AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010097.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010097.01.T01 MTR_2g077990 91.830 306 19 2 22 327 109 408 0.0 561
MsG0280010097.01.T01 MTR_2g078610 90.196 306 24 2 22 327 109 408 0.0 547
MsG0280010097.01.T01 MTR_2g078280 91.034 290 20 2 22 311 109 392 0.0 529
MsG0280010097.01.T01 MTR_2g067440 86.928 306 31 3 22 327 93 389 0.0 528
MsG0280010097.01.T01 MTR_2g067450 75.478 314 40 4 15 327 35 312 2.17e-161 453
MsG0280010097.01.T01 MTR_2g078560 92.377 223 17 0 105 327 100 322 8.62e-152 429
MsG0280010097.01.T01 MTR_2g077980 72.260 292 58 4 48 327 6 286 1.57e-137 391
MsG0280010097.01.T01 MTR_0147s0010 41.447 304 145 6 22 324 110 381 1.07e-61 201
MsG0280010097.01.T01 MTR_4g125940 37.942 311 147 9 22 327 6 275 3.19e-55 181
MsG0280010097.01.T01 MTR_4g029200 39.145 304 139 7 22 324 79 337 8.85e-55 182
MsG0280010097.01.T01 MTR_4g125940 37.942 311 147 9 22 327 61 330 1.70e-54 181
MsG0280010097.01.T01 MTR_7g093370 36.275 306 155 7 22 324 102 370 4.79e-54 181
MsG0280010097.01.T01 MTR_2g008710 37.377 305 143 7 23 322 61 322 6.59e-54 179
MsG0280010097.01.T01 MTR_3g094650 35.974 303 150 7 22 323 61 320 2.42e-53 178
MsG0280010097.01.T01 MTR_2g040000 34.921 315 160 7 18 327 58 332 5.08e-53 177
MsG0280010097.01.T01 MTR_1g054205 35.621 306 157 8 22 324 57 325 6.94e-53 177
MsG0280010097.01.T01 MTR_4g114210 36.275 306 150 7 23 324 55 319 8.00e-53 176
MsG0280010097.01.T01 MTR_7g072480 37.049 305 138 9 22 321 57 312 7.00e-52 174
MsG0280010097.01.T01 MTR_2g084110 35.948 306 149 8 22 326 58 317 7.34e-52 174
MsG0280010097.01.T01 MTR_7g072510 35.548 301 148 7 22 321 53 308 1.45e-51 173
MsG0280010097.01.T01 MTR_3g466200 35.484 310 155 8 17 324 53 319 2.68e-51 172
MsG0280010097.01.T01 MTR_4g029190 38.158 304 144 8 22 324 79 339 7.34e-51 172
MsG0280010097.01.T01 MTR_5g017860 36.213 301 153 7 22 321 60 322 1.19e-50 171
MsG0280010097.01.T01 MTR_2g084080 35.738 305 149 8 22 325 58 316 1.19e-50 171
MsG0280010097.01.T01 MTR_2g084090 36.928 306 147 10 22 326 58 318 1.34e-50 171
MsG0280010097.01.T01 MTR_2g099175 34.768 302 160 6 20 321 67 331 2.25e-50 171
MsG0280010097.01.T01 MTR_5g021060 35.082 305 158 8 22 324 63 329 2.64e-50 170
MsG0280010097.01.T01 MTR_2g088770 35.880 301 156 6 22 322 59 322 4.22e-50 169
MsG0280010097.01.T01 MTR_2g028980 35.974 303 153 8 23 322 63 327 1.18e-49 169
MsG0280010097.01.T01 MTR_5g074970 36.184 304 150 9 22 323 63 324 2.20e-49 167
MsG0280010097.01.T01 MTR_8g076820 34.106 302 159 7 22 321 63 326 3.87e-49 167
MsG0280010097.01.T01 MTR_7g107520 34.219 301 155 5 23 322 59 317 4.42e-49 167
MsG0280010097.01.T01 MTR_5g017850 34.551 301 158 7 22 321 60 322 4.48e-49 167
MsG0280010097.01.T01 MTR_1g115900 36.755 302 145 9 22 321 60 317 1.11e-48 166
MsG0280010097.01.T01 MTR_2g029730 35.197 304 156 7 22 322 58 323 1.87e-48 166
MsG0280010097.01.T01 MTR_5g083860 34.551 301 153 7 22 321 64 321 3.40e-48 164
MsG0280010097.01.T01 MTR_7g026990 36.877 301 143 7 22 321 64 318 6.67e-48 164
MsG0280010097.01.T01 MTR_2g437770 34.219 301 151 7 22 321 83 337 7.22e-48 164
MsG0280010097.01.T01 MTR_2g029740 34.539 304 158 7 22 322 62 327 1.19e-47 164
MsG0280010097.01.T01 MTR_2g029815 36.634 303 151 9 22 321 62 326 1.31e-47 164
MsG0280010097.01.T01 MTR_1g101830 35.786 299 151 7 23 321 61 318 1.80e-47 162
MsG0280010097.01.T01 MTR_4g133800 33.444 302 155 7 22 322 74 330 2.08e-47 163
MsG0280010097.01.T01 MTR_2g084010 35.179 307 151 9 22 326 58 318 2.34e-47 162
MsG0280010097.01.T01 MTR_5g022870 35.314 303 153 8 22 324 56 315 3.16e-47 162
MsG0280010097.01.T01 MTR_2g029830 34.983 303 156 9 22 321 61 325 4.02e-47 162
MsG0280010097.01.T01 MTR_2g029820 35.526 304 155 8 22 322 62 327 6.47e-47 162
MsG0280010097.01.T01 MTR_3g072190 35.526 304 150 8 22 324 59 317 9.32e-47 160
MsG0280010097.01.T01 MTR_7g086820 33.962 318 158 11 5 321 42 308 1.01e-46 160
MsG0280010097.01.T01 MTR_3g094670 35.314 303 152 7 22 323 61 320 1.06e-46 160
MsG0280010097.01.T01 MTR_4g046713 34.551 301 160 6 22 322 60 323 1.56e-46 160
MsG0280010097.01.T01 MTR_0155s0040 33.775 302 152 8 23 324 61 314 4.20e-46 159
MsG0280010097.01.T01 MTR_4g029170 35.806 310 151 9 17 323 55 319 5.54e-46 159
MsG0280010097.01.T01 MTR_2g084000 34.314 306 153 9 22 325 59 318 9.76e-46 158
MsG0280010097.01.T01 MTR_3g466180 38.487 304 141 8 22 324 64 322 9.79e-46 158
MsG0280010097.01.T01 MTR_1g090760 34.796 319 164 8 14 324 47 329 1.00e-45 158
MsG0280010097.01.T01 MTR_1g025980 35.000 300 153 8 22 321 57 314 1.19e-45 158
MsG0280010097.01.T01 MTR_7g086870 34.333 300 150 8 22 321 55 307 1.42e-45 157
MsG0280010097.01.T01 MTR_2g029800 33.553 304 161 7 22 322 62 327 1.94e-45 158
MsG0280010097.01.T01 MTR_1g077000 33.003 303 155 7 22 324 72 326 2.34e-45 157
