 306 | 591 | 27 | 331 | 1.12e-29 | 120 |
MsG0280010152.01.T01 | MTR_7g026990 | 28.529 | 333 | 149 | 8 | 307 | 592 | 33 | 323 | 1.24e-29 | 119 |
MsG0280010152.01.T01 | MTR_2g028980 | 28.704 | 324 | 149 | 11 | 313 | 587 | 37 | 327 | 2.08e-29 | 120 |
MsG0280010152.01.T01 | MTR_1g101830 | 26.205 | 332 | 164 | 6 | 301 | 586 | 22 | 318 | 2.63e-29 | 119 |
MsG0280010152.01.T01 | MTR_2g084020 | 27.640 | 322 | 145 | 8 | 313 | 586 | 33 | 314 | 2.92e-29 | 118 |
MsG0280010152.01.T01 | MTR_3g466200 | 27.778 | 324 | 148 | 8 | 314 | 589 | 34 | 319 | 7.83e-29 | 117 |
MsG0280010152.01.T01 | MTR_2g084000 | 27.019 | 322 | 147 | 8 | 313 | 586 | 34 | 315 | 8.29e-29 | 117 |
MsG0280010152.01.T01 | MTR_5g016010 | 25.982 | 331 | 162 | 7 | 307 | 587 | 29 | 326 | 9.48e-29 | 117 |
MsG0280010152.01.T01 | MTR_2g029560 | 26.235 | 324 | 157 | 7 | 313 | 587 | 32 | 322 | 1.54e-28 | 117 |
MsG0280010152.01.T01 | MTR_1g038680 | 27.554 | 323 | 156 | 5 | 313 | 587 | 37 | 329 | 2.55e-28 | 116 |
MsG0280010152.01.T01 | MTR_1g025980 | 26.935 | 323 | 155 | 8 | 309 | 586 | 28 | 314 | 3.62e-28 | 115 |
MsG0280010152.01.T01 | MTR_1g022970 | 32.308 | 325 | 138 | 9 | 313 | 588 | 54 | 345 | 3.70e-28 | 116 |
MsG0280010152.01.T01 | MTR_4g074995 | 28.710 | 310 | 150 | 9 | 313 | 587 | 32 | 305 | 7.66e-28 | 114 |
MsG0280010152.01.T01 | MTR_5g074860 | 27.679 | 336 | 149 | 10 | 306 | 588 | 29 | 323 | 9.63e-28 | 114 |
MsG0280010152.01.T01 | MTR_1g009750 | 26.444 | 329 | 158 | 6 | 309 | 587 | 31 | 325 | 1.72e-27 | 114 |
MsG0280010152.01.T01 | MTR_1g090760 | 27.964 | 329 | 158 | 7 | 309 | 589 | 32 | 329 | 1.76e-27 | 114 |
MsG0280010152.01.T01 | MTR_5g074740 | 28.440 | 327 | 141 | 9 | 314 | 588 | 34 | 319 | 2.71e-27 | 113 |
MsG0280010152.01.T01 | MTR_1g086490 | 29.003 | 331 | 152 | 7 | 311 | 587 | 36 | 337 | 3.36e-27 | 113 |
MsG0280010152.01.T01 | MTR_6g043240 | 25.237 | 317 | 157 | 5 | 313 | 587 | 50 | 328 | 3.83e-27 | 113 |
MsG0280010152.01.T01 | MTR_5g074970 | 27.554 | 323 | 149 | 7 | 314 | 588 | 39 | 324 | 5.14e-27 | 112 |
MsG0280010152.01.T01 | MTR_4g083710 | 27.554 | 323 | 150 | 9 | 313 | 587 | 35 | 321 | 9.50e-27 | 111 |
MsG0280010152.01.T01 | MTR_4g030890 | 28.349 | 321 | 147 | 7 | 313 | 586 | 108 | 392 | 9.54e-27 | 113 |
MsG0280010152.01.T01 | MTR_5g074760 | 27.523 | 327 | 144 | 9 | 314 | 588 | 34 | 319 | 1.20e-26 | 111 |
MsG0280010152.01.T01 | MTR_7g029030 | 26.606 | 327 | 150 | 8 | 313 | 589 | 33 | 319 | 1.54e-26 | 110 |
MsG0280010152.01.T01 | MTR_4g122640 | 28.882 | 322 | 146 | 9 | 313 | 586 | 46 | 332 | 1.59e-26 | 111 |
MsG0280010152.01.T01 | MTR_8g062780 | 27.964 | 329 | 157 | 7 | 309 | 589 | 27 | 323 | 2.01e-26 | 110 |
MsG0280010152.01.T01 | MTR_2g067350 | 80.303 | 66 | 11 | 1 | 529 | 592 | 12 | 77 | 2.45e-26 | 102 |
MsG0280010152.01.T01 | MTR_4g132110 | 25.846 | 325 | 160 | 6 | 309 | 587 | 36 | 325 | 2.96e-26 | 110 |
MsG0280010152.01.T01 | MTR_4g087965 | 25.915 | 328 | 164 | 6 | 309 | 587 | 46 | 343 | 3.21e-26 | 110 |
MsG0280010152.01.T01 | MTR_4g127670 | 26.748 | 329 | 151 | 7 | 312 | 588 | 31 | 321 | 4.38e-26 | 109 |
MsG0280010152.01.T01 | MTR_1g086320 | 26.687 | 326 | 159 | 6 | 311 | 587 | 36 | 330 | 8.39e-26 | 108 |
MsG0280010152.01.T01 | MTR_1g066640 | 27.439 | 328 | 160 | 10 | 309 | 592 | 31 | 324 | 9.10e-26 | 108 |
MsG0280010152.01.T01 | MTR_5g074710 | 26.816 | 358 | 164 | 11 | 283 | 588 | 8 | 319 | 1.41e-25 | 108 |
MsG0280010152.01.T01 | MTR_2g008730 | 29.630 | 297 | 158 | 6 | 313 | 589 | 35 | 300 | 1.96e-25 | 107 |
MsG0280010152.01.T01 | MTR_3g072190 | 27.596 | 337 | 155 | 9 | 303 | 589 | 20 | 317 | 2.93e-25 | 107 |
MsG0280010152.01.T01 | MTR_4g132110 | 25.602 | 332 | 157 | 7 | 309 | 587 | 36 | 330 | 4.47e-25 | 107 |
MsG0280010152.01.T01 | MTR_5g049280 | 27.976 | 336 | 156 | 12 | 309 | 592 | 37 | 338 | 7.85e-25 | 106 |
MsG0280010152.01.T01 | MTR_4g095450 | 29.043 | 303 | 179 | 11 | 309 | 587 | 31 | 321 | 3.99e-24 | 103 |
MsG0280010152.01.T01 | MTR_5g074860 | 31.438 | 299 | 146 | 15 | 306 | 588 | 29 | 284 | 9.26e-24 | 102 |
MsG0280010152.01.T01 | MTR_1g066680 | 27.134 | 328 | 160 | 12 | 309 | 592 | 31 | 323 | 1.02e-23 | 102 |
MsG0280010152.01.T01 | MTR_4g074990 | 25.155 | 322 | 143 | 9 | 313 | 587 | 32 | 302 | 3.82e-20 | 91.7 |
MsG0280010152.01.T01 | MTR_2g067310 | 79.630 | 54 | 11 | 0 | 529 | 582 | 8 | 61 | 7.50e-20 | 89.7 |
MsG0280010152.01.T01 | MTR_2g029880 | 28.141 | 199 | 99 | 4 | 396 | 592 | 33 | 189 | 1.01e-18 | 85.5 |
MsG0280010152.01.T01 | MTR_4g074980 | 24.534 | 322 | 133 | 9 | 313 | 587 | 33 | 291 | 9.00e-18 | 84.7 |
MsG0280010152.01.T01 | MTR_4g074980 | 26.829 | 205 | 95 | 4 | 313 | 470 | 33 | 229 | 3.87e-15 | 75.9 |
MsG0280010152.01.T01 | MTR_2g067360 | 63.077 | 65 | 20 | 3 | 454 | 518 | 33 | 93 | 1.43e-14 | 70.1 |
MsG0280010152.01.T01 | MTR_0147s0040 | 48.052 | 77 | 39 | 1 | 512 | 588 | 6 | 81 | 2.27e-14 | 68.9 |
MsG0280010152.01.T01 | MTR_4g012865 | 60.000 | 50 | 20 | 0 | 311 | 360 | 83 | 132 | 1.38e-13 | 68.9 |
MsG0280010152.01.T01 | MTR_2g083910 | 42.857 | 105 | 48 | 5 | 225 | 322 | 134 | 233 | 1.88e-13 | 70.5 |
MsG0280010152.01.T01 | MTR_2g016760 | 56.250 | 64 | 24 | 1 | 225 | 284 | 126 | 189 | 7.51e-13 | 70.9 |
MsG0280010152.01.T01 | MTR_2g083910 | 44.681 | 94 | 40 | 5 | 225 | 311 | 134 | 222 | 2.56e-12 | 67.8 |
MsG0280010152.01.T01 | MTR_8g086820 | 40.496 | 121 | 59 | 4 | 216 | 325 | 123 | 241 | 4.79e-12 | 66.6 |
MsG0280010152.01.T01 | MTR_3g072260 | 41.558 | 77 | 44 | 1 | 312 | 388 | 33 | 108 | 1.18e-11 | 63.2 |
MsG0280010152.01.T01 | MTR_5g058120 | 27.749 | 191 | 96 | 4 | 396 | 586 | 7 | 155 | 2.38e-11 | 64.7 |
MsG0280010152.01.T01 | MTR_1g098320 | 40.278 | 72 | 42 | 1 | 516 | 587 | 51 | 121 | 6.87e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010152.01.T01 | AT4G33870 | 36.858 | 331 | 155 | 5 | 309 | 588 | 72 | 399 | 7.95e-57 | 197 |
MsG0280010152.01.T01 | AT4G36430 | 31.003 | 329 | 146 | 7 | 309 | 589 | 34 | 329 | 2.89e-41 | 152 |
MsG0280010152.01.T01 | AT5G64120 | 31.776 | 321 | 135 | 8 | 313 | 587 | 43 | 325 | 1.04e-39 | 148 |
MsG0280010152.01.T01 | AT3G50990 | 29.755 | 326 | 148 | 7 | 311 | 588 | 47 | 339 | 1.68e-38 | 145 |
MsG0280010152.01.T01 | AT1G49570 | 30.178 | 338 | 155 | 7 | 298 | 586 | 41 | 346 | 2.48e-38 | 145 |
