AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039912.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039912.01.T02 MTR_7g081500 88.462 78 9 0 1 78 64 141 1.34e-34 125
MsG0780039912.01.T02 MTR_7g081380 88.462 78 9 0 1 78 65 142 6.65e-34 123
MsG0780039912.01.T02 MTR_7g081380 87.500 32 4 0 78 109 380 411 3.97e-12 61.6
MsG0780039912.01.T02 MTR_7g081420 85.897 78 11 0 1 78 65 142 2.23e-33 122
MsG0780039912.01.T02 MTR_7g081580 83.333 78 13 0 1 78 65 142 5.37e-32 118
MsG0780039912.01.T02 MTR_7g481600 83.333 78 13 0 1 78 65 142 6.04e-32 117
MsG0780039912.01.T02 MTR_7g081750 74.026 77 20 0 2 78 65 141 1.04e-31 117
MsG0780039912.01.T02 MTR_5g085690 52.427 103 40 3 1 94 62 164 1.96e-26 102
MsG0780039912.01.T02 MTR_5g096750 54.000 100 37 3 1 91 65 164 5.64e-26 100
MsG0780039912.01.T02 MTR_4g103490 55.000 100 35 4 2 92 66 164 2.20e-25 99.4
MsG0780039912.01.T02 MTR_3g061110 55.556 99 34 3 4 92 64 162 6.70e-25 97.8
MsG0780039912.01.T02 MTR_4g103400 60.526 76 27 1 2 74 62 137 1.31e-24 97.1
MsG0780039912.01.T02 MTR_4g103430 54.118 85 37 1 2 84 62 146 1.69e-23 94.0
MsG0780039912.01.T02 MTR_4g103480 52.041 98 37 4 4 92 81 177 1.74e-23 94.0
MsG0780039912.01.T02 MTR_4g103450 52.326 86 37 2 2 84 36 120 3.07e-23 93.2
MsG0780039912.01.T02 MTR_4g103495 48.485 99 43 2 2 92 63 161 2.42e-22 90.5
MsG0780039912.01.T02 MTR_4g134320 62.687 67 25 0 2 68 63 129 1.03e-21 89.0
MsG0780039912.01.T02 MTR_7g098070 61.194 67 26 0 2 68 60 126 1.21e-21 88.6
MsG0780039912.01.T02 MTR_3g082200 49.425 87 40 1 1 83 64 150 4.25e-20 84.3
MsG0780039912.01.T02 MTR_8g083220 40.000 85 51 0 1 85 70 154 4.06e-16 72.8
MsG0780039912.01.T02 MTR_8g079900 55.357 56 25 0 8 63 69 124 6.65e-14 66.6
MsG0780039912.01.T02 MTR_7g104200 51.613 62 30 0 2 63 61 122 1.11e-13 65.9
MsG0780039912.01.T02 MTR_8g033150 53.571 56 26 0 8 63 52 107 1.70e-13 65.5
MsG0780039912.01.T02 MTR_8g033150 53.571 56 26 0 8 63 79 134 1.78e-13 65.5
MsG0780039912.01.T02 MTR_8g072440 49.206 63 32 0 1 63 20 82 2.15e-13 65.1
MsG0780039912.01.T02 MTR_5g025010 53.333 60 28 0 4 63 60 119 5.23e-13 63.9
MsG0780039912.01.T02 MTR_5g025010 53.333 60 28 0 4 63 28 87 5.63e-13 63.9
MsG0780039912.01.T02 MTR_8g072440 50.000 64 30 1 2 63 61 124 5.70e-13 63.9
MsG0780039912.01.T02 MTR_7g075890 50.000 60 30 0 4 63 221 280 1.19e-12 63.2
MsG0780039912.01.T02 MTR_3g114160 50.877 57 28 0 9 65 4 60 1.98e-12 62.4
MsG0780039912.01.T02 MTR_6g055410 51.923 52 25 0 12 63 73 124 6.32e-12 60.8
MsG0780039912.01.T02 MTR_4g071560 39.744 78 47 0 1 78 25 102 1.19e-11 60.1
MsG0780039912.01.T02 MTR_3g104930 50.000 58 29 0 9 66 61 118 1.22e-11 60.1
MsG0780039912.01.T02 MTR_8g042670 47.541 61 32 0 1 61 62 122 1.23e-11 60.1
MsG0780039912.01.T02 MTR_3g464790 50.877 57 28 0 9 65 66 122 3.79e-11 58.5
MsG0780039912.01.T02 MTR_1g048110 50.000 52 26 0 12 63 73 124 4.47e-11 58.5
MsG0780039912.01.T02 MTR_3g010080 48.077 52 27 0 12 63 72 123 4.56e-11 58.5
MsG0780039912.01.T02 MTR_3g114410 50.820 61 29 1 5 65 64 123 5.63e-11 58.2
MsG0780039912.01.T02 MTR_8g006680 48.077 52 27 0 12 63 71 122 7.34e-11 57.8
MsG0780039912.01.T02 MTR_8g005300 48.077 52 27 0 12 63 71 122 7.34e-11 57.8
MsG0780039912.01.T02 MTR_8g005640 48.077 52 27 0 12 63 71 122 7.34e-11 57.8
MsG0780039912.01.T02 MTR_6g055570 47.368 57 30 0 7 63 68 124 9.82e-11 57.4
MsG0780039912.01.T01 MTR_7g081420 86.316 285 38 1 1 284 503 787 1.82e-175 504
MsG0780039912.01.T01 MTR_7g081500 87.368 285 35 1 1 284 501 785 9.89e-169 487
MsG0780039912.01.T01 MTR_7g081580 80.351 285 55 1 1 284 502 786 7.57e-162 469
MsG0780039912.01.T01 MTR_7g081750 80.351 285 55 1 1 284 516 800 6.34e-161 467
MsG0780039912.01.T01 MTR_7g081380 80.769 286 53 2 1 284 524 809 5.93e-160 465
MsG0780039912.01.T01 MTR_7g481600 80.702 285 54 1 1 284 502 786 2.43e-155 453
MsG0780039912.01.T01 MTR_5g085690 62.898 283 100 4 1 281 509 788 1.89e-115 350
MsG0780039912.01.T01 MTR_4g103495 51.736 288 128 7 1 282 342 624 4.32e-91 283
MsG0780039912.01.T01 MTR_5g096750 52.941 289 118 6 1 284 492 767 3.83e-90 283
MsG0780039912.01.T01 MTR_3g061110 52.797 286 128 6 1 283 473 754 1.31e-89 282
MsG0780039912.01.T01 MTR_7g081660 77.473 182 40 1 104 284 374 555 1.52e-89 277
MsG0780039912.01.T01 MTR_7g098070 57.664 274 105 8 11 281 496 761 4.60e-89 281
MsG0780039912.01.T01 MTR_4g134320 57.818 275 103 9 11 281 500 765 6.90e-89 280
MsG0780039912.01.T01 MTR_4g103430 52.397 292 118 9 1 281 487 768 9.28e-88 277
MsG0780039912.01.T01 MTR_4g103400 51.049 286 132 7 1 281 494 776 2.84e-87 276
MsG0780039912.01.T01 MTR_4g103480 50.694 288 131 7 1 282 505 787 1.01e-86 275
MsG0780039912.01.T01 MTR_4g103490 50.699 286 134 6 1 282 502 784 1.12e-86 275
MsG0780039912.01.T01 MTR_3g082200 48.951 286 136 6 1 282 353 632 1.43e-86 271
MsG0780039912.01.T01 MTR_3g082200 48.951 286 136 6 1 282 368 647 1.62e-86 271
MsG0780039912.01.T01 MTR_5g055920 50.694 288 131 7 1 282 385 667 2.32e-86 271
MsG0780039912.01.T01 MTR_3g082200 48.951 286 136 6 1 282 491 770 1.31e-85 272
MsG0780039912.01.T01 MTR_4g103450 50.347 288 132 7 1 282 462 744 9.07e-85 269
MsG0780039912.01.T01 MTR_4g103495 55.605 223 91 5 1 218 491 710 1.41e-74 243
MsG0780039912.01.T01 MTR_4g095360 46.853 286 139 7 6 282 474 755 2.78e-74 241
MsG0780039912.01.T01 MTR_3g102810 45.139 288 141 6 6 279 468 752 3.09e-71 233
MsG0780039912.01.T01 MTR_8g072440 46.290 283 135 5 3 282 443 711 1.08e-70 231
MsG0780039912.01.T01 MTR_1g078110 45.734 293 140 7 1 281 468 753 1.64e-70 231
MsG0780039912.01.T01 MTR_8g072440 46.290 283 135 5 3 282 485 753 2.33e-70 231
MsG0780039912.01.T01 MTR_8g024380 46.207 290 144 6 1 281 472 758 3.52e-70 231