MsG0280010097.01.T01 MTR_2g084020 33.987 306 154 9 22 325 58 317 4.98e-45 156
MsG0280010097.01.T01 MTR_2g029860 33.007 306 164 7 22 324 62 329 5.17e-45 157
MsG0280010097.01.T01 MTR_4g031140 35.048 311 159 8 18 327 57 325 6.46e-45 156
MsG0280010097.01.T01 MTR_5g049280 33.861 316 164 11 18 327 62 338 8.59e-45 156
MsG0280010097.01.T01 MTR_3g092990 34.314 306 162 8 23 327 60 327 1.13e-44 155
MsG0280010097.01.T01 MTR_1g022970 37.908 306 149 6 22 324 79 346 1.83e-44 155
MsG0280010097.01.T01 MTR_4g029180 35.161 310 153 9 17 323 55 319 1.89e-44 155
MsG0280010097.01.T01 MTR_2g029750 34.211 304 159 7 22 322 62 327 2.27e-44 155
MsG0280010097.01.T01 MTR_4g030890 34.426 305 158 7 18 321 129 392 3.54e-44 156
MsG0280010097.01.T01 MTR_4g083710 33.443 305 160 8 22 324 60 323 5.49e-44 154
MsG0280010097.01.T01 MTR_6g027440 35.333 300 151 7 22 321 54 310 5.77e-44 153
MsG0280010097.01.T01 MTR_5g074860 35.831 307 149 9 22 324 62 324 8.68e-44 153
MsG0280010097.01.T01 MTR_2g029910 35.314 303 156 8 22 321 63 328 8.83e-44 154
MsG0280010097.01.T01 MTR_2g029560 33.224 304 162 7 22 322 57 322 1.04e-43 153
MsG0280010097.01.T01 MTR_3g094630 35.974 303 150 7 22 323 61 320 1.49e-43 152
MsG0280010097.01.T01 MTR_7g029030 33.003 303 158 6 24 324 60 319 1.53e-43 152
MsG0280010097.01.T01 MTR_2g008730 36.000 275 133 6 53 322 62 298 2.49e-43 151
MsG0280010097.01.T01 MTR_8g075100 34.495 287 149 6 22 308 59 306 3.00e-43 151
MsG0280010097.01.T01 MTR_2g029850 34.211 304 159 7 22 322 62 327 3.65e-43 152
MsG0280010097.01.T01 MTR_4g087965 33.550 307 166 7 19 322 72 343 6.96e-43 151
MsG0280010097.01.T01 MTR_1g086320 33.775 302 163 7 23 322 64 330 9.73e-43 150
MsG0280010097.01.T01 MTR_1g086490 34.314 306 163 6 23 322 64 337 1.06e-42 150
MsG0280010097.01.T01 MTR_4g122640 34.304 309 161 9 18 324 67 335 3.47e-42 149
MsG0280010097.01.T01 MTR_1g038680 33.000 300 168 4 23 322 63 329 3.70e-42 149
MsG0280010097.01.T01 MTR_5g074740 35.831 307 149 10 22 324 58 320 4.39e-42 149
MsG0280010097.01.T01 MTR_3g072190 33.447 293 151 7 32 324 2 250 1.87e-41 145
MsG0280010097.01.T01 MTR_5g074760 35.179 307 151 10 22 324 58 320 2.25e-41 147
MsG0280010097.01.T01 MTR_2g029830 32.877 292 155 8 34 322 5 258 2.35e-41 145
MsG0280010097.01.T01 MTR_5g033470 31.475 305 167 10 22 321 106 373 4.91e-41 147
MsG0280010097.01.T01 MTR_5g014100 32.895 304 165 7 22 321 59 327 1.55e-40 145
MsG0280010097.01.T01 MTR_1g066710 31.353 303 168 7 19 321 57 319 1.72e-40 144
MsG0280010097.01.T01 MTR_8g062780 34.000 300 159 6 24 321 58 320 3.03e-40 144
MsG0280010097.01.T01 MTR_3g467600 35.179 307 150 11 23 324 61 323 3.71e-40 144
MsG0280010097.01.T01 MTR_5g074710 34.528 307 153 10 22 324 58 320 6.96e-40 143
MsG0280010097.01.T01 MTR_4g074995 32.459 305 150 9 22 324 57 307 9.26e-40 142
MsG0280010097.01.T01 MTR_4g132110 30.592 304 176 5 19 322 62 330 2.16e-39 142
MsG0280010097.01.T01 MTR_2g008160 32.237 304 161 8 23 322 58 320 3.90e-39 140
MsG0280010097.01.T01 MTR_4g074990 31.908 304 150 9 22 324 57 304 5.80e-39 140
MsG0280010097.01.T01 MTR_6g043280 31.894 301 156 8 23 321 75 328 6.46e-39 140
MsG0280010097.01.T01 MTR_1g009750 31.803 305 165 7 24 324 62 327 1.03e-38 140
MsG0280010097.01.T01 MTR_3g092990 32.993 294 158 7 35 327 61 316 1.45e-38 139
MsG0280010097.01.T01 MTR_6g043460 33.555 301 152 7 23 321 70 324 2.12e-38 139
MsG0280010097.01.T01 MTR_5g016010 31.148 305 168 8 22 322 60 326 3.70e-38 138
MsG0280010097.01.T01 MTR_4g132110 30.921 304 170 7 19 322 62 325 4.58e-38 138
MsG0280010097.01.T01 MTR_4g127670 32.039 309 165 7 19 323 54 321 5.66e-38 137
MsG0280010097.01.T01 MTR_4g132490 32.343 303 167 6 22 324 62 326 3.92e-36 133
MsG0280010097.01.T01 MTR_1g066380 28.754 313 178 7 13 321 48 319 7.02e-36 132
MsG0280010097.01.T01 MTR_1g066680 29.373 303 174 6 19 321 56 318 1.89e-35 131
MsG0280010097.01.T01 MTR_1g066640 28.947 304 174 6 19 321 57 319 3.05e-35 130
MsG0280010097.01.T01 MTR_4g074980 30.592 304 142 9 22 324 58 293 7.84e-34 126
MsG0280010097.01.T01 MTR_6g043240 29.739 306 168 7 17 322 70 328 2.20e-33 126
MsG0280010097.01.T01 MTR_4g095450 29.967 307 168 8 22 324 60 323 3.82e-32 122
MsG0280010097.01.T01 MTR_4g074980 41.139 158 85 3 22 178 58 208 7.64e-32 120
MsG0280010097.01.T01 MTR_1g066380 28.621 290 165 6 33 321 3 251 9.32e-32 119
MsG0280010097.01.T01 MTR_3g105790 30.033 303 167 8 23 322 59 319 1.09e-30 118
MsG0280010097.01.T01 MTR_0286s0010 30.421 309 173 9 19 324 64 333 4.94e-30 117
MsG0280010097.01.T01 MTR_6g008075 30.421 309 173 9 19 324 64 333 4.94e-30 117
MsG0280010097.01.T01 MTR_1g009750 28.053 303 162 7 24 324 62 310 5.18e-29 114
MsG0280010097.01.T01 MTR_2g067350 80.303 66 11 1 264 327 12 77 8.18e-28 103
MsG0280010097.01.T01 MTR_2g008160 29.605 304 134 11 23 322 58 285 2.06e-24 100