MsG0280010152.01.T01 | AT5G17820 | 28.972 | 321 | 144 | 7 | 313 | 589 | 32 | 312 | 6.11e-37 | 140 |
MsG0280010152.01.T01 | AT2G41480 | 31.003 | 329 | 143 | 6 | 309 | 588 | 33 | 326 | 9.97e-37 | 140 |
MsG0280010152.01.T01 | AT5G06720 | 29.846 | 325 | 146 | 8 | 313 | 588 | 40 | 331 | 1.02e-36 | 140 |
MsG0280010152.01.T01 | AT2G18150 | 29.394 | 330 | 152 | 8 | 311 | 592 | 42 | 338 | 2.04e-36 | 139 |
MsG0280010152.01.T01 | AT5G15180 | 29.375 | 320 | 146 | 4 | 313 | 586 | 40 | 325 | 3.96e-36 | 138 |
MsG0280010152.01.T01 | AT5G17820 | 28.972 | 321 | 144 | 7 | 313 | 589 | 85 | 365 | 8.77e-36 | 138 |
MsG0280010152.01.T01 | AT2G18140 | 27.978 | 361 | 178 | 9 | 280 | 592 | 11 | 337 | 1.26e-34 | 134 |
MsG0280010152.01.T01 | AT3G03670 | 28.049 | 328 | 157 | 5 | 308 | 589 | 26 | 320 | 5.60e-34 | 132 |
MsG0280010152.01.T01 | AT1G05240 | 28.746 | 327 | 151 | 6 | 309 | 587 | 30 | 322 | 1.23e-33 | 131 |
MsG0280010152.01.T01 | AT1G05250 | 28.746 | 327 | 151 | 6 | 309 | 587 | 30 | 322 | 1.23e-33 | 131 |
MsG0280010152.01.T01 | AT2G38390 | 29.630 | 324 | 145 | 9 | 313 | 586 | 39 | 329 | 4.13e-33 | 130 |
MsG0280010152.01.T01 | AT3G01190 | 28.302 | 318 | 150 | 5 | 313 | 586 | 34 | 317 | 6.98e-33 | 129 |
MsG0280010152.01.T01 | AT2G35380 | 30.952 | 336 | 151 | 11 | 306 | 591 | 31 | 335 | 7.10e-33 | 129 |
MsG0280010152.01.T01 | AT5G22410 | 26.562 | 320 | 153 | 6 | 314 | 586 | 37 | 321 | 1.08e-32 | 129 |
MsG0280010152.01.T01 | AT2G39040 | 30.154 | 325 | 146 | 7 | 312 | 586 | 53 | 346 | 1.50e-32 | 129 |
MsG0280010152.01.T01 | AT4G08780 | 29.003 | 331 | 150 | 9 | 313 | 592 | 32 | 328 | 3.02e-32 | 127 |
MsG0280010152.01.T01 | AT4G08770 | 29.305 | 331 | 149 | 9 | 313 | 592 | 32 | 328 | 5.52e-32 | 127 |
MsG0280010152.01.T01 | AT5G66390 | 28.704 | 324 | 150 | 9 | 313 | 588 | 41 | 331 | 7.53e-32 | 126 |
MsG0280010152.01.T01 | AT2G43480 | 27.414 | 321 | 158 | 7 | 310 | 586 | 42 | 331 | 1.27e-31 | 125 |
MsG0280010152.01.T01 | AT4G30170 | 26.036 | 338 | 163 | 5 | 301 | 588 | 23 | 323 | 2.63e-31 | 124 |
MsG0280010152.01.T01 | AT5G19890 | 28.704 | 324 | 143 | 10 | 313 | 586 | 38 | 323 | 2.76e-31 | 124 |
MsG0280010152.01.T01 | AT1G05260 | 28.793 | 323 | 150 | 6 | 312 | 587 | 33 | 322 | 3.16e-31 | 124 |
MsG0280010152.01.T01 | AT4G16270 | 30.462 | 325 | 141 | 11 | 311 | 586 | 56 | 344 | 3.39e-31 | 125 |
MsG0280010152.01.T01 | AT5G64110 | 29.538 | 325 | 148 | 7 | 309 | 587 | 38 | 327 | 4.41e-31 | 124 |
MsG0280010152.01.T01 | AT3G21770 | 28.882 | 322 | 149 | 6 | 313 | 587 | 37 | 325 | 4.63e-31 | 124 |
MsG0280010152.01.T01 | AT1G44970 | 29.121 | 364 | 169 | 10 | 272 | 586 | 19 | 342 | 5.20e-31 | 124 |
MsG0280010152.01.T01 | AT5G05340 | 27.245 | 323 | 150 | 8 | 313 | 588 | 38 | 322 | 1.10e-30 | 122 |
MsG0280010152.01.T01 | AT5G06730 | 27.329 | 322 | 154 | 6 | 313 | 586 | 41 | 330 | 2.32e-30 | 122 |
MsG0280010152.01.T01 | AT4G33420 | 28.142 | 366 | 170 | 9 | 266 | 586 | 4 | 321 | 3.16e-30 | 121 |
MsG0280010152.01.T01 | AT5G51890 | 29.305 | 331 | 153 | 10 | 306 | 590 | 26 | 321 | 3.61e-30 | 121 |
MsG0280010152.01.T01 | AT1G30870 | 29.814 | 322 | 141 | 7 | 314 | 588 | 60 | 343 | 4.19e-30 | 122 |
MsG0280010152.01.T01 | AT5G42180 | 27.103 | 321 | 153 | 6 | 313 | 588 | 31 | 315 | 6.08e-30 | 120 |
MsG0280010152.01.T01 | AT4G33420 | 28.142 | 366 | 170 | 9 | 266 | 586 | 51 | 368 | 7.31e-30 | 121 |
MsG0280010152.01.T01 | AT2G37130 | 28.571 | 329 | 154 | 10 | 309 | 591 | 3 | 296 | 7.48e-30 | 119 |
MsG0280010152.01.T01 | AT2G37130 | 28.571 | 329 | 154 | 10 | 309 | 591 | 34 | 327 | 1.02e-29 | 120 |
MsG0280010152.01.T01 | AT1G68850 | 28.869 | 336 | 154 | 11 | 309 | 592 | 34 | 336 | 1.19e-29 | 120 |
MsG0280010152.01.T01 | AT5G64100 | 26.875 | 320 | 151 | 6 | 314 | 587 | 46 | 328 | 1.73e-29 | 119 |
MsG0280010152.01.T01 | AT4G25980 | 28.354 | 328 | 150 | 8 | 312 | 589 | 33 | 325 | 2.14e-29 | 119 |
MsG0280010152.01.T01 | AT5G24070 | 25.155 | 322 | 164 | 6 | 310 | 586 | 42 | 331 | 2.76e-29 | 119 |
MsG0280010152.01.T01 | AT1G14550 | 29.321 | 324 | 141 | 9 | 313 | 587 | 34 | 318 | 5.97e-29 | 117 |
MsG0280010152.01.T01 | AT4G37520 | 26.687 | 326 | 155 | 6 | 313 | 589 | 35 | 325 | 6.82e-29 | 117 |
MsG0280010152.01.T01 | AT4G37520 | 26.444 | 329 | 155 | 6 | 313 | 589 | 35 | 328 | 2.25e-28 | 116 |
MsG0280010152.01.T01 | AT3G49120 | 29.070 | 344 | 158 | 9 | 301 | 592 | 27 | 336 | 3.02e-28 | 116 |
MsG0280010152.01.T01 | AT4G21960 | 28.049 | 328 | 155 | 7 | 306 | 587 | 32 | 324 | 4.53e-28 | 115 |
MsG0280010152.01.T01 | AT2G34060 | 25.753 | 365 | 184 | 10 | 279 | 590 | 16 | 346 | 4.66e-28 | 115 |
MsG0280010152.01.T01 | AT4G11290 | 26.154 | 325 | 156 | 4 | 313 | 587 | 33 | 323 | 7.34e-28 | 114 |
MsG0280010152.01.T01 | AT5G58400 | 27.139 | 339 | 161 | 7 | 298 | 588 | 23 | 323 | 1.55e-27 | 114 |
MsG0280010152.01.T01 | AT1G71695 | 26.380 | 326 | 152 | 6 | 311 | 587 | 50 | 336 | 1.88e-27 | 114 |
MsG0280010152.01.T01 | AT3G49110 | 28.399 | 331 | 152 | 9 | 313 | 592 | 41 | 337 | 4.44e-27 | 113 |
MsG0280010152.01.T01 | AT4G37530 | 26.769 | 325 | 159 | 7 | 313 | 589 | 35 | 328 | 5.58e-27 | 112 |
MsG0280010152.01.T01 | AT5G58390 | 28.834 | 326 | 146 | 7 | 311 | 588 | 27 | 314 | 8.35e-27 | 111 |
MsG0280010152.01.T01 | AT3G32980 | 28.743 | 334 | 149 | 9 | 312 | 592 | 38 | 335 | 1.72e-26 | 111 |
MsG0280010152.01.T01 | AT4G26010 | 27.640 | 322 | 145 | 11 | 313 | 589 | 30 | 308 | 2.77e-26 | 110 |
MsG0280010152.01.T01 | AT4G26010 | 27.640 | 322 | 145 | 11 | 313 | 589 | 58 | 336 | 3.63e-26 | 110 |
MsG0280010152.01.T01 | AT2G22420 | 27.301 | 326 | 154 | 8 | 308 | 586 | 26 | 315 | 4.14e-26 | 109 |
MsG0280010152.01.T01 | AT3G17070 | 26.667 | 330 | 158 | 9 | 309 | 588 | 42 | 337 | 9.36e-26 | 108 |
MsG0280010152.01.T01 | AT2G18980 | 25.305 | 328 | 158 | 5 | 311 | 588 | 31 | 321 | 1.69e-25 | 107 |
MsG0280010152.01.T01 | AT5G14130 | 24.773 | 331 | 166 | 7 | 307 | 589 | 34 | 329 | 1.77e-24 | 105 |
MsG0280010152.01.T01 | AT5G40150 | 30.124 | 322 | 140 | 10 | 313 | 586 | 40 | 324 | 2.86e-24 | 104 |
MsG0280010152.01.T01 | AT5G14130 | 24.773 | 331 | 166 | 7 | 307 | 589 | 75 | 370 | 3.17e-24 | 105 |
MsG0280010152.01.T01 | AT1G14540 | 26.935 | 323 | 149 | 10 | 313 | 587 | 29 | 312 | 1.08e-22 | 99.8 |
