AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009667.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009667.01.T01 MTR_2g069320 97.031 842 25 0 18 859 2 843 0.0 1709
MsG0280009667.01.T01 MTR_2g069310 86.105 842 117 0 18 859 2 843 0.0 1543
MsG0280009667.01.T01 MTR_2g069050 85.986 842 118 0 18 859 2 843 0.0 1542
MsG0280009667.01.T01 MTR_1g048000 85.748 842 120 0 18 859 2 843 0.0 1535
MsG0280009667.01.T01 MTR_4g116430 39.188 837 472 11 36 849 140 962 0.0 610
MsG0280009667.01.T01 MTR_4g119340 30.408 980 477 24 32 826 11 970 6.37e-138 436
MsG0280009667.01.T01 MTR_4g101750 24.819 830 451 26 21 822 79 763 1.72e-39 157
MsG0280009667.01.T01 MTR_4g101750 24.519 779 416 24 21 771 79 713 6.94e-34 140
MsG0280009667.01.T01 MTR_7g009740 39.535 172 96 4 12 178 40 208 2.24e-27 119
MsG0280009667.01.T01 MTR_3g097250 42.361 144 70 2 34 177 82 212 4.71e-23 105
MsG0280009667.01.T01 MTR_1g052535 38.235 170 85 4 12 178 57 209 2.39e-22 102
MsG0280009667.01.T01 MTR_1g052535 38.235 170 85 4 12 178 57 209 5.88e-22 102
MsG0280009667.01.T01 MTR_4g079360 38.776 147 68 3 33 178 55 180 5.81e-20 95.5
MsG0280009667.01.T01 MTR_3g101820 89.362 47 5 0 488 534 19 65 9.53e-19 82.0
MsG0280009667.01.T01 MTR_7g044770 37.195 164 80 4 21 178 48 194 3.63e-18 90.1
MsG0280009667.01.T01 MTR_2g020660 36.364 165 80 5 21 178 41 187 3.59e-16 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009667.01.T01 AT1G56070 84.917 842 127 0 18 859 2 843 0.0 1523
MsG0280009667.01.T01 AT1G56070 84.917 842 127 0 18 859 2 843 0.0 1523
MsG0280009667.01.T01 AT1G56070 84.917 842 127 0 18 859 2 843 0.0 1523
MsG0280009667.01.T01 AT3G12915 76.722 842 141 4 18 859 2 788 0.0 1335
MsG0280009667.01.T01 AT1G06220 38.305 838 480 11 35 849 138 961 0.0 600
MsG0280009667.01.T01 AT1G06220 38.305 838 480 11 35 849 138 961 0.0 600
MsG0280009667.01.T01 AT1G06220 38.305 838 480 11 35 849 138 961 0.0 600
MsG0280009667.01.T01 AT5G25230 37.783 839 483 10 35 849 124 947 0.0 588
MsG0280009667.01.T01 AT5G25230 37.783 839 483 10 35 849 124 947 0.0 588
MsG0280009667.01.T01 AT3G22980 31.346 973 465 27 35 826 9 959 6.19e-139 438
MsG0280009667.01.T01 AT3G22980 31.346 973 465 27 35 826 9 959 6.19e-139 438
MsG0280009667.01.T01 AT3G22980 31.346 973 465 27 35 826 9 959 6.19e-139 438
MsG0280009667.01.T01 AT1G62750 25.826 817 434 25 34 822 95 767 2.19e-43 169
MsG0280009667.01.T01 AT5G39900 43.750 144 73 2 35 178 66 201 1.96e-25 112
MsG0280009667.01.T01 AT5G13650 42.000 150 71 2 29 178 76 209 1.52e-24 110
MsG0280009667.01.T01 AT5G13650 42.000 150 71 2 29 178 77 210 1.59e-24 110
MsG0280009667.01.T01 AT5G08650 40.972 144 72 2 34 177 85 215 9.08e-22 101
MsG0280009667.01.T01 AT5G08650 40.972 144 72 2 34 177 85 215 1.16e-21 101
MsG0280009667.01.T01 AT2G31060 38.776 147 68 3 33 178 57 182 1.31e-20 97.8
MsG0280009667.01.T01 AT2G31060 37.748 151 68 4 33 178 57 186 8.38e-19 92.0
MsG0280009667.01.T01 AT1G45332 37.342 158 76 5 27 178 57 197 4.44e-17 86.7
MsG0280009667.01.T01 AT2G45030 37.342 158 76 5 27 178 57 197 5.05e-17 86.3

Find 213 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGACTTTGCTAACCGTTTA+AGG 0.119547 2:-55961343 None:intergenic
CCCAGCTAGTACTGCCCTTT+TGG 0.184897 2:+55960800 MsG0280009667.01.T01:CDS
TTCAATTCAATGAATCATTA+AGG 0.185839 2:+55962158 MsG0280009667.01.T01:CDS
GAAAACTTCATAGCTCTAAT+AGG 0.240544 2:-55961251 None:intergenic
TTTGAGACATAAAGTATTAA+AGG 0.246601 2:-55960945 None:intergenic
ATTTGTTAAAGTAGCATTCT+TGG 0.254080 2:-55961207 None:intergenic
TGGTATGAAGGTCAGAATTA+TGG 0.254706 2:+55961037 MsG0280009667.01.T01:CDS
TTCTCCCCAGGGATATAATT+TGG 0.264289 2:-55961062 None:intergenic
TTTCTTGAGCTTCATCTTGA+TGG 0.269142 2:+55960312 MsG0280009667.01.T01:CDS
GTGTTCAGAGAACGGTTATT+TGG 0.275230 2:+55961105 MsG0280009667.01.T01:CDS
TGCTTTACTTGGTGATGTTC+AGG 0.276005 2:+55960404 MsG0280009667.01.T01:CDS
ATCAAGGACTCTGTCGTTAC+AGG 0.276347 2:+55961800 MsG0280009667.01.T01:CDS
AATTGAAATGATTCAATAAC+AGG 0.276427 2:-55962142 None:intergenic
TACAGTTGCCATGGTGGGTT+TGG 0.308319 2:+55961172 MsG0280009667.01.T01:CDS
AAGATGTATGCTTCAAAGTT+TGG 0.309421 2:+55960501 MsG0280009667.01.T01:CDS
GTCCTTCAGGATCACAATTT+CGG 0.317185 2:-55960923 None:intergenic
AAAATATTGTCTGACGAGTT+TGG 0.324390 2:+55961674 MsG0280009667.01.T01:CDS
AGTTCAATAATCTGCTTGAT+TGG 0.339237 2:-55960654 None:intergenic
GTGAGTCAATGAGGTTTATA+AGG 0.340162 2:-55960116 None:intergenic
CTCAGTTGGTATTTGACCAC+TGG 0.343999 2:+55962206 MsG0280009667.01.T01:CDS
TCTGCAAGCCCTTCCTCCAT+TGG 0.345914 2:-55961599 None:intergenic
TAAAGTATTAAAGGTCCTTC+AGG 0.364617 2:-55960936 None:intergenic
ACTTCTAGAGCCGGTGTATC+TGG 0.365876 2:+55961994 MsG0280009667.01.T01:CDS
ATGTTGGGACCTGTTGTCTC+AGG 0.369342 2:-55961737 None:intergenic
TCAATTCAATGAATCATTAA+GGG 0.375293 2:+55962159 MsG0280009667.01.T01:CDS
GAAGATGATGAATAGGCTTT+GGG 0.376967 2:+55960536 MsG0280009667.01.T01:CDS
AATCTGCTTGAAGGATTTGC+AGG 0.377398 2:+55961439 MsG0280009667.01.T01:CDS
GTGACTTGCTCATCACAGTA+TGG 0.379815 2:-55961541 None:intergenic
ATGATTCCTGCCTCTGATAA+TGG 0.380707 2:+55960969 MsG0280009667.01.T01:CDS
AGAAGATGATGAATAGGCTT+TGG 0.382387 2:+55960535 MsG0280009667.01.T01:CDS
TATAAACGGTTGTGTTTGTT+TGG 0.384951 2:-55961563 None:intergenic
ACATTGTAAAGTGGGGTGTT+AGG 0.384986 2:-55962106 None:intergenic
GATTCTCTTGTGGCTGCTGC+TGG 0.385434 2:+55959931 MsG0280009667.01.T01:CDS
TCCAAAAGGGCAGTACTAGC+TGG 0.392859 2:-55960801 None:intergenic
TCAGAAGAGAAAGAATTAAC+AGG 0.400032 2:+55960741 MsG0280009667.01.T01:CDS
GCCATCGATGATGGAAAGAT+TGG 0.405001 2:+55961623 MsG0280009667.01.T01:CDS
GGTATGAAGGTCAGAATTAT+GGG 0.407591 2:+55961038 MsG0280009667.01.T01:CDS
TTGCAGGATGATTTCATGAA+TGG 0.410509 2:+55961455 MsG0280009667.01.T01:CDS
TTTCAGCTGGTTTACATGGA+TGG 0.412263 2:+55960454 MsG0280009667.01.T01:CDS
TCACCTTCCTTCTCCTGCCA+AGG 0.414617 2:+55960836 MsG0280009667.01.T01:CDS
ATGAGGAGAAGATGATGAAT+AGG 0.414774 2:+55960529 MsG0280009667.01.T01:CDS
TGGCCGATGTTGCAGAAACT+TGG 0.418163 2:+55960705 MsG0280009667.01.T01:CDS
TATTCCGAATGTTGTGTTTG+AGG 0.418698 2:-55959581 None:intergenic
GCCTTGCTTCCATGTATAAA+CGG 0.419701 2:-55961577 None:intergenic
TTTAAGGCCTTCGACTAGCT+TGG 0.419952 2:-55961327 None:intergenic
GCATCTTGAAATCTGCTTGA+AGG 0.420241 2:+55961430 MsG0280009667.01.T01:CDS