MsG0280010097.01.T01 MTR_5g074860 44.444 144 72 5 22 163 62 199 2.33e-23 97.8
MsG0280010097.01.T01 MTR_2g008160 40.141 142 75 4 23 164 58 189 4.22e-23 95.5
MsG0280010097.01.T01 MTR_5g074700 30.075 266 131 8 60 324 2 213 7.97e-23 94.7
MsG0280010097.01.T01 MTR_3g072260 61.538 78 27 2 22 98 59 134 8.92e-22 90.1
MsG0280010097.01.T01 MTR_6g048160 56.944 72 26 1 28 99 22 88 1.82e-21 87.4
MsG0280010097.01.T01 MTR_2g067310 81.481 54 10 0 264 317 8 61 3.87e-21 90.9
MsG0280010097.01.T01 MTR_3g105790 27.899 276 160 7 50 322 4 243 7.86e-21 90.1
MsG0280010097.01.T01 MTR_2g029880 27.619 210 109 3 115 322 17 185 2.06e-18 82.8
MsG0280010097.01.T01 MTR_7g072490 46.465 99 45 3 35 132 2 93 8.89e-17 78.2
MsG0280010097.01.T01 MTR_4g114220 50.667 75 26 2 23 97 37 100 1.17e-15 73.2
MsG0280010097.01.T01 MTR_1g089005 42.308 104 51 2 1 100 32 130 2.24e-14 70.1
MsG0280010097.01.T01 MTR_7g086790 36.508 126 70 3 36 161 17 132 2.41e-14 70.9
MsG0280010097.01.T01 MTR_0147s0040 46.053 76 40 1 249 324 8 82 1.72e-13 65.5
MsG0280010097.01.T01 MTR_2g067360 57.576 66 22 4 189 253 33 93 5.32e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010097.01.T01 AT4G33870 43.464 306 160 5 23 323 102 399 3.46e-73 232
MsG0280010097.01.T01 AT4G36430 37.785 307 151 7 22 326 63 331 4.39e-58 191
MsG0280010097.01.T01 AT1G49570 38.944 303 145 8 22 321 81 346 3.59e-57 189
MsG0280010097.01.T01 AT5G64120 39.535 301 137 10 23 322 69 325 2.42e-56 186
MsG0280010097.01.T01 AT5G06720 35.948 306 155 8 22 324 65 332 5.51e-53 177
MsG0280010097.01.T01 AT2G38380 37.013 308 152 9 18 321 60 329 8.41e-53 177
MsG0280010097.01.T01 AT2G38390 36.513 304 151 9 22 321 64 329 1.05e-52 177
MsG0280010097.01.T01 AT5G17820 34.098 305 154 7 20 324 55 312 1.37e-51 173
MsG0280010097.01.T01 AT2G41480 37.864 309 147 8 20 324 60 327 3.81e-51 172
MsG0280010097.01.T01 AT5G15180 35.082 305 156 5 23 326 66 329 6.37e-51 172
MsG0280010097.01.T01 AT5G17820 34.323 303 152 7 22 324 110 365 1.44e-50 172
MsG0280010097.01.T01 AT3G50990 33.981 309 164 9 18 324 70 340 2.82e-50 171
MsG0280010097.01.T01 AT4G08770 36.334 311 154 8 22 327 57 328 4.83e-50 170
MsG0280010097.01.T01 AT2G35380 36.688 308 156 9 18 321 59 331 7.43e-50 169
MsG0280010097.01.T01 AT2G18150 34.091 308 163 7 22 327 69 338 1.58e-49 168
MsG0280010097.01.T01 AT5G05340 34.323 303 155 7 22 323 63 322 2.38e-49 167
MsG0280010097.01.T01 AT5G58390 37.171 304 146 9 22 323 54 314 3.41e-49 167
MsG0280010097.01.T01 AT4G08780 35.048 311 158 8 22 327 57 328 3.52e-49 168
MsG0280010097.01.T01 AT5G19890 35.599 309 150 10 18 321 59 323 1.17e-48 166
MsG0280010097.01.T01 AT1G05240 32.781 302 162 4 23 322 60 322 1.92e-48 165
MsG0280010097.01.T01 AT1G05250 32.781 302 162 4 23 322 60 322 1.92e-48 165
MsG0280010097.01.T01 AT2G43480 33.134 335 174 9 2 324 38 334 7.37e-48 164
MsG0280010097.01.T01 AT5G66390 34.426 305 160 8 22 324 66 332 8.40e-48 164
MsG0280010097.01.T01 AT3G03670 33.555 301 160 6 22 321 56 317 1.57e-47 163
MsG0280010097.01.T01 AT1G68850 34.405 311 160 11 23 327 64 336 1.69e-47 163
MsG0280010097.01.T01 AT5G42180 34.323 303 157 7 22 324 56 316 2.20e-47 162
MsG0280010097.01.T01 AT1G30870 33.882 304 155 6 22 323 84 343 2.47e-47 163
MsG0280010097.01.T01 AT3G01190 33.779 299 157 4 23 321 60 317 4.50e-47 162
MsG0280010097.01.T01 AT1G44970 37.987 308 148 8 18 321 74 342 5.36e-47 162
MsG0280010097.01.T01 AT5G06730 34.106 302 160 6 22 321 66 330 6.68e-47 162
MsG0280010097.01.T01 AT5G51890 34.323 303 158 8 23 325 60 321 9.20e-47 160
MsG0280010097.01.T01 AT2G18140 34.304 309 161 9 22 327 68 337 3.37e-46 160
MsG0280010097.01.T01 AT5G64100 33.224 304 157 7 23 324 71 330 3.97e-46 159
MsG0280010097.01.T01 AT5G24070 32.298 322 176 9 2 321 50 331 6.84e-46 159
MsG0280010097.01.T01 AT1G05260 34.185 313 165 7 13 322 48 322 7.46e-46 159
MsG0280010097.01.T01 AT1G14550 35.197 304 150 10 22 322 59 318 1.40e-45 157
MsG0280010097.01.T01 AT3G21770 34.295 312 166 7 13 322 51 325 1.41e-45 158
MsG0280010097.01.T01 AT5G39580 35.714 308 154 9 18 324 54 318 2.17e-45 157
MsG0280010097.01.T01 AT5G58400 34.868 304 153 8 22 323 63 323 3.46e-45 157
MsG0280010097.01.T01 AT5G19880 33.333 306 164 7 23 324 59 328 3.50e-45 157
MsG0280010097.01.T01 AT4G16270 36.634 303 148 11 22 321 83 344 3.79e-45 157
MsG0280010097.01.T01 AT2G22420 34.098 305 159 7 18 321 52 315 7.65e-45 156
MsG0280010097.01.T01 AT4G33420 34.114 299 149 8 23 321 71 321 1.82e-44 155
MsG0280010097.01.T01 AT3G32980 35.370 311 157 8 22 327 64 335 2.55e-44 155
MsG0280010097.01.T01 AT5G64110 33.775 302 156 6 23 322 68 327 2.62e-44 154
MsG0280010097.01.T01 AT4G11290 32.000 300 169 4 23 322 59 323 2.91e-44 154
MsG0280010097.01.T01 AT4G33420 34.114 299 149 8 23 321 118 368 3.06e-44 155