MsG0780039912.01.T01 MTR_2g042130 43.599 289 148 5 1 279 487 770 5.15e-70 231
MsG0780039912.01.T01 MTR_5g016120 44.251 287 149 7 6 284 480 763 8.77e-70 229
MsG0780039912.01.T01 MTR_7g075900 47.500 280 132 9 13 281 496 771 1.15e-69 229
MsG0780039912.01.T01 MTR_0047s0120 44.599 287 148 7 6 284 476 759 1.31e-69 229
MsG0780039912.01.T01 MTR_1g102350 44.170 283 148 6 6 281 497 776 6.64e-69 228
MsG0780039912.01.T01 MTR_4g073540 44.330 291 146 7 6 283 482 769 3.66e-68 225
MsG0780039912.01.T01 MTR_2g049200 45.675 289 145 5 1 281 471 755 1.45e-67 224
MsG0780039912.01.T01 MTR_5g025010 44.948 287 139 8 1 282 446 718 1.48e-67 223
MsG0780039912.01.T01 MTR_5g025010 44.948 287 139 8 1 282 478 750 2.18e-67 223
MsG0780039912.01.T01 MTR_8g024390 43.919 296 142 8 1 281 471 757 1.18e-65 219
MsG0780039912.01.T01 MTR_8g024420 44.330 291 138 9 6 281 440 721 1.43e-65 218
MsG0780039912.01.T01 MTR_4g125180 43.509 285 144 7 6 279 471 749 5.09e-65 217
MsG0780039912.01.T01 MTR_8g021130 44.178 292 134 10 9 282 495 775 1.10e-63 214
MsG0780039912.01.T01 MTR_1g018510 42.509 287 144 7 11 279 440 723 2.81e-63 212
MsG0780039912.01.T01 MTR_4g053630 44.286 280 146 7 6 281 379 652 1.18e-62 209
MsG0780039912.01.T01 MTR_4g053630 44.286 280 146 7 6 281 456 729 3.33e-62 209
MsG0780039912.01.T01 MTR_8g022870 42.561 289 151 9 6 281 489 775 6.81e-62 209
MsG0780039912.01.T01 MTR_1g006990 44.043 277 137 6 13 282 470 735 5.57e-60 203
MsG0780039912.01.T01 MTR_3g104930 41.608 286 153 8 6 281 480 761 8.76e-60 202
MsG0780039912.01.T01 MTR_7g118080 44.330 291 149 7 1 281 468 755 9.71e-60 202
MsG0780039912.01.T01 MTR_8g083220 40.625 288 153 7 1 282 500 775 1.33e-59 202
MsG0780039912.01.T01 MTR_3g114420 42.014 288 148 9 6 281 484 764 1.62e-59 202
MsG0780039912.01.T01 MTR_1g048110 41.516 277 144 7 13 282 466 731 1.34e-58 199
MsG0780039912.01.T01 MTR_8g005710 41.844 282 139 10 13 283 433 700 1.36e-58 199
MsG0780039912.01.T01 MTR_7g098630 43.051 295 140 9 6 281 475 760 2.84e-58 200
MsG0780039912.01.T01 MTR_1g007030 42.238 277 142 6 13 282 468 733 2.86e-58 198
MsG0780039912.01.T01 MTR_2g018135 42.857 287 147 6 4 281 504 782 3.27e-58 199
MsG0780039912.01.T01 MTR_8g027260 40.484 289 149 9 5 283 378 653 4.78e-58 196
MsG0780039912.01.T01 MTR_2g018125 42.160 287 149 7 4 281 505 783 7.00e-58 198
MsG0780039912.01.T01 MTR_7g079310 41.958 286 154 7 5 281 481 763 7.32e-58 197
MsG0780039912.01.T01 MTR_8g042670 39.789 284 158 9 6 282 357 634 3.76e-57 194
MsG0780039912.01.T01 MTR_4g053635 42.143 280 149 8 6 281 402 672 4.16e-57 194
MsG0780039912.01.T01 MTR_2g042650 42.238 277 142 7 13 282 378 643 5.11e-57 194
MsG0780039912.01.T01 MTR_3g464790 41.608 286 141 8 6 281 462 731 5.58e-57 195
MsG0780039912.01.T01 MTR_7g034380 42.606 284 136 11 13 284 426 694 1.17e-56 193
MsG0780039912.01.T01 MTR_7g079300 39.931 288 157 8 5 281 483 765 1.45e-56 194
MsG0780039912.01.T01 MTR_8g042670 39.789 284 158 9 6 282 481 758 1.78e-56 194
MsG0780039912.01.T01 MTR_8g033150 43.011 279 138 8 12 281 458 724 5.81e-56 192
MsG0780039912.01.T01 MTR_8g033150 43.011 279 138 8 12 281 485 751 6.41e-56 192
MsG0780039912.01.T01 MTR_5g011190 42.756 283 144 8 6 281 482 753 5.73e-55 189
MsG0780039912.01.T01 MTR_8g042710 39.007 282 155 6 11 282 490 764 1.11e-54 189
MsG0780039912.01.T01 MTR_1g079120 40.816 294 149 9 5 281 475 760 1.93e-54 188
MsG0780039912.01.T01 MTR_5g011370 41.958 286 148 8 6 284 502 776 2.11e-54 188
MsG0780039912.01.T01 MTR_5g011340 42.160 287 146 9 6 284 479 753 4.62e-54 187
MsG0780039912.01.T01 MTR_4g102400 42.105 285 144 9 6 281 480 752 6.12e-54 187
MsG0780039912.01.T01 MTR_8g079900 41.577 279 142 8 12 281 377 643 6.85e-54 185
MsG0780039912.01.T01 MTR_7g104200 39.502 281 150 6 10 281 472 741 1.71e-53 185
MsG0780039912.01.T01 MTR_8g079900 41.577 279 142 8 12 281 475 741 1.90e-53 185
MsG0780039912.01.T01 MTR_8g024370 41.724 290 156 6 1 281 471 756 2.54e-53 185
MsG0780039912.01.T01 MTR_5g011310 41.463 287 148 9 6 284 482 756 4.75e-53 184
MsG0780039912.01.T01 MTR_5g011320 41.115 287 149 9 6 284 474 748 8.03e-53 184
MsG0780039912.01.T01 MTR_6g055570 40.569 281 145 8 13 283 463 731 1.97e-52 182
MsG0780039912.01.T01 MTR_8g006680 39.286 280 139 8 13 282 465 723 8.63e-52 181
MsG0780039912.01.T01 MTR_8g005300 39.286 280 139 8 13 282 465 723 8.63e-52 181
MsG0780039912.01.T01 MTR_8g005640 39.286 280 139 8 13 282 465 723 8.63e-52 181
MsG0780039912.01.T01 MTR_5g011280 39.576 283 153 8 6 281 484 755 9.72e-52 181
MsG0780039912.01.T01 MTR_7g075890 39.362 282 147 8 13 283 631 899 1.20e-51 181
MsG0780039912.01.T01 MTR_6g055410 40.074 272 141 8 22 283 454 713 1.37e-50 177
MsG0780039912.01.T01 MTR_3g010080 38.571 280 149 8 13 282 466 732 1.87e-49 174
MsG0780039912.01.T01 MTR_5g011270 39.223 283 154 8 6 281 480 751 2.11e-49 174
MsG0780039912.01.T01 MTR_5g011260 38.869 283 155 8 6 281 480 751 8.87e-49 172
MsG0780039912.01.T01 MTR_2g044630 40.000 255 133 8 36 282 464 706 6.61e-47 167
MsG0780039912.01.T01 MTR_6g075370 42.629 251 115 9 13 250 424 658 6.97e-47 167
MsG0780039912.01.T01 MTR_2g042640 42.857 238 104 7 13 243 399 611 1.11e-46 165
MsG0780039912.01.T01 MTR_4g127480 38.699 292 151 11 8 282 534 814 8.83e-44 159
MsG0780039912.01.T01 MTR_3g452290 38.735 253 116 6 35 283 353 570 1.98e-40 147
MsG0780039912.01.T01 MTR_3g451220 38.735 253 116 6 35 283 353 570 1.98e-40 147
MsG0780039912.01.T01 MTR_2g037850 37.762 286 150 12 11 279 537 811 1.53e-39 147
MsG0780039912.01.T01 MTR_3g114140 38.776 245 132 9 6 239 184 421 4.12e-39 142
MsG0780039912.01.T01 MTR_8g089230 36.458 288 152 11 13 281 570 845 1.83e-34 132
MsG0780039912.01.T01 MTR_2g070260 41.398 186 89 6 74 250 1 175 4.32e-34 123
