Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008185.01.T01 | XP_013441887.1 | 87.5 | 312 | 36 | 2 | 1 | 311 | 1 | 310 | 0 | 566 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008185.01.T01 | Q7M443 | 33.66 | 306 | 162 | 12 | 15 | 310 | 1 | 275 | 4.35E-36 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008185.01.T01 | A0A072TEX8 | 87.500 | 312 | 36 | 2 | 1 | 311 | 1 | 310 | 0.0 | 566 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0280008183.01 | MsG0280008185.01 | 0.959217 | 3.369339e-117 | 1.324794e-111 |
| MsG0280008184.01 | MsG0280008185.01 | 0.991106 | 6.359520e-186 | 4.803752e-179 |
| MsG0280008185.01 | MsG0280009667.01 | 0.812513 | 4.082968e-51 | 2.601214e-48 |
| MsG0280008185.01 | MsG0480022833.01 | 0.811283 | 7.565952e-51 | 4.664059e-48 |
| MsG0280008185.01 | MsG0580024202.01 | 0.803565 | 3.280430e-49 | 1.654005e-46 |
| MsG0280008185.01 | MsG0580026492.01 | 0.807595 | 4.681995e-50 | 2.618276e-47 |
| MsG0280008185.01 | MsG0680032461.01 | 0.802286 | 6.030264e-49 | 2.942615e-46 |
| MsG0280008185.01 | MsG0780039912.01 | 0.812298 | 4.549251e-51 | 2.881648e-48 |
| MsG0280008185.01 | MsG0780040991.01 | 0.803650 | 3.150451e-49 | 1.591777e-46 |
| MsG0280008185.01 | MsG0880047398.01 | 0.815340 | 9.719376e-52 | 6.683206e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008185.01.T01 | MTR_0443s0040 | 87.500 | 312 | 36 | 2 | 1 | 311 | 1 | 310 | 0.0 | 566 |
| MsG0280008185.01.T01 | MTR_0062s0170 | 58.333 | 312 | 121 | 6 | 4 | 311 | 3 | 309 | 8.12e-112 | 326 |
| MsG0280008185.01.T01 | MTR_0062s0110 | 58.333 | 312 | 121 | 6 | 4 | 311 | 3 | 309 | 8.12e-112 | 326 |
| MsG0280008185.01.T01 | MTR_0062s0130 | 58.333 | 312 | 121 | 6 | 4 | 311 | 3 | 309 | 8.12e-112 | 326 |
| MsG0280008185.01.T01 | MTR_2g036240 | 58.333 | 312 | 121 | 6 | 4 | 311 | 3 | 309 | 8.12e-112 | 326 |
| MsG0280008185.01.T01 | MTR_2g036260 | 58.333 | 312 | 121 | 6 | 4 | 311 | 3 | 309 | 8.12e-112 | 326 |
| MsG0280008185.01.T01 | MTR_2g036290 | 58.333 | 312 | 121 | 6 | 4 | 311 | 3 | 309 | 8.12e-112 | 326 |
| MsG0280008185.01.T01 | MTR_8g046730 | 58.333 | 312 | 121 | 6 | 4 | 311 | 3 | 309 | 8.12e-112 | 326 |
| MsG0280008185.01.T01 | MTR_0062s0020 | 47.883 | 307 | 137 | 7 | 14 | 308 | 2 | 297 | 9.09e-91 | 273 |
| MsG0280008185.01.T01 | MTR_0002s1060 | 48.675 | 302 | 138 | 4 | 12 | 310 | 12 | 299 | 1.30e-90 | 272 |
| MsG0280008185.01.T01 | MTR_0062s0090 | 47.213 | 305 | 136 | 10 | 16 | 308 | 4 | 295 | 1.83e-79 | 244 |
| MsG0280008185.01.T01 | MTR_0062s0040 | 47.213 | 305 | 136 | 10 | 16 | 308 | 4 | 295 | 1.83e-79 | 244 |
| MsG0280008185.01.T01 | MTR_0062s0060 | 47.213 | 305 | 136 | 10 | 16 | 308 | 4 | 295 | 1.83e-79 | 244 |