MsG0280010097.01.T01 AT2G39040 35.505 307 159 10 23 326 80 350 8.28e-44 154
MsG0280010097.01.T01 AT4G25980 34.211 304 156 7 23 322 60 323 1.15e-43 153
MsG0280010097.01.T01 AT3G49120 36.013 311 155 9 22 327 65 336 1.63e-43 153
MsG0280010097.01.T01 AT5G22410 32.903 310 165 8 15 321 52 321 7.55e-43 151
MsG0280010097.01.T01 AT3G49110 35.048 311 158 9 22 327 66 337 8.81e-43 151
MsG0280010097.01.T01 AT4G30170 31.803 305 166 5 22 324 60 324 1.07e-42 150
MsG0280010097.01.T01 AT2G34060 31.373 306 172 7 19 321 72 342 1.01e-39 143
MsG0280010097.01.T01 AT2G35380 34.799 273 141 8 53 321 4 243 1.64e-39 140
MsG0280010097.01.T01 AT1G71695 34.211 304 153 7 22 322 77 336 1.95e-39 142
MsG0280010097.01.T01 AT4G17690 34.333 300 153 9 24 321 61 318 2.93e-39 141
MsG0280010097.01.T01 AT5G14130 32.013 303 164 6 22 322 65 327 5.08e-39 140
MsG0280010097.01.T01 AT2G18980 31.023 303 167 6 24 324 60 322 8.79e-39 140
MsG0280010097.01.T01 AT1G14540 32.899 307 160 8 18 322 50 312 8.86e-39 140
MsG0280010097.01.T01 AT4G26010 32.051 312 159 10 13 321 44 305 8.97e-39 139
MsG0280010097.01.T01 AT5G14130 32.013 303 164 6 22 322 106 368 1.46e-38 140
MsG0280010097.01.T01 AT4G26010 32.051 312 159 10 13 321 72 333 1.98e-38 139
MsG0280010097.01.T01 AT4G21960 30.592 304 171 6 19 322 61 324 2.93e-38 139
MsG0280010097.01.T01 AT4G37530 30.921 304 168 7 22 321 60 325 3.05e-38 139
MsG0280010097.01.T01 AT3G17070 31.833 311 167 8 19 324 68 338 9.29e-38 137
MsG0280010097.01.T01 AT4G37520 30.263 304 170 8 22 321 60 325 3.45e-37 136
MsG0280010097.01.T01 AT5G47000 31.818 308 167 8 19 324 63 329 3.92e-37 136
MsG0280010097.01.T01 AT1G77100 31.250 304 160 9 23 322 58 316 9.36e-37 134
MsG0280010097.01.T01 AT2G37130 30.592 304 170 7 19 321 29 292 1.04e-36 134
MsG0280010097.01.T01 AT2G37130 30.592 304 170 7 19 321 60 323 1.76e-36 134
MsG0280010097.01.T01 AT4G37520 29.605 304 169 8 22 321 60 322 5.43e-36 132
MsG0280010097.01.T01 AT5G40150 33.443 305 159 8 19 321 62 324 5.73e-35 130
MsG0280010097.01.T01 AT2G24800 30.795 302 171 7 23 324 65 328 1.11e-34 129
MsG0280010097.01.T01 AT3G28200 31.148 305 165 9 19 321 51 312 2.65e-34 128
MsG0280010097.01.T01 AT4G31760 31.475 305 164 6 23 324 63 325 7.86e-34 127
MsG0280010097.01.T01 AT1G34510 28.525 305 163 8 20 321 53 305 2.21e-32 122
MsG0280010097.01.T01 AT1G24110 29.836 305 174 8 19 321 52 318 3.52e-32 122
MsG0280010097.01.T01 AT3G17070 30.508 295 160 8 35 324 21 275 6.20e-32 120
MsG0280010097.01.T01 AT4G37530 31.154 260 138 6 22 277 60 282 9.88e-32 120
MsG0280010097.01.T01 AT3G49960 27.961 304 177 7 22 321 60 325 2.38e-30 117
MsG0280010097.01.T01 AT5G67400 27.632 304 178 7 22 321 60 325 6.33e-29 114
MsG0280010097.01.T01 AT4G25980 42.857 140 70 4 23 162 105 234 5.04e-23 97.1
MsG0280010097.01.T01 AT5G39580 41.958 143 72 3 18 160 54 185 1.01e-22 95.1
MsG0280010097.01.T01 AT2G24800 39.130 138 74 2 23 160 65 192 2.23e-21 91.7
MsG0280010097.01.T01 AT3G42570 34.188 117 70 3 45 160 37 147 4.07e-13 66.6

Find 80 sgRNAs with CRISPR-Local

Find 151 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAAGAGATTCCGTTCTTT+TGG 0.230617 2:+64330815 MsG0280010097.01.T01:CDS
AGACTTGTTTAGGAAGTTAT+TGG 0.233772 2:-64330458 None:intergenic
AAACCTTTCAATGTTTGATT+TGG 0.241735 2:-64330711 None:intergenic
TGACAAAGTTGACTTGATTA+AGG 0.286349 2:+64330734 MsG0280010097.01.T01:CDS
CCTTTCTATCCAGGTTTAAC+AGG 0.295198 2:+64330964 MsG0280010097.01.T01:CDS
TACACATTTGAGGGTAGTTT+TGG 0.296684 2:+64331906 MsG0280010097.01.T01:three_prime_UTR
CTGCACCTCTTCAATCTTAG+AGG 0.300466 2:+64331066 MsG0280010097.01.T01:CDS
GAGAAAGAGAAGACTTGTTT+AGG 0.306647 2:-64330468 None:intergenic
ATGTGATGCTTCCTTGCTAT+TGG 0.356236 2:+64330644 MsG0280010097.01.T01:CDS
CTTCGTCTCTTCTTTCATGA+TGG 0.371883 2:+64330493 MsG0280010097.01.T01:CDS
TAGGAAGTTATTGGGTTTGT+TGG 0.382859 2:-64330449 None:intergenic
GACTTGTTTAGGAAGTTATT+GGG 0.382872 2:-64330457 None:intergenic
GGTGCTGCTCCTTTCTATCC+AGG 0.393702 2:+64330955 MsG0280010097.01.T01:CDS
TTGTCATCTGCAGTGCCATC+TGG 0.398557 2:+64331577 MsG0280010097.01.T01:CDS
CTGTACGACTTTCAAGGAAC+AGG 0.416515 2:+64331382 MsG0280010097.01.T01:CDS
ATATTATTCTTACAGTTGTC+AGG 0.418106 2:-64331460 None:intergenic
CAGAGTTTGTTGAGAGGAAG+AGG 0.433418 2:+64331625 MsG0280010097.01.T01:CDS
TCAAGAGAAGACTGCCAGAT+TGG 0.442700 2:+64331678 MsG0280010097.01.T01:CDS
CAAAGGCTGTACGACTTTCA+AGG 0.443147 2:+64331376 MsG0280010097.01.T01:CDS
CGGGAAACAGTCAGCCTCCT+TGG 0.443186 2:+64331099 MsG0280010097.01.T01:CDS
GTAACAGCTGTCACTTTACA+TGG 0.451715 2:-64331929 None:intergenic
ATGTAAAGTGACAGCTGTTA+CGG 0.456532 2:+64331931 MsG0280010097.01.T01:three_prime_UTR
CAGATGACGGATCAACCTTT+CGG 0.458746 2:+64331716 MsG0280010097.01.T01:CDS
TTTATAGACATGGCCATCGC+AGG 0.466072 2:+64330933 MsG0280010097.01.T01:intron