MsG0780039912.01.T01 MTR_5g044060 50.370 135 65 2 1 134 1 134 1.07e-32 119
MsG0780039912.01.T01 MTR_4g126230 39.572 187 88 6 13 191 55 224 1.40e-31 117
MsG0780039912.01.T01 MTR_2g046740 35.473 296 151 13 13 284 562 841 4.43e-30 119
MsG0780039912.01.T01 MTR_4g071560 49.194 124 55 2 1 121 412 530 6.25e-29 115
MsG0780039912.01.T01 MTR_4g132620 31.690 284 168 12 13 281 542 814 1.06e-26 109
MsG0780039912.01.T01 MTR_4g053665 33.071 254 122 10 32 281 1 210 8.73e-26 101
MsG0780039912.01.T01 MTR_8g042710 48.214 112 55 1 11 122 490 598 1.32e-24 103
MsG0780039912.01.T01 MTR_3g114410 52.475 101 46 2 6 106 483 581 1.61e-24 103
MsG0780039912.01.T01 MTR_8g027660 31.841 201 118 5 82 281 64 246 2.06e-24 99.0
MsG0780039912.01.T01 MTR_5g081130 35.542 166 93 7 125 281 12 172 5.49e-19 83.2
MsG0780039912.01.T01 MTR_7g079295 34.356 163 84 8 133 281 356 509 1.97e-14 73.6
MsG0780039912.01.T01 MTR_3g005755 48.649 74 37 1 63 135 235 308 2.55e-14 72.0
MsG0780039912.01.T01 MTR_5g011300 45.556 90 48 1 74 163 1 89 1.12e-13 66.2
MsG0780039912.01.T01 MTR_3g114400 32.738 168 84 8 125 281 13 162 1.17e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039912.01.T02 AT5G59810 53.000 100 38 3 2 92 75 174 1.86e-24 96.7
MsG0780039912.01.T02 AT2G04160 49.485 97 40 3 4 91 67 163 3.84e-20 84.3
MsG0780039912.01.T02 AT4G26330 50.000 64 32 0 4 67 13 76 1.36e-15 71.2
MsG0780039912.01.T02 AT4G26330 50.000 64 32 0 4 67 13 76 1.37e-15 71.2
MsG0780039912.01.T02 AT4G10520 37.647 85 53 0 1 85 56 140 3.67e-14 67.4
MsG0780039912.01.T02 AT4G10530 37.647 85 53 0 1 85 56 140 4.41e-14 67.0
MsG0780039912.01.T02 AT4G10550 37.647 85 53 0 1 85 5 89 7.15e-14 66.6
MsG0780039912.01.T02 AT4G10550 37.647 85 53 0 1 85 5 89 7.15e-14 66.6
MsG0780039912.01.T02 AT4G10550 37.647 85 53 0 1 85 61 145 8.40e-14 66.2
MsG0780039912.01.T02 AT4G10550 37.647 85 53 0 1 85 77 161 9.09e-14 66.2
MsG0780039912.01.T02 AT5G03620 50.794 63 31 0 1 63 61 123 1.12e-13 65.9
MsG0780039912.01.T02 AT1G32940 34.021 97 58 1 1 91 56 152 1.19e-13 65.9
MsG0780039912.01.T02 AT5G03620 50.794 63 31 0 1 63 61 123 1.21e-13 65.9
MsG0780039912.01.T02 AT1G32940 34.021 97 58 1 1 91 56 152 1.23e-13 65.9
MsG0780039912.01.T02 AT1G32940 34.021 97 58 1 1 91 5 101 1.24e-13 65.9
MsG0780039912.01.T02 AT1G32940 34.021 97 58 1 1 91 5 101 1.24e-13 65.9
MsG0780039912.01.T02 AT4G21650 43.750 64 36 0 1 64 68 131 1.43e-13 65.5
MsG0780039912.01.T02 AT5G45650 46.377 69 35 1 4 70 57 125 1.61e-13 65.5
MsG0780039912.01.T02 AT5G45650 46.377 69 35 1 4 70 57 125 1.61e-13 65.5
MsG0780039912.01.T02 AT4G21630 42.424 66 38 0 1 66 66 131 5.37e-13 63.9
MsG0780039912.01.T02 AT1G32960 34.021 97 58 1 1 91 59 155 6.22e-13 63.9
MsG0780039912.01.T02 AT4G00230 50.000 60 30 0 4 63 66 125 2.80e-12 62.0
MsG0780039912.01.T02 AT4G21640 43.750 64 36 0 1 64 68 131 2.82e-12 62.0
MsG0780039912.01.T02 AT4G00230 50.000 60 30 0 4 63 66 125 3.43e-12 61.6
MsG0780039912.01.T02 AT5G11940 32.990 97 59 1 1 91 64 160 5.70e-12 61.2
MsG0780039912.01.T02 AT4G10510 32.941 85 57 0 1 85 49 133 2.10e-11 59.3
MsG0780039912.01.T02 AT1G32950 30.928 97 61 1 1 91 5 101 2.28e-11 59.3
MsG0780039912.01.T02 AT1G66220 31.959 97 60 1 1 91 64 160 2.38e-11 59.3
MsG0780039912.01.T02 AT4G10510 32.941 85 57 0 1 85 61 145 2.38e-11 59.3
MsG0780039912.01.T02 AT4G10510 32.941 85 57 0 1 85 5 89 2.39e-11 59.3
MsG0780039912.01.T02 AT1G32950 30.928 97 61 1 1 91 56 152 2.89e-11 58.9
MsG0780039912.01.T02 AT5G58830 48.077 52 27 0 12 63 70 121 7.52e-11 57.8
MsG0780039912.01.T02 AT3G14240 36.000 75 48 0 11 85 61 135 9.75e-11 57.8
MsG0780039912.01.T01 AT5G59810 54.182 275 118 6 11 282 506 775 1.69e-91 287
MsG0780039912.01.T01 AT2G04160 53.333 285 127 5 1 282 490 771 3.90e-90 284
MsG0780039912.01.T01 AT5G67360 44.876 283 147 5 6 282 476 755 6.64e-77 248
MsG0780039912.01.T01 AT2G05920 46.953 279 142 5 6 279 470 747 1.96e-76 247
MsG0780039912.01.T01 AT4G26330 43.206 287 151 6 4 281 438 721 5.88e-66 219
MsG0780039912.01.T01 AT4G26330 43.206 287 151 6 4 281 452 735 7.25e-66 219
MsG0780039912.01.T01 AT3G14067 42.466 292 151 8 6 282 479 768 2.85e-65 218
MsG0780039912.01.T01 AT5G45650 42.424 297 134 8 4 281 510 788 1.21e-64 216
MsG0780039912.01.T01 AT5G45650 42.424 297 134 8 4 281 510 788 1.21e-64 216
MsG0780039912.01.T01 AT5G51750 43.310 284 150 5 6 281 494 774 1.60e-64 216
MsG0780039912.01.T01 AT3G14240 42.215 289 152 8 6 281 483 769 2.72e-63 213
MsG0780039912.01.T01 AT1G20160 43.463 283 145 7 12 284 448 725 6.97e-61 205
MsG0780039912.01.T01 AT4G34980 41.924 291 154 8 6 283 472 760 7.73e-61 206
MsG0780039912.01.T01 AT1G20160 43.463 283 145 7 12 284 487 764 9.84e-61 205
MsG0780039912.01.T01 AT1G32970 42.606 284 149 5 5 284 452 725 4.61e-60 203
MsG0780039912.01.T01 AT4G00230 43.369 279 138 8 12 281 476 743 4.41e-59 201
MsG0780039912.01.T01 AT1G01900 45.070 284 136 8 13 281 493 771 5.07e-59 201
MsG0780039912.01.T01 AT5G58840 42.908 282 143 7 8 281 435 706 1.85e-58 198
MsG0780039912.01.T01 AT1G04110 42.808 292 150 8 6 284 486 773 1.54e-57 197
MsG0780039912.01.T01 AT4G10540 39.590 293 147 7 4 284 492 766 6.91e-56 192
MsG0780039912.01.T01 AT5G59120 40.925 281 144 7 11 281 459 727 1.39e-55 191
MsG0780039912.01.T01 AT5G59100 42.561 289 136 8 8 281 464 737 1.45e-55 191
MsG0780039912.01.T01 AT4G10520 40.000 290 156 6 1 284 470 747 1.78e-55 191
MsG0780039912.01.T01 AT4G21640 40.559 286 157 4 1 282 452 728 3.08e-55 190
MsG0780039912.01.T01 AT4G10550 40.351 285 155 7 4 284 440 713 3.33e-55 190
MsG0780039912.01.T01 AT4G10550 40.351 285 155 7 4 284 440 713 3.33e-55 190
MsG0780039912.01.T01 AT4G10550 40.351 285 155 7 4 284 512 785 4.97e-55 190