| MsG0280008185.01.T01 | MTR_0002s0040 | 43.289 | 298 | 148 | 7 | 14 | 309 | 13 | 291 | 1.62e-74 | 231 |
| MsG0280008185.01.T01 | MTR_0263s0020 | 43.537 | 294 | 145 | 7 | 14 | 305 | 13 | 287 | 9.65e-72 | 224 |
| MsG0280008185.01.T01 | MTR_1457s0010 | 38.934 | 244 | 116 | 5 | 69 | 311 | 1 | 212 | 8.42e-45 | 152 |
| MsG0280008185.01.T01 | MTR_6g079630 | 31.317 | 281 | 158 | 9 | 16 | 287 | 34 | 288 | 1.47e-31 | 120 |
| MsG0280008185.01.T01 | MTR_2g096030 | 32.270 | 282 | 154 | 10 | 16 | 287 | 31 | 285 | 3.39e-29 | 113 |
| MsG0280008185.01.T01 | MTR_2g096040 | 30.909 | 275 | 155 | 11 | 15 | 279 | 3 | 252 | 2.44e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 63 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAAATCATCTAAAGTTTC+TGG | 0.145221 | 2:+26897933 | None:intergenic |
| AATCAATTCCACTTCATTCT+AGG | 0.205618 | 2:-26897885 | MsG0280008185.01.T01:CDS |
| CCCACTACCACAAATTGTTT+TGG | 0.245343 | 2:-26897419 | MsG0280008185.01.T01:CDS |
| TGTAGCTAGTAATCAATTAT+TGG | 0.294200 | 2:+26897086 | None:intergenic |
| ATTCAATCCTAAGGAGAAAA+AGG | 0.297710 | 2:-26897703 | MsG0280008185.01.T01:CDS |
| GGACACATATTCCATGGATT+TGG | 0.302531 | 2:+26897467 | None:intergenic |
| TTACGGTGAGCTTAAACTTT+TGG | 0.347612 | 2:-26897295 | MsG0280008185.01.T01:CDS |
| GATATGTCTGATCGAGCTTA+TGG | 0.361529 | 2:+26897665 | None:intergenic |
| CCCAAAACAATTTGTGGTAG+TGG | 0.365132 | 2:+26897418 | None:intergenic |
| TACCTTGTCAATGATGATTC+TGG | 0.380807 | 2:-26897624 | MsG0280008185.01.T01:CDS |
| CGGGACATTTCGTTCGCGAT+TGG | 0.385507 | 2:-26897827 | MsG0280008185.01.T01:CDS |
| ACAATTTGTGGTAGTGGGCT+TGG | 0.408360 | 2:+26897424 | None:intergenic |
| CACTGCACTAGCATAATTGA+TGG | 0.434540 | 2:-26897594 | MsG0280008185.01.T01:CDS |
| AATCAACTAATAACGGATTA+CGG | 0.451454 | 2:-26897312 | MsG0280008185.01.T01:CDS |
| ATCATCAAACTCATCCTTTG+AGG | 0.453286 | 2:+26897341 | None:intergenic |
| CGGTTCATCTTAGTATCAGC+TGG | 0.454457 | 2:+26897255 | None:intergenic |
| GAAAATCATCTAAAGTTTCT+GGG | 0.456174 | 2:+26897934 | None:intergenic |
| TCATCATTGATGATCTCAAC+AGG | 0.458322 | 2:+26897912 | None:intergenic |
| AGCATTTCCTCCAAGATGTA+AGG | 0.467593 | 2:+26897123 | None:intergenic |
| TGTGGTCCCAAAACAATTTG+TGG | 0.468651 | 2:+26897412 | None:intergenic |
| GATGTCATTGCTCGGTGGGT+TGG | 0.481116 | 2:+26897149 | None:intergenic |
| TATATCGATTCTAGTGTGAC+TGG | 0.486159 | 2:-26897552 | MsG0280008185.01.T01:CDS |
| GCCACTGAGGTGTATAAAGA+TGG | 0.489071 | 2:-26897858 | MsG0280008185.01.T01:CDS |
| AACCGAGAGGTGTTCATTGA+GGG | 0.499384 | 2:-26897237 | MsG0280008185.01.T01:CDS |
| CGCCCTCAATGAACACCTCT+CGG | 0.504404 | 2:+26897235 | None:intergenic |