AGAGTTTGTTGAGAGGAAGA+GGG 0.471781 2:+64331626 MsG0280010097.01.T01:CDS
ATTCCAAATCAAACATTGAA+AGG 0.482239 2:+64330708 MsG0280010097.01.T01:CDS
TCTGCTTATGCTTCAGATGA+CGG 0.489775 2:+64331703 MsG0280010097.01.T01:CDS
CACTTAAGAGCTTACGAGAC+GGG 0.495472 2:-64331821 None:intergenic
CTTTCATGATGGCTTCATCC+AGG 0.495631 2:+64330504 MsG0280010097.01.T01:CDS
TCGAGAGGTATACTCGGATC+TGG 0.496610 2:-64331409 None:intergenic
TGATGCTTCCTTGCTATTGG+AGG 0.498318 2:+64330647 MsG0280010097.01.T01:CDS
CCTGTTAAACCTGGATAGAA+AGG 0.501467 2:-64330964 None:intergenic
AGTTTCTCATACACATTTGA+GGG 0.502926 2:+64331897 MsG0280010097.01.T01:three_prime_UTR
TCTCGTCTGCCTGTTAAACC+TGG 0.503375 2:-64330973 None:intergenic
TTTGACTGGAAATCAAGGTC+AGG 0.507215 2:+64331783 MsG0280010097.01.T01:CDS
AAGTTTCTCATACACATTTG+AGG 0.511157 2:+64331896 MsG0280010097.01.T01:three_prime_UTR
ATAATGTTATCGTCAGGCCT+TGG 0.511832 2:-64331036 None:intergenic
ATCTTAGAGGATTCATCGCA+CGG 0.514849 2:+64331079 MsG0280010097.01.T01:CDS
AGCATAAGCAGAAACCAATC+TGG 0.517041 2:-64331692 None:intergenic
TGACTTGATTAAGGAGGAGG+TGG 0.522484 2:+64330743 MsG0280010097.01.T01:CDS
AAACGGTTTCTATGAGAAGC+AGG 0.524335 2:+64330683 MsG0280010097.01.T01:CDS
GAGGACAATGGTGATAGAAA+CGG 0.527851 2:+64330666 MsG0280010097.01.T01:CDS
AGTTGACTTGATTAAGGAGG+AGG 0.538971 2:+64330740 MsG0280010097.01.T01:CDS
GATTTCCAGTCAAAACATCA+AGG 0.539193 2:-64331774 None:intergenic
TCGTAAGCTCTTAAGTGAGT+TGG 0.539981 2:+64331827 MsG0280010097.01.T01:exon
GTGCGCATAATGTTATCGTC+AGG 0.540438 2:-64331042 None:intergenic
TGACGGATCAACCTTTCGGA+TGG 0.559114 2:+64331720 MsG0280010097.01.T01:CDS
ATCACTCTAGTAGTGACAAA+GGG 0.565656 2:+64331536 MsG0280010097.01.T01:CDS
TCAGCACAAGACACAACGCC+GGG 0.567436 2:-64330777 None:intergenic
ATGTGTATGAGAAACTTACA+TGG 0.569215 2:-64331890 None:intergenic
GAGGTGGAACAAGCATGTCC+CGG 0.580012 2:+64330759 MsG0280010097.01.T01:CDS
TATACAGGAGGACACAACAT+TGG 0.581696 2:+64331328 MsG0280010097.01.T01:intron
CCTTTCGGATGGATTTCGCA+AGG 0.582493 2:+64331731 MsG0280010097.01.T01:CDS
CAAAGTTGACTTGATTAAGG+AGG 0.582626 2:+64330737 MsG0280010097.01.T01:CDS
AAGAATAATATCAGCAGCAA+CGG 0.583328 2:+64331472 MsG0280010097.01.T01:CDS
CATCACTCTAGTAGTGACAA+AGG 0.585016 2:+64331535 MsG0280010097.01.T01:CDS
CTTTCGGATGGATTTCGCAA+GGG 0.591202 2:+64331732 MsG0280010097.01.T01:CDS
ACCATTGTCCTCCAATAGCA+AGG 0.592588 2:-64330655 None:intergenic
ACTGGAAATCAAGGTCAGGT+TGG 0.593799 2:+64331787 MsG0280010097.01.T01:CDS
AGGCAACTGATCAGATTCCA+AGG 0.594430 2:+64331019 MsG0280010097.01.T01:CDS
GTTTGCTGATCAACAGCTGA+TGG 0.595102 2:+64331654 MsG0280010097.01.T01:CDS
CAAAAGAACGGAATCTCTTG+CGG 0.599978 2:-64330814 None:intergenic
AAAGGAGCAGCACCCTGCGA+TGG 0.600527 2:-64330946 None:intergenic
TTATAGACATGGCCATCGCA+GGG 0.602550 2:+64330934 MsG0280010097.01.T01:intron
TGAATCCTCTAAGATTGAAG+AGG 0.625004 2:-64331071 None:intergenic
AACACATGCATTCATACCGA+CGG 0.626540 2:+64329753 None:intergenic
GTGTCAAAAGATGCTCCAGA+TGG 0.631259 2:-64331592 None:intergenic
TTAGGAACAAACCAAAAGAA+CGG 0.636922 2:-64330826 None:intergenic
TCTTAGAGGATTCATCGCAC+GGG 0.643691 2:+64331080 MsG0280010097.01.T01:CDS
AGAAAATCGAGAGGTATACT+CGG 0.649947 2:-64331415 None:intergenic
GTCAGCACAAGACACAACGC+CGG 0.652611 2:-64330778 None:intergenic
TCACTTAAGAGCTTACGAGA+CGG 0.653285 2:-64331822 None:intergenic
TACTATCAGAGTTTGTTGAG+AGG 0.661163 2:+64331619 MsG0280010097.01.T01:CDS
GTTGTGATCTCATTCAACAA+AGG 0.665265 2:+64331359 MsG0280010097.01.T01:CDS
CCTTGCGAAATCCATCCGAA+AGG 0.669038 2:-64331731 None:intergenic
TCCTTGCTATTGGAGGACAA+TGG 0.673992 2:+64330654 MsG0280010097.01.T01:CDS
TGTAAAGTAATTTACCAAGG+AGG 0.676238 2:-64331113 None:intergenic
TGTACGACTTTCAAGGAACA+GGG 0.687437 2:+64331383 MsG0280010097.01.T01:CDS
TGTGTATGAGAAACTTACAT+GGG 0.691274 2:-64331889 None:intergenic
ACCTGACTGAGAAAATCGAG+AGG 0.703790 2:-64331424 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACAAAAAGATATAAAT+TGG + Chr2:64329971-64329990 MsG0280010097.01.T01:intron 10.0%
!! TTTATGAATATAATATGATA+AGG + Chr2:64331148-64331167 MsG0280010097.01.T01:intron 10.0%
!!! ATTTTTTAAATTCTTGAATA+AGG + Chr2:64331277-64331296 MsG0280010097.01.T01:intron 10.0%
!!! TATTGATACTATTTTTATAT+AGG - Chr2:64330403-64330422 None:intergenic 10.0%
!! AAAAAAAAAAAAAAAACTCC+TGG + Chr2:64330135-64330154 MsG0280010097.01.T01:intron 15.0%
!! GATATATGTTATAAACTTAT+AGG - Chr2:64330854-64330873 None:intergenic 15.0%
!! TAACTTAAAGTAAGAAAATA+TGG + Chr2:64330038-64330057 MsG0280010097.01.T01:intron 15.0%
!! AAAGATTAAGTTTATTTACC+TGG - Chr2:64330525-64330544 None:intergenic 20.0%
!! CATGTCTATAAATAAATCAT+AGG - Chr2:64330925-64330944 None:intergenic 20.0%
!! CTATGATTTATTTATAGACA+TGG + Chr2:64330923-64330942 MsG0280010097.01.T01:intron 20.0%