MsG0780039912.01.T01 AT4G10550 40.351 285 155 7 4 284 496 769 5.15e-55 190
MsG0780039912.01.T01 AT5G11940 42.069 290 152 9 1 284 476 755 7.02e-55 189
MsG0780039912.01.T01 AT5G59190 42.391 276 141 6 11 279 422 686 7.15e-55 189
MsG0780039912.01.T01 AT5G58820 42.349 281 134 8 13 281 436 700 1.54e-54 188
MsG0780039912.01.T01 AT4G21630 40.210 286 158 4 1 282 478 754 5.54e-54 187
MsG0780039912.01.T01 AT1G66220 39.100 289 153 7 1 284 477 747 7.87e-54 186
MsG0780039912.01.T01 AT5G59090 40.214 281 146 7 11 281 460 728 8.71e-54 186
MsG0780039912.01.T01 AT5G59090 40.214 281 146 7 11 281 458 726 8.72e-54 186
MsG0780039912.01.T01 AT5G58830 40.072 277 148 6 13 281 439 705 9.15e-54 186
MsG0780039912.01.T01 AT1G32940 40.273 293 145 6 4 284 440 714 1.56e-53 185
MsG0780039912.01.T01 AT1G32940 40.273 293 145 6 4 284 440 714 1.56e-53 185
MsG0780039912.01.T01 AT5G59090 40.214 281 141 7 11 281 460 723 1.76e-53 185
MsG0780039912.01.T01 AT3G46850 41.319 288 146 10 3 281 461 734 2.82e-53 185
MsG0780039912.01.T01 AT5G03620 40.604 298 145 12 5 283 476 760 3.18e-53 185
MsG0780039912.01.T01 AT4G10510 39.298 285 159 6 4 284 423 697 4.21e-53 184
MsG0780039912.01.T01 AT1G32940 40.273 293 145 6 4 284 491 765 4.32e-53 184
MsG0780039912.01.T01 AT4G10510 39.298 285 159 6 4 284 438 712 5.32e-53 184
MsG0780039912.01.T01 AT5G45640 40.000 290 125 8 11 281 492 751 8.02e-53 184
MsG0780039912.01.T01 AT5G59130 41.155 277 142 6 13 281 423 686 8.11e-53 183
MsG0780039912.01.T01 AT4G10510 39.298 285 159 6 4 284 482 756 8.12e-53 184
MsG0780039912.01.T01 AT4G10510 39.298 285 159 6 4 284 494 768 9.51e-53 184
MsG0780039912.01.T01 AT5G59130 41.155 277 142 6 13 281 462 725 1.03e-52 183
MsG0780039912.01.T01 AT1G32950 38.596 285 161 5 4 284 439 713 1.16e-52 183
MsG0780039912.01.T01 AT5G59130 41.155 277 142 6 13 281 452 715 1.25e-52 183
MsG0780039912.01.T01 AT5G59130 41.155 277 142 6 13 281 458 721 1.25e-52 183
MsG0780039912.01.T01 AT1G32950 38.596 285 161 5 4 284 490 764 1.60e-52 183
MsG0780039912.01.T01 AT4G21650 38.112 286 164 4 1 282 485 761 3.56e-52 182
MsG0780039912.01.T01 AT3G46840 40.625 288 148 11 3 281 461 734 3.29e-51 179
MsG0780039912.01.T01 AT1G32960 36.824 296 157 6 1 284 491 768 1.07e-50 178
MsG0780039912.01.T01 AT1G20150 38.796 299 155 10 5 284 484 773 7.71e-50 176
MsG0780039912.01.T01 AT4G21326 38.983 295 148 7 1 282 413 688 1.46e-49 174
MsG0780039912.01.T01 AT1G66210 38.832 291 154 11 1 284 480 753 1.59e-49 174
MsG0780039912.01.T01 AT4G21323 38.832 291 159 8 1 284 518 796 2.04e-48 172
MsG0780039912.01.T01 AT4G15040 39.928 278 146 8 13 281 420 685 1.29e-44 160
MsG0780039912.01.T01 AT4G15040 39.928 278 146 8 13 281 420 685 1.29e-44 160
MsG0780039912.01.T01 AT4G10530 36.552 290 153 8 1 284 474 738 1.81e-44 160
MsG0780039912.01.T01 AT2G39850 36.770 291 147 11 14 281 489 765 5.69e-42 154
MsG0780039912.01.T01 AT4G30020 35.548 301 155 12 8 284 531 816 3.38e-41 151
MsG0780039912.01.T01 AT4G30020 35.548 301 155 12 8 284 531 816 3.38e-41 151
MsG0780039912.01.T01 AT4G30020 35.548 301 155 12 8 284 531 816 3.38e-41 151
MsG0780039912.01.T01 AT4G30020 35.548 301 155 12 8 284 531 816 3.38e-41 151
MsG0780039912.01.T01 AT5G67090 38.112 286 125 12 5 270 462 715 4.99e-41 150
MsG0780039912.01.T01 AT2G19170 36.644 292 148 12 10 279 532 808 1.91e-40 149
MsG0780039912.01.T01 AT2G19170 36.644 292 148 12 10 279 532 808 1.91e-40 149
MsG0780039912.01.T01 AT1G32980 42.781 187 102 3 70 252 3 188 8.77e-40 137
MsG0780039912.01.T01 AT4G20430 34.708 291 159 12 13 284 549 827 1.67e-32 126
MsG0780039912.01.T01 AT4G20430 34.708 291 159 12 13 284 573 851 2.17e-32 126
MsG0780039912.01.T01 AT4G20430 34.708 291 159 12 13 284 573 851 2.17e-32 126
MsG0780039912.01.T01 AT1G62340 32.500 280 173 6 13 282 557 830 3.49e-32 125
MsG0780039912.01.T01 AT5G03620 56.863 102 43 1 5 106 476 576 8.68e-30 118
MsG0780039912.01.T01 AT1G30600 35.498 231 121 8 2 212 532 754 1.68e-28 115
MsG0780039912.01.T01 AT5G44530 34.680 297 151 15 13 284 558 836 1.07e-27 112
MsG0780039912.01.T01 AT5G58840 58.333 96 39 1 11 106 438 532 1.36e-26 108
MsG0780039912.01.T01 AT4G00230 51.020 98 47 1 12 109 476 572 1.41e-25 106
MsG0780039912.01.T01 AT5G44530 32.298 322 150 16 13 284 558 861 4.12e-24 102
MsG0780039912.01.T01 AT5G59110 35.185 162 93 5 130 281 7 166 3.60e-21 88.6
MsG0780039912.01.T01 AT1G32940 49.038 104 45 1 4 107 491 586 5.08e-19 87.4

Find 160 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACATTAAATTCAACTATT+TGG 0.117822 7:+70357971 None:intergenic
ACAACATTTAAACCAATATT+TGG 0.166325 7:+70358250 None:intergenic
TGAATTTAATGTGTTATTAT+TGG 0.173417 7:-70357962 MsG0780039912.01.T01:three_prime_UTR
CGTACCAGGTGCAGCATATT+TGG 0.206283 7:-70361090 MsG0780039912.01.T01:five_prime_UTR
TTGAACTTCTTATGTGCTTC+TGG 0.222659 7:-70358373 MsG0780039912.01.T01:CDS
TCCATTGCAGTTCTCCAAAT+TGG 0.226476 7:+70358053 None:intergenic
ATCTTCTCATTATGATTTAC+TGG 0.226804 7:-70363430 MsG0780039912.01.T01:five_prime_UTR
ATGTCTTGCCCTCATGTTGC+TGG 0.236468 7:-70359307 MsG0780039912.01.T01:CDS
TGTTTATGACCTAGGGATTA+AGG 0.261675 7:-70358401 MsG0780039912.01.T01:CDS
TAACACTGTAAATGATAAAT+AGG 0.270779 7:+70363519 None:intergenic
TCAATCACATTACCAAATAT+TGG 0.277548 7:-70358262 MsG0780039912.01.T01:CDS
GAATTTAATGTGTTATTATT+GGG 0.278648 7:-70357961 MsG0780039912.01.T01:three_prime_UTR
ACACGTTCTTGGGAATTTCT+TGG 0.280926 7:-70363030 MsG0780039912.01.T01:five_prime_UTR
ACTGCAAATCCATTTGCTTA+TGG 0.284883 7:-70358466 MsG0780039912.01.T01:CDS
TCAAAACACTTCATCTGAAT+TGG 0.287435 7:-70359270 MsG0780039912.01.T01:CDS
AATCCATTTGCTTATGGTTC+AGG 0.301567 7:-70358460 MsG0780039912.01.T01:CDS