MsG0280010152.01.T01 | AT5G47000 | 26.444 | 329 | 158 | 8 | 309 | 589 | 37 | 329 | 3.52e-22 | 98.6 |
MsG0280010152.01.T01 | AT1G77100 | 24.923 | 325 | 156 | 8 | 312 | 587 | 31 | 316 | 2.15e-20 | 92.8 |
MsG0280010152.01.T01 | AT2G24800 | 25.545 | 321 | 160 | 8 | 313 | 587 | 39 | 326 | 3.02e-20 | 92.8 |
MsG0280010152.01.T01 | AT1G24110 | 24.923 | 325 | 163 | 7 | 313 | 589 | 30 | 321 | 5.57e-20 | 91.7 |
MsG0280010152.01.T01 | AT4G37530 | 25.899 | 278 | 128 | 6 | 313 | 542 | 35 | 282 | 1.73e-19 | 89.4 |
MsG0280010152.01.T01 | AT4G31760 | 27.103 | 321 | 154 | 9 | 313 | 587 | 37 | 323 | 1.27e-17 | 84.7 |
MsG0280010152.01.T01 | AT2G35380 | 30.049 | 203 | 110 | 7 | 392 | 591 | 74 | 247 | 2.01e-16 | 79.7 |
MsG0280010152.01.T01 | AT3G17070 | 27.363 | 201 | 108 | 5 | 392 | 588 | 108 | 274 | 4.98e-15 | 76.3 |
MsG0280010152.01.T01 | AT3G15115 | 30.970 | 268 | 134 | 13 | 18 | 241 | 12 | 272 | 6.95e-13 | 70.5 |
MsG0280010152.01.T01 | AT4G25980 | 40.506 | 79 | 43 | 2 | 312 | 390 | 78 | 152 | 2.78e-11 | 65.1 |
MsG0280010152.01.T01 | AT5G39580 | 41.026 | 78 | 41 | 1 | 313 | 390 | 33 | 105 | 4.74e-11 | 63.5 |
Find 122 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACATCTTATTTCCCCAATT+TGG | 0.135591 | 2:+65371670 | None:intergenic |
TCTTCTTCTTTCACTCTAAT+TGG | 0.176697 | 2:+65372986 | None:intergenic |
CAACTCCTCCTGTTCCAAAT+TGG | 0.187842 | 2:-65371684 | MsG0280010152.01.T01:CDS |
CTTAAACAAAGAGGGTATTT+TGG | 0.192411 | 2:-65371941 | MsG0280010152.01.T01:CDS |
TGGAGGCAAGTTGTCATTAT+TGG | 0.201109 | 2:+65372724 | None:intergenic |
AGTTCAAGGGTTCAAGGATT+TGG | 0.219405 | 2:-65371851 | MsG0280010152.01.T01:CDS |
GAATGACACCTTAACATCTT+TGG | 0.264564 | 2:+65373130 | None:intergenic |
GAACAATATCTTCAGCTTTC+GGG | 0.266597 | 2:+65370618 | None:intergenic |
CAAGAAACTGATTCAAGAAT+TGG | 0.268407 | 2:-65372776 | MsG0280010152.01.T01:CDS |
TGACAAAGTTGACTTGATTA+AGG | 0.286349 | 2:-65370237 | MsG0280010152.01.T01:CDS |
GGTGCTCTCTGCAGCTTCTT+AGG | 0.286386 | 2:+65373019 | None:intergenic |
AACTCCTCCTGTTCCAAATT+GGG | 0.290556 | 2:-65371683 | MsG0280010152.01.T01:CDS |
AAACCTTTCAGTGTTTGATT+TGG | 0.292541 | 2:+65370260 | None:intergenic |
TACACATTTGAGGGTAGTTT+TGG | 0.296684 | 2:-65369084 | MsG0280010152.01.T01:three_prime_UTR |
CAGATGACGGATCAACCTTT+TGG | 0.298358 | 2:-65369274 | MsG0280010152.01.T01:CDS |
TTGGTTCATATATTTCATTC+TGG | 0.300342 | 2:-65369144 | MsG0280010152.01.T01:three_prime_UTR |
CTGCACCTCTTCAATCTTAG+AGG | 0.300466 | 2:-65369926 | MsG0280010152.01.T01:CDS |
GTTCAAGGGTTCAAGGATTT+GGG | 0.318307 | 2:-65371850 | MsG0280010152.01.T01:CDS |
GGAGGCAAGTTGTCATTATT+GGG | 0.324183 | 2:+65372725 | None:intergenic |
CGAACAATATCTTCAGCTTT+CGG | 0.327299 | 2:+65370617 | None:intergenic |
CAAGAGCTATTATTATCATT+TGG | 0.336403 | 2:+65373241 | None:intergenic |
ACTCTAATTGGTGGCATAGA+TGG | 0.345119 | 2:+65372998 | None:intergenic |
CCGTCTTTGCCTCCAACAAT+AGG | 0.349930 | 2:-65372815 | MsG0280010152.01.T01:CDS |
ATGTGATGCTTCCTTGCTAT+TGG | 0.356236 | 2:-65370327 | MsG0280010152.01.T01:CDS |
TGAAATCCCTTTGTCGCTAC+TGG | 0.365661 | 2:+65369448 | None:intergenic |
CTGGAATGATGAACATTCAT+TGG | 0.368915 | 2:+65369467 | None:intergenic |
AGCTTAGCTAACATAATTCC+TGG | 0.370469 | 2:-65371796 | MsG0280010152.01.T01:CDS |
GCCTCCAAGGTTAACCTCTA+AGG | 0.388438 | 2:-65372708 | MsG0280010152.01.T01:intron |
TATTGTTCGTTCCGCTGTTA+CGG | 0.393425 | 2:-65370603 | MsG0280010152.01.T01:CDS |
CTTTACGACTTTCAAGGAAC+AGG | 0.395066 | 2:-65369608 | MsG0280010152.01.T01:CDS |
CAAAGGCTTTACGACTTTCA+AGG | 0.395676 | 2:-65369614 | MsG0280010152.01.T01:CDS |
TTGTCATCTGCAGTGCCATC+TGG | 0.398557 | 2:-65369413 | MsG0280010152.01.T01:CDS |
TCCTCTCTCCCTATTGTTGG+AGG | 0.400398 | 2:+65372806 | None:intergenic |
AGGATGAACAAAATCACTAT+TGG | 0.403416 | 2:+65373039 | None:intergenic |
TGGAATAGCCTGCTTCTCAT+AGG | 0.410027 | 2:+65370280 | None:intergenic |
TCCTAAATCAGAAAACAATA+AGG | 0.414045 | 2:-65371903 | MsG0280010152.01.T01:CDS |
GAATCATTCTTACTGTTGTC+AGG | 0.419523 | 2:+65369530 | None:intergenic |
TAACTTAAGAGCTTACAAAT+CGG | 0.427541 | 2:+65369168 | None:intergenic |
TTATTTCCCCAATTTGGAAC+AGG | 0.427610 | 2:+65371676 | None:intergenic |
CAGAGTTTGTTGAGAGGAAG+AGG | 0.433418 | 2:-65369365 | MsG0280010152.01.T01:CDS |
ATATAAAACCAAAGATGTTA+AGG | 0.433545 | 2:-65373138 | MsG0280010152.01.T01:CDS |
TTGTAAGCTCTTAAGTTAGT+TGG | 0.433852 | 2:-65369163 | MsG0280010152.01.T01:exon |
GGAATTATGTTAGCTAAGCT+TGG | 0.440726 | 2:+65371799 | None:intergenic |
CGAAAACGTGCCATTGCTGC+TGG | 0.441017 | 2:+65369508 | None:intergenic |
TCAAGAGAAGACTGCCAGAT+TGG | 0.442700 | 2:-65369312 | MsG0280010152.01.T01:CDS |
TCTTCTTTCACTCTAATTGG+TGG | 0.448745 | 2:+65372989 | None:intergenic |
GTAACATTTGTCACTTTACA+TGG | 0.456344 | 2:+65369061 | None:intergenic |
CTTGAGTATGAAGAAGTTCA+AGG | 0.460785 | 2:-65371865 | MsG0280010152.01.T01:CDS |
ATAGAAGTGATAGCAATAGA+AGG | 0.463972 | 2:-65372859 | MsG0280010152.01.T01:CDS |
CTTTCATGATTGCTTCATCC+AGG | 0.467781 | 2:-65370531 | MsG0280010152.01.T01:intron |
AGAGTTTGTTGAGAGGAAGA+GGG | 0.471781 | 2:-65369364 | MsG0280010152.01.T01:CDS |
CGTCTTTGCCTCCAACAATA+GGG | 0.473582 | 2:-65372814 | MsG0280010152.01.T01:CDS |
ATTAGTCTTGTTGAAGGGTA+AGG | 0.475567 | 2:+65373103 | None:intergenic |
GTAATGCTATCGTCAGGCCT+TGG | 0.479311 | 2:+65369956 | None:intergenic |
ACCTTAGAGGTTAACCTTGG+AGG | 0.482914 | 2:+65372707 | None:intergenic |
GAGCTGATTAGTCTTGTTGA+AGG | 0.486253 | 2:+65373097 | None:intergenic |
TCTGCTTATGCTTCAGATGA+CGG | 0.489775 | 2:-65369287 | MsG0280010152.01.T01:CDS |
TCGAGAGGTATACTCGGATC+TGG | 0.496610 | 2:+65369581 | None:intergenic |
AACTTAAGAGCTTACAAATC+GGG | 0.497617 | 2:+65369169 | None:intergenic |
TGATGCTTCCTTGCTATTGG+AGG | 0.498318 | 2:-65370324 | MsG0280010152.01.T01:CDS |
AGTTTCTCATACACATTTGA+GGG | 0.502926 | 2:-65369093 | MsG0280010152.01.T01:three_prime_UTR |
TTTGACTGGAAATCAAGGTC+AGG | 0.507215 | 2:-65369207 | MsG0280010152.01.T01:CDS |
AAGTTTCTCATACACATTTG+AGG | 0.511157 | 2:-65369094 | MsG0280010152.01.T01:three_prime_UTR |
CGGGAAACAGTCAACCTCCT+TGG | 0.513153 | 2:-65369893 | MsG0280010152.01.T01:intron |
ATCATTCCAGTAGCGACAAA+GGG | 0.513790 | 2:-65369454 | MsG0280010152.01.T01:CDS |
CATCATTCCAGTAGCGACAA+AGG | 0.515954 | 2:-65369455 | MsG0280010152.01.T01:CDS |