!! TCTAACATATGCTTTAATTA+TGG - Chr2:64330308-64330327 None:intergenic 20.0%
!!! AAAGCTTATCTTTTATATAC+TGG + Chr2:64330266-64330285 MsG0280010097.01.T01:intron 20.0%
!!! AAGCTTATCTTTTATATACT+GGG + Chr2:64330267-64330286 MsG0280010097.01.T01:intron 20.0%
!!! ACTTATCTTTAAAAGAAGTT+AGG + Chr2:64330207-64330226 MsG0280010097.01.T01:intron 20.0%
!!! ATATGATAAGGTATTATTTG+TGG + Chr2:64331160-64331179 MsG0280010097.01.T01:intron 20.0%
! AAACCTTTCAATGTTTGATT+TGG - Chr2:64330714-64330733 None:intergenic 25.0%
! AAGTGTAAAGTAATTTACCA+AGG - Chr2:64331119-64331138 None:intergenic 25.0%
! ATATTATTCTTACAGTTGTC+AGG - Chr2:64331463-64331482 None:intergenic 25.0%
! ATCTGAGAATTTCAATGTAT+AGG + Chr2:64329918-64329937 MsG0280010097.01.T01:intron 25.0%
! ATGAGATTAATCTTCTTAAG+GGG - Chr2:64330341-64330360 None:intergenic 25.0%
! ATGCTTTAATTATGGACTTA+TGG - Chr2:64330300-64330319 None:intergenic 25.0%
! ATTCCAAATCAAACATTGAA+AGG + Chr2:64330708-64330727 MsG0280010097.01.T01:CDS 25.0%
! CATGAGATTAATCTTCTTAA+GGG - Chr2:64330342-64330361 None:intergenic 25.0%
! GTTATAAACTTATAGGTGTT+AGG - Chr2:64330847-64330866 None:intergenic 25.0%
! TCATGAGATTAATCTTCTTA+AGG - Chr2:64330343-64330362 None:intergenic 25.0%
AAGAATAATATCAGCAGCAA+CGG + Chr2:64331472-64331491 MsG0280010097.01.T01:CDS 30.0%
AAGTTTCTCATACACATTTG+AGG + Chr2:64331896-64331915 MsG0280010097.01.T01:three_prime_UTR 30.0%
AGTTTCTCATACACATTTGA+GGG + Chr2:64331897-64331916 MsG0280010097.01.T01:three_prime_UTR 30.0%
ATATAGGAATGAACTCACTA+GGG - Chr2:64330387-64330406 None:intergenic 30.0%
ATGTGTATGAGAAACTTACA+TGG - Chr2:64331893-64331912 None:intergenic 30.0%
CATGATCACTAAATACAACA+AGG + Chr2:64330358-64330377 MsG0280010097.01.T01:intron 30.0%
GAAAACCAAAATCTTGTCTA+AGG + Chr2:64330163-64330182 MsG0280010097.01.T01:intron 30.0%
GTATATTATCCAGAAACCAA+CGG - Chr2:64331313-64331332 None:intergenic 30.0%
TATATAGGAATGAACTCACT+AGG - Chr2:64330388-64330407 None:intergenic 30.0%
TCATCTTCTTGCTTTCATAA+AGG + Chr2:64330573-64330592 MsG0280010097.01.T01:intron 30.0%
TGTAAAGTAATTTACCAAGG+AGG - Chr2:64331116-64331135 None:intergenic 30.0%
TGTGTATGAGAAACTTACAT+GGG - Chr2:64331892-64331911 None:intergenic 30.0%
TGTGTGATTGTGTACATATA+TGG - Chr2:64330002-64330021 None:intergenic 30.0%
TTAGGAACAAACCAAAAGAA+CGG - Chr2:64330829-64330848 None:intergenic 30.0%
TTGTTGGAATTGTAACTGAA+TGG - Chr2:64330436-64330455 None:intergenic 30.0%
! ACAACACATTTGTAGCTTTA+AGG + Chr2:64329782-64329801 MsG0280010097.01.T01:intron 30.0%
! AGACTTGTTTAGGAAGTTAT+TGG - Chr2:64330461-64330480 None:intergenic 30.0%
! GACTTGTTTAGGAAGTTATT+GGG - Chr2:64330460-64330479 None:intergenic 30.0%
! TTGGTTTCTGGATAATATAC+AGG + Chr2:64331313-64331332 MsG0280010097.01.T01:intron 30.0%
!! TGACAAAGTTGACTTGATTA+AGG + Chr2:64330734-64330753 MsG0280010097.01.T01:CDS 30.0%
ATATTATATGCACACAGCAC+AGG + Chr2:64330072-64330091 MsG0280010097.01.T01:intron 35.0%
ATCACTCTAGTAGTGACAAA+GGG + Chr2:64331536-64331555 MsG0280010097.01.T01:CDS 35.0%
ATGTAAAGTGACAGCTGTTA+CGG + Chr2:64331931-64331950 MsG0280010097.01.T01:three_prime_UTR 35.0%
ATTGAAATTCTCAGATCGAC+CGG - Chr2:64329914-64329933 None:intergenic 35.0%
CAATCTTAGCAATGACATCA+TGG - Chr2:64331246-64331265 None:intergenic 35.0%
GATTTCCAGTCAAAACATCA+AGG - Chr2:64331777-64331796 None:intergenic 35.0%
GGACACAACATTGGAAAAAT+CGG + Chr2:64331337-64331356 MsG0280010097.01.T01:CDS 35.0%
GTTGTGATCTCATTCAACAA+AGG + Chr2:64331359-64331378 MsG0280010097.01.T01:CDS 35.0%
TAGGAAGTTATTGGGTTTGT+TGG - Chr2:64330452-64330471 None:intergenic 35.0%
! AATGTGTTGTTAGATACCGT+CGG - Chr2:64329772-64329791 MsG0280010098.01.T01:CDS 35.0%
! AGAAAATCGAGAGGTATACT+CGG - Chr2:64331418-64331437 None:intergenic 35.0%
! ATCTTGTCTAAGGCTCTATT+TGG + Chr2:64330173-64330192 MsG0280010097.01.T01:intron 35.0%
! GAGAAAGAGAAGACTTGTTT+AGG - Chr2:64330471-64330490 None:intergenic 35.0%
! GTTTCTGGATAATATACAGG+AGG + Chr2:64331316-64331335 MsG0280010097.01.T01:intron 35.0%
! TACACATTTGAGGGTAGTTT+TGG + Chr2:64331906-64331925 MsG0280010097.01.T01:three_prime_UTR 35.0%
! TAGAGCCTTAGACAAGATTT+TGG - Chr2:64330171-64330190 None:intergenic 35.0%
!! CAAAGTTGACTTGATTAAGG+AGG + Chr2:64330737-64330756 MsG0280010097.01.T01:CDS 35.0%
!! TACTATCAGAGTTTGTTGAG+AGG + Chr2:64331619-64331638 MsG0280010097.01.T01:CDS 35.0%
!! TGAATCCTCTAAGATTGAAG+AGG - Chr2:64331074-64331093 None:intergenic 35.0%
!! TTTGCTGTTCTAACTACTTG+TGG + Chr2:64330602-64330621 MsG0280010097.01.T01:intron 35.0%
!!! GATGTTTTGACTGGAAATCA+AGG + Chr2:64331778-64331797 MsG0280010097.01.T01:CDS 35.0%
!!! GATTTTGGTTTTCACTTTCC+AGG - Chr2:64330156-64330175 None:intergenic 35.0%
!!! TCTAACCTTGATGTTTTGAC+TGG + Chr2:64331769-64331788 MsG0280010097.01.T01:CDS 35.0%
AAACGGTTTCTATGAGAAGC+AGG + Chr2:64330683-64330702 MsG0280010097.01.T01:CDS 40.0%