AAAACTTCATAGCTCTAATA+GGG 0.423620 2:-55961250 None:intergenic
CATGTGTCTACCACCATGTT+GGG 0.425317 2:-55961752 None:intergenic
AGCATACATCTTAGCAAAGT+TGG 0.430109 2:-55960490 None:intergenic
GCGTGCAGCAGCTGGTGTCC+CGG 0.431581 2:-55962257 None:intergenic
CACCCCACTTTACAATGTTA+AGG 0.431869 2:+55962111 MsG0280009667.01.T01:CDS
TTAAGGCCTTCGACTAGCTT+GGG 0.432058 2:-55961326 None:intergenic
TGTTCAGGTTTACCCTGAAA+AGG 0.436512 2:+55960419 MsG0280009667.01.T01:CDS
TACAAATCTTTCTTCTCCCC+AGG 0.446602 2:-55961074 None:intergenic
AAGAGGTTGCAGGAGAGGTT+AGG 0.455339 2:+55959965 MsG0280009667.01.T01:CDS
GTTGTGGTGGATTGTGTTGA+AGG 0.456660 2:+55960201 MsG0280009667.01.T01:CDS
GAATCATTAAGGGCTCAAAC+TGG 0.462473 2:+55962169 MsG0280009667.01.T01:CDS
ATTGTCTGACGAGTTTGGTT+GGG 0.467370 2:+55961679 MsG0280009667.01.T01:CDS
CACTTAAAAGCAGGCAACTC+AGG 0.469933 2:-55956974 None:intergenic
GAAGAATTTCAAGGGACAAC+GGG 0.470937 2:+55960080 MsG0280009667.01.T01:CDS
CTTGCAGAGGCCATCGATGA+TGG 0.471514 2:+55961614 MsG0280009667.01.T01:CDS
TTCTAGCAGTTGGAATGATC+TGG 0.474433 2:-55961934 None:intergenic
CTGGCCGCCTCCTCTGTGAA+TGG 0.475122 2:-55961915 None:intergenic
ACATATGAAGATGCTTTACT+TGG 0.479773 2:+55960393 MsG0280009667.01.T01:CDS
GATTCCTCTCTCCGAGTTCG+AGG 0.480439 2:+55962321 MsG0280009667.01.T01:CDS
TCGTGTCGAGAATTTGTATG+AGG 0.481003 2:+55960869 MsG0280009667.01.T01:CDS
AGCTAGTCGAAGGCCTTAAA+CGG 0.481618 2:+55961330 MsG0280009667.01.T01:CDS
CAAGCACCTGAACATGCTCT+TGG 0.483212 2:+55962025 MsG0280009667.01.T01:CDS
GGCATAACAATCAAGTCAAC+CGG 0.483504 2:+55960021 MsG0280009667.01.T01:CDS
ATTATAGCACAAGAGGTTGC+AGG 0.486108 2:+55959955 MsG0280009667.01.T01:CDS
AAAGTGGGGTGTTAGGCCTC+TGG 0.487029 2:-55962099 None:intergenic
ATGGGACCAAATTATATCCC+TGG 0.488980 2:+55961056 MsG0280009667.01.T01:CDS
TGGACCTCAAACACAACATT+CGG 0.489336 2:+55959577 MsG0280009667.01.T01:CDS
TTTCAGATGGCGTCAAAAGA+AGG 0.489772 2:+55961824 MsG0280009667.01.T01:CDS
CAGAGAACGGTTATTTGGAT+GGG 0.491476 2:+55961110 MsG0280009667.01.T01:CDS
CGTGCAGCAGCTGGTGTCCC+GGG 0.495295 2:-55962256 None:intergenic
GGATGAACTTCGATGGATCA+TGG 0.497529 2:+55959557 MsG0280009667.01.T01:CDS
ACCCCAAGTTTCTGCAACAT+CGG 0.499302 2:-55960708 None:intergenic
TTGTGGTGGATTGTGTTGAA+GGG 0.500049 2:+55960202 MsG0280009667.01.T01:CDS
TATTGTCTGACGAGTTTGGT+TGG 0.500604 2:+55961678 MsG0280009667.01.T01:CDS
CCATCTGATCCGTTAGAACC+CGG 0.501648 2:+55962238 MsG0280009667.01.T01:CDS
AGCACAAGAGGTTGCAGGAG+AGG 0.501664 2:+55959960 MsG0280009667.01.T01:CDS
TCAGAGAACGGTTATTTGGA+TGG 0.502215 2:+55961109 MsG0280009667.01.T01:CDS
AGGACAGGCTTTCCCTCAGT+TGG 0.502488 2:+55962192 MsG0280009667.01.T01:CDS
TCGACAACGCGTGCAGCAGC+TGG 0.502752 2:-55962265 None:intergenic
TGGTGATTTGAAGAATTTCA+AGG 0.502919 2:+55960071 MsG0280009667.01.T01:CDS
GGCCGATGTTGCAGAAACTT+GGG 0.503274 2:+55960706 MsG0280009667.01.T01:CDS
TTAAAGCTTGTCCTCGAACT+CGG 0.503913 2:-55962332 None:intergenic
ATACCTCCAAGAGCATGTTC+AGG 0.504025 2:-55962031 None:intergenic
CGCAGGTTCTCATCAGCCAT+TGG 0.505155 2:-55961848 None:intergenic
TTTCGGATCGCAGAAGCATA+AGG 0.505176 2:-55960906 None:intergenic
AGTGTTCTTAATCAGAAAAG+AGG 0.506719 2:+55962058 MsG0280009667.01.T01:CDS
GCGTGTACAATTTCAGAGAC+TGG 0.510328 2:+55961377 MsG0280009667.01.T01:CDS
GTTCAGGTTTACCCTGAAAA+GGG 0.510636 2:+55960420 MsG0280009667.01.T01:CDS
TAGAACACTCTTCTAGCAGT+TGG 0.513470 2:-55961944 None:intergenic
CAAACACAACCGTTTATACA+TGG 0.517425 2:+55961568 MsG0280009667.01.T01:CDS
AACCTACCATTATCAGAGGC+AGG 0.517831 2:-55960975 None:intergenic
TGTTTCGGCCCTGAGACAAC+AGG 0.518189 2:+55961728 MsG0280009667.01.T01:CDS
ACTCTCAATGACTCTCTGAA+TGG 0.523179 2:-55960352 None:intergenic
ACAATATCTGAACGAAATCA+AGG 0.523841 2:+55961784 MsG0280009667.01.T01:CDS
CTCATAGTAGAGAGATATAC+CGG 0.524605 2:-55960040 None:intergenic
TATGCCTTAACATTGTAAAG+TGG 0.525502 2:-55962115 None:intergenic
TAAGGTTTCAACTGGTATGA+AGG 0.526566 2:+55961025 MsG0280009667.01.T01:CDS
ATGCCTTAACATTGTAAAGT+GGG 0.527635 2:-55962114 None:intergenic
AAGGGCTCAAACTGGAGGAC+AGG 0.529851 2:+55962177 MsG0280009667.01.T01:CDS
GACGAGAAATCTACGTGCCC+AGG 0.530040 2:-55960138 None:intergenic
TTTGAAAAGTGTTCAGAGAA+CGG 0.532239 2:+55961097 MsG0280009667.01.T01:CDS
GCTGGTGTCCCGGGTTCTAA+CGG 0.539672 2:-55962247 None:intergenic
TGGGACCAAATTATATCCCT+GGG 0.540597 2:+55961057 MsG0280009667.01.T01:CDS
TATTTAGCATAAGAATGGTA+AGG 0.541772 2:+55956939 None:intergenic
GGTGATTTGAAGAATTTCAA+GGG 0.542430 2:+55960072 MsG0280009667.01.T01:CDS
CAGAAGCATAAGGATCATCA+AGG 0.543054 2:-55960896 None:intergenic
CACCACAACAAGTGCTCCAT+CGG 0.543177 2:-55960187 None:intergenic
CCAAAAGGGCAGTACTAGCT+GGG 0.545036 2:-55960800 None:intergenic
GCACCTGAACATGCTCTTGG+AGG 0.547395 2:+55962028 MsG0280009667.01.T01:CDS
ACATGTGTCTACCACCATGT+TGG 0.549637 2:-55961753 None:intergenic
TCCAATCTTTCCATCATCGA+TGG 0.551387 2:-55961624 None:intergenic
ATAAACCTCATTGACTCACC+TGG 0.551454 2:+55960120 MsG0280009667.01.T01:CDS
TGATGGAAAGATTGGACCAA+GGG 0.555101 2:+55961631 MsG0280009667.01.T01:CDS
GAACATATCATAGCTGCTGC+TGG 0.558352 2:+55961401 MsG0280009667.01.T01:CDS
TGAGACAAGCACTTGGAGAA+AGG 0.559851 2:+55960250 MsG0280009667.01.T01:CDS
ACATTTGCACACTTAAAAGC+AGG 0.560298 2:-55956983 None:intergenic
TTCAAAGTTTGGAGTTGATG+AGG 0.561426 2:+55960512 MsG0280009667.01.T01:CDS
CCGGGTTCTAACGGATCAGA+TGG 0.563087 2:-55962238 None:intergenic
GCCGCACTTCGCATCACCGA+TGG 0.563718 2:+55960171 MsG0280009667.01.T01:CDS
GAAGCAAGGCCAATGGAGGA+AGG 0.566469 2:+55961590 MsG0280009667.01.T01:CDS
TCAGTTGGTATTTGACCACT+GGG 0.567021 2:+55962207 MsG0280009667.01.T01:CDS
TGAAGAATTTCAAGGGACAA+CGG 0.567896 2:+55960079 MsG0280009667.01.T01:CDS
TACACCGGCTCTAGAAGTCT+CGG 0.568080 2:-55961989 None:intergenic
AGAGAAAGAATTAACAGGAA+AGG 0.570723 2:+55960746 MsG0280009667.01.T01:CDS
AGGCGTCGATGTGTGCTTGT+TGG 0.571490 2:-55960595 None:intergenic
GTTATTGCTCATGTCGATCA+CGG 0.572642 2:+55959609 MsG0280009667.01.T01:CDS
AACTCTAACTGATTCTCTTG+TGG 0.573023 2:+55959921 MsG0280009667.01.T01:CDS
TGTTGGGACCTGTTGTCTCA+GGG 0.574468 2:-55961736 None:intergenic
TGTGGTGGATTGTGTTGAAG+GGG 0.577472 2:+55960203 MsG0280009667.01.T01:CDS
GAGCCTTGGCAGGAGAAGGA+AGG 0.579106 2:-55960839 None:intergenic
ACTTTGTATGAATGATCAGA+AGG 0.581148 2:+55960674 MsG0280009667.01.T01:CDS
GAAATTGTACACGCCACCAT+GGG 0.586057 2:-55961368 None:intergenic