| TGACATCGAGCCTTACATCT+TGG | 0.507062 | 2:-26897133 | MsG0280008185.01.T01:CDS |
| TCTCTACAATCAACTAATAA+CGG | 0.510522 | 2:-26897319 | MsG0280008185.01.T01:CDS |
| CCAAAACAATTTGTGGTAGT+GGG | 0.514829 | 2:+26897419 | None:intergenic |
| TATAAAGATGGAAAAGGAAC+GGG | 0.518546 | 2:-26897846 | MsG0280008185.01.T01:CDS |
| CTAGTAATCAATTATTGGTA+AGG | 0.518596 | 2:+26897091 | None:intergenic |
| ATCAACAGCAAATCACTCCT+TGG | 0.519679 | 2:-26897201 | MsG0280008185.01.T01:CDS |
| TAAATATCCATTCAATCCTA+AGG | 0.520789 | 2:-26897712 | MsG0280008185.01.T01:CDS |
| GCTGACTTCTCCAACTGCAT+TGG | 0.521072 | 2:-26897528 | MsG0280008185.01.T01:CDS |
| AATAACTTGTCCAATGCAGT+TGG | 0.521593 | 2:+26897518 | None:intergenic |
| ATTTGTGGTAGTGGGCTTGG+AGG | 0.527426 | 2:+26897427 | None:intergenic |
| GCTCGATGTCATTGCTCGGT+GGG | 0.532171 | 2:+26897145 | None:intergenic |
| GAGGAGCTCTGTCGGAGCAA+TGG | 0.538177 | 2:+26897446 | None:intergenic |
| ATGAAGGTTATGATAACTAT+CGG | 0.552996 | 2:-26897747 | MsG0280008185.01.T01:CDS |
| CATCGAGCCTTACATCTTGG+AGG | 0.554478 | 2:-26897130 | MsG0280008185.01.T01:CDS |
| TCGAGAATACATTGGCGTGA+AGG | 0.556428 | 2:-26897961 | MsG0280008185.01.T01:CDS |
| GAAAGAACATAAGAATATGA+AGG | 0.556511 | 2:-26897763 | MsG0280008185.01.T01:CDS |
| TAAGCATGTATCCAAATCCA+TGG | 0.557313 | 2:-26897478 | MsG0280008185.01.T01:CDS |
| CATCTTAGTATCAGCTGGAT+CGG | 0.557541 | 2:+26897260 | None:intergenic |
| TGAATGGATATTTAGTGCCA+TGG | 0.560003 | 2:+26897721 | None:intergenic |
| GAGGTGTATAAAGATGGAAA+AGG | 0.564302 | 2:-26897852 | MsG0280008185.01.T01:CDS |
| GAACCGAGAGGTGTTCATTG+AGG | 0.566347 | 2:-26897238 | MsG0280008185.01.T01:CDS |
| CAATCAAACTATATCCTCAA+AGG | 0.567378 | 2:-26897355 | MsG0280008185.01.T01:CDS |
| AGCAATGGACACATATTCCA+TGG | 0.567858 | 2:+26897461 | None:intergenic |
| GGCTCGATGTCATTGCTCGG+TGG | 0.574776 | 2:+26897144 | None:intergenic |
| ATATCGATTCTAGTGTGACT+GGG | 0.576037 | 2:-26897551 | MsG0280008185.01.T01:CDS |
| TGGGCTTGGAGGAGCTCTGT+CGG | 0.577415 | 2:+26897438 | None:intergenic |
| ATGATAACTATCGGAGGCCA+TGG | 0.579102 | 2:-26897738 | MsG0280008185.01.T01:CDS |
| TAAGGCTCGATGTCATTGCT+CGG | 0.600452 | 2:+26897141 | None:intergenic |
| AGTTATTAAACATCTCAAGA+AGG | 0.601516 | 2:-26897502 | MsG0280008185.01.T01:CDS |
| GTATAAAGATGGAAAAGGAA+CGG | 0.613441 | 2:-26897847 | MsG0280008185.01.T01:CDS |
| TGGCGAAGCCTAGAATGAAG+TGG | 0.614487 | 2:+26897877 | None:intergenic |
| TACCAGAATCATCATTGACA+AGG | 0.665409 | 2:+26897622 | None:intergenic |
| TCCATCTTTATACACCTCAG+TGG | 0.670679 | 2:+26897857 | None:intergenic |
| CATCAATTATGCTAGTGCAG+TGG | 0.677859 | 2:+26897595 | None:intergenic |