AGCATAAGCAGAAACCAATC+TGG | 0.517041 | 2:+65369298 | None:intergenic |
TGAAGAAGTTCAAGGGTTCA+AGG | 0.522733 | 2:-65371857 | MsG0280010152.01.T01:CDS |
AGTACCTTAGAGGTTAACCT+TGG | 0.525551 | 2:+65372704 | None:intergenic |
CATCGGATTCTGCTATGCAC+AGG | 0.526719 | 2:-65372925 | MsG0280010152.01.T01:CDS |
AACCATGCCTCTGATAAGTA+AGG | 0.533103 | 2:+65371721 | None:intergenic |
ATCTTAGAGGATTCAACGCA+CGG | 0.533456 | 2:-65369913 | MsG0280010152.01.T01:CDS |
ATTCCAAATCAAACACTGAA+AGG | 0.537027 | 2:-65370263 | MsG0280010152.01.T01:CDS |
AGTTGACTTGATTAAGGAGG+AGG | 0.538971 | 2:-65370231 | MsG0280010152.01.T01:intron |
GATTTCCAGTCAAAACATCA+AGG | 0.539193 | 2:+65369216 | None:intergenic |
TCATTATTGGGAGGTGTCGA+TGG | 0.539813 | 2:+65372737 | None:intergenic |
AAACGGTTCCTATGAGAAGC+AGG | 0.540154 | 2:-65370288 | MsG0280010152.01.T01:CDS |
CCTATTGTTGGAGGCAAAGA+CGG | 0.541548 | 2:+65372815 | None:intergenic |
GTGCGTGTAATGCTATCGTC+AGG | 0.543199 | 2:+65369950 | None:intergenic |
ATAATGACAACTTGCCTCCA+AGG | 0.544515 | 2:-65372721 | MsG0280010152.01.T01:CDS |
TGAATCTACTTGAAGAGTGT+TGG | 0.552194 | 2:-65373180 | MsG0280010152.01.T01:CDS |
GAGGACAATGGTGATAGAAA+CGG | 0.558413 | 2:-65370305 | MsG0280010152.01.T01:CDS |
AAGAATGATTCCAGCAGCAA+TGG | 0.560203 | 2:-65369518 | MsG0280010152.01.T01:CDS |
TTACTTATCAGAGGCATGGT+TGG | 0.560586 | 2:-65371719 | MsG0280010152.01.T01:CDS |
TGAACAAAATCACTATTGGA+TGG | 0.561406 | 2:+65373043 | None:intergenic |
CATCATTGTGCAAAGATGAA+AGG | 0.561895 | 2:-65372890 | MsG0280010152.01.T01:CDS |
ACTCCTCCTGTTCCAAATTG+GGG | 0.566945 | 2:-65371682 | MsG0280010152.01.T01:CDS |
TCTAAAGGAGGACACAACAT+TGG | 0.569309 | 2:-65369662 | MsG0280010152.01.T01:intron |
CTTCATACTCAAGATCACTT+AGG | 0.571003 | 2:+65371875 | None:intergenic |
CAGCATTCCAAGAAGTAGAC+CGG | 0.572646 | 2:-65371986 | MsG0280010152.01.T01:CDS |
CCTTGCGAAATCCATCCAAA+AGG | 0.573684 | 2:+65369259 | None:intergenic |
GACCTTACTTATCAGAGGCA+TGG | 0.573969 | 2:-65371723 | MsG0280010152.01.T01:CDS |
GATTCTGCTATGCACAGGGC+AGG | 0.574464 | 2:-65372920 | MsG0280010152.01.T01:CDS |
GTTGAAAGCTTAAACAAAGA+GGG | 0.576048 | 2:-65371949 | MsG0280010152.01.T01:CDS |
AGCTGATTAGTCTTGTTGAA+GGG | 0.577448 | 2:+65373098 | None:intergenic |
TTTCCCCAATTTGGAACAGG+AGG | 0.577483 | 2:+65371679 | None:intergenic |
CAAAGTTGACTTGATTAAGG+AGG | 0.582626 | 2:-65370234 | MsG0280010152.01.T01:CDS |
TGTGTATGAGAAACTTACAT+AGG | 0.588393 | 2:+65369101 | None:intergenic |
GTTGCGATTTCATTCAGCAA+AGG | 0.590568 | 2:-65369631 | MsG0280010152.01.T01:CDS |
ACCATTGTCCTCCAATAGCA+AGG | 0.592588 | 2:+65370316 | None:intergenic |
AGGCAACTGATCAGATTCCA+AGG | 0.594430 | 2:-65369973 | MsG0280010152.01.T01:CDS |
GTTTGCTGATCAACAGCTGA+TGG | 0.595102 | 2:-65369336 | MsG0280010152.01.T01:CDS |
AAGAAGAGACGAAGAAGAGA+AGG | 0.596825 | 2:+65370551 | None:intergenic |
GCCTCCAACAATAGGGAGAG+AGG | 0.599344 | 2:-65372807 | MsG0280010152.01.T01:CDS |
GACGAAGAAGAGAAGGTGCA+AGG | 0.601488 | 2:+65370558 | None:intergenic |
AGTTGAAAGCTTAAACAAAG+AGG | 0.608171 | 2:-65371950 | MsG0280010152.01.T01:CDS |
TTGAGTATGAAGAAGTTCAA+GGG | 0.610506 | 2:-65371864 | MsG0280010152.01.T01:CDS |
GAGGAAGATAAAGCAGCAAG+AGG | 0.618815 | 2:-65371745 | MsG0280010152.01.T01:CDS |
TTTACGACTTTCAAGGAACA+GGG | 0.619585 | 2:-65369607 | MsG0280010152.01.T01:CDS |
AAAATTGGTGCATCAAACAT+CGG | 0.619857 | 2:-65372942 | MsG0280010152.01.T01:CDS |
TGAATCCTCTAAGATTGAAG+AGG | 0.625004 | 2:+65369921 | None:intergenic |
GGCAAGTTGTCATTATTGGG+AGG | 0.626871 | 2:+65372728 | None:intergenic |
GTGTCAAAAGATGCTCCAGA+TGG | 0.631259 | 2:+65369398 | None:intergenic |
ATCGGATTCTGCTATGCACA+GGG | 0.632753 | 2:-65372924 | MsG0280010152.01.T01:CDS |
AGAAAATCGAGAGGTATACT+CGG | 0.640889 | 2:+65369575 | None:intergenic |
AAGAGGACCTTACTTATCAG+AGG | 0.645280 | 2:-65371728 | MsG0280010152.01.T01:CDS |
TGTAAAGTAATTTACCAAGG+AGG | 0.651401 | 2:+65369879 | None:intergenic |
TACTATCAGAGTTTGTTGAG+AGG | 0.661163 | 2:-65369371 | MsG0280010152.01.T01:CDS |
TCTTAGAGGATTCAACGCAC+GGG | 0.662298 | 2:-65369912 | MsG0280010152.01.T01:CDS |
TCCTTGCTATTGGAGGACAA+TGG | 0.673992 | 2:-65370317 | MsG0280010152.01.T01:CDS |
ATCTGACTAAGAAAATCGAG+AGG | 0.688017 | 2:+65369566 | None:intergenic |
AAAGTAGATATCCGTAACAG+CGG | 0.689064 | 2:+65370592 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATGAATATAATATGATA+AGG | - | Chr2:65372474-65372493 | MsG0280010152.01.T01:intron | 10.0% |
!! | ACTAACTATATTTATTCTAA+TGG | + | Chr2:65371118-65371137 | None:intergenic | 15.0% |
!! | ACTTAAATGCTAAAATTATT+TGG | + | Chr2:65369955-65369974 | None:intergenic | 15.0% |
!! | ATAGAAATTATATTGAAGAT+TGG | + | Chr2:65371673-65371692 | None:intergenic | 15.0% |
!! | ATCTTCAATATAATTTCTAT+AGG | - | Chr2:65371673-65371692 | MsG0280010152.01.T01:CDS | 15.0% |
!! | CTAACTATATTTATTCTAAT+GGG | + | Chr2:65371117-65371136 | None:intergenic | 15.0% |
!! | TAATATCAATCATAAATTCT+TGG | + | Chr2:65369881-65369900 | None:intergenic | 15.0% |
!! | TCTTCAATATAATTTCTATA+GGG | - | Chr2:65371674-65371693 | MsG0280010152.01.T01:CDS | 15.0% |
!! | TGACATAATGATTTAAAAAA+AGG | + | Chr2:65369855-65369874 | None:intergenic | 15.0% |
!! | AAAGAAAAAAAAAACATGGT+CGG | + | Chr2:65370951-65370970 | None:intergenic | 20.0% |
!! | AACACCAATTAATACAAATA+TGG | - | Chr2:65369921-65369940 | MsG0280010152.01.T01:CDS | 20.0% |
!! | ATAGCATTAGAAATAGAAAA+GGG | - | Chr2:65369981-65370000 | MsG0280010152.01.T01:intron | 20.0% |
!! | ATATAAAACCAAAGATGTTA+AGG | - | Chr2:65369184-65369203 | MsG0280010152.01.T01:CDS | 20.0% |
!! | ATGATCAATCAAAATATGAT+TGG | + | Chr2:65370158-65370177 | None:intergenic | 20.0% |
!! | ATTCTTTGATTGAAATCAAA+TGG | + | Chr2:65371639-65371658 | None:intergenic | 20.0% |
!! | ATTTGACTAATGATATATGT+TGG | - | Chr2:65372626-65372645 | MsG0280010152.01.T01:intron | 20.0% |
!! | GAAGAAAAAGATGATAAAAA+AGG | - | Chr2:65369354-65369373 | MsG0280010152.01.T01:CDS | 20.0% |
!! | TATATCATTAGTCAAATTCA+AGG | + | Chr2:65372623-65372642 | None:intergenic | 20.0% |
!! | TGATAAAAAAGGAAGAAAAT+TGG | - | Chr2:65369365-65369384 | MsG0280010152.01.T01:CDS | 20.0% |
!! | TGGAAAAGAAAAAAAAAACA+TGG | + | Chr2:65370955-65370974 | None:intergenic | 20.0% |