ACAAAACCGCGCTTGCAAGT+AGG 0.586731 2:-55960615 None:intergenic
CACCGATGGAGCACTTGTTG+TGG 0.587643 2:+55960185 MsG0280009667.01.T01:CDS
TGCTGGCATTATAGCACAAG+AGG 0.590495 2:+55959948 MsG0280009667.01.T01:CDS
ACAAATCTTTCTTCTCCCCA+GGG 0.593450 2:-55961073 None:intergenic
CGATGGAGCACTTGTTGTGG+TGG 0.598004 2:+55960188 MsG0280009667.01.T01:CDS
GATGCCATTCACAGAGGAGG+CGG 0.598389 2:+55961911 MsG0280009667.01.T01:CDS
TCACAGTGGATGAACTTCGA+TGG 0.598635 2:+55959550 MsG0280009667.01.T01:CDS
GCTTCATCTTGATGGAGAAG+AGG 0.599491 2:+55960320 MsG0280009667.01.T01:CDS
CATCTGATCCGTTAGAACCC+GGG 0.599717 2:+55962239 MsG0280009667.01.T01:CDS
TGAGAGTGTGAACGTCGTCA+TGG 0.600651 2:+55960368 MsG0280009667.01.T01:CDS
CGTGCCCAGGTGAGTCAATG+AGG 0.603373 2:-55960125 None:intergenic
GGCGTCAAAAGAAGGTCCAA+TGG 0.608800 2:+55961832 MsG0280009667.01.T01:CDS
CCTCAAAACAGACTCCTCGC+AGG 0.608976 2:-55961865 None:intergenic
TTGTCCTCGAACTCGGAGAG+AGG 0.609982 2:-55962325 None:intergenic
AATTTCAAGGGACAACGGGA+AGG 0.612160 2:+55960084 MsG0280009667.01.T01:CDS
ACCGTTTATACATGGAAGCA+AGG 0.615097 2:+55961576 MsG0280009667.01.T01:CDS
ACTGTGCTGAGACAAGCACT+TGG 0.618952 2:+55960243 MsG0280009667.01.T01:CDS
TGGAAATACAGTTGCCATGG+TGG 0.619863 2:+55961166 MsG0280009667.01.T01:CDS
AAGCAAGGCCAATGGAGGAA+GGG 0.622121 2:+55961591 MsG0280009667.01.T01:CDS
ATTTCAAGGGACAACGGGAA+GGG 0.622453 2:+55960085 MsG0280009667.01.T01:CDS
TTCCTGCCTCTGATAATGGT+AGG 0.623278 2:+55960973 MsG0280009667.01.T01:CDS
GTTAGCAAAGTCAGATCCCA+TGG 0.623351 2:+55961352 MsG0280009667.01.T01:CDS
CATGGAAGCAAGGCCAATGG+AGG 0.625713 2:+55961586 MsG0280009667.01.T01:CDS
TGAAGCGTGTTATGCAGAGT+TGG 0.627600 2:+55960775 MsG0280009667.01.T01:CDS
GATGGGAAAGAAGCAAGAAA+CGG 0.628221 2:+55961127 MsG0280009667.01.T01:CDS
AATGGAGGAAGGGCTTGCAG+AGG 0.628970 2:+55961601 MsG0280009667.01.T01:CDS
TTGTGGAAATACAGTTGCCA+TGG 0.630029 2:+55961163 MsG0280009667.01.T01:CDS
GGAAATACAGTTGCCATGGT+GGG 0.630152 2:+55961167 MsG0280009667.01.T01:CDS
AAAGCCGAGACTTCTAGAGC+CGG 0.630186 2:+55961985 MsG0280009667.01.T01:CDS
TAAACCTCATTGACTCACCT+GGG 0.630634 2:+55960121 MsG0280009667.01.T01:CDS
GAAGCATAAGGATCATCAAG+GGG 0.632356 2:-55960894 None:intergenic
CTCTACTATGAGATGAGTGA+TGG 0.632751 2:+55960051 MsG0280009667.01.T01:CDS
ATCCGAAATTGTGATCCTGA+AGG 0.633176 2:+55960921 MsG0280009667.01.T01:CDS
ATAAAACCTACCATTATCAG+AGG 0.633905 2:-55960979 None:intergenic
GATCTTCCCAAGCTAGTCGA+AGG 0.634239 2:+55961320 MsG0280009667.01.T01:CDS
TGAAATTGTACACGCCACCA+TGG 0.634307 2:-55961369 None:intergenic
CAGTGGTCAAATACCAACTG+AGG 0.636797 2:-55962205 None:intergenic
ATACATGGAAGCAAGGCCAA+TGG 0.637147 2:+55961583 MsG0280009667.01.T01:CDS
TCGACGCCTACTTGCAAGCG+CGG 0.637454 2:+55960609 MsG0280009667.01.T01:CDS
AAGTGTAGCAGTTACATGCA+AGG 0.637524 2:+55961289 MsG0280009667.01.T01:CDS
TGCCTTAACATTGTAAAGTG+GGG 0.638897 2:-55962113 None:intergenic
CGTGTCGAGAATTTGTATGA+GGG 0.642860 2:+55960870 MsG0280009667.01.T01:CDS
GCACGTAGATTTCTCGTCAG+AGG 0.643113 2:+55960143 MsG0280009667.01.T01:CDS
ATGGTGGTAGACACATGTAA+AGG 0.643362 2:+55961758 MsG0280009667.01.T01:CDS
TGTATTTCAACCAGATACAC+CGG 0.643714 2:-55962004 None:intergenic
TCATTAAGGGCTCAAACTGG+AGG 0.645660 2:+55962172 MsG0280009667.01.T01:CDS
CTTTGTATGAATGATCAGAA+GGG 0.646175 2:+55960675 MsG0280009667.01.T01:CDS
ATGATGGAAAGATTGGACCA+AGG 0.647344 2:+55961630 MsG0280009667.01.T01:CDS
AAAGAAGCAAGAAACGGTGG+AGG 0.649502 2:+55961133 MsG0280009667.01.T01:CDS
AGAAGCATAAGGATCATCAA+GGG 0.650224 2:-55960895 None:intergenic
AGTGGTCAAATACCAACTGA+GGG 0.651860 2:-55962204 None:intergenic
GTAACTGCTACACTTCCCAC+AGG 0.651922 2:-55961281 None:intergenic
GAATTGATCCAAACCCACCA+TGG 0.653981 2:-55961180 None:intergenic
ACTTCTCAAGCACAGTCTCG+CGG 0.658713 2:-55961514 None:intergenic
ATGGCAACTGTATTTCCACA+AGG 0.662433 2:-55961161 None:intergenic
AAGATGATGAATAGGCTTTG+GGG 0.662861 2:+55960537 MsG0280009667.01.T01:CDS
ACTGATGCCATTCACAGAGG+AGG 0.665165 2:+55961908 MsG0280009667.01.T01:CDS
ATGTGTTTGACGAATTCCAG+AGG 0.667045 2:+55962083 MsG0280009667.01.T01:CDS
TCCATCGGTGATGCGAAGTG+CGG 0.671574 2:-55960172 None:intergenic
ATGATCAGAAGGGTAAGTTG+TGG 0.678564 2:+55960685 MsG0280009667.01.T01:CDS
GGGAAAGAAGCAAGAAACGG+TGG 0.682412 2:+55961130 MsG0280009667.01.T01:CDS
GTCTCGCGGAAAGAAACGAT+AGG 0.684275 2:-55961500 None:intergenic
GCCGATGTTGCAGAAACTTG+GGG 0.685450 2:+55960707 MsG0280009667.01.T01:CDS
ACGGTGGAGGATGTCCCTTG+TGG 0.687735 2:+55961146 MsG0280009667.01.T01:CDS
CGTCAAGATGAATCTGAGCG+TGG 0.688319 2:+55960000 MsG0280009667.01.T01:CDS
TGAGACAACAGGTCCCAACA+TGG 0.691555 2:+55961739 MsG0280009667.01.T01:CDS
CATACTGATGCCATTCACAG+AGG 0.719945 2:+55961905 MsG0280009667.01.T01:CDS
TGGCAACTGTATTTCCACAA+GGG 0.724072 2:-55961160 None:intergenic
AGCAAAGTCAGATCCCATGG+TGG 0.740550 2:+55961355 MsG0280009667.01.T01:CDS
AAGCATAAGGATCATCAAGG+GGG 0.743004 2:-55960893 None:intergenic
GACAACAGGTCCCAACATGG+TGG 0.748160 2:+55961742 MsG0280009667.01.T01:CDS
ATGGCTGATGAGAACCTGCG+AGG 0.750987 2:+55961851 MsG0280009667.01.T01:CDS
GGGACCAAATTATATCCCTG+GGG 0.765568 2:+55961058 MsG0280009667.01.T01:CDS
CAGATGGCAACATATCCCAG+TGG 0.782825 2:-55962222 None:intergenic
TGTGCAGGTGAAGTTCACAG+TGG 0.806356 2:+55959536 MsG0280009667.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAATAAAAATATAT+TGG - Chr2:55957255-55957274 None:intergenic 0.0%
!! AAAAAAAAAAAACTTTGAAT+AGG - Chr2:55958748-55958767 None:intergenic 10.0%
!! AAATATATGTATTAAAACAA+AGG + Chr2:55957434-55957453 MsG0280009667.01.T01:intron 10.0%
!! AATAAAAATAAAAATTGAAG+TGG - Chr2:55957197-55957216 None:intergenic 10.0%
!! AATATATGTATTAAAACAAA+GGG + Chr2:55957435-55957454 MsG0280009667.01.T01:intron 10.0%
!! ATTTACGTTATTAAAAATAA+TGG - Chr2:55958604-55958623 None:intergenic 10.0%
!! ATTTCTTCAAATAAAAAATT+GGG + Chr2:55957987-55958006 MsG0280009667.01.T01:intron 10.0%
!! CATTAATTAAACAATTAAAT+AGG + Chr2:55958685-55958704 MsG0280009667.01.T01:intron 10.0%
!! TATTTCTTCAAATAAAAAAT+TGG + Chr2:55957986-55958005 MsG0280009667.01.T01:intron 10.0%
!! TTTACTATATTTAAGAAAAA+AGG + Chr2:55958933-55958952 MsG0280009667.01.T01:intron 10.0%
!! ACTATTATACAATAAATTTC+AGG + Chr2:55957030-55957049 MsG0280009667.01.T01:intron 15.0%
!! ATATTTATAGAGAATTGTTA+AGG + Chr2:55958717-55958736 MsG0280009667.01.T01:intron 15.0%