| CATTCTAGGCTTCGCCACTG+AGG | 0.701525 | 2:-26897871 | MsG0280008185.01.T01:CDS |
| AAGGTTATGATAACTATCGG+AGG | 0.701816 | 2:-26897744 | MsG0280008185.01.T01:CDS |
| TATCGATTCTAGTGTGACTG+GGG | 0.708158 | 2:-26897550 | MsG0280008185.01.T01:CDS |
| TGATACTAAGATGAACCGAG+AGG | 0.777827 | 2:-26897250 | MsG0280008185.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AGTTATTAAACATCTCAAGA+AGG | - | Chr2:26897607-26897626 | MsG0280008185.01.T01:CDS | 25.0% |
| ! | ATGAAGGTTATGATAACTAT+CGG | - | Chr2:26897362-26897381 | MsG0280008185.01.T01:CDS | 25.0% |
| ! | ATGTATTCTCGAAAAATTGT+TGG | + | Chr2:26897140-26897159 | None:intergenic | 25.0% |
| ! | GAAAGAACATAAGAATATGA+AGG | - | Chr2:26897346-26897365 | MsG0280008185.01.T01:CDS | 25.0% |
| ! | TAAATATCCATTCAATCCTA+AGG | - | Chr2:26897397-26897416 | MsG0280008185.01.T01:CDS | 25.0% |
| ! | TCTCTACAATCAACTAATAA+CGG | - | Chr2:26897790-26897809 | MsG0280008185.01.T01:CDS | 25.0% |
| !! | GAAAATCATCTAAAGTTTCT+GGG | + | Chr2:26897178-26897197 | None:intergenic | 25.0% |
| !!! | AATCAACTAATAACGGATTA+CGG | - | Chr2:26897797-26897816 | MsG0280008185.01.T01:CDS | 25.0% |
| !!! | ACAATTTTTCGAGAATACAT+TGG | - | Chr2:26897140-26897159 | MsG0280008185.01.T01:CDS | 25.0% |
| AATCAATTCCACTTCATTCT+AGG | - | Chr2:26897224-26897243 | MsG0280008185.01.T01:CDS | 30.0% | |
| ATTCAATCCTAAGGAGAAAA+AGG | - | Chr2:26897406-26897425 | MsG0280008185.01.T01:CDS | 30.0% | |
| CAATCAAACTATATCCTCAA+AGG | - | Chr2:26897754-26897773 | MsG0280008185.01.T01:CDS | 30.0% | |
| GTATAAAGATGGAAAAGGAA+CGG | - | Chr2:26897262-26897281 | MsG0280008185.01.T01:CDS | 30.0% | |
| TATAAAGATGGAAAAGGAAC+GGG | - | Chr2:26897263-26897282 | MsG0280008185.01.T01:CDS | 30.0% | |
| ! | AAAAATTGTTGGCCTCAAAA+CGG | + | Chr2:26897129-26897148 | None:intergenic | 30.0% |
| ! | GGAAAATCATCTAAAGTTTC+TGG | + | Chr2:26897179-26897198 | None:intergenic | 30.0% |
| ! | TTTTTCTCCTTAGGATTGAA+TGG | + | Chr2:26897407-26897426 | None:intergenic | 30.0% |
| !! | CATAGTTGATATCCATTTTG+TGG | + | Chr2:26897718-26897737 | None:intergenic | 30.0% |
| !!! | TGTGTTTGAACACTTTTTCT+GGG | + | Chr2:26897325-26897344 | None:intergenic | 30.0% |
| !!! | TTGTGTTTGAACACTTTTTC+TGG | + | Chr2:26897326-26897345 | None:intergenic | 30.0% |
| AAGGTTATGATAACTATCGG+AGG | - | Chr2:26897365-26897384 | MsG0280008185.01.T01:CDS | 35.0% | |
| ATCATCAAACTCATCCTTTG+AGG | + | Chr2:26897771-26897790 | None:intergenic | 35.0% | |
| ATCCTAAGGAGAAAAAGGTA+TGG | - | Chr2:26897411-26897430 | MsG0280008185.01.T01:CDS | 35.0% | |
| CCAAAACAATTTGTGGTAGT+GGG | + | Chr2:26897693-26897712 | None:intergenic | 35.0% | |