TCCTTGAATTTCAAGAAAAT+AGG 0.302304 7:-70358136 MsG0780039912.01.T01:CDS
AACTGCACACTACACGTTCT+TGG 0.318962 7:-70363041 MsG0780039912.01.T01:five_prime_UTR
TGATTTACTGGGTTCAATCT+TGG 0.321841 7:-70363418 MsG0780039912.01.T01:five_prime_UTR
TTGTTGCTGTTGTTTGGATA+TGG 0.323597 7:-70357898 MsG0780039912.01.T01:three_prime_UTR
TATAACACCTTTAGTATTGA+TGG 0.332691 7:+70359568 None:intergenic
CATTTGCGTTGAACAGTAAT+GGG 0.333841 7:+70358004 None:intergenic
AACATGACATTTACTTGTTC+AGG 0.339929 7:-70358316 MsG0780039912.01.T01:CDS
CCTCATGTTGCTGGGACTGC+TGG 0.348087 7:-70359298 MsG0780039912.01.T01:CDS
TTGAAGGATATGATTTCAAT+AGG 0.352218 7:-70360882 MsG0780039912.01.T01:five_prime_UTR
CCAAGGGGAAAATACCAATT+TGG 0.360143 7:-70358067 MsG0780039912.01.T01:CDS
CCTTGTTTGCATTAGGTGTT+GGG 0.361650 7:-70361658 MsG0780039912.01.T01:intron
CACTTTGAGACCACACTTGT+AGG 0.365255 7:+70361018 None:intergenic
TTCCATAAGTTCAGTTGCTC+AGG 0.365406 7:-70360022 MsG0780039912.01.T01:intron
GTTCCTTGCATTACATTGAA+TGG 0.365594 7:+70359334 None:intergenic
TAGAAGGATCAAGTGGTTCC+TGG 0.373166 7:+70360361 None:intergenic
TCCTGGGTCCATTGCACTGT+TGG 0.382552 7:+70358426 None:intergenic
AGCTTGGCAAAAGGAAGGTT+TGG 0.395784 7:-70362983 MsG0780039912.01.T01:five_prime_UTR
TATGGCAATGGTACTGTAAA+AGG 0.400843 7:-70361067 MsG0780039912.01.T01:five_prime_UTR
GATGAGTATGAAGCCATAAC+TGG 0.406220 7:+70359613 None:intergenic
TAGGCCCAATTCCAGCAAAA+TGG 0.407319 7:-70361605 MsG0780039912.01.T01:five_prime_UTR
GATTTACTGGGTTCAATCTT+GGG 0.410597 7:-70363417 MsG0780039912.01.T01:five_prime_UTR
CAAACAGCACGTGACTTTGT+AGG 0.414204 7:-70361152 MsG0780039912.01.T01:five_prime_UTR
ACAGTGTTACATTGTATACT+TGG 0.419702 7:-70363505 MsG0780039912.01.T01:five_prime_UTR
TTCCTTGCATTACATTGAAT+GGG 0.423057 7:+70359335 None:intergenic
GATATAATCTCACTTTCTCT+TGG 0.429787 7:-70360936 MsG0780039912.01.T01:five_prime_UTR
ACTGCACACTACACGTTCTT+GGG 0.432676 7:-70363040 MsG0780039912.01.T01:five_prime_UTR
GCAACATTAGTAACACTTCC+AGG 0.433684 7:+70360798 None:intergenic
TGAATCGATGTTAGCTATGA+TGG 0.434283 7:+70362952 None:intergenic
TATATCAACACCATCACTAA+TGG 0.435155 7:+70360953 None:intergenic
TCATTTGCGTTGAACAGTAA+TGG 0.436775 7:+70358003 None:intergenic
TTGTTGTTGTTGCTGTTGTT+TGG 0.437076 7:-70357904 MsG0780039912.01.T01:three_prime_UTR
GAGAAATCAACAAGAATCAA+TGG 0.437082 7:-70359959 MsG0780039912.01.T01:five_prime_UTR
TGCATCACTTATAGGCTTGT+TGG 0.444955 7:+70358501 None:intergenic
TAAGTGCTGTAATGAGTTGT+TGG 0.445029 7:+70358344 None:intergenic
TTCTTGAAATTCAAGGAACT+TGG 0.447012 7:+70358142 None:intergenic
TTTGCAAAAGTCCAATTGCC+TGG 0.448086 7:-70358182 MsG0780039912.01.T01:CDS
CCTGGGTCCATTGCACTGTT+GGG 0.454525 7:+70358427 None:intergenic
AAGAACACAGATACCACCTT+TGG 0.455443 7:+70363078 None:intergenic
ATCATAGCTAACATCGATTC+AGG 0.456627 7:-70362950 MsG0780039912.01.T01:intron
TAGGTTGCAACTCTAGCTCT+TGG 0.461146 7:+70361037 None:intergenic
CCTAGGTCATAAACAAGTCC+TGG 0.461631 7:+70358409 None:intergenic
TCAAAGAAACTTCATGCAAC+AGG 0.463997 7:-70361543 MsG0780039912.01.T01:intron
TCATATAATAAACAGATCAA+TGG 0.465118 7:-70363263 MsG0780039912.01.T01:five_prime_UTR
GAGAAGATGTAGCAGTTTCA+AGG 0.469008 7:+70363445 None:intergenic
ACACCGGGCGCCGTTACATC+AGG 0.469665 7:+70359427 None:intergenic
GTCGCTAAAACTCTTCGATT+CGG 0.470558 7:+70361635 None:intergenic
TCAGGGTCAAGAAGCTAAAT+CGG 0.471069 7:-70360004 MsG0780039912.01.T01:five_prime_UTR
ATATTTGGTAATGTGATTGA+AGG 0.474775 7:+70358265 None:intergenic
CAGCCTGATGTAACGGCGCC+CGG 0.476551 7:-70359430 MsG0780039912.01.T01:CDS
TGCACTTGCAAACAATGAAT+AGG 0.477779 7:+70359390 None:intergenic
CCAGGACTTGTTTATGACCT+AGG 0.481515 7:-70358409 MsG0780039912.01.T01:CDS
CTCGTATAGTCACCAATGTT+GGG 0.482371 7:-70358219 MsG0780039912.01.T01:CDS
GGAGAACTGCAATGGACAAA+TGG 0.483947 7:-70358046 MsG0780039912.01.T01:CDS
AAGAAAGCCAGCTCCAGTTA+TGG 0.487825 7:-70359626 MsG0780039912.01.T01:CDS
AGCTAAATCGGCAAGAGCAA+AGG 0.489923 7:-70359992 MsG0780039912.01.T01:five_prime_UTR
CGTGCTGTTTGTTGCGAACG+AGG 0.491310 7:+70361164 None:intergenic
GCTAAATCGGCAAGAGCAAA+GGG 0.491366 7:-70359991 MsG0780039912.01.T01:five_prime_UTR
TGTCCTGAACCATAAGCAAA+TGG 0.492197 7:+70358457 None:intergenic
GTTGCATCTGCTGGAAATGA+TGG 0.500160 7:-70360826 MsG0780039912.01.T01:five_prime_UTR
TGTTACTAATGTTGCTCCAT+GGG 0.500288 7:-70360790 MsG0780039912.01.T01:five_prime_UTR
CTGGAAATGATGGACCAACC+TGG 0.505493 7:-70360816 MsG0780039912.01.T01:five_prime_UTR
CAGGACTTGTTTATGACCTA+GGG 0.508407 7:-70358408 MsG0780039912.01.T01:CDS
TAACCAGTCTTTCACTCTAG+TGG 0.508663 7:-70360561 MsG0780039912.01.T01:five_prime_UTR
TGTCTTGCCCTCATGTTGCT+GGG 0.508905 7:-70359306 MsG0780039912.01.T01:CDS
CCGTGACAGTTTGTTACCAA+TGG 0.510820 7:+70360716 None:intergenic
GTGTTACTAATGTTGCTCCA+TGG 0.513688 7:-70360791 MsG0780039912.01.T01:five_prime_UTR
AGCAGTTTCAAGGTCAATAG+AGG 0.514083 7:+70363455 None:intergenic
CGCATCTCGATTTGTCACAT+TGG 0.514200 7:+70360517 None:intergenic
TTAACAAGAGGACATAGTAT+AGG 0.518469 7:-70359876 MsG0780039912.01.T01:five_prime_UTR
CAAATGGAAAGCATATTGTA+AGG 0.521262 7:-70358030 MsG0780039912.01.T01:CDS
TTCAAGGTCAATAGAGGAAG+GGG 0.521481 7:+70363461 None:intergenic
TATGAAGCCATAACTGGAGC+TGG 0.522115 7:+70359619 None:intergenic
TCAAGTAATCCTTAATCCCT+AGG 0.522854 7:+70358392 None:intergenic
TTTGTTTCAGCCTGATGTAA+CGG 0.526895 7:-70359437 MsG0780039912.01.T01:intron
TATCAACTCAGCTTGGCAAA+AGG 0.529226 7:-70362992 MsG0780039912.01.T01:five_prime_UTR
ACTCGTATAGTCACCAATGT+TGG 0.529854 7:-70358220 MsG0780039912.01.T01:CDS
CTTGTTGGTGTTATCTCTTG+TGG 0.532291 7:+70358516 None:intergenic