!! TGAAATTTATTGTATAATAG+TGG - Chr2:55957031-55957050 None:intergenic 15.0%
!! TTTATTAAATAGTTCATAGA+CGG + Chr2:55958420-55958439 MsG0280009667.01.T01:intron 15.0%
!!! AATATTTTTAAACGGTTTTT+TGG - Chr2:55961662-55961681 None:intergenic 15.0%
!!! AATTATTATGAATTGTTTTG+AGG - Chr2:55957574-55957593 None:intergenic 15.0%
!!! ATATTTTTAAACGGTTTTTT+GGG - Chr2:55961661-55961680 None:intergenic 15.0%
!!! ATTATGGTTTTAGTTTTTAT+AGG + Chr2:55957530-55957549 MsG0280009667.01.T01:intron 15.0%
!!! ATTATTATGAATTGTTTTGA+GGG - Chr2:55957573-55957592 None:intergenic 15.0%
!!! GAAGCTTTATTTTTTATTTT+TGG - Chr2:55959016-55959035 None:intergenic 15.0%
!!! TATGAATATTAGTATTGTTT+TGG + Chr2:55959284-55959303 MsG0280009667.01.T01:intron 15.0%
!!! TTTTGAAAATAATTGTAGTT+CGG + Chr2:55959649-55959668 MsG0280009667.01.T01:intron 15.0%
!!! TTTTTAAGTTTTCATTTTCT+TGG - Chr2:55957653-55957672 None:intergenic 15.0%
!! AAAACATAAAAAATGAGCAT+AGG - Chr2:55959341-55959360 None:intergenic 20.0%
!! AAGAAAAAAGAAAGGTTTAA+AGG + Chr2:55962291-55962310 MsG0280009667.01.T01:CDS 20.0%
!! AATTGAAATGATTCAATAAC+AGG - Chr2:55962145-55962164 None:intergenic 20.0%
!! AGACAAATAATATAAGTGTT+AGG + Chr2:55957220-55957239 MsG0280009667.01.T01:intron 20.0%
!! GTTATATTTCAAACAACAAA+AGG - Chr2:55959258-55959277 None:intergenic 20.0%
!! TCAATTCAATGAATCATTAA+GGG + Chr2:55962159-55962178 MsG0280009667.01.T01:CDS 20.0%
!! TTATAGGTAAATACACAATT+TGG + Chr2:55957546-55957565 MsG0280009667.01.T01:intron 20.0%
!! TTCAATTCAATGAATCATTA+AGG + Chr2:55962158-55962177 MsG0280009667.01.T01:CDS 20.0%
!! TTGAAGAAATAAGCATAATT+TGG - Chr2:55957977-55957996 None:intergenic 20.0%
!!! ATACTATTCATTTTCCTTAA+AGG + Chr2:55959486-55959505 MsG0280009667.01.T01:intron 20.0%
!!! ATTTTGTTAACTGTTAAAAC+GGG - Chr2:55960282-55960301 None:intergenic 20.0%
!!! CAATTATTTTCAAAAGATCT+AGG - Chr2:55959644-55959663 None:intergenic 20.0%
!!! CATTTTGTTAACTGTTAAAA+CGG - Chr2:55960283-55960302 None:intergenic 20.0%
!!! TGTTTCAGTTTTTATTTTCT+TGG - Chr2:55957628-55957647 None:intergenic 20.0%
!!! TTGACTTCTTTTTTTTTTAC+TGG + Chr2:55958347-55958366 MsG0280009667.01.T01:intron 20.0%
! AAAAATCATCATCTCCAAAA+GGG - Chr2:55960817-55960836 None:intergenic 25.0%
! AAAAATGTCTGTTGAGTAAT+TGG - Chr2:55959104-55959123 None:intergenic 25.0%
! AAAGCTATGAAAATTTCTCA+AGG - Chr2:55958322-55958341 None:intergenic 25.0%
! AAGATATTGCCAAAAAAGTA+TGG + Chr2:55961705-55961724 MsG0280009667.01.T01:CDS 25.0%
! AGAATTGAGATAATTTGACT+TGG - Chr2:55959039-55959058 None:intergenic 25.0%
! ATCTGCATGTTATATTTCAT+TGG - Chr2:55957512-55957531 None:intergenic 25.0%
! ATGACAAATGAACTTACTTA+AGG + Chr2:55957948-55957967 MsG0280009667.01.T01:intron 25.0%
! CAAATTCTGTTTCATTCAAT+TGG + Chr2:55959843-55959862 MsG0280009667.01.T01:intron 25.0%
! GAAATATAACATGCAGATTA+TGG + Chr2:55957514-55957533 MsG0280009667.01.T01:intron 25.0%
! TAGTTGAGATTTATGTGAAA+TGG - Chr2:55958540-55958559 None:intergenic 25.0%
! TATATAATGTACAATTGTGC+AGG + Chr2:55959521-55959540 MsG0280009667.01.T01:intron 25.0%
! TATTGACAAGTTTACCTTTA+AGG - Chr2:55959503-55959522 None:intergenic 25.0%
! TCTGCATGTTATATTTCATT+GGG - Chr2:55957511-55957530 None:intergenic 25.0%
! TTAACAGACTAAAACTAACA+GGG - Chr2:55958180-55958199 None:intergenic 25.0%
!! ATTTGTTAAAGTAGCATTCT+TGG - Chr2:55961210-55961229 None:intergenic 25.0%
!! GAATTGAGATAATTTGACTT+GGG - Chr2:55959038-55959057 None:intergenic 25.0%
!!! AAAACTTCATAGCTCTAATA+GGG - Chr2:55961253-55961272 None:intergenic 25.0%
!!! CAACAGACATTTTTTTTTGA+CGG + Chr2:55959110-55959129 MsG0280009667.01.T01:intron 25.0%
!!! CGTCAGACAATATTTTTAAA+CGG - Chr2:55961670-55961689 None:intergenic 25.0%
!!! CGTTTTAACAGTTAACAAAA+TGG + Chr2:55960281-55960300 MsG0280009667.01.T01:CDS 25.0%
AAAATATTGTCTGACGAGTT+TGG + Chr2:55961674-55961693 MsG0280009667.01.T01:CDS 30.0%
AAGACAACCAAAATTACATG+TGG - Chr2:55958293-55958312 None:intergenic 30.0%
AAGATGTATGCTTCAAAGTT+TGG + Chr2:55960501-55960520 MsG0280009667.01.T01:CDS 30.0%
ACAATATCTGAACGAAATCA+AGG + Chr2:55961784-55961803 MsG0280009667.01.T01:CDS 30.0%
ACATATGAAGATGCTTTACT+TGG + Chr2:55960393-55960412 MsG0280009667.01.T01:CDS 30.0%
ACTTTGTATGAATGATCAGA+AGG + Chr2:55960674-55960693 MsG0280009667.01.T01:CDS 30.0%
AGACAACCAAAATTACATGT+GGG - Chr2:55958292-55958311 None:intergenic 30.0%
AGAGAAAGAATTAACAGGAA+AGG + Chr2:55960746-55960765 MsG0280009667.01.T01:CDS 30.0%
AGTGTTCTTAATCAGAAAAG+AGG + Chr2:55962058-55962077 MsG0280009667.01.T01:CDS 30.0%
AGTTCAATAATCTGCTTGAT+TGG - Chr2:55960657-55960676 None:intergenic 30.0%
ATAAAACCTACCATTATCAG+AGG - Chr2:55960982-55961001 None:intergenic 30.0%
ATGCCTTAACATTGTAAAGT+GGG - Chr2:55962117-55962136 None:intergenic 30.0%
CACATTCCAATATTGTTGAA+AGG + Chr2:55957303-55957322 MsG0280009667.01.T01:intron 30.0%
CTTTGTATGAATGATCAGAA+GGG + Chr2:55960675-55960694 MsG0280009667.01.T01:CDS 30.0%
GAAAAATCATCATCTCCAAA+AGG - Chr2:55960818-55960837 None:intergenic 30.0%
GGTGATTTGAAGAATTTCAA+GGG + Chr2:55960072-55960091 MsG0280009667.01.T01:CDS 30.0%
GTCGAGATAAGAAAAAAGAA+AGG + Chr2:55962283-55962302 MsG0280009667.01.T01:CDS 30.0%
GTTAACAGACTAAAACTAAC+AGG - Chr2:55958181-55958200 None:intergenic 30.0%
TAAAAATTGAAGTGGAGAGA+TGG - Chr2:55957189-55957208 None:intergenic 30.0%
TAGTCCTATGTTATCACTTA+GGG + Chr2:55957355-55957374 MsG0280009667.01.T01:intron 30.0%
TATAAACGGTTGTGTTTGTT+TGG - Chr2:55961566-55961585 None:intergenic 30.0%
TATGCCTTAACATTGTAAAG+TGG - Chr2:55962118-55962137 None:intergenic 30.0%
TCAGAAGAGAAAGAATTAAC+AGG + Chr2:55960741-55960760 MsG0280009667.01.T01:CDS 30.0%
TGAGATTTATGTGAAATGGA+CGG - Chr2:55958536-55958555 None:intergenic 30.0%
TGGTGATTTGAAGAATTTCA+AGG + Chr2:55960071-55960090 MsG0280009667.01.T01:CDS 30.0%
TTTGAATTAACTGCCTCATT+TGG + Chr2:55957094-55957113 MsG0280009667.01.T01:intron 30.0%
! AAATCTCCCACATGTAATTT+TGG + Chr2:55958283-55958302 MsG0280009667.01.T01:intron 30.0%
! TGATTTAGTTTCTTGAATGC+AGG + Chr2:55959892-55959911 MsG0280009667.01.T01:intron 30.0%
!! AATGGTAGGTTTTATGCTTT+CGG + Chr2:55960987-55961006 MsG0280009667.01.T01:CDS 30.0%
!! AGTTCTAGCTCATTTCAATT+TGG - Chr2:55958254-55958273 None:intergenic 30.0%
!! GAAAACTTCATAGCTCTAAT+AGG - Chr2:55961254-55961273 None:intergenic 30.0%
!! TTTGAAAAGTGTTCAGAGAA+CGG + Chr2:55961097-55961116 MsG0280009667.01.T01:CDS 30.0%