| GAGGTGTATAAAGATGGAAA+AGG | - | Chr2:26897257-26897276 | MsG0280008185.01.T01:CDS | 35.0% | |
| TAAGCATGTATCCAAATCCA+TGG | - | Chr2:26897631-26897650 | MsG0280008185.01.T01:CDS | 35.0% | |
| TACCAGAATCATCATTGACA+AGG | + | Chr2:26897490-26897509 | None:intergenic | 35.0% | |
| TACCTTGTCAATGATGATTC+TGG | - | Chr2:26897485-26897504 | MsG0280008185.01.T01:CDS | 35.0% | |
| TGAATGGATATTTAGTGCCA+TGG | + | Chr2:26897391-26897410 | None:intergenic | 35.0% | |
| ! | AATAACTTGTCCAATGCAGT+TGG | + | Chr2:26897594-26897613 | None:intergenic | 35.0% |
| ! | ATCCATACCTTTTTCTCCTT+AGG | + | Chr2:26897416-26897435 | None:intergenic | 35.0% |
| ! | CCACTACCACAAATTGTTTT+GGG | - | Chr2:26897691-26897710 | MsG0280008185.01.T01:CDS | 35.0% |
| ! | TCATCATTGATGATCTCAAC+AGG | + | Chr2:26897200-26897219 | None:intergenic | 35.0% |
| ! | TTACGGTGAGCTTAAACTTT+TGG | - | Chr2:26897814-26897833 | MsG0280008185.01.T01:CDS | 35.0% |
| !! | ATATCGATTCTAGTGTGACT+GGG | - | Chr2:26897558-26897577 | MsG0280008185.01.T01:CDS | 35.0% |
| !! | TATATCGATTCTAGTGTGAC+TGG | - | Chr2:26897557-26897576 | MsG0280008185.01.T01:CDS | 35.0% |
| !!! | ACAATATCAATGCCGTTTTG+AGG | - | Chr2:26897114-26897133 | MsG0280008185.01.T01:CDS | 35.0% |
| !!! | ATTGTTTTGGGACCACAAAA+TGG | - | Chr2:26897703-26897722 | MsG0280008185.01.T01:CDS | 35.0% |
| AGCAATGGACACATATTCCA+TGG | + | Chr2:26897651-26897670 | None:intergenic | 40.0% | |
| AGCATTTCCTCCAAGATGTA+AGG | + | Chr2:26897989-26898008 | None:intergenic | 40.0% | |
| ATCAACAGCAAATCACTCCT+TGG | - | Chr2:26897908-26897927 | MsG0280008185.01.T01:CDS | 40.0% | |
| CACTCCAAACAAAAAGTCCA+AGG | + | Chr2:26897928-26897947 | None:intergenic | 40.0% | |
| CACTGCACTAGCATAATTGA+TGG | - | Chr2:26897515-26897534 | MsG0280008185.01.T01:CDS | 40.0% | |
| CATCAATTATGCTAGTGCAG+TGG | + | Chr2:26897517-26897536 | None:intergenic | 40.0% | |
| CATCTTAGTATCAGCTGGAT+CGG | + | Chr2:26897852-26897871 | None:intergenic | 40.0% | |
| CCCAAAACAATTTGTGGTAG+TGG | + | Chr2:26897694-26897713 | None:intergenic | 40.0% | |
| GATATGTCTGATCGAGCTTA+TGG | + | Chr2:26897447-26897466 | None:intergenic | 40.0% | |
| GGACACATATTCCATGGATT+TGG | + | Chr2:26897645-26897664 | None:intergenic | 40.0% | |
| TCCATCTTTATACACCTCAG+TGG | + | Chr2:26897255-26897274 | None:intergenic | 40.0% | |
| TGATACTAAGATGAACCGAG+AGG | - | Chr2:26897859-26897878 | MsG0280008185.01.T01:CDS | 40.0% | |
| TGTGGTCCCAAAACAATTTG+TGG | + | Chr2:26897700-26897719 | None:intergenic | 40.0% | |
| ! | CACTCCTTGGACTTTTTGTT+TGG | - | Chr2:26897921-26897940 | MsG0280008185.01.T01:CDS | 40.0% |
| ! | CCCACTACCACAAATTGTTT+TGG | - | Chr2:26897690-26897709 | MsG0280008185.01.T01:CDS | 40.0% |