CAATTCCAGCAAAATGGCGT+GGG 0.534400 7:-70361599 MsG0780039912.01.T01:five_prime_UTR
ACTAGAGTGAAAGACTGGTT+AGG 0.537957 7:+70360563 None:intergenic
TACTGGGTTCAATCTTGGGA+AGG 0.541104 7:-70363413 MsG0780039912.01.T01:intron
CAGTGTTACATTGTATACTT+GGG 0.543630 7:-70363504 MsG0780039912.01.T01:five_prime_UTR
TTCCCATTCAATGTAATGCA+AGG 0.545135 7:-70359337 MsG0780039912.01.T01:CDS
CAGGTGCAGCATATTTGGTA+TGG 0.546460 7:-70361085 MsG0780039912.01.T01:five_prime_UTR
AAAGCATATGAACGTGATAA+CGG 0.548391 7:-70361194 MsG0780039912.01.T01:five_prime_UTR
ACCAATTTGGAGAACTGCAA+TGG 0.549150 7:-70358054 MsG0780039912.01.T01:CDS
AATTCAGCCATCAATACTAA+AGG 0.549273 7:-70359575 MsG0780039912.01.T01:intron
TCTTCTCATTATGATTTACT+GGG 0.550509 7:-70363429 MsG0780039912.01.T01:five_prime_UTR
AACTCAGCTTGGCAAAAGGA+AGG 0.550702 7:-70362988 MsG0780039912.01.T01:five_prime_UTR
AAGCAACAAGTGTGACTCCA+AGG 0.551446 7:-70358084 MsG0780039912.01.T01:CDS
CTTGATCCTTCTAAAGCAAG+TGG 0.551880 7:-70360351 MsG0780039912.01.T01:five_prime_UTR
TTTCACTCTAGTGGATTCTA+CGG 0.562821 7:-70360552 MsG0780039912.01.T01:five_prime_UTR
GTTTCAAGGTCAATAGAGGA+AGG 0.562899 7:+70363459 None:intergenic
GCATGTGGAAACTTCGTACC+AGG 0.563077 7:-70361104 MsG0780039912.01.T01:five_prime_UTR
AATCCACTAGAGTGAAAGAC+TGG 0.563936 7:+70360558 None:intergenic
TAGTGGCGTGTGTTCGAGAA+GGG 0.565122 7:-70360323 MsG0780039912.01.T01:five_prime_UTR
ATTGATGGCTGAATTTCACT+TGG 0.567441 7:+70359583 None:intergenic
TGGCAAGTTTACAAATAGAC+TGG 0.568946 7:+70360586 None:intergenic
TCCATAAGTTCAGTTGCTCA+GGG 0.569952 7:-70360021 MsG0780039912.01.T01:intron
CCAATTCCAGCAAAATGGCG+TGG 0.570080 7:-70361600 MsG0780039912.01.T01:five_prime_UTR
TTCAGCAGTACTATGACCAT+TGG 0.573655 7:-70360732 MsG0780039912.01.T01:five_prime_UTR
CAAATGATATCAACTCAGCT+TGG 0.575551 7:-70362999 MsG0780039912.01.T01:five_prime_UTR
ATAGCTGATTTAATAGCCGC+AGG 0.576830 7:+70359244 None:intergenic
CTAGGTCATAAACAAGTCCT+GGG 0.579565 7:+70358410 None:intergenic
AGCAACAAGTGTGACTCCAA+GGG 0.583540 7:-70358083 MsG0780039912.01.T01:CDS
GACAAGCATCAATTAACAAG+AGG 0.583591 7:-70359888 MsG0780039912.01.T01:five_prime_UTR
TGTCAAATTAACAAACTCAA+AGG 0.583636 7:-70361567 MsG0780039912.01.T01:five_prime_UTR
ATAGTGGCGTGTGTTCGAGA+AGG 0.586353 7:-70360324 MsG0780039912.01.T01:five_prime_UTR
CAGCATATTTGGTATGGCAA+TGG 0.588845 7:-70361079 MsG0780039912.01.T01:five_prime_UTR
CATTAGTAACACTTCCAGGT+TGG 0.590251 7:+70360802 None:intergenic
AAAATTGATGAAATAACAGA+AGG 0.591488 7:+70357925 None:intergenic
TATTCAACCCAACAGTGCAA+TGG 0.598990 7:-70358434 MsG0780039912.01.T01:CDS
TTTCAAGGTCAATAGAGGAA+GGG 0.599454 7:+70363460 None:intergenic
GCAGCAACTGTGAATACCCA+TGG 0.603326 7:+70360774 None:intergenic
CATACCAAATATGCTGCACC+TGG 0.604332 7:+70361086 None:intergenic
GGCTGCAAGTATGTTCACAC+CGG 0.606481 7:+70359411 None:intergenic
CTTGCTTTAGAAGGATCAAG+TGG 0.609734 7:+70360354 None:intergenic
CCAGCAGTCCCAGCAACATG+AGG 0.615901 7:+70359298 None:intergenic
GGCAATGGTACTGTAAAAGG+TGG 0.617624 7:-70361064 MsG0780039912.01.T01:five_prime_UTR
AAATCAGCTATCATGACCAC+CGG 0.620394 7:-70359232 MsG0780039912.01.T01:intron
AGTACTATTACAGATTCTCA+AGG 0.622986 7:-70360909 MsG0780039912.01.T01:five_prime_UTR
GCACGTGACTTTGTAGGCCA+CGG 0.623264 7:-70361146 MsG0780039912.01.T01:five_prime_UTR
CCCAACAGTGCAATGGACCC+AGG 0.625551 7:-70358427 MsG0780039912.01.T01:CDS
CCTATATGCAGAAAATCCAA+AGG 0.629857 7:-70363094 MsG0780039912.01.T01:intron
CAGCAGTCCCAGCAACATGA+GGG 0.631088 7:+70359299 None:intergenic
ATGGCTTCATACTCATCTAG+AGG 0.632404 7:-70359607 MsG0780039912.01.T01:CDS
AGGTCAATAGAGGAAGGGGT+TGG 0.633028 7:+70363465 None:intergenic
AAACCTCGACGATTGTCTGT+TGG 0.633358 7:+70359358 None:intergenic
AATTCCAGCAAAATGGCGTG+GGG 0.638524 7:-70361598 MsG0780039912.01.T01:five_prime_UTR
AGAGTGAAAGACTGGTTAGG+TGG 0.647696 7:+70360566 None:intergenic
TCATCTGAATTGGAGTCCTG+CGG 0.650874 7:-70359260 MsG0780039912.01.T01:CDS
GCTGCAAGTATGTTCACACC+GGG 0.652846 7:+70359412 None:intergenic
AGTGGCGTGTGTTCGAGAAG+GGG 0.653022 7:-70360322 MsG0780039912.01.T01:five_prime_UTR
ATGTACTGGTGGCCCAACAT+TGG 0.656687 7:+70358207 None:intergenic
TACTTGGGAGCACATTCACA+TGG 0.657270 7:-70363489 MsG0780039912.01.T01:five_prime_UTR
GCAACAAGTGTGACTCCAAG+GGG 0.669485 7:-70358082 MsG0780039912.01.T01:CDS
CATACACTATCAACAGCATG+TGG 0.670621 7:-70361119 MsG0780039912.01.T01:five_prime_UTR
ATATGCAGAAAATCCAAAGG+TGG 0.670832 7:-70363091 MsG0780039912.01.T01:intron
CCATTGGTAACAAACTGTCA+CGG 0.674738 7:-70360716 MsG0780039912.01.T01:intron
TTGATAGTAGACAAAACATG+AGG 0.676401 7:+70359918 None:intergenic
ATTGAGCAAGCCATTAGTGA+TGG 0.685160 7:-70360963 MsG0780039912.01.T01:five_prime_UTR
AGAGTTGCAACCTACAAGTG+TGG 0.687523 7:-70361028 MsG0780039912.01.T01:five_prime_UTR
ATTCCAGCAAAATGGCGTGG+GGG 0.708593 7:-70361597 MsG0780039912.01.T01:five_prime_UTR
TTGATAGTGTATGCGTACCG+TGG 0.721153 7:+70361129 None:intergenic
TTACCAACAGACAATCGTCG+AGG 0.726503 7:-70359361 MsG0780039912.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTGTAATCTTAAAATAAAT+TGG + Chr7:70360038-70360057 None:intergenic 15.0%
!! ATCATATATAACAATTGTAT+AGG - Chr7:70362839-70362858 MsG0780039912.01.T01:intron 15.0%
!! ATGATTTCATATATATGATT+AGG + Chr7:70362375-70362394 None:intergenic 15.0%
!! TAATTTACTTTGAATAGTTT+AGG + Chr7:70359756-70359775 None:intergenic 15.0%
!! TATACAATCATAATTGATAT+TGG - Chr7:70362270-70362289 MsG0780039912.01.T01:intron 15.0%
!! TTGTAATAATTAAATCAAGT+TGG - Chr7:70359569-70359588 MsG0780039912.01.T01:intron 15.0%
!! TTTAAATTAATTTCATCTAC+AGG - Chr7:70361367-70361386 MsG0780039912.01.T01:intron 15.0%
!!! ATTAAATAAACGATTTTGAT+TGG + Chr7:70358557-70358576 None:intergenic 15.0%