!!! GTTGTCTCTATTTTTGGATT+TGG + Chr2:55957144-55957163 MsG0280009667.01.T01:intron 30.0%
AAGATGATGAATAGGCTTTG+GGG + Chr2:55960537-55960556 MsG0280009667.01.T01:CDS 35.0%
ACATTTGCACACTTAAAAGC+AGG - Chr2:55956986-55957005 None:intergenic 35.0%
AGAAGATGATGAATAGGCTT+TGG + Chr2:55960535-55960554 MsG0280009667.01.T01:CDS 35.0%
AGCATACATCTTAGCAAAGT+TGG - Chr2:55960493-55960512 None:intergenic 35.0%
AGGAATAAAACCTGTCAAGA+TGG + Chr2:55959383-55959402 MsG0280009667.01.T01:intron 35.0%
ATGAGGAGAAGATGATGAAT+AGG + Chr2:55960529-55960548 MsG0280009667.01.T01:CDS 35.0%
CAAACACAACCGTTTATACA+TGG + Chr2:55961568-55961587 MsG0280009667.01.T01:CDS 35.0%
CATTCCCTAAGTGATAACAT+AGG - Chr2:55957362-55957381 None:intergenic 35.0%
CTAGTCCTATGTTATCACTT+AGG + Chr2:55957354-55957373 MsG0280009667.01.T01:intron 35.0%
CTCATAGTAGAGAGATATAC+CGG - Chr2:55960043-55960062 None:intergenic 35.0%
GAAGATGATGAATAGGCTTT+GGG + Chr2:55960536-55960555 MsG0280009667.01.T01:CDS 35.0%
GGCTTATAAAGACACAAGAA+GGG + Chr2:55958042-55958061 MsG0280009667.01.T01:intron 35.0%
GGTATGAAGGTCAGAATTAT+GGG + Chr2:55961038-55961057 MsG0280009667.01.T01:CDS 35.0%
GTCTCATAAGTTGTCTCAAA+GGG - Chr2:55957397-55957416 None:intergenic 35.0%
GTGAGTCAATGAGGTTTATA+AGG - Chr2:55960119-55960138 None:intergenic 35.0%
TAAGGTTTCAACTGGTATGA+AGG + Chr2:55961025-55961044 MsG0280009667.01.T01:CDS 35.0%
TATTCCGAATGTTGTGTTTG+AGG - Chr2:55959584-55959603 None:intergenic 35.0%
TCAACTATGAAGTGTGTCTT+GGG + Chr2:55958553-55958572 MsG0280009667.01.T01:intron 35.0%
TCCAAGCCTTTCAACAATAT+TGG - Chr2:55957312-55957331 None:intergenic 35.0%
TCCAATATTGTTGAAAGGCT+TGG + Chr2:55957308-55957327 MsG0280009667.01.T01:intron 35.0%
TGAAGAATTTCAAGGGACAA+CGG + Chr2:55960079-55960098 MsG0280009667.01.T01:CDS 35.0%
TGCCTTAACATTGTAAAGTG+GGG - Chr2:55962116-55962135 None:intergenic 35.0%
TGGTATGAAGGTCAGAATTA+TGG + Chr2:55961037-55961056 MsG0280009667.01.T01:CDS 35.0%
TGTATTTCAACCAGATACAC+CGG - Chr2:55962007-55962026 None:intergenic 35.0%
TGTCTCATAAGTTGTCTCAA+AGG - Chr2:55957398-55957417 None:intergenic 35.0%
TGTGACGTCTCAAACTATAA+GGG - Chr2:55958376-55958395 None:intergenic 35.0%
TTGACTCTTCTACCAAAAAG+TGG + Chr2:55960571-55960590 MsG0280009667.01.T01:CDS 35.0%
TTGCAGGATGATTTCATGAA+TGG + Chr2:55961455-55961474 MsG0280009667.01.T01:CDS 35.0%
TTTCTTGAGCTTCATCTTGA+TGG + Chr2:55960312-55960331 MsG0280009667.01.T01:CDS 35.0%
! AAAGAAACTGTTCCCTTTTC+AGG - Chr2:55960435-55960454 None:intergenic 35.0%
! AACTCTAACTGATTCTCTTG+TGG + Chr2:55959921-55959940 MsG0280009667.01.T01:CDS 35.0%
! AAGAAACTGTTCCCTTTTCA+GGG - Chr2:55960434-55960453 None:intergenic 35.0%
! AGAAGCATAAGGATCATCAA+GGG - Chr2:55960898-55960917 None:intergenic 35.0%
! GCCAAAAAAGTATGGTGTTT+CGG + Chr2:55961713-55961732 MsG0280009667.01.T01:CDS 35.0%
! TTCAGTTCGTAACTTGCAAA+TGG - Chr2:55958086-55958105 None:intergenic 35.0%
!! ACTTTTGGCTGCATGTAATA+TGG - Chr2:55958225-55958244 None:intergenic 35.0%
!! TTCAAAGTTTGGAGTTGATG+AGG + Chr2:55960512-55960531 MsG0280009667.01.T01:CDS 35.0%
!!! TCTTTTTCAGCTGGTTTACA+TGG + Chr2:55960450-55960469 MsG0280009667.01.T01:CDS 35.0%
!!! TTTTCAGGTAAGGTTTCAAC+TGG + Chr2:55961017-55961036 MsG0280009667.01.T01:CDS 35.0%
AAGCATAAGGATCATCAAGG+GGG - Chr2:55960896-55960915 None:intergenic 40.0%
AAGTGTAGCAGTTACATGCA+AGG + Chr2:55961289-55961308 MsG0280009667.01.T01:CDS 40.0%
AATCTGCTTGAAGGATTTGC+AGG + Chr2:55961439-55961458 MsG0280009667.01.T01:CDS 40.0%
ACAAATCTTTCTTCTCCCCA+GGG - Chr2:55961076-55961095 None:intergenic 40.0%
ACCGTTTATACATGGAAGCA+AGG + Chr2:55961576-55961595 MsG0280009667.01.T01:CDS 40.0%
ACTCTCAATGACTCTCTGAA+TGG - Chr2:55960355-55960374 None:intergenic 40.0%
AGAGATGGAGAACATTAGTG+AGG - Chr2:55957174-55957193 None:intergenic 40.0%
AGTGGTCAAATACCAACTGA+GGG - Chr2:55962207-55962226 None:intergenic 40.0%
ATCCATCCAAGGAAGTTTCT+TGG - Chr2:55958986-55959005 None:intergenic 40.0%
ATCCGAAATTGTGATCCTGA+AGG + Chr2:55960921-55960940 MsG0280009667.01.T01:CDS 40.0%
ATGATCAGAAGGGTAAGTTG+TGG + Chr2:55960685-55960704 MsG0280009667.01.T01:CDS 40.0%
ATGATTCCTGCCTCTGATAA+TGG + Chr2:55960969-55960988 MsG0280009667.01.T01:CDS 40.0%
ATGGCAACTGTATTTCCACA+AGG - Chr2:55961164-55961183 None:intergenic 40.0%
ATGGGACCAAATTATATCCC+TGG + Chr2:55961056-55961075 MsG0280009667.01.T01:CDS 40.0%
ATGGTGGTAGACACATGTAA+AGG + Chr2:55961758-55961777 MsG0280009667.01.T01:CDS 40.0%
ATGTGTTTGACGAATTCCAG+AGG + Chr2:55962083-55962102 MsG0280009667.01.T01:CDS 40.0%
ATTACATGCAGCCAAAAGTC+AGG + Chr2:55958226-55958245 MsG0280009667.01.T01:intron 40.0%
ATTATAGCACAAGAGGTTGC+AGG + Chr2:55959955-55959974 MsG0280009667.01.T01:CDS 40.0%
ATTGGGTAGACACATGCAAT+TGG - Chr2:55957494-55957513 None:intergenic 40.0%
ATTGTCTGACGAGTTTGGTT+GGG + Chr2:55961679-55961698 MsG0280009667.01.T01:CDS 40.0%
CACCCCACTTTACAATGTTA+AGG + Chr2:55962111-55962130 MsG0280009667.01.T01:CDS 40.0%
CAGAGAACGGTTATTTGGAT+GGG + Chr2:55961110-55961129 MsG0280009667.01.T01:CDS 40.0%
CGTGTCGAGAATTTGTATGA+GGG + Chr2:55960870-55960889 MsG0280009667.01.T01:CDS 40.0%
CTCAACTATGAAGTGTGTCT+TGG + Chr2:55958552-55958571 MsG0280009667.01.T01:intron 40.0%
CTCTACTATGAGATGAGTGA+TGG + Chr2:55960051-55960070 MsG0280009667.01.T01:CDS 40.0%
CTGACTTTGCTAACCGTTTA+AGG - Chr2:55961346-55961365 None:intergenic 40.0%
GAAGAATTTCAAGGGACAAC+GGG + Chr2:55960080-55960099 MsG0280009667.01.T01:CDS 40.0%
GAAGCATAAGGATCATCAAG+GGG - Chr2:55960897-55960916 None:intergenic 40.0%
GAATCATTAAGGGCTCAAAC+TGG + Chr2:55962169-55962188 MsG0280009667.01.T01:CDS 40.0%
GATGGGAAAGAAGCAAGAAA+CGG + Chr2:55961127-55961146 MsG0280009667.01.T01:CDS 40.0%
GCAATGCTCTCATTTGAAAG+GGG + Chr2:55957116-55957135 MsG0280009667.01.T01:intron 40.0%
GCATCTTGAAATCTGCTTGA+AGG + Chr2:55961430-55961449 MsG0280009667.01.T01:CDS 40.0%
GCCTTGCTTCCATGTATAAA+CGG - Chr2:55961580-55961599 None:intergenic 40.0%
GGCAATGCTCTCATTTGAAA+GGG + Chr2:55957115-55957134 MsG0280009667.01.T01:intron 40.0%
GGCATAACAATCAAGTCAAC+CGG + Chr2:55960021-55960040 MsG0280009667.01.T01:CDS 40.0%
GGGCTTATAAAGACACAAGA+AGG + Chr2:55958041-55958060 MsG0280009667.01.T01:intron 40.0%
GTCCTTCAGGATCACAATTT+CGG - Chr2:55960926-55960945 None:intergenic 40.0%
GTGACGTCTCAAACTATAAG+GGG - Chr2:55958375-55958394 None:intergenic 40.0%