AGCATAAGCAGAAACCAATC+TGG - Chr2:64331695-64331714 None:intergenic 40.0%
ATAAGGCTAATGAGATCCGT+TGG + Chr2:64331294-64331313 MsG0280010097.01.T01:intron 40.0%
ATAATGTTATCGTCAGGCCT+TGG - Chr2:64331039-64331058 None:intergenic 40.0%
ATCTTAGAGGATTCATCGCA+CGG + Chr2:64331079-64331098 MsG0280010097.01.T01:CDS 40.0%
CAAAAGAACGGAATCTCTTG+CGG - Chr2:64330817-64330836 None:intergenic 40.0%
CATCACTCTAGTAGTGACAA+AGG + Chr2:64331535-64331554 MsG0280010097.01.T01:CDS 40.0%
CCTGTTAAACCTGGATAGAA+AGG - Chr2:64330967-64330986 None:intergenic 40.0%
CCTTTCTATCCAGGTTTAAC+AGG + Chr2:64330964-64330983 MsG0280010097.01.T01:CDS 40.0%
CTTCGTCTCTTCTTTCATGA+TGG + Chr2:64330493-64330512 MsG0280010097.01.T01:CDS 40.0%
GAGGACAATGGTGATAGAAA+CGG + Chr2:64330666-64330685 MsG0280010097.01.T01:CDS 40.0%
TATACAGGAGGACACAACAT+TGG + Chr2:64331328-64331347 MsG0280010097.01.T01:intron 40.0%
TCACTTAAGAGCTTACGAGA+CGG - Chr2:64331825-64331844 None:intergenic 40.0%
TCGTAAGCTCTTAAGTGAGT+TGG + Chr2:64331827-64331846 MsG0280010097.01.T01:exon 40.0%
TCTGCTTATGCTTCAGATGA+CGG + Chr2:64331703-64331722 MsG0280010097.01.T01:CDS 40.0%
TGTACGACTTTCAAGGAACA+GGG + Chr2:64331383-64331402 MsG0280010097.01.T01:CDS 40.0%
TTGAAATTCTCAGATCGACC+GGG - Chr2:64329913-64329932 MsG0280010098.01.T01:CDS 40.0%
TTTGACTGGAAATCAAGGTC+AGG + Chr2:64331783-64331802 MsG0280010097.01.T01:CDS 40.0%
! ATGTGATGCTTCCTTGCTAT+TGG + Chr2:64330644-64330663 MsG0280010097.01.T01:CDS 40.0%
! GAAGCATCACATCCCTAATT+TGG - Chr2:64330636-64330655 None:intergenic 40.0%
!! AGAGTTTGTTGAGAGGAAGA+GGG + Chr2:64331626-64331645 MsG0280010097.01.T01:CDS 40.0%
!! AGTTGACTTGATTAAGGAGG+AGG + Chr2:64330740-64330759 MsG0280010097.01.T01:CDS 40.0%
!! GTAACAGCTGTCACTTTACA+TGG - Chr2:64331932-64331951 None:intergenic 40.0%
!! GTAGCTTTAAGGTTTCCATG+AGG + Chr2:64329793-64329812 MsG0280010097.01.T01:intron 40.0%
!! TAATGAGATCCGTTGGTTTC+TGG + Chr2:64331301-64331320 MsG0280010097.01.T01:intron 40.0%
!!! TAGCCTGCAATCGTTTTTTC+AGG + Chr2:64330996-64331015 MsG0280010097.01.T01:CDS 40.0%
ACCATTGTCCTCCAATAGCA+AGG - Chr2:64330658-64330677 None:intergenic 45.0%
ACCTGACTGAGAAAATCGAG+AGG - Chr2:64331427-64331446 None:intergenic 45.0%
ACTGGAAATCAAGGTCAGGT+TGG + Chr2:64331787-64331806 MsG0280010097.01.T01:CDS 45.0%
AGGCAACTGATCAGATTCCA+AGG + Chr2:64331019-64331038 MsG0280010097.01.T01:CDS 45.0%
ATCCTTTGAGCCCATGTTGA+CGG + Chr2:64329874-64329893 MsG0280010097.01.T01:intron 45.0%
CAAAGGCTGTACGACTTTCA+AGG + Chr2:64331376-64331395 MsG0280010097.01.T01:CDS 45.0%
CACTTAAGAGCTTACGAGAC+GGG - Chr2:64331824-64331843 None:intergenic 45.0%
CCTCCTGAAAAAACGATTGC+AGG - Chr2:64331002-64331021 None:intergenic 45.0%
CTGCACCTCTTCAATCTTAG+AGG + Chr2:64331066-64331085 MsG0280010097.01.T01:CDS 45.0%
CTGTACGACTTTCAAGGAAC+AGG + Chr2:64331382-64331401 MsG0280010097.01.T01:CDS 45.0%
CTTTCATGATGGCTTCATCC+AGG + Chr2:64330504-64330523 MsG0280010097.01.T01:CDS 45.0%
GCTGTTCTAACTACTTGTGG+TGG + Chr2:64330605-64330624 MsG0280010097.01.T01:intron 45.0%
GGTCGAAATGGAGATAGTTC+AGG + Chr2:64329824-64329843 MsG0280010097.01.T01:intron 45.0%
GTGCGCATAATGTTATCGTC+AGG - Chr2:64331045-64331064 None:intergenic 45.0%
GTGTCAAAAGATGCTCCAGA+TGG - Chr2:64331595-64331614 None:intergenic 45.0%
TCAAGAGAAGACTGCCAGAT+TGG + Chr2:64331678-64331697 MsG0280010097.01.T01:CDS 45.0%
TCTTAGAGGATTCATCGCAC+GGG + Chr2:64331080-64331099 MsG0280010097.01.T01:CDS 45.0%
TGAAATTCTCAGATCGACCG+GGG - Chr2:64329912-64329931 MsG0280010098.01.T01:CDS 45.0%
TGACTTGATTAAGGAGGAGG+TGG + Chr2:64330743-64330762 MsG0280010097.01.T01:CDS 45.0%
TTATAGACATGGCCATCGCA+GGG + Chr2:64330934-64330953 MsG0280010097.01.T01:intron 45.0%
TTTATAGACATGGCCATCGC+AGG + Chr2:64330933-64330952 MsG0280010097.01.T01:intron 45.0%
! ACCTCTCGATTTTCTCAGTC+AGG + Chr2:64331423-64331442 MsG0280010097.01.T01:CDS 45.0%
! CGCAAGAGATTCCGTTCTTT+TGG + Chr2:64330815-64330834 MsG0280010097.01.T01:CDS 45.0%
! CTTTCGGATGGATTTCGCAA+GGG + Chr2:64331732-64331751 MsG0280010097.01.T01:CDS 45.0%
! GTTTGCTGATCAACAGCTGA+TGG + Chr2:64331654-64331673 MsG0280010097.01.T01:CDS 45.0%
!! CAGAGTTTGTTGAGAGGAAG+AGG + Chr2:64331625-64331644 MsG0280010097.01.T01:CDS 45.0%
!! CAGATGACGGATCAACCTTT+CGG + Chr2:64331716-64331735 MsG0280010097.01.T01:CDS 45.0%
!! GTGGTGGTGTTGCCAAATTA+GGG + Chr2:64330621-64330640 MsG0280010097.01.T01:intron 45.0%
!! TCCTTGCTATTGGAGGACAA+TGG + Chr2:64330654-64330673 MsG0280010097.01.T01:CDS 45.0%
!! TGATGCTTCCTTGCTATTGG+AGG + Chr2:64330647-64330666 MsG0280010097.01.T01:CDS 45.0%
!! TGTGGTGGTGTTGCCAAATT+AGG + Chr2:64330620-64330639 MsG0280010097.01.T01:intron 45.0%
!!! CCTGCAATCGTTTTTTCAGG+AGG + Chr2:64330999-64331018 MsG0280010097.01.T01:CDS 45.0%
AAAACGGTCCACCGTCAACA+TGG - Chr2:64329888-64329907 MsG0280010098.01.T01:CDS 50.0%