!!! CTAAAATAGAAATACAATTT+TGG + Chr7:70359270-70359289 None:intergenic 15.0%
!!! CTTTTTTTTTTTTGTATTCA+AGG - Chr7:70358866-70358885 MsG0780039912.01.T01:intron 15.0%
!!! GAATTTAATGTGTTATTATT+GGG - Chr7:70363474-70363493 MsG0780039912.01.T01:five_prime_UTR 15.0%
!!! TGAATTTAATGTGTTATTAT+TGG - Chr7:70363473-70363492 MsG0780039912.01.T01:five_prime_UTR 15.0%
!! AAAATTGATGAAATAACAGA+AGG + Chr7:70363513-70363532 None:intergenic 20.0%
!! ACAACATTTAAACCAATATT+TGG + Chr7:70363188-70363207 None:intergenic 20.0%
!! ACACATTAAATTCAACTATT+TGG + Chr7:70363467-70363486 None:intergenic 20.0%
!! ACATATAGTTAATAATTACG+TGG + Chr7:70361593-70361612 None:intergenic 20.0%
!! ACTAAATACATAAGAATCTT+TGG - Chr7:70358812-70358831 MsG0780039912.01.T01:intron 20.0%
!! ATTATAAATTAATGGCGAAT+AGG + Chr7:70359332-70359351 None:intergenic 20.0%
!! ATTCATCATTTATTCGATAA+TGG - Chr7:70361181-70361200 MsG0780039912.01.T01:five_prime_UTR 20.0%
!! CTTAGATTAATTAACCTATA+TGG - Chr7:70359428-70359447 MsG0780039912.01.T01:CDS 20.0%
!! GACTATTATCAAGATTATAT+AGG - Chr7:70362332-70362351 MsG0780039912.01.T01:intron 20.0%
!! GATTGATTAACTAATATGTA+TGG - Chr7:70358107-70358126 MsG0780039912.01.T01:CDS 20.0%
!! TAACACTGTAAATGATAAAT+AGG + Chr7:70357919-70357938 None:intergenic 20.0%
!! TACATGATTTCACTAAAAAA+AGG + Chr7:70361619-70361638 None:intergenic 20.0%
!! TACTACAAAGAAAACATTAT+CGG - Chr7:70358702-70358721 MsG0780039912.01.T01:intron 20.0%
!! TCACTGAGATTATAAATTAA+TGG + Chr7:70359340-70359359 None:intergenic 20.0%
!! TCATATAATAAACAGATCAA+TGG - Chr7:70358172-70358191 MsG0780039912.01.T01:CDS 20.0%
!! TTATCGAATAAATGATGAAT+AGG + Chr7:70361181-70361200 None:intergenic 20.0%
!! TTCATCATTTATTCGATAAT+GGG - Chr7:70361182-70361201 MsG0780039912.01.T01:five_prime_UTR 20.0%
!! TTTCCAACTTTATATTACTA+GGG - Chr7:70360824-70360843 MsG0780039912.01.T01:five_prime_UTR 20.0%
!! TTTGTAAAGAAAAATTCTGT+TGG + Chr7:70360956-70360975 None:intergenic 20.0%
!!! AAACTGTATTTAGTTTAACA+AGG + Chr7:70358839-70358858 None:intergenic 20.0%
!!! AAATTGGAGAAAGATTATTT+TGG + Chr7:70360022-70360041 None:intergenic 20.0%
!!! ACACACAAATTTGTTTTTAA+GGG - Chr7:70359141-70359160 MsG0780039912.01.T01:intron 20.0%
!!! ACTTATGGAAAATTTTTTCT+TGG + Chr7:70361403-70361422 None:intergenic 20.0%
!!! TTCATCTTCTATTTTAACAT+AGG + Chr7:70362583-70362602 None:intergenic 20.0%
!!! TTTATTTGAAATTTGCGAAA+GGG - Chr7:70359525-70359544 MsG0780039912.01.T01:intron 20.0%
! AATCATCATCAACATAGATT+TGG - Chr7:70360793-70360812 MsG0780039912.01.T01:five_prime_UTR 25.0%
! AATGTTGAAGAGGATAAAAT+TGG - Chr7:70362478-70362497 MsG0780039912.01.T01:intron 25.0%
! ATCTTCTCATTATGATTTAC+TGG - Chr7:70358005-70358024 MsG0780039912.01.T01:CDS 25.0%
! CAATGATACGCATATAAAAA+AGG + Chr7:70361038-70361057 None:intergenic 25.0%
! CTTATGCACAACAATTAATA+AGG - Chr7:70359975-70359994 MsG0780039912.01.T01:five_prime_UTR 25.0%
! CTTATTAATTGTTGTGCATA+AGG + Chr7:70359977-70359996 None:intergenic 25.0%
! CTTTCCAACTTTATATTACT+AGG - Chr7:70360823-70360842 MsG0780039912.01.T01:five_prime_UTR 25.0%
! CTTTCGCAAATTTCAAATAA+AGG + Chr7:70359526-70359545 None:intergenic 25.0%
! TATAGAGCATAGAATTATTG+TGG + Chr7:70358530-70358549 None:intergenic 25.0%
! TATTCTAATCAGATTCAAAG+AGG + Chr7:70360091-70360110 None:intergenic 25.0%
! TCAATCACATTACCAAATAT+TGG - Chr7:70363173-70363192 MsG0780039912.01.T01:intron 25.0%
! TCCTATTACATAACTCTTTA+CGG - Chr7:70360057-70360076 MsG0780039912.01.T01:intron 25.0%
! TCCTTGAATTTCAAGAAAAT+AGG - Chr7:70363299-70363318 MsG0780039912.01.T01:intron 25.0%
! TCTTCTCATTATGATTTACT+GGG - Chr7:70358006-70358025 MsG0780039912.01.T01:CDS 25.0%
! TGTCAAATTAACAAACTCAA+AGG - Chr7:70359868-70359887 MsG0780039912.01.T01:five_prime_UTR 25.0%
! TTGAAGGATATGATTTCAAT+AGG - Chr7:70360553-70360572 MsG0780039912.01.T01:five_prime_UTR 25.0%
!! AAATTATCCTTGTTTGCATT+AGG - Chr7:70359770-70359789 MsG0780039912.01.T01:intron 25.0%
!! ACCTATTTTCTTGAAATTCA+AGG + Chr7:70363303-70363322 None:intergenic 25.0%
!! ATGAGATGTTAACTTTTGAT+TGG + Chr7:70358940-70358959 None:intergenic 25.0%
!! CTATTTTATACTCTTTATGC+TGG + Chr7:70358673-70358692 None:intergenic 25.0%
!! CTTTATTTGAAATTTGCGAA+AGG - Chr7:70359524-70359543 MsG0780039912.01.T01:intron 25.0%
!! TATTTGCTTTCTTTGAGAAT+AGG + Chr7:70361286-70361305 None:intergenic 25.0%
!!! AATGTTTGCTATTGAACAAT+TGG - Chr7:70359385-70359404 MsG0780039912.01.T01:CDS 25.0%
!!! ATATTTGGTAATGTGATTGA+AGG + Chr7:70363173-70363192 None:intergenic 25.0%
!!! CTGTCTTTATTTCTATTCAA+TGG - Chr7:70361944-70361963 MsG0780039912.01.T01:intron 25.0%
!!! GACACACAAATTTGTTTTTA+AGG - Chr7:70359140-70359159 MsG0780039912.01.T01:intron 25.0%
AAACATTATCCCAACATTGA+TGG + Chr7:70359372-70359391 None:intergenic 30.0%
AAAGCATATGAACGTGATAA+CGG - Chr7:70360241-70360260 MsG0780039912.01.T01:intron 30.0%
AACATGACATTTACTTGTTC+AGG - Chr7:70363119-70363138 MsG0780039912.01.T01:intron 30.0%
ACAGTGTTACATTGTATACT+TGG - Chr7:70357930-70357949 MsG0780039912.01.T01:three_prime_UTR 30.0%
AGTACTATTACAGATTCTCA+AGG - Chr7:70360526-70360545 MsG0780039912.01.T01:five_prime_UTR 30.0%
CAGTGTTACATTGTATACTT+GGG - Chr7:70357931-70357950 MsG0780039912.01.T01:three_prime_UTR 30.0%
CTCACATTTATCACTAGATT+TGG - Chr7:70362540-70362559 MsG0780039912.01.T01:intron 30.0%
GAGAAATCAACAAGAATCAA+TGG - Chr7:70361476-70361495 MsG0780039912.01.T01:intron 30.0%
GAGCAAGTAAAATATTGCAA+TGG + Chr7:70358069-70358088 None:intergenic 30.0%
GATAATAAGTGTGATTGTAG+AGG + Chr7:70362810-70362829 None:intergenic 30.0%
GATATAATCTCACTTTCTCT+TGG - Chr7:70360499-70360518 MsG0780039912.01.T01:intron 30.0%
TAAAGCAAGTGGAAAAATAG+TGG - Chr7:70361095-70361114 MsG0780039912.01.T01:five_prime_UTR 30.0%