GTGTGACGTCTCAAACTATA+AGG - Chr2:55958377-55958396 None:intergenic 40.0%
GTGTTCAGAGAACGGTTATT+TGG + Chr2:55961105-55961124 MsG0280009667.01.T01:CDS 40.0%
GTTATTGCTCATGTCGATCA+CGG + Chr2:55959609-55959628 MsG0280009667.01.T01:CDS 40.0%
TACAAATCTTTCTTCTCCCC+AGG - Chr2:55961077-55961096 None:intergenic 40.0%
TAGAACACTCTTCTAGCAGT+TGG - Chr2:55961947-55961966 None:intergenic 40.0%
TATTGTCTGACGAGTTTGGT+TGG + Chr2:55961678-55961697 MsG0280009667.01.T01:CDS 40.0%
TCAGAGAACGGTTATTTGGA+TGG + Chr2:55961109-55961128 MsG0280009667.01.T01:CDS 40.0%
TCCAATCTTTCCATCATCGA+TGG - Chr2:55961627-55961646 None:intergenic 40.0%
TCGTGTCGAGAATTTGTATG+AGG + Chr2:55960869-55960888 MsG0280009667.01.T01:CDS 40.0%
TGATGGAAAGATTGGACCAA+GGG + Chr2:55961631-55961650 MsG0280009667.01.T01:CDS 40.0%
TGCATGTAATATGGCTTGAG+TGG - Chr2:55958216-55958235 None:intergenic 40.0%
TGGACCTCAAACACAACATT+CGG + Chr2:55959577-55959596 MsG0280009667.01.T01:CDS 40.0%
TGGCAACTGTATTTCCACAA+GGG - Chr2:55961163-55961182 None:intergenic 40.0%
TGGCAATGCTCTCATTTGAA+AGG + Chr2:55957114-55957133 MsG0280009667.01.T01:intron 40.0%
TGGGACCAAATTATATCCCT+GGG + Chr2:55961057-55961076 MsG0280009667.01.T01:CDS 40.0%
TTAAAGCTTGTCCTCGAACT+CGG - Chr2:55962335-55962354 None:intergenic 40.0%
TTACATGCAGCCAAAAGTCA+GGG + Chr2:55958227-55958246 MsG0280009667.01.T01:intron 40.0%
TTCTAGCAGTTGGAATGATC+TGG - Chr2:55961937-55961956 None:intergenic 40.0%
TTCTCCCCAGGGATATAATT+TGG - Chr2:55961065-55961084 None:intergenic 40.0%
TTGGGAAAAGTAACAACGTG+TGG + Chr2:55958571-55958590 MsG0280009667.01.T01:intron 40.0%
TTGTGGAAATACAGTTGCCA+TGG + Chr2:55961163-55961182 MsG0280009667.01.T01:CDS 40.0%
TTTCAGATGGCGTCAAAAGA+AGG + Chr2:55961824-55961843 MsG0280009667.01.T01:CDS 40.0%
! AAGTTTTCAGTGTCACCTGT+GGG + Chr2:55961266-55961285 MsG0280009667.01.T01:CDS 40.0%
! ACATTGTAAAGTGGGGTGTT+AGG - Chr2:55962109-55962128 None:intergenic 40.0%
! ATGATGGAAAGATTGGACCA+AGG + Chr2:55961630-55961649 MsG0280009667.01.T01:CDS 40.0%
! CAGAAGCATAAGGATCATCA+AGG - Chr2:55960899-55960918 None:intergenic 40.0%
! GCTGTGGTTGTCTCTATTTT+TGG + Chr2:55957138-55957157 MsG0280009667.01.T01:intron 40.0%
! GTTCAGGTTTACCCTGAAAA+GGG + Chr2:55960420-55960439 MsG0280009667.01.T01:CDS 40.0%
! TACGAACTGAACTGCTACTT+TGG + Chr2:55958095-55958114 MsG0280009667.01.T01:intron 40.0%
! TCAATTTGGTCCCTGACTTT+TGG - Chr2:55958240-55958259 None:intergenic 40.0%
! TCAGTTGGTATTTGACCACT+GGG + Chr2:55962207-55962226 MsG0280009667.01.T01:CDS 40.0%
! TGTCGTTACAGGTTTTCAGA+TGG + Chr2:55961811-55961830 MsG0280009667.01.T01:CDS 40.0%
! TGTTCAGGTTTACCCTGAAA+AGG + Chr2:55960419-55960438 MsG0280009667.01.T01:CDS 40.0%
! TTTCAGCTGGTTTACATGGA+TGG + Chr2:55960454-55960473 MsG0280009667.01.T01:CDS 40.0%
!! AATGAGAGCATTGCCAAATG+AGG - Chr2:55957110-55957129 None:intergenic 40.0%
!! ACGAACTGAACTGCTACTTT+GGG + Chr2:55958096-55958115 MsG0280009667.01.T01:intron 40.0%
!! ATAAACCTCATTGACTCACC+TGG + Chr2:55960120-55960139 MsG0280009667.01.T01:CDS 40.0%
!! CATAGGACTAGTTGTCATCA+CGG - Chr2:55957345-55957364 None:intergenic 40.0%
!! TAAACCTCATTGACTCACCT+GGG + Chr2:55960121-55960140 MsG0280009667.01.T01:CDS 40.0%
!! TGCTTTACTTGGTGATGTTC+AGG + Chr2:55960404-55960423 MsG0280009667.01.T01:CDS 40.0%
!! TTGTGGTGGATTGTGTTGAA+GGG + Chr2:55960202-55960221 MsG0280009667.01.T01:CDS 40.0%
!!! GCCGAAACACCATACTTTTT+TGG - Chr2:55961717-55961736 None:intergenic 40.0%
!!! GGAACAGTTTCTTTTTCAGC+TGG + Chr2:55960441-55960460 MsG0280009667.01.T01:CDS 40.0%
AAAGAAGCAAGAAACGGTGG+AGG + Chr2:55961133-55961152 MsG0280009667.01.T01:CDS 45.0%
AACCTACCATTATCAGAGGC+AGG - Chr2:55960978-55960997 None:intergenic 45.0%
AATTTCAAGGGACAACGGGA+AGG + Chr2:55960084-55960103 MsG0280009667.01.T01:CDS 45.0%
ACAGACACTTGACAAGTACG+AGG - Chr2:55959220-55959239 None:intergenic 45.0%
ACATGTGTCTACCACCATGT+TGG - Chr2:55961756-55961775 None:intergenic 45.0%
ACCACACATTTGCTCTCGAA+GGG + Chr2:55958021-55958040 MsG0280009667.01.T01:intron 45.0%
ACCCCAAGTTTCTGCAACAT+CGG - Chr2:55960711-55960730 None:intergenic 45.0%
AGCACTCCAAGAAACTTCCT+TGG + Chr2:55958977-55958996 MsG0280009667.01.T01:intron 45.0%
AGCTAGTCGAAGGCCTTAAA+CGG + Chr2:55961330-55961349 MsG0280009667.01.T01:CDS 45.0%
ATACATGGAAGCAAGGCCAA+TGG + Chr2:55961583-55961602 MsG0280009667.01.T01:CDS 45.0%
ATCAAGGACTCTGTCGTTAC+AGG + Chr2:55961800-55961819 MsG0280009667.01.T01:CDS 45.0%
ATTTCAAGGGACAACGGGAA+GGG + Chr2:55960085-55960104 MsG0280009667.01.T01:CDS 45.0%
CACTTAAAAGCAGGCAACTC+AGG - Chr2:55956977-55956996 None:intergenic 45.0%
CAGTGGTCAAATACCAACTG+AGG - Chr2:55962208-55962227 None:intergenic 45.0%
CATACTGATGCCATTCACAG+AGG + Chr2:55961905-55961924 MsG0280009667.01.T01:CDS 45.0%
CATGTGTCTACCACCATGTT+GGG - Chr2:55961755-55961774 None:intergenic 45.0%
CTCCAAGAAACTTCCTTGGA+TGG + Chr2:55958981-55959000 MsG0280009667.01.T01:intron 45.0%
GAAATTGTACACGCCACCAT+GGG - Chr2:55961371-55961390 None:intergenic 45.0%
GAACATATCATAGCTGCTGC+TGG + Chr2:55961401-55961420 MsG0280009667.01.T01:CDS 45.0%
GAATTGATCCAAACCCACCA+TGG - Chr2:55961183-55961202 None:intergenic 45.0%
GCGTGTACAATTTCAGAGAC+TGG + Chr2:55961377-55961396 MsG0280009667.01.T01:CDS 45.0%
GCTTCATCTTGATGGAGAAG+AGG + Chr2:55960320-55960339 MsG0280009667.01.T01:CDS 45.0%
GGAAATACAGTTGCCATGGT+GGG + Chr2:55961167-55961186 MsG0280009667.01.T01:CDS 45.0%
GGATGAACTTCGATGGATCA+TGG + Chr2:55959557-55959576 MsG0280009667.01.T01:CDS 45.0%
GGGACCAAATTATATCCCTG+GGG + Chr2:55961058-55961077 MsG0280009667.01.T01:CDS 45.0%
GTTAGCAAAGTCAGATCCCA+TGG + Chr2:55961352-55961371 MsG0280009667.01.T01:CDS 45.0%
TCACAGTGGATGAACTTCGA+TGG + Chr2:55959550-55959569 MsG0280009667.01.T01:CDS 45.0%
TCATTAAGGGCTCAAACTGG+AGG + Chr2:55962172-55962191 MsG0280009667.01.T01:CDS 45.0%
TCGTACTTGTCAAGTGTCTG+TGG + Chr2:55959219-55959238 MsG0280009667.01.T01:intron 45.0%
TGAAATTGTACACGCCACCA+TGG - Chr2:55961372-55961391 None:intergenic 45.0%
TGAAGCGTGTTATGCAGAGT+TGG + Chr2:55960775-55960794 MsG0280009667.01.T01:CDS 45.0%
TGAGACAAGCACTTGGAGAA+AGG + Chr2:55960250-55960269 MsG0280009667.01.T01:CDS 45.0%
TGCTGGCATTATAGCACAAG+AGG + Chr2:55959948-55959967 MsG0280009667.01.T01:CDS 45.0%
TGGAAATACAGTTGCCATGG+TGG + Chr2:55961166-55961185 MsG0280009667.01.T01:CDS 45.0%
TGTCAACTCACCATCTTGAC+AGG - Chr2:55959396-55959415 None:intergenic 45.0%