!! | TTAATACAAATATGGCTAAA+AGG | - | Chr2:65369929-65369948 | MsG0280010152.01.T01:CDS | 20.0% |
!! | TTAGCCATATTTGTATTAAT+TGG | + | Chr2:65369928-65369947 | None:intergenic | 20.0% |
!! | TTTGATTATATTTACTGCAT+AGG | - | Chr2:65371862-65371881 | MsG0280010152.01.T01:CDS | 20.0% |
!!! | ATACTCTTTTTATATAGGAA+AGG | + | Chr2:65371350-65371369 | None:intergenic | 20.0% |
!!! | ATATGATAAGGTATTATTTG+TGG | - | Chr2:65372486-65372505 | MsG0280010152.01.T01:intron | 20.0% |
!!! | CAATCAAAATAATGGATTAA+TGG | + | Chr2:65371234-65371253 | None:intergenic | 20.0% |
!!! | CATTAATCCATTATTTTGAT+TGG | - | Chr2:65371232-65371251 | MsG0280010152.01.T01:intron | 20.0% |
!!! | GAAAAAACATATCAAGTTTT+GGG | - | Chr2:65370687-65370706 | MsG0280010152.01.T01:intron | 20.0% |
!!! | GATTGATACTCTTTTTATAT+AGG | + | Chr2:65371355-65371374 | None:intergenic | 20.0% |
!!! | TGAAAAAACATATCAAGTTT+TGG | - | Chr2:65370686-65370705 | MsG0280010152.01.T01:intron | 20.0% |
!!! | TTATTCTTTTGATTGTTCTT+AGG | + | Chr2:65370793-65370812 | None:intergenic | 20.0% |
! | AAAAGAAGTTGTTTGTGTTA+TGG | + | Chr2:65371586-65371605 | None:intergenic | 25.0% |
! | AAAGATTAAGTTCATTTACC+TGG | + | Chr2:65371812-65371831 | None:intergenic | 25.0% |
! | AAGAAAAAAAAAACATGGTC+GGG | + | Chr2:65370950-65370969 | None:intergenic | 25.0% |
! | AAGTGTAAAGTAATTTACCA+AGG | + | Chr2:65372449-65372468 | None:intergenic | 25.0% |
! | AATATCCTTAAAACACTTGT+AGG | + | Chr2:65371147-65371166 | None:intergenic | 25.0% |
! | ACTATATTTATTCTAATGGG+TGG | + | Chr2:65371114-65371133 | None:intergenic | 25.0% |
! | ATGCACCTATGATTTATTTA+TGG | - | Chr2:65372247-65372266 | MsG0280010152.01.T01:intron | 25.0% |
! | CAAGAGCTATTATTATCATT+TGG | + | Chr2:65369084-65369103 | None:intergenic | 25.0% |
! | CATAGCATTAGAAATAGAAA+AGG | - | Chr2:65369980-65369999 | MsG0280010152.01.T01:intron | 25.0% |
! | CATGTCCATAAATAAATCAT+AGG | + | Chr2:65372255-65372274 | None:intergenic | 25.0% |
! | CTATGATTTATTTATGGACA+TGG | - | Chr2:65372253-65372272 | MsG0280010152.01.T01:intron | 25.0% |
! | CTTAGATCTTTATAAAAGCA+AGG | + | Chr2:65369654-65369673 | None:intergenic | 25.0% |
! | TAAACAGAAGATATAGTGTT+AGG | + | Chr2:65372193-65372212 | None:intergenic | 25.0% |
! | TAACTTAAGAGCTTACAAAT+CGG | + | Chr2:65373157-65373176 | None:intergenic | 25.0% |
! | TATATTCAAGAATATCGCTT+AGG | + | Chr2:65370234-65370253 | None:intergenic | 25.0% |
! | TCCTAAATCAGAAAACAATA+AGG | - | Chr2:65370419-65370438 | MsG0280010152.01.T01:intron | 25.0% |
! | TCTATATTTGAACATAGCAT+AGG | + | Chr2:65370067-65370086 | None:intergenic | 25.0% |
! | TCTCATGAATACTAAATACA+AGG | - | Chr2:65371294-65371313 | MsG0280010152.01.T01:intron | 25.0% |
! | TTAGAAAAAGTTGAAACACA+TGG | - | Chr2:65369056-65369075 | MsG0280010152.01.T01:three_prime_UTR | 25.0% |
! | TTGGTTCATATATTTCATTC+TGG | - | Chr2:65373178-65373197 | MsG0280010152.01.T01:CDS | 25.0% |
!! | ATAACACAAACAACTTCTTT+TGG | - | Chr2:65371585-65371604 | MsG0280010152.01.T01:intron | 25.0% |
!! | GAAATCAAATGGAAAAGTAT+TGG | + | Chr2:65371628-65371647 | None:intergenic | 25.0% |
!! | TCCTTATTGTTTTCTGATTT+AGG | + | Chr2:65370423-65370442 | None:intergenic | 25.0% |
!! | TGATTTTTATAGTACCTTAG+AGG | + | Chr2:65369631-65369650 | None:intergenic | 25.0% |
!! | TTGGTTTCTTGATAATCTAA+AGG | - | Chr2:65372645-65372664 | MsG0280010152.01.T01:intron | 25.0% |
!! | TTTTATATAGGAAAGGAACT+AGG | + | Chr2:65371343-65371362 | None:intergenic | 25.0% |
!! | TTTTTGCAAAGATGAAAAAG+TGG | - | Chr2:65369113-65369132 | MsG0280010152.01.T01:three_prime_UTR | 25.0% |
!!! | TATTAATTGGTGTTACTTCT+TGG | + | Chr2:65369915-65369934 | None:intergenic | 25.0% |
AAAATTGGTGCATCAAACAT+CGG | - | Chr2:65369380-65369399 | MsG0280010152.01.T01:CDS | 30.0% | |
AAACCTTTCAGTGTTTGATT+TGG | + | Chr2:65372065-65372084 | None:intergenic | 30.0% | |
AACTTAAGAGCTTACAAATC+GGG | + | Chr2:65373156-65373175 | None:intergenic | 30.0% | |
AAGTTTCTCATACACATTTG+AGG | - | Chr2:65373228-65373247 | MsG0280010152.01.T01:CDS | 30.0% | |
ACCTGCAGATTAAAAAAAGA+TGG | - | Chr2:65370979-65370998 | MsG0280010152.01.T01:intron | 30.0% | |
AGGATGAACAAAATCACTAT+TGG | + | Chr2:65369286-65369305 | None:intergenic | 30.0% | |
AGTTGAAAGCTTAAACAAAG+AGG | - | Chr2:65370372-65370391 | MsG0280010152.01.T01:intron | 30.0% | |
AGTTTCTCATACACATTTGA+GGG | - | Chr2:65373229-65373248 | MsG0280010152.01.T01:CDS | 30.0% | |
ATAGAAGTGATAGCAATAGA+AGG | - | Chr2:65369463-65369482 | MsG0280010152.01.T01:CDS | 30.0% | |
ATGCAACAATAATACGTGAA+AGG | + | Chr2:65370200-65370219 | None:intergenic | 30.0% | |
ATTCCAAATCAAACACTGAA+AGG | - | Chr2:65372059-65372078 | MsG0280010152.01.T01:intron | 30.0% | |
CAAAAAAAAGAGAAGAATGC+AGG | - | Chr2:65370116-65370135 | MsG0280010152.01.T01:intron | 30.0% | |
CGAAGAATTGCAATTTAATG+TGG | - | Chr2:65369757-65369776 | MsG0280010152.01.T01:intron | 30.0% | |
CGCATCTATTATCTATAGTT+AGG | + | Chr2:65370848-65370867 | None:intergenic | 30.0% | |
GAAAAATAGAGATGAAAGTG+AGG | - | Chr2:65370558-65370577 | MsG0280010152.01.T01:CDS | 30.0% | |
GAATTGTAACTGAATCTGAA+TGG | + | Chr2:65371392-65371411 | None:intergenic | 30.0% | |
GTTGAAAGCTTAAACAAAGA+GGG | - | Chr2:65370373-65370392 | MsG0280010152.01.T01:intron | 30.0% | |
TATGATTGATATTATGTGCC+TGG | - | Chr2:65369887-65369906 | MsG0280010152.01.T01:intron | 30.0% | |
TCTGTTAAAACTGGATAGAA+AGG | + | Chr2:65372297-65372316 | None:intergenic | 30.0% | |
TCTTCATCATCAAGAAAATG+AGG | - | Chr2:65371457-65371476 | MsG0280010152.01.T01:intron | 30.0% | |
TCTTCTTCTTTCACTCTAAT+TGG | + | Chr2:65369339-65369358 | None:intergenic | 30.0% | |
TGAACAAAATCACTATTGGA+TGG | + | Chr2:65369282-65369301 | None:intergenic | 30.0% | |
TGATCTTCTTGCTTTCATAA+TGG | - | Chr2:65371927-65371946 | MsG0280010152.01.T01:CDS | 30.0% | |
TGTAAAGTAATTTACCAAGG+AGG | + | Chr2:65372446-65372465 | None:intergenic | 30.0% | |
TGTGTATGAGAAACTTACAT+AGG | + | Chr2:65373224-65373243 | None:intergenic | 30.0% | |
TGTTTAGGAAGATATTGAGT+TGG | + | Chr2:65371418-65371437 | None:intergenic | 30.0% | |
TTAGGAACAAACCAAAAGAA+CGG | + | Chr2:65372175-65372194 | None:intergenic | 30.0% | |
TTCAATCAAAGAATCTGAGA+TGG | - | Chr2:65371645-65371664 | MsG0280010152.01.T01:CDS | 30.0% | |
TTGAGTATGAAGAAGTTCAA+GGG | - | Chr2:65370458-65370477 | MsG0280010152.01.T01:intron | 30.0% | |