| !! | TATCGATTCTAGTGTGACTG+GGG | - | Chr2:26897559-26897578 | MsG0280008185.01.T01:CDS | 40.0% |
| ATGATAACTATCGGAGGCCA+TGG | - | Chr2:26897371-26897390 | MsG0280008185.01.T01:CDS | 45.0% | |
| CGGTTCATCTTAGTATCAGC+TGG | + | Chr2:26897857-26897876 | None:intergenic | 45.0% | |
| GCCACTGAGGTGTATAAAGA+TGG | - | Chr2:26897251-26897270 | MsG0280008185.01.T01:CDS | 45.0% | |
| TAAGGCTCGATGTCATTGCT+CGG | + | Chr2:26897971-26897990 | None:intergenic | 45.0% | |
| TCGAGAATACATTGGCGTGA+AGG | - | Chr2:26897148-26897167 | MsG0280008185.01.T01:CDS | 45.0% | |
| TGACATCGAGCCTTACATCT+TGG | - | Chr2:26897976-26897995 | MsG0280008185.01.T01:CDS | 45.0% | |
| ! | GGTGAGCTTAAACTTTTGGC+AGG | - | Chr2:26897818-26897837 | MsG0280008185.01.T01:CDS | 45.0% |
| !! | AACCGAGAGGTGTTCATTGA+GGG | - | Chr2:26897872-26897891 | MsG0280008185.01.T01:CDS | 45.0% |
| !! | ACAATTTGTGGTAGTGGGCT+TGG | + | Chr2:26897688-26897707 | None:intergenic | 45.0% |
| CATCGAGCCTTACATCTTGG+AGG | - | Chr2:26897979-26897998 | MsG0280008185.01.T01:CDS | 50.0% | |
| TGGCGAAGCCTAGAATGAAG+TGG | + | Chr2:26897235-26897254 | None:intergenic | 50.0% | |
| ! | GCTGACTTCTCCAACTGCAT+TGG | - | Chr2:26897581-26897600 | MsG0280008185.01.T01:CDS | 50.0% |
| !! | ATTTGTGGTAGTGGGCTTGG+AGG | + | Chr2:26897685-26897704 | None:intergenic | 50.0% |
| !! | GAACCGAGAGGTGTTCATTG+AGG | - | Chr2:26897871-26897890 | MsG0280008185.01.T01:CDS | 50.0% |
| CATTCTAGGCTTCGCCACTG+AGG | - | Chr2:26897238-26897257 | MsG0280008185.01.T01:CDS | 55.0% | |
| CGCCCTCAATGAACACCTCT+CGG | + | Chr2:26897877-26897896 | None:intergenic | 55.0% | |
| CGGGACATTTCGTTCGCGAT+TGG | - | Chr2:26897282-26897301 | MsG0280008185.01.T01:CDS | 55.0% | |
| GCTCGATGTCATTGCTCGGT+GGG | + | Chr2:26897967-26897986 | None:intergenic | 55.0% | |
| ! | GATGTCATTGCTCGGTGGGT+TGG | + | Chr2:26897963-26897982 | None:intergenic | 55.0% |
| GAGGAGCTCTGTCGGAGCAA+TGG | + | Chr2:26897666-26897685 | None:intergenic | 60.0% | |
| GGCTCGATGTCATTGCTCGG+TGG | + | Chr2:26897968-26897987 | None:intergenic | 60.0% | |
| TGGGCTTGGAGGAGCTCTGT+CGG | + | Chr2:26897674-26897693 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 26897098 | 26898033 | 26897098 | ID=MsG0280008185.01;Name=MsG0280008185.01 |
| Chr2 | mRNA | 26897098 | 26898033 | 26897098 | ID=MsG0280008185.01.T01;Parent=MsG0280008185.01;Name=MsG0280008185.01.T01;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|1|1|0|311 |
| Chr2 | exon | 26897098 | 26898033 | 26897098 | ID=MsG0280008185.01.T01:exon:14220;Parent=MsG0280008185.01.T01 |
| Chr2 | CDS | 26897098 | 26898033 | 26897098 | ID=MsG0280008185.01.T01:cds;Parent=MsG0280008185.01.T01 |
| Gene Sequence |
| Protein sequence |