AAACGGTCCACCGTCAACAT+GGG - Chr2:64329887-64329906 MsG0280010098.01.T01:CDS 50.0%
AGCCTCAACTGTGGTCACAA+AGG + Chr2:64331211-64331230 MsG0280010097.01.T01:intron 50.0%
ATAGCAGTCGATGTAGCACG+TGG - Chr2:64329850-64329869 MsG0280010098.01.T01:CDS 50.0%
CCTTGCGAAATCCATCCGAA+AGG - Chr2:64331734-64331753 None:intergenic 50.0%
GGTTTCCATGAGGAACAGCT+CGG + Chr2:64329803-64329822 MsG0280010097.01.T01:intron 50.0%
TCAGATCGACCGGGGAAAAA+CGG - Chr2:64329904-64329923 MsG0280010098.01.T01:CDS 50.0%
TCTCGTCTGCCTGTTAAACC+TGG - Chr2:64330976-64330995 None:intergenic 50.0%
TGCCTTTGTGACCACAGTTG+AGG - Chr2:64331216-64331235 None:intergenic 50.0%
TTGTCATCTGCAGTGCCATC+TGG + Chr2:64331577-64331596 MsG0280010097.01.T01:CDS 50.0%
! CCTTTCGGATGGATTTCGCA+AGG + Chr2:64331731-64331750 MsG0280010097.01.T01:CDS 50.0%
! TCGAGAGGTATACTCGGATC+TGG - Chr2:64331412-64331431 None:intergenic 50.0%
! TGACGGATCAACCTTTCGGA+TGG + Chr2:64331720-64331739 MsG0280010097.01.T01:CDS 50.0%
CACCGTCAACATGGGCTCAA+AGG - Chr2:64329879-64329898 MsG0280010098.01.T01:CDS 55.0%
CTTTGAGCCCATGTTGACGG+TGG + Chr2:64329877-64329896 MsG0280010097.01.T01:intron 55.0%
GAGGAACAGCTCGGTCGAAA+TGG + Chr2:64329812-64329831 MsG0280010097.01.T01:intron 55.0%
GAGGTGGAACAAGCATGTCC+CGG + Chr2:64330759-64330778 MsG0280010097.01.T01:CDS 55.0%
GCTTGATGCAGCCTCAACTG+TGG + Chr2:64331202-64331221 MsG0280010097.01.T01:intron 55.0%
GTCAGCACAAGACACAACGC+CGG - Chr2:64330781-64330800 None:intergenic 55.0%
TCAGCACAAGACACAACGCC+GGG - Chr2:64330780-64330799 None:intergenic 55.0%
TTCGACCGAGCTGTTCCTCA+TGG - Chr2:64329811-64329830 MsG0280010098.01.T01:CDS 55.0%
!! GGTGCTGCTCCTTTCTATCC+AGG + Chr2:64330955-64330974 MsG0280010097.01.T01:CDS 55.0%
AAAGGAGCAGCACCCTGCGA+TGG - Chr2:64330949-64330968 None:intergenic 60.0%
CGGGAAACAGTCAGCCTCCT+TGG + Chr2:64331099-64331118 MsG0280010097.01.T01:CDS 60.0%
!! GACGGTGGACCGTTTTTCCC+CGG + Chr2:64329892-64329911 MsG0280010097.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 64329758 64331969 64329758 ID=MsG0280010097.01;Name=MsG0280010097.01
Chr2 mRNA 64329758 64331969 64329758 ID=MsG0280010097.01.T01;Parent=MsG0280010097.01;Name=MsG0280010097.01.T01;_AED=0.51;_eAED=0.51;_QI=0|0.25|0.2|0.8|0.5|0.6|5|129|327
Chr2 exon 64329758 64329774 64329758 ID=MsG0280010097.01.T01:exon:25493;Parent=MsG0280010097.01.T01
Chr2 exon 64330441 64330525 64330441 ID=MsG0280010097.01.T01:exon:25494;Parent=MsG0280010097.01.T01
Chr2 exon 64330642 64330836 64330642 ID=MsG0280010097.01.T01:exon:25495;Parent=MsG0280010097.01.T01
Chr2 exon 64330940 64331120 64330940 ID=MsG0280010097.01.T01:exon:25496;Parent=MsG0280010097.01.T01
Chr2 exon 64331335 64331969 64331335 ID=MsG0280010097.01.T01:exon:25497;Parent=MsG0280010097.01.T01
Chr2 CDS 64329758 64329774 64329758 ID=MsG0280010097.01.T01:cds;Parent=MsG0280010097.01.T01
Chr2 CDS 64330441 64330525 64330441 ID=MsG0280010097.01.T01:cds;Parent=MsG0280010097.01.T01
Chr2 CDS 64330642 64330836 64330642 ID=MsG0280010097.01.T01:cds;Parent=MsG0280010097.01.T01
Chr2 CDS 64330940 64331120 64330940 ID=MsG0280010097.01.T01:cds;Parent=MsG0280010097.01.T01
Chr2 CDS 64331335 64331840 64331335 ID=MsG0280010097.01.T01:cds;Parent=MsG0280010097.01.T01
Chr2 three_prime_UTR 64331841 64331969 64331841 ID=MsG0280010097.01.T01:three_prime_utr;Parent=MsG0280010097.01.T01
Gene Sequence

>MsG0280010097.01.T01

ATGCATTCATACCGACGTTACAATTCCAACAAACCCAATAACTTCCTAAACAAGTCTTCTCTTTCTCTTCTTCGTCTCTTCTTTCATGATGGCTTCATCCAGGGATGTGATGCTTCCTTGCTATTGGAGGACAATGGTGATAGAAACGGTTTCTATGAGAAGCAGGCTATTCCAAATCAAACATTGAAAGGTTTTGACAAAGTTGACTTGATTAAGGAGGAGGTGGAACAAGCATGTCCCGGCGTTGTGTCTTGTGCTGACATACTTGCTCTTGCCGCAAGAGATTCCGTTCTTTTGACATGGCCATCGCAGGGTGCTGCTCCTTTCTATCCAGGTTTAACAGGCAGACGAGATAGCCTGCAATCGTTTTTTCAGGAGGCAACTGATCAGATTCCAAGGCCTGACGATAACATTATGCGCACACTGCACCTCTTCAATCTTAGAGGATTCATCGCACGGGAAACAGTCAGCCTCCTTGGAGGACACAACATTGGAAAAATCGGTTGTGATCTCATTCAACAAAGGCTGTACGACTTTCAAGGAACAGGGCAACCAGATCCGAGTATACCTCTCGATTTTCTCAGTCAGGTGAAGCTAAACTGTCCTGACAACTGTAAGAATAATATCAGCAGCAACGGCACGTTTTCGATGTTTACAGTTTCAAAGCGAGTGAACGTTCATCACTCTAGTAGTGACAAAGGGATGTCATACATGCAAGCATTGTCATCTGCAGTGCCATCTGGAGCATCTTTTGACACTCACTACTATCAGAGTTTGTTGAGAGGAAGAGGGTTATTGTTTGCTGATCAACAGCTGATGGCTCAAGAGAAGACTGCCAGATTGGTTTCTGCTTATGCTTCAGATGACGGATCAACCTTTCGGATGGATTTCGCAAGGGTTATGTTGAAATTGTCTAACCTTGATGTTTTGACTGGAAATCAAGGTCAGGTTGGTCTGAATTGCTCCCGTCTCGTAAGCTCTTAA
Protein sequence

>MsG0280010097.01.T01

MHSYRRYNSNKPNNFLNKSSLSLLRLFFHDGFIQGCDASLLLEDNGDRNGFYEKQAIPNQTLKGFDKVDLIKEEVEQACPGVVSCADILALAARDSVLLTWPSQGAAPFYPGLTGRRDSLQSFFQEATDQIPRPDDNIMRTLHLFNLRGFIARETVSLLGGHNIGKIGCDLIQQRLYDFQGTGQPDPSIPLDFLSQVKLNCPDNCKNNISSNGTFSMFTVSKRVNVHHSSSDKGMSYMQALSSAVPSGASFDTHYYQSLLRGRGLLFADQQLMAQEKTARLVSAYASDDGSTFRMDFARVMLKLSNLDVLTGNQGQVGLNCSRLVSS*