TTGTAAGCTCTTAAGTTAGT+TGG | - | Chr2:65373159-65373178 | MsG0280010152.01.T01:CDS | 30.0% | |
! | CAAGAAACTGATTCAAGAAT+TGG | - | Chr2:65369546-65369565 | MsG0280010152.01.T01:CDS | 30.0% |
! | GTTTCTTGATAATCTAAAGG+AGG | - | Chr2:65372648-65372667 | MsG0280010152.01.T01:intron | 30.0% |
! | TTATGCCTACAAGTGTTTTA+AGG | - | Chr2:65371139-65371158 | MsG0280010152.01.T01:intron | 30.0% |
!! | GTAACATTTGTCACTTTACA+TGG | + | Chr2:65373264-65373283 | None:intergenic | 30.0% |
!! | TGACAAAGTTGACTTGATTA+AGG | - | Chr2:65372085-65372104 | MsG0280010152.01.T01:intron | 30.0% |
!!! | ACCATCTTTTTTTAATCTGC+AGG | + | Chr2:65370983-65371002 | None:intergenic | 30.0% |
!!! | ATCTTTTTTTAATCTGCAGG+TGG | + | Chr2:65370980-65370999 | None:intergenic | 30.0% |
!!! | CTTAAACAAAGAGGGTATTT+TGG | - | Chr2:65370381-65370400 | MsG0280010152.01.T01:intron | 30.0% |
AAAAAAAAAACATGGTCGGG+AGG | + | Chr2:65370947-65370966 | None:intergenic | 35.0% | |
AAAAAAAAACATGGTCGGGA+GGG | + | Chr2:65370946-65370965 | None:intergenic | 35.0% | |
AAAGTAGATATCCGTAACAG+CGG | + | Chr2:65371733-65371752 | None:intergenic | 35.0% | |
AGAGAAGAATGCAGGAATAT+AGG | - | Chr2:65370124-65370143 | MsG0280010152.01.T01:intron | 35.0% | |
AGCTTAGCTAACATAATTCC+TGG | - | Chr2:65370526-65370545 | MsG0280010152.01.T01:intron | 35.0% | |
ATATAGGAAAGGAACTAGGT+AGG | + | Chr2:65371339-65371358 | None:intergenic | 35.0% | |
ATCTGACTAAGAAAATCGAG+AGG | + | Chr2:65372759-65372778 | None:intergenic | 35.0% | |
ATGAATGCAACTATGATCCA+TGG | + | Chr2:65371501-65371520 | None:intergenic | 35.0% | |
ATTTAATGTGGCATGTAGTC+TGG | - | Chr2:65369769-65369788 | MsG0280010152.01.T01:intron | 35.0% | |
CATCATTGTGCAAAGATGAA+AGG | - | Chr2:65369432-65369451 | MsG0280010152.01.T01:CDS | 35.0% | |
CGAACAATATCTTCAGCTTT+CGG | + | Chr2:65371708-65371727 | None:intergenic | 35.0% | |
CTGGAATGATGAACATTCAT+TGG | + | Chr2:65372858-65372877 | None:intergenic | 35.0% | |
CTTCATACTCAAGATCACTT+AGG | + | Chr2:65370450-65370469 | None:intergenic | 35.0% | |
CTTGAGTATGAAGAAGTTCA+AGG | - | Chr2:65370457-65370476 | MsG0280010152.01.T01:intron | 35.0% | |
GAACAATATCTTCAGCTTTC+GGG | + | Chr2:65371707-65371726 | None:intergenic | 35.0% | |
GAATCATTCTTACTGTTGTC+AGG | + | Chr2:65372795-65372814 | None:intergenic | 35.0% | |
GAATGACACCTTAACATCTT+TGG | + | Chr2:65369195-65369214 | None:intergenic | 35.0% | |
GACTCGACCAATCAAAATAA+TGG | + | Chr2:65371242-65371261 | None:intergenic | 35.0% | |
GATTTCCAGTCAAAACATCA+AGG | + | Chr2:65373109-65373128 | None:intergenic | 35.0% | |
GGAATTATGTTAGCTAAGCT+TGG | + | Chr2:65370526-65370545 | None:intergenic | 35.0% | |
GGACACAACATTGGAAAAAT+CGG | - | Chr2:65372669-65372688 | MsG0280010152.01.T01:intron | 35.0% | |
TCAATTACGATACGACATCA+GGG | + | Chr2:65372573-65372592 | None:intergenic | 35.0% | |
TCTTCTTTCACTCTAATTGG+TGG | + | Chr2:65369336-65369355 | None:intergenic | 35.0% | |
TGAATGCAACTATGATCCAT+GGG | + | Chr2:65371500-65371519 | None:intergenic | 35.0% | |
TTAGTCATCCACAAAGTTGA+TGG | + | Chr2:65370877-65370896 | None:intergenic | 35.0% | |
TTTACGACTTTCAAGGAACA+GGG | - | Chr2:65372715-65372734 | MsG0280010152.01.T01:CDS | 35.0% | |
! | AATCAGCTCAGAACTTTTGA+AGG | - | Chr2:65369239-65369258 | MsG0280010152.01.T01:CDS | 35.0% |
! | AGAAAATCGAGAGGTATACT+CGG | + | Chr2:65372750-65372769 | None:intergenic | 35.0% |
! | GACATCTTATTTCCCCAATT+TGG | + | Chr2:65370655-65370674 | None:intergenic | 35.0% |
! | GAGAAAGAGAAGACTTGTTT+AGG | + | Chr2:65371433-65371452 | None:intergenic | 35.0% |
! | TACACATTTGAGGGTAGTTT+TGG | - | Chr2:65373238-65373257 | MsG0280010152.01.T01:CDS | 35.0% |
! | TGAATCTACTTGAAGAGTGT+TGG | - | Chr2:65369142-65369161 | MsG0280010152.01.T01:three_prime_UTR | 35.0% |
! | TTATTTCCCCAATTTGGAAC+AGG | + | Chr2:65370649-65370668 | None:intergenic | 35.0% |
! | TTTTTAATCTGCAGGTGGAT+TGG | + | Chr2:65370975-65370994 | None:intergenic | 35.0% |
!! | AGCTGATTAGTCTTGTTGAA+GGG | + | Chr2:65369227-65369246 | None:intergenic | 35.0% |
!! | ATTAGTCTTGTTGAAGGGTA+AGG | + | Chr2:65369222-65369241 | None:intergenic | 35.0% |
!! | CAAAGTTGACTTGATTAAGG+AGG | - | Chr2:65372088-65372107 | MsG0280010152.01.T01:intron | 35.0% |
!! | CTATTTTTCTCTTGCAAACC+AGG | + | Chr2:65370547-65370566 | None:intergenic | 35.0% |
!! | TACTATCAGAGTTTGTTGAG+AGG | - | Chr2:65372951-65372970 | MsG0280010152.01.T01:CDS | 35.0% |
!! | TAGGAAGATATTGAGTTGGT+TGG | + | Chr2:65371414-65371433 | None:intergenic | 35.0% |
!! | TATTTTGGAGATGAGGAGAA+AGG | - | Chr2:65370396-65370415 | MsG0280010152.01.T01:intron | 35.0% |
!! | TGAATCCTCTAAGATTGAAG+AGG | + | Chr2:65372404-65372423 | None:intergenic | 35.0% |
!! | TTTGCTGTTCTAACTACTTG+TGG | - | Chr2:65371956-65371975 | MsG0280010152.01.T01:CDS | 35.0% |
!!! | GATGTTTTGACTGGAAATCA+AGG | - | Chr2:65373110-65373129 | MsG0280010152.01.T01:CDS | 35.0% |
!!! | GTTATGGTGTTTTCTAGTTC+TGG | + | Chr2:65371570-65371589 | None:intergenic | 35.0% |
!!! | TCAACTTCGATGTTTTTAGC+CGG | + | Chr2:65370358-65370377 | None:intergenic | 35.0% |
!!! | TCTAACCTTGATGTTTTGAC+TGG | - | Chr2:65373101-65373120 | MsG0280010152.01.T01:CDS | 35.0% |
AAAAAAAACATGGTCGGGAG+GGG | + | Chr2:65370945-65370964 | None:intergenic | 40.0% | |
AACCATGCCTCTGATAAGTA+AGG | + | Chr2:65370604-65370623 | None:intergenic | 40.0% | |
AACTCCTCCTGTTCCAAATT+GGG | - | Chr2:65370639-65370658 | MsG0280010152.01.T01:intron | 40.0% | |
AAGAAGAGACGAAGAAGAGA+AGG | + | Chr2:65371774-65371793 | None:intergenic | 40.0% | |
AAGAATGATTCCAGCAGCAA+TGG | - | Chr2:65372804-65372823 | MsG0280010152.01.T01:CDS | 40.0% | |
AAGAGGACCTTACTTATCAG+AGG | - | Chr2:65370594-65370613 | MsG0280010152.01.T01:CDS | 40.0% | |
AGCATAAGCAGAAACCAATC+TGG | + | Chr2:65373027-65373046 | None:intergenic | 40.0% | |
AGTACCTTAGAGGTTAACCT+TGG | + | Chr2:65369621-65369640 | None:intergenic | 40.0% | |
AGTCCATAAGTGAAGGATTG+CGG | - | Chr2:65371258-65371277 | MsG0280010152.01.T01:intron | 40.0% | |
AGTTCAAGGGTTCAAGGATT+TGG | - | Chr2:65370471-65370490 | MsG0280010152.01.T01:intron | 40.0% | |
ATAATGACAACTTGCCTCCA+AGG | - | Chr2:65369601-65369620 | MsG0280010152.01.T01:CDS | 40.0% | |
ATCATTCCAGTAGCGACAAA+GGG | - | Chr2:65372868-65372887 | MsG0280010152.01.T01:CDS | 40.0% | |