TTGGTAGAGTGATCCATCCA+AGG - Chr2:55958997-55959016 None:intergenic 45.0%
! ATACCTCCAAGAGCATGTTC+AGG - Chr2:55962034-55962053 None:intergenic 45.0%
! CAGTCAAGCTCTTGTTTGCA+AGG + Chr2:55959363-55959382 MsG0280009667.01.T01:intron 45.0%
! CTCAGTTGGTATTTGACCAC+TGG + Chr2:55962206-55962225 MsG0280009667.01.T01:CDS 45.0%
! GAAGTTTTCAGTGTCACCTG+TGG + Chr2:55961265-55961284 MsG0280009667.01.T01:CDS 45.0%
! GACACGATACTTTTGAGCCT+TGG - Chr2:55960856-55960875 None:intergenic 45.0%
! GTCAAGATGGTGAGTTGACA+AGG + Chr2:55959396-55959415 MsG0280009667.01.T01:intron 45.0%
! TTTAAGGCCTTCGACTAGCT+TGG - Chr2:55961330-55961349 None:intergenic 45.0%
! TTTCGGATCGCAGAAGCATA+AGG - Chr2:55960909-55960928 None:intergenic 45.0%
!! CGAACTGAACTGCTACTTTG+GGG + Chr2:55958097-55958116 MsG0280009667.01.T01:intron 45.0%
!! GCCATCGATGATGGAAAGAT+TGG + Chr2:55961623-55961642 MsG0280009667.01.T01:CDS 45.0%
!! GTGACTTGCTCATCACAGTA+TGG - Chr2:55961544-55961563 None:intergenic 45.0%
!! GTGCTTGTTGGTCCACTTTT+TGG - Chr2:55960586-55960605 None:intergenic 45.0%
!! GTTGTGGTGGATTGTGTTGA+AGG + Chr2:55960201-55960220 MsG0280009667.01.T01:CDS 45.0%
!! TGTGGTGGATTGTGTTGAAG+GGG + Chr2:55960203-55960222 MsG0280009667.01.T01:CDS 45.0%
!! TTAAGGCCTTCGACTAGCTT+GGG - Chr2:55961329-55961348 None:intergenic 45.0%
!! TTCCTGCCTCTGATAATGGT+AGG + Chr2:55960973-55960992 MsG0280009667.01.T01:CDS 45.0%
!!! ATATATTTATTTGTATATTT+TGG - Chr2:55957422-55957441 None:intergenic 5.0%
AAGAGGTTGCAGGAGAGGTT+AGG + Chr2:55959965-55959984 MsG0280009667.01.T01:CDS 50.0%
AAGCAAGGCCAATGGAGGAA+GGG + Chr2:55961591-55961610 MsG0280009667.01.T01:CDS 50.0%
ACAAAACCGCGCTTGCAAGT+AGG - Chr2:55960618-55960637 None:intergenic 50.0%
ACTGATGCCATTCACAGAGG+AGG + Chr2:55961908-55961927 MsG0280009667.01.T01:CDS 50.0%
ACTGTGCTGAGACAAGCACT+TGG + Chr2:55960243-55960262 MsG0280009667.01.T01:CDS 50.0%
ACTTCTCAAGCACAGTCTCG+CGG - Chr2:55961517-55961536 None:intergenic 50.0%
AGCAAAGTCAGATCCCATGG+TGG + Chr2:55961355-55961374 MsG0280009667.01.T01:CDS 50.0%
ATGTTGGGACCTGTTGTCTC+AGG - Chr2:55961740-55961759 None:intergenic 50.0%
CAAGCACCTGAACATGCTCT+TGG + Chr2:55962025-55962044 MsG0280009667.01.T01:CDS 50.0%
CACCACAACAAGTGCTCCAT+CGG - Chr2:55960190-55960209 None:intergenic 50.0%
CACCACACATTTGCTCTCGA+AGG + Chr2:55958020-55958039 MsG0280009667.01.T01:intron 50.0%
CAGATGGCAACATATCCCAG+TGG - Chr2:55962225-55962244 None:intergenic 50.0%
CATCTGATCCGTTAGAACCC+GGG + Chr2:55962239-55962258 MsG0280009667.01.T01:CDS 50.0%
CCAAAAGGGCAGTACTAGCT+GGG - Chr2:55960803-55960822 None:intergenic 50.0%
CCATCTGATCCGTTAGAACC+CGG + Chr2:55962238-55962257 MsG0280009667.01.T01:CDS 50.0%
CGTCAAGATGAATCTGAGCG+TGG + Chr2:55960000-55960019 MsG0280009667.01.T01:CDS 50.0%
CTCTCATTTGAAAGGGGCTG+TGG + Chr2:55957122-55957141 MsG0280009667.01.T01:intron 50.0%
CTTCGAGAGCAAATGTGTGG+TGG - Chr2:55958022-55958041 None:intergenic 50.0%
GAGCAAATGTGTGGTGGCTT+TGG - Chr2:55958016-55958035 None:intergenic 50.0%
GATCTTCCCAAGCTAGTCGA+AGG + Chr2:55961320-55961339 MsG0280009667.01.T01:CDS 50.0%
GCACGTAGATTTCTCGTCAG+AGG + Chr2:55960143-55960162 MsG0280009667.01.T01:CDS 50.0%
GCCGATGTTGCAGAAACTTG+GGG + Chr2:55960707-55960726 MsG0280009667.01.T01:CDS 50.0%
GGCCGATGTTGCAGAAACTT+GGG + Chr2:55960706-55960725 MsG0280009667.01.T01:CDS 50.0%
GGCGTCAAAAGAAGGTCCAA+TGG + Chr2:55961832-55961851 MsG0280009667.01.T01:CDS 50.0%
GGGAAAGAAGCAAGAAACGG+TGG + Chr2:55961130-55961149 MsG0280009667.01.T01:CDS 50.0%
GTAACTGCTACACTTCCCAC+AGG - Chr2:55961284-55961303 None:intergenic 50.0%
GTCTCGCGGAAAGAAACGAT+AGG - Chr2:55961503-55961522 None:intergenic 50.0%
GTTGAAAGGCTTGGACTGCA+AGG + Chr2:55957317-55957336 MsG0280009667.01.T01:intron 50.0%
TCCAAAAGGGCAGTACTAGC+TGG - Chr2:55960804-55960823 None:intergenic 50.0%
TGAGACAACAGGTCCCAACA+TGG + Chr2:55961739-55961758 MsG0280009667.01.T01:CDS 50.0%
TGCTCATGTCGATCACGGTA+TGG + Chr2:55959614-55959633 MsG0280009667.01.T01:intron 50.0%
TGGCCGATGTTGCAGAAACT+TGG + Chr2:55960705-55960724 MsG0280009667.01.T01:CDS 50.0%
TGTGCAGGTGAAGTTCACAG+TGG + Chr2:55959536-55959555 MsG0280009667.01.T01:intron 50.0%
TGTTGGGACCTGTTGTCTCA+GGG - Chr2:55961739-55961758 None:intergenic 50.0%
! CGATACTTTTGAGCCTTGGC+AGG - Chr2:55960852-55960871 None:intergenic 50.0%
! GCTTTCGGTCGTGTGTTTTC+AGG + Chr2:55961002-55961021 MsG0280009667.01.T01:CDS 50.0%
! TGAGAGTGTGAACGTCGTCA+TGG + Chr2:55960368-55960387 MsG0280009667.01.T01:CDS 50.0%
! TTTTGAGCCTTGGCAGGAGA+AGG - Chr2:55960846-55960865 None:intergenic 50.0%
!! AAAGCCGAGACTTCTAGAGC+CGG + Chr2:55961985-55962004 MsG0280009667.01.T01:CDS 50.0%
!! ACTTCTAGAGCCGGTGTATC+TGG + Chr2:55961994-55962013 MsG0280009667.01.T01:CDS 50.0%
!! TACACCGGCTCTAGAAGTCT+CGG - Chr2:55961992-55962011 None:intergenic 50.0%
!! TACAGTTGCCATGGTGGGTT+TGG + Chr2:55961172-55961191 MsG0280009667.01.T01:CDS 50.0%
!!! CGGTCGTGTGTTTTCAGGTA+AGG + Chr2:55961007-55961026 MsG0280009667.01.T01:CDS 50.0%
!!! CGGTTTTTTGGGTCATCCCT+TGG - Chr2:55961650-55961669 None:intergenic 50.0%
AAGGGCTCAAACTGGAGGAC+AGG + Chr2:55962177-55962196 MsG0280009667.01.T01:CDS 55.0%
AATGGAGGAAGGGCTTGCAG+AGG + Chr2:55961601-55961620 MsG0280009667.01.T01:CDS 55.0%
AGCACAAGAGGTTGCAGGAG+AGG + Chr2:55959960-55959979 MsG0280009667.01.T01:CDS 55.0%
AGGACAGGCTTTCCCTCAGT+TGG + Chr2:55962192-55962211 MsG0280009667.01.T01:CDS 55.0%
ATGGCTGATGAGAACCTGCG+AGG + Chr2:55961851-55961870 MsG0280009667.01.T01:CDS 55.0%
CATGGAAGCAAGGCCAATGG+AGG + Chr2:55961586-55961605 MsG0280009667.01.T01:CDS 55.0%
CCTCAAAACAGACTCCTCGC+AGG - Chr2:55961868-55961887 None:intergenic 55.0%
CGCAGGTTCTCATCAGCCAT+TGG - Chr2:55961851-55961870 None:intergenic 55.0%
CTTGCAGAGGCCATCGATGA+TGG + Chr2:55961614-55961633 MsG0280009667.01.T01:CDS 55.0%
GAAGCAAGGCCAATGGAGGA+AGG + Chr2:55961590-55961609 MsG0280009667.01.T01:CDS 55.0%
GACAACAGGTCCCAACATGG+TGG + Chr2:55961742-55961761 MsG0280009667.01.T01:CDS 55.0%
GACGAGAAATCTACGTGCCC+AGG - Chr2:55960141-55960160 None:intergenic 55.0%
GATGCCATTCACAGAGGAGG+CGG + Chr2:55961911-55961930 MsG0280009667.01.T01:CDS 55.0%
GATTCCTCTCTCCGAGTTCG+AGG + Chr2:55962321-55962340 MsG0280009667.01.T01:CDS 55.0%
GATTCTCTTGTGGCTGCTGC+TGG + Chr2:55959931-55959950 MsG0280009667.01.T01:CDS 55.0%
GCACCTGAACATGCTCTTGG+AGG + Chr2:55962028-55962047 MsG0280009667.01.T01:CDS 55.0%