ATCTTAGAGGATTCAACGCA+CGG | - | Chr2:65372409-65372428 | MsG0280010152.01.T01:intron | 40.0% | |
CAAAAGAACGGAATCTCTTG+CGG | + | Chr2:65372163-65372182 | None:intergenic | 40.0% | |
CAAAGGCTTTACGACTTTCA+AGG | - | Chr2:65372708-65372727 | MsG0280010152.01.T01:intron | 40.0% | |
CTCAATTACGATACGACATC+AGG | + | Chr2:65372574-65372593 | None:intergenic | 40.0% | |
CTTTACGACTTTCAAGGAAC+AGG | - | Chr2:65372714-65372733 | MsG0280010152.01.T01:CDS | 40.0% | |
CTTTCATGATTGCTTCATCC+AGG | - | Chr2:65371791-65371810 | MsG0280010152.01.T01:CDS | 40.0% | |
GAGGACAATGGTGATAGAAA+CGG | - | Chr2:65372017-65372036 | MsG0280010152.01.T01:intron | 40.0% | |
GATTCTTCATCTTCAACCCA+TGG | - | Chr2:65371481-65371500 | MsG0280010152.01.T01:intron | 40.0% | |
GGAGGCAAGTTGTCATTATT+GGG | + | Chr2:65369600-65369619 | None:intergenic | 40.0% | |
GTTCAAGGGTTCAAGGATTT+GGG | - | Chr2:65370472-65370491 | MsG0280010152.01.T01:intron | 40.0% | |
GTTGCGATTTCATTCAGCAA+AGG | - | Chr2:65372691-65372710 | MsG0280010152.01.T01:intron | 40.0% | |
TATTGTTCGTTCCGCTGTTA+CGG | - | Chr2:65371719-65371738 | MsG0280010152.01.T01:CDS | 40.0% | |
TCTAAAGGAGGACACAACAT+TGG | - | Chr2:65372660-65372679 | MsG0280010152.01.T01:intron | 40.0% | |
TCTCCATCGAAAAACCTAGT+TGG | - | Chr2:65370897-65370916 | MsG0280010152.01.T01:intron | 40.0% | |
TCTCGTCTGTCTGTTAAAAC+TGG | + | Chr2:65372306-65372325 | None:intergenic | 40.0% | |
TCTGCTTATGCTTCAGATGA+CGG | - | Chr2:65373035-65373054 | MsG0280010152.01.T01:CDS | 40.0% | |
TGAAGAAGTTCAAGGGTTCA+AGG | - | Chr2:65370465-65370484 | MsG0280010152.01.T01:intron | 40.0% | |
TGGAGGCAAGTTGTCATTAT+TGG | + | Chr2:65369601-65369620 | None:intergenic | 40.0% | |
TTTGACTGGAAATCAAGGTC+AGG | - | Chr2:65373115-65373134 | MsG0280010152.01.T01:CDS | 40.0% | |
! | ACTCTAATTGGTGGCATAGA+TGG | + | Chr2:65369327-65369346 | None:intergenic | 40.0% |
! | ATGTGATGCTTCCTTGCTAT+TGG | - | Chr2:65371995-65372014 | MsG0280010152.01.T01:intron | 40.0% |
! | CGAAGTATCCATCAACTTTG+TGG | - | Chr2:65370866-65370885 | MsG0280010152.01.T01:intron | 40.0% |
! | TTACTTATCAGAGGCATGGT+TGG | - | Chr2:65370603-65370622 | MsG0280010152.01.T01:CDS | 40.0% |
! | TTTTCCTCTCTCCCTATTGT+TGG | + | Chr2:65369522-65369541 | None:intergenic | 40.0% |
!! | ACTTGTGGTGTTACGAAATC+AGG | - | Chr2:65371971-65371990 | MsG0280010152.01.T01:CDS | 40.0% |
!! | AGAGTTTGTTGAGAGGAAGA+GGG | - | Chr2:65372958-65372977 | MsG0280010152.01.T01:CDS | 40.0% |
!! | AGTTGACTTGATTAAGGAGG+AGG | - | Chr2:65372091-65372110 | MsG0280010152.01.T01:intron | 40.0% |
!! | CTTGTGGTGTTACGAAATCA+GGG | - | Chr2:65371972-65371991 | MsG0280010152.01.T01:CDS | 40.0% |
!! | CTTTTGGATGGATTTCGCAA+GGG | - | Chr2:65373064-65373083 | MsG0280010152.01.T01:CDS | 40.0% |
!! | GAGCTGATTAGTCTTGTTGA+AGG | + | Chr2:65369228-65369247 | None:intergenic | 40.0% |
!! | TAGCCTGTAATCGTTTTTCC+AGG | - | Chr2:65372326-65372345 | MsG0280010152.01.T01:intron | 40.0% |
!! | TTTTTAGCCGGTCTACTTCT+TGG | + | Chr2:65370346-65370365 | None:intergenic | 40.0% |
!!! | AAGAGGGTATTTTGGAGATG+AGG | - | Chr2:65370389-65370408 | MsG0280010152.01.T01:intron | 40.0% |
AAACGGTTCCTATGAGAAGC+AGG | - | Chr2:65372034-65372053 | MsG0280010152.01.T01:intron | 45.0% | |
AACCCGCAATCCTTCACTTA+TGG | + | Chr2:65371264-65371283 | None:intergenic | 45.0% | |
AACTGCAATGTGACCGTGAT+TGG | + | Chr2:65369802-65369821 | None:intergenic | 45.0% | |
ACCATTGTCCTCCAATAGCA+AGG | + | Chr2:65372009-65372028 | None:intergenic | 45.0% | |
ACCTTAGAGGTTAACCTTGG+AGG | + | Chr2:65369618-65369637 | None:intergenic | 45.0% | |
ACTCCTCCTGTTCCAAATTG+GGG | - | Chr2:65370640-65370659 | MsG0280010152.01.T01:intron | 45.0% | |
AGGCAACTGATCAGATTCCA+AGG | - | Chr2:65372349-65372368 | MsG0280010152.01.T01:intron | 45.0% | |
ATCGGATTCTGCTATGCACA+GGG | - | Chr2:65369398-65369417 | MsG0280010152.01.T01:CDS | 45.0% | |
ATGTGGCATGTAGTCTGGTA+CGG | - | Chr2:65369774-65369793 | MsG0280010152.01.T01:intron | 45.0% | |
CAACTCCTCCTGTTCCAAAT+TGG | - | Chr2:65370638-65370657 | MsG0280010152.01.T01:intron | 45.0% | |
CAGCATTCCAAGAAGTAGAC+CGG | - | Chr2:65370336-65370355 | MsG0280010152.01.T01:intron | 45.0% | |
CATCATTCCAGTAGCGACAA+AGG | - | Chr2:65372867-65372886 | MsG0280010152.01.T01:CDS | 45.0% | |
CCTATTGTTGGAGGCAAAGA+CGG | + | Chr2:65369510-65369529 | None:intergenic | 45.0% | |
CCTCCTGGAAAAACGATTAC+AGG | + | Chr2:65372332-65372351 | None:intergenic | 45.0% | |
CCTTGCGAAATCCATCCAAA+AGG | + | Chr2:65373066-65373085 | None:intergenic | 45.0% | |
CGTCTTTGCCTCCAACAATA+GGG | - | Chr2:65369508-65369527 | MsG0280010152.01.T01:CDS | 45.0% | |
CTCTCTCTCAGAAACCTAAG+AGG | - | Chr2:65371540-65371559 | MsG0280010152.01.T01:intron | 45.0% | |
CTGCACCTCTTCAATCTTAG+AGG | - | Chr2:65372396-65372415 | MsG0280010152.01.T01:intron | 45.0% | |
GACCTTACTTATCAGAGGCA+TGG | - | Chr2:65370599-65370618 | MsG0280010152.01.T01:CDS | 45.0% | |
GAGGAAGATAAAGCAGCAAG+AGG | - | Chr2:65370577-65370596 | MsG0280010152.01.T01:CDS | 45.0% | |
GATGTTTGACCCACTAAAGG+TGG | + | Chr2:65370923-65370942 | None:intergenic | 45.0% | |
GGAAAGGAACTAGGTAGGAA+TGG | + | Chr2:65371334-65371353 | None:intergenic | 45.0% | |
GGCAAGTTGTCATTATTGGG+AGG | + | Chr2:65369597-65369616 | None:intergenic | 45.0% | |
GTCCATAAGTGAAGGATTGC+GGG | - | Chr2:65371259-65371278 | MsG0280010152.01.T01:intron | 45.0% | |
GTGTCAAAAGATGCTCCAGA+TGG | + | Chr2:65372927-65372946 | None:intergenic | 45.0% | |
TCAAGAGAAGACTGCCAGAT+TGG | - | Chr2:65373010-65373029 | MsG0280010152.01.T01:CDS | 45.0% | |
TCTTAGAGGATTCAACGCAC+GGG | - | Chr2:65372410-65372429 | MsG0280010152.01.T01:intron | 45.0% | |
TGAAATCCCTTTGTCGCTAC+TGG | + | Chr2:65372877-65372896 | None:intergenic | 45.0% | |
TGACTTGATTAAGGAGGAGG+TGG | - | Chr2:65372094-65372113 | MsG0280010152.01.T01:intron | 45.0% | |
TGGAATAGCCTGCTTCTCAT+AGG | + | Chr2:65372045-65372064 | None:intergenic | 45.0% | |
TGTCTTTGTGACCACAGTTG+AGG | + | Chr2:65372543-65372562 | None:intergenic | 45.0% | |
TTGGTCGAGTCCATAAGTGA+AGG | - | Chr2:65371251-65371270 | MsG0280010152.01.T01:intron | 45.0% | |
! | AGGTAGGAATGGACTCACTA+GGG | + | Chr2:65371323-65371342 | None:intergenic | 45.0% |
! | CGCAAGAGATTCCGTTCTTT+TGG | - | Chr2:65372161-65372180 | MsG0280010152.01.T01:intron | 45.0% |
! | GTTTCTGAGAGAGAGACGAA+CGG | + | Chr2:65371535-65371554 | None:intergenic | 45.0% |
! | GTTTGCTGATCAACAGCTGA+TGG | - | Chr2:65372986-65373005 | MsG0280010152.01.T01:CDS | 45.0% |
! | TAGGTAGGAATGGACTCACT+AGG | + | Chr2:65371324-65371343 | None:intergenic | 45.0% |
! | TTTCCCCAATTTGGAACAGG+AGG | + | Chr2:65370646-65370665 | None:intergenic | 45.0% |
! | TTTCTGAGAGAGAGACGAAC+GGG | + | Chr2:65371534-65371553 | None:intergenic | 45.0% |
!! | CAGAGTTTGTTGAGAGGAAG+AGG | - | Chr2:65372957-65372976 | MsG0280010152.01.T01:CDS | 45.0% |
!! | CCTGTAATCGTTTTTCCAGG+AGG | - | Chr2:65372329-65372348 | MsG0280010152.01.T01:intron | 45.0% |
!! | CCTTTTGGATGGATTTCGCA+AGG | - | Chr2:65373063-65373082 | MsG0280010152.01.T01:CDS | 45.0% |
!! | CTAGTTCTGGTTCTCCTCTT+AGG | + | Chr2:65371557-65371576 | None:intergenic | 45.0% |
!! | TCATTATTGGGAGGTGTCGA+TGG | + | Chr2:65369588-65369607 | None:intergenic | 45.0% |
!! | TCCTTGCTATTGGAGGACAA+TGG | - | Chr2:65372005-65372024 | MsG0280010152.01.T01:intron | 45.0% |
!! | TGACGGATCAACCTTTTGGA+TGG | - | Chr2:65373052-65373071 | MsG0280010152.01.T01:CDS | 45.0% |
!! | TGATGCTTCCTTGCTATTGG+AGG | - | Chr2:65371998-65372017 | MsG0280010152.01.T01:intron | 45.0% |
!! | TGGCCAACTAGGTTTTTCGA+TGG | + | Chr2:65370903-65370922 | None:intergenic | 45.0% |
!!! | AGGTGTCGATGGTTGTTTTC+GGG | + | Chr2:65369577-65369596 | None:intergenic | 45.0% |
!!! | CAGATGACGGATCAACCTTT+TGG | - | Chr2:65373048-65373067 | MsG0280010152.01.T01:CDS | 45.0% |
!!! | GAGGTGTCGATGGTTGTTTT+CGG | + | Chr2:65369578-65369597 | None:intergenic | 45.0% |
ACCTAGTTGGCCACCTTTAG+TGG | - | Chr2:65370910-65370929 | MsG0280010152.01.T01:intron | 50.0% | |
CACGGTCACATTGCAGTTAC+AGG | - | Chr2:65369804-65369823 | MsG0280010152.01.T01:intron | 50.0% | |
CATCGGATTCTGCTATGCAC+AGG | - | Chr2:65369397-65369416 | MsG0280010152.01.T01:CDS | 50.0% | |
CCGTCTTTGCCTCCAACAAT+AGG | - | Chr2:65369507-65369526 | MsG0280010152.01.T01:CDS | 50.0% | |
CCTAGTTGGCCACCTTTAGT+GGG | - | Chr2:65370911-65370930 | MsG0280010152.01.T01:intron | 50.0% | |
GAATCTGATCAGTTGCCTCC+TGG | + | Chr2:65372347-65372366 | None:intergenic | 50.0% | |
GCCTCCAAGGTTAACCTCTA+AGG | - | Chr2:65369614-65369633 | MsG0280010152.01.T01:CDS | 50.0% | |
GGGGATGTTTGACCCACTAA+AGG | + | Chr2:65370926-65370945 | None:intergenic | 50.0% | |
GTAATGCTATCGTCAGGCCT+TGG | + | Chr2:65372369-65372388 | None:intergenic | 50.0% | |
GTCTGGTACGGTTCCAATCA+CGG | - | Chr2:65369786-65369805 | MsG0280010152.01.T01:intron | 50.0% | |
GTGCGTGTAATGCTATCGTC+AGG | + | Chr2:65372375-65372394 | None:intergenic | 50.0% | |
TCCTCTCTCCCTATTGTTGG+AGG | + | Chr2:65369519-65369538 | None:intergenic | 50.0% | |
TTATGGACATGGCCATCGCA+GGG | - | Chr2:65372264-65372283 | MsG0280010152.01.T01:intron | 50.0% | |
TTGTCATCTGCAGTGCCATC+TGG | - | Chr2:65372909-65372928 | MsG0280010152.01.T01:CDS | 50.0% | |
TTTATGGACATGGCCATCGC+AGG | - | Chr2:65372263-65372282 | MsG0280010152.01.T01:intron | 50.0% | |
! | GACGAAGAAGAGAAGGTGCA+AGG | + | Chr2:65371767-65371786 | None:intergenic | 50.0% |
! | TCGAGAGGTATACTCGGATC+TGG | + | Chr2:65372744-65372763 | None:intergenic | 50.0% |
!! | TGGTGTTACTTCTTGGTGCC+AGG | + | Chr2:65369908-65369927 | None:intergenic | 50.0% |
ACCACAGTTGAGGCTGCATC+AGG | + | Chr2:65372533-65372552 | None:intergenic | 55.0% | |
AGGAGGAGGTGGAACAAGCA+TGG | - | Chr2:65372105-65372124 | MsG0280010152.01.T01:intron | 55.0% | |
CCCACTAAAGGTGGCCAACT+AGG | + | Chr2:65370914-65370933 | None:intergenic | 55.0% | |
CGGGAAACAGTCAACCTCCT+TGG | - | Chr2:65372429-65372448 | MsG0280010152.01.T01:intron | 55.0% | |
GATTCTGCTATGCACAGGGC+AGG | - | Chr2:65369402-65369421 | MsG0280010152.01.T01:CDS | 55.0% | |
GCCTCCAACAATAGGGAGAG+AGG | - | Chr2:65369515-65369534 | MsG0280010152.01.T01:CDS | 55.0% | |
GGTGCTCTCTGCAGCTTCTT+AGG | + | Chr2:65369306-65369325 | None:intergenic | 55.0% | |
TGAGAGAGAGACGAACGGGA+AGG | + | Chr2:65371530-65371549 | None:intergenic | 55.0% | |
! | CGAAAACGTGCCATTGCTGC+TGG | + | Chr2:65372817-65372836 | None:intergenic | 55.0% |
AAAGGCTCACCACCCTGCGA+TGG | + | Chr2:65372279-65372298 | None:intergenic | 60.0% | |
GCCTGATGCAGCCTCAACTG+TGG | - | Chr2:65372529-65372548 | MsG0280010152.01.T01:intron | 60.0% | |
TGGACATGGCCATCGCAGGG+TGG | - | Chr2:65372267-65372286 | MsG0280010152.01.T01:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 65369043 | 65373301 | 65369043 | ID=MsG0280010152.01;Name=MsG0280010152.01 |
Chr2 | mRNA | 65369043 | 65373301 | 65369043 | ID=MsG0280010152.01.T01;Parent=MsG0280010152.01;Name=MsG0280010152.01.T01;_AED=0.46;_eAED=0.46;_QI=32|0.4|0.33|1|1|1|6|129|592 |
Chr2 | exon | 65369043 | 65369677 | 65369043 | ID=MsG0280010152.01.T01:exon:14168;Parent=MsG0280010152.01.T01 |
Chr2 | exon | 65369894 | 65369996 | 65369894 | ID=MsG0280010152.01.T01:exon:14167;Parent=MsG0280010152.01.T01 |
Chr2 | exon | 65370232 | 65370351 | 65370232 | ID=MsG0280010152.01.T01:exon:14166;Parent=MsG0280010152.01.T01 |
Chr2 | exon | 65370532 | 65370649 | 65370532 | ID=MsG0280010152.01.T01:exon:14165;Parent=MsG0280010152.01.T01 |
Chr2 | exon | 65371643 | 65372013 | 65371643 | ID=MsG0280010152.01.T01:exon:14164;Parent=MsG0280010152.01.T01 |
Chr2 | exon | 65372709 | 65373301 | 65372709 | ID=MsG0280010152.01.T01:exon:14163;Parent=MsG0280010152.01.T01 |
Chr2 | five_prime_UTR | 65373270 | 65373301 | 65373270 | ID=MsG0280010152.01.T01:five_prime_utr;Parent=MsG0280010152.01.T01 |
Chr2 | CDS | 65372709 | 65373269 | 65372709 | ID=MsG0280010152.01.T01:cds;Parent=MsG0280010152.01.T01 |
Chr2 | CDS | 65371643 | 65372013 | 65371643 | ID=MsG0280010152.01.T01:cds;Parent=MsG0280010152.01.T01 |
Chr2 | CDS | 65370532 | 65370649 | 65370532 | ID=MsG0280010152.01.T01:cds;Parent=MsG0280010152.01.T01 |
Chr2 | CDS | 65370232 | 65370351 | 65370232 | ID=MsG0280010152.01.T01:cds;Parent=MsG0280010152.01.T01 |
Chr2 | CDS | 65369894 | 65369996 | 65369894 | ID=MsG0280010152.01.T01:cds;Parent=MsG0280010152.01.T01 |
Chr2 | CDS | 65369172 | 65369677 | 65369172 | ID=MsG0280010152.01.T01:cds;Parent=MsG0280010152.01.T01 |
Chr2 | three_prime_UTR | 65369043 | 65369171 | 65369043 | ID=MsG0280010152.01.T01:three_prime_utr;Parent=MsG0280010152.01.T01 |
Gene Sequence |
Protein sequence |