GCCCTTCGAGAGCAAATGTG+TGG - Chr2:55958025-55958044 None:intergenic 55.0%
TCACCTTCCTTCTCCTGCCA+AGG + Chr2:55960836-55960855 MsG0280009667.01.T01:CDS 55.0%
TCCATCGGTGATGCGAAGTG+CGG - Chr2:55960175-55960194 None:intergenic 55.0%
TCTGCAAGCCCTTCCTCCAT+TGG - Chr2:55961602-55961621 None:intergenic 55.0%
TGTTTCGGCCCTGAGACAAC+AGG + Chr2:55961728-55961747 MsG0280009667.01.T01:CDS 55.0%
TTGTCCTCGAACTCGGAGAG+AGG - Chr2:55962328-55962347 None:intergenic 55.0%
! AAAGTGGGGTGTTAGGCCTC+TGG - Chr2:55962102-55962121 None:intergenic 55.0%
! CACCGATGGAGCACTTGTTG+TGG + Chr2:55960185-55960204 MsG0280009667.01.T01:CDS 55.0%
! CCCAGCTAGTACTGCCCTTT+TGG + Chr2:55960800-55960819 MsG0280009667.01.T01:CDS 55.0%
! CCGGGTTCTAACGGATCAGA+TGG - Chr2:55962241-55962260 None:intergenic 55.0%
! CCTGCGAGGAGTCTGTTTTG+AGG + Chr2:55961865-55961884 MsG0280009667.01.T01:CDS 55.0%
!! AGGCGTCGATGTGTGCTTGT+TGG - Chr2:55960598-55960617 None:intergenic 55.0%
!! CGATGGAGCACTTGTTGTGG+TGG + Chr2:55960188-55960207 MsG0280009667.01.T01:CDS 55.0%
ACGGTGGAGGATGTCCCTTG+TGG + Chr2:55961146-55961165 MsG0280009667.01.T01:CDS 60.0%
CGTGCCCAGGTGAGTCAATG+AGG - Chr2:55960128-55960147 None:intergenic 60.0%
GAGCCTTGGCAGGAGAAGGA+AGG - Chr2:55960842-55960861 None:intergenic 60.0%
TCGACGCCTACTTGCAAGCG+CGG + Chr2:55960609-55960628 MsG0280009667.01.T01:CDS 60.0%
! GCTGGTGTCCCGGGTTCTAA+CGG - Chr2:55962250-55962269 None:intergenic 60.0%
CTGGCCGCCTCCTCTGTGAA+TGG - Chr2:55961918-55961937 None:intergenic 65.0%
GCCGCACTTCGCATCACCGA+TGG + Chr2:55960171-55960190 MsG0280009667.01.T01:CDS 65.0%
TCGACAACGCGTGCAGCAGC+TGG - Chr2:55962268-55962287 None:intergenic 65.0%
CGTGCAGCAGCTGGTGTCCC+GGG - Chr2:55962259-55962278 None:intergenic 70.0%
GCGTGCAGCAGCTGGTGTCC+CGG - Chr2:55962260-55962279 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 55956953 55962354 55956953 ID=MsG0280009667.01;Name=MsG0280009667.01
Chr2 mRNA 55956953 55962354 55956953 ID=MsG0280009667.01.T01;Parent=MsG0280009667.01;Name=MsG0280009667.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|859
Chr2 exon 55956953 55957003 55956953 ID=MsG0280009667.01.T01:exon:5937;Parent=MsG0280009667.01.T01
Chr2 exon 55959543 55959630 55959543 ID=MsG0280009667.01.T01:exon:5936;Parent=MsG0280009667.01.T01
Chr2 exon 55959914 55962354 55959914 ID=MsG0280009667.01.T01:exon:5935;Parent=MsG0280009667.01.T01
Chr2 CDS 55956953 55957003 55956953 ID=MsG0280009667.01.T01:cds;Parent=MsG0280009667.01.T01
Chr2 CDS 55959543 55959630 55959543 ID=MsG0280009667.01.T01:cds;Parent=MsG0280009667.01.T01
Chr2 CDS 55959914 55962354 55959914 ID=MsG0280009667.01.T01:cds;Parent=MsG0280009667.01.T01
Gene Sequence

>MsG0280009667.01.T01

ATGGTAAGGTTTGATTTTTATCCTGAGTTGCCTGCTTTTAAGTGTGCAAATGTGAAGTTCACAGTGGATGAACTTCGATGGATCATGGACCTCAAACACAACATTCGGAATATGTCTGTTATTGCTCATGTCGATCACGGAAAATCAACTCTAACTGATTCTCTTGTGGCTGCTGCTGGCATTATAGCACAAGAGGTTGCAGGAGAGGTTAGGATGACAGATACTCGTCAAGATGAATCTGAGCGTGGCATAACAATCAAGTCAACCGGTATATCTCTCTACTATGAGATGAGTGATGGTGATTTGAAGAATTTCAAGGGACAACGGGAAGGGAACAAGTACCTTATAAACCTCATTGACTCACCTGGGCACGTAGATTTCTCGTCAGAGGTCACAGCCGCACTTCGCATCACCGATGGAGCACTTGTTGTGGTGGATTGTGTTGAAGGGGTCTGTGTACAAACTGAAACTGTGCTGAGACAAGCACTTGGAGAAAGGATTAAACCCGTTTTAACAGTTAACAAAATGGATAGATGTTTTCTTGAGCTTCATCTTGATGGAGAAGAGGCATACTCAACCATTCAGAGAGTCATTGAGAGTGTGAACGTCGTCATGGCAACATATGAAGATGCTTTACTTGGTGATGTTCAGGTTTACCCTGAAAAGGGAACAGTTTCTTTTTCAGCTGGTTTACATGGATGGTCTTTTACTCTCACCAACTTTGCTAAGATGTATGCTTCAAAGTTTGGAGTTGATGAGGAGAAGATGATGAATAGGCTTTGGGGTGAGAATTTCTTTGACTCTTCTACCAAAAAGTGGACCAACAAGCACACATCGACGCCTACTTGCAAGCGCGGTTTTGTTCAGTTTTGTTATGAACCAATCAAGCAGATTATTGAACTTTGTATGAATGATCAGAAGGGTAAGTTGTGGCCGATGTTGCAGAAACTTGGGGTGAATTTGAAGTCAGAAGAGAAAGAATTAACAGGAAAGGCTTTGATGAAGCGTGTTATGCAGAGTTGGCTCCCAGCTAGTACTGCCCTTTTGGAGATGATGATTTTTCACCTTCCTTCTCCTGCCAAGGCTCAAAAGTATCGTGTCGAGAATTTGTATGAGGGCCCCCTTGATGATCCTTATGCTTCTGCGATCCGAAATTGTGATCCTGAAGGACCTTTAATACTTTATGTCTCAAAGATGATTCCTGCCTCTGATAATGGTAGGTTTTATGCTTTCGGTCGTGTGTTTTCAGGTAAGGTTTCAACTGGTATGAAGGTCAGAATTATGGGACCAAATTATATCCCTGGGGAGAAGAAAGATTTGTATTTGAAAAGTGTTCAGAGAACGGTTATTTGGATGGGAAAGAAGCAAGAAACGGTGGAGGATGTCCCTTGTGGAAATACAGTTGCCATGGTGGGTTTGGATCAATTCATTACCAAGAATGCTACTTTAACAAATGAGAAAGAAGTCGACGCACACCCTATTAGAGCTATGAAGTTTTCAGTGTCACCTGTGGGAAGTGTAGCAGTTACATGCAAGGTTGCATCTGATCTTCCCAAGCTAGTCGAAGGCCTTAAACGGTTAGCAAAGTCAGATCCCATGGTGGCGTGTACAATTTCAGAGACTGGAGAACATATCATAGCTGCTGCTGGTGAGCTGCATCTTGAAATCTGCTTGAAGGATTTGCAGGATGATTTCATGAATGGAGCTGAGATTACAAAATCAGATCCTATCGTTTCTTTCCGCGAGACTGTGCTTGAGAAGTCTAGCCATACTGTGATGAGCAAGTCACCAAACAAACACAACCGTTTATACATGGAAGCAAGGCCAATGGAGGAAGGGCTTGCAGAGGCCATCGATGATGGAAAGATTGGACCAAGGGATGACCCAAAAAACCGTTTAAAAATATTGTCTGACGAGTTTGGTTGGGACAAAGATATTGCCAAAAAAGTATGGTGTTTCGGCCCTGAGACAACAGGTCCCAACATGGTGGTAGACACATGTAAAGGCGTACAATATCTGAACGAAATCAAGGACTCTGTCGTTACAGGTTTTCAGATGGCGTCAAAAGAAGGTCCAATGGCTGATGAGAACCTGCGAGGAGTCTGTTTTGAGGTTTGTGATGTTGTTCTTCATACTGATGCCATTCACAGAGGAGGCGGCCAGATCATTCCAACTGCTAGAAGAGTGTTCTATGCTGCTATGCTTACAGCAAAGCCGAGACTTCTAGAGCCGGTGTATCTGGTTGAAATACAAGCACCTGAACATGCTCTTGGAGGTATATACAGTGTTCTTAATCAGAAAAGAGGTCATGTGTTTGACGAATTCCAGAGGCCTAACACCCCACTTTACAATGTTAAGGCATACTTGCCTGTTATTGAATCATTTCAATTCAATGAATCATTAAGGGCTCAAACTGGAGGACAGGCTTTCCCTCAGTTGGTATTTGACCACTGGGATATGTTGCCATCTGATCCGTTAGAACCCGGGACACCAGCTGCTGCACGCGTTGTCGAGATAAGAAAAAAGAAAGGTTTAAAGGATCAGCTGATTCCTCTCTCCGAGTTCGAGGACAAGCTTTAA

Protein sequence

>MsG0280009667.01.T01

MVRFDFYPELPAFKCANVKFTVDELRWIMDLKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGEVRMTDTRQDESERGITIKSTGISLYYEMSDGDLKNFKGQREGNKYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIKPVLTVNKMDRCFLELHLDGEEAYSTIQRVIESVNVVMATYEDALLGDVQVYPEKGTVSFSAGLHGWSFTLTNFAKMYASKFGVDEEKMMNRLWGENFFDSSTKKWTNKHTSTPTCKRGFVQFCYEPIKQIIELCMNDQKGKLWPMLQKLGVNLKSEEKELTGKALMKRVMQSWLPASTALLEMMIFHLPSPAKAQKYRVENLYEGPLDDPYASAIRNCDPEGPLILYVSKMIPASDNGRFYAFGRVFSGKVSTGMKVRIMGPNYIPGEKKDLYLKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVGSVAVTCKVASDLPKLVEGLKRLAKSDPMVACTISETGEHIIAAAGELHLEICLKDLQDDFMNGAEITKSDPIVSFRETVLEKSSHTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGKIGPRDDPKNRLKILSDEFGWDKDIAKKVWCFGPETTGPNMVVDTCKGVQYLNEIKDSVVTGFQMASKEGPMADENLRGVCFEVCDVVLHTDAIHRGGGQIIPTARRVFYAAMLTAKPRLLEPVYLVEIQAPEHALGGIYSVLNQKRGHVFDEFQRPNTPLYNVKAYLPVIESFQFNESLRAQTGGQAFPQLVFDHWDMLPSDPLEPGTPAAARVVEIRKKKGLKDQLIPLSEFEDKL*