TAGTCACATGACTAACTAAT+AGG - Chr7:70358902-70358921 MsG0780039912.01.T01:intron 30.0%
TATATCAACACCATCACTAA+TGG + Chr7:70360485-70360504 None:intergenic 30.0%
TCAAAACACTTCATCTGAAT+TGG - Chr7:70362165-70362184 MsG0780039912.01.T01:intron 30.0%
TTAACAAGAGGACATAGTAT+AGG - Chr7:70361559-70361578 MsG0780039912.01.T01:five_prime_UTR 30.0%
TTCATTGATCAATGTTGAAG+AGG - Chr7:70362468-70362487 MsG0780039912.01.T01:intron 30.0%
TTCCTTGCATTACATTGAAT+GGG + Chr7:70362103-70362122 None:intergenic 30.0%
TTCTTGAAATTCAAGGAACT+TGG + Chr7:70363296-70363315 None:intergenic 30.0%
! AGATTCTCAAGGAATTTTGA+AGG - Chr7:70360537-70360556 MsG0780039912.01.T01:five_prime_UTR 30.0%
! ATTTTATTAGTTGCATCTGC+TGG - Chr7:70360600-70360619 MsG0780039912.01.T01:intron 30.0%
! CAAATGGAAAGCATATTGTA+AGG - Chr7:70363405-70363424 MsG0780039912.01.T01:intron 30.0%
! GAATGAGATCACATTAGTTT+AGG + Chr7:70361313-70361332 None:intergenic 30.0%
! GACTTTTGCAAAATATGTAC+TGG + Chr7:70363245-70363264 None:intergenic 30.0%
! TATCACTAGATTTGGTCATT+TGG - Chr7:70362548-70362567 MsG0780039912.01.T01:intron 30.0%
! TGTTCTTATGACACTTGTTA+TGG + Chr7:70359296-70359315 None:intergenic 30.0%
! TTGATAGTAGACAAAACATG+AGG + Chr7:70361520-70361539 None:intergenic 30.0%
! TTTTCGAATGCATCACTTAT+AGG + Chr7:70362945-70362964 None:intergenic 30.0%
! TTTTGCAAAATATGTACTGG+TGG + Chr7:70363242-70363261 None:intergenic 30.0%
!! AATTAAATCAAGTTGGTCAC+AGG - Chr7:70359576-70359595 MsG0780039912.01.T01:CDS 30.0%
!! ATTTTTCCACTTGCTTTAGA+AGG + Chr7:70361093-70361112 None:intergenic 30.0%
!!! TTTTTGGTTGATAGCAAGAA+GGG + Chr7:70361650-70361669 None:intergenic 30.0%
!!! TTTTTTGGTTGATAGCAAGA+AGG + Chr7:70361651-70361670 None:intergenic 30.0%
AAACTGTCACGGTAATATTC+TGG - Chr7:70360730-70360749 MsG0780039912.01.T01:five_prime_UTR 35.0%
AATCAGTAGAAAATCGAGGT+AGG - Chr7:70359049-70359068 MsG0780039912.01.T01:intron 35.0%
AATCCATTTGCTTATGGTTC+AGG - Chr7:70362975-70362994 MsG0780039912.01.T01:five_prime_UTR 35.0%
ACTGCAAATCCATTTGCTTA+TGG - Chr7:70362969-70362988 MsG0780039912.01.T01:five_prime_UTR 35.0%
ACTTGATAGACCATCAATGT+TGG - Chr7:70359359-70359378 MsG0780039912.01.T01:CDS 35.0%
AGAAGATGAAACTCCATTGA+TGG - Chr7:70362593-70362612 MsG0780039912.01.T01:intron 35.0%
AGTGAGTAACAGAATTAGCA+TGG - Chr7:70358238-70358257 MsG0780039912.01.T01:CDS 35.0%
ATATGCAGAAAATCCAAAGG+TGG - Chr7:70358344-70358363 MsG0780039912.01.T01:CDS 35.0%
ATCAGTAGAAAATCGAGGTA+GGG - Chr7:70359050-70359069 MsG0780039912.01.T01:intron 35.0%
CAAATGATATCAACTCAGCT+TGG - Chr7:70358436-70358455 MsG0780039912.01.T01:CDS 35.0%
CATTTGCGTTGAACAGTAAT+GGG + Chr7:70363434-70363453 None:intergenic 35.0%
CCTATATGCAGAAAATCCAA+AGG - Chr7:70358341-70358360 MsG0780039912.01.T01:CDS 35.0%
CTACAAAATGTTTGTGACAG+TGG + Chr7:70358266-70358285 None:intergenic 35.0%
CTTGATAGACCATCAATGTT+GGG - Chr7:70359360-70359379 MsG0780039912.01.T01:CDS 35.0%
GACAAGCATCAATTAACAAG+AGG - Chr7:70361547-70361566 MsG0780039912.01.T01:five_prime_UTR 35.0%
GAGAAATCAGTAGAAAATCG+AGG - Chr7:70359045-70359064 MsG0780039912.01.T01:intron 35.0%
GATTTACTGGGTTCAATCTT+GGG - Chr7:70358018-70358037 MsG0780039912.01.T01:CDS 35.0%
GCCGTAAAGAGTTATGTAAT+AGG + Chr7:70360061-70360080 None:intergenic 35.0%
GCTCCCTAGTAATATAAAGT+TGG + Chr7:70360830-70360849 None:intergenic 35.0%
GTTAGAAAACAGCTAACAAG+CGG - Chr7:70362757-70362776 MsG0780039912.01.T01:intron 35.0%
GTTCCTTGCATTACATTGAA+TGG + Chr7:70362104-70362123 None:intergenic 35.0%
GTTGAAGAGGATAAAATTGG+TGG - Chr7:70362481-70362500 MsG0780039912.01.T01:intron 35.0%
TATGGCAATGGTACTGTAAA+AGG - Chr7:70360368-70360387 MsG0780039912.01.T01:five_prime_UTR 35.0%
TCAAAGAAACTTCATGCAAC+AGG - Chr7:70359892-70359911 MsG0780039912.01.T01:five_prime_UTR 35.0%
TCAAGTAATCCTTAATCCCT+AGG + Chr7:70363046-70363065 None:intergenic 35.0%
TCACAAGCAAAAACACTCAT+TGG - Chr7:70361786-70361805 MsG0780039912.01.T01:intron 35.0%
TCATTTGCGTTGAACAGTAA+TGG + Chr7:70363435-70363454 None:intergenic 35.0%
TGAATCGATGTTAGCTATGA+TGG + Chr7:70358486-70358505 None:intergenic 35.0%
TGATTTACTGGGTTCAATCT+TGG - Chr7:70358017-70358036 MsG0780039912.01.T01:CDS 35.0%
TGCACTTGCAAACAATGAAT+AGG + Chr7:70362048-70362067 None:intergenic 35.0%
TGGCAAGTTTACAAATAGAC+TGG + Chr7:70360852-70360871 None:intergenic 35.0%
TGTGATTGTAGAGGTTACTT+GGG + Chr7:70362801-70362820 None:intergenic 35.0%
TGTTACTAATGTTGCTCCAT+GGG - Chr7:70360645-70360664 MsG0780039912.01.T01:intron 35.0%
TGTTTATGACCTAGGGATTA+AGG - Chr7:70363034-70363053 MsG0780039912.01.T01:five_prime_UTR 35.0%
TTCCCATTCAATGTAATGCA+AGG - Chr7:70362098-70362117 MsG0780039912.01.T01:intron 35.0%
TTGAACTTCTTATGTGCTTC+TGG - Chr7:70363062-70363081 MsG0780039912.01.T01:five_prime_UTR 35.0%
TTGCACTACATAAACAAACC+AGG - Chr7:70360193-70360212 MsG0780039912.01.T01:intron 35.0%
TTTCAAGGTCAATAGAGGAA+GGG + Chr7:70357978-70357997 None:intergenic 35.0%
TTTGTTTCAGCCTGATGTAA+CGG - Chr7:70361998-70362017 MsG0780039912.01.T01:intron 35.0%
! AGCAATTTTATCCAGGCAAT+TGG + Chr7:70363267-70363286 None:intergenic 35.0%
! ATTTGAAATTTGCGAAAGGG+AGG - Chr7:70359528-70359547 MsG0780039912.01.T01:intron 35.0%
! CCTTTGGATTTTCTGCATAT+AGG + Chr7:70358344-70358363 None:intergenic 35.0%
! CTTTGAGAATAGGTGGTTTA+GGG + Chr7:70361276-70361295 None:intergenic 35.0%
! GTACAACAGCAATTTTATCC+AGG + Chr7:70363274-70363293 None:intergenic 35.0%
! TAAGTGCTGTAATGAGTTGT+TGG + Chr7:70363094-70363113 None:intergenic 35.0%
! TCTTTGAGAATAGGTGGTTT+AGG + Chr7:70361277-70361296 None:intergenic 35.0%
! TTGCTTTCTTTGAGAATAGG+TGG + Chr7:70361283-70361302 None:intergenic 35.0%
! TTGTTGCTGTTGTTTGGATA+TGG - Chr7:70363537-70363556 MsG0780039912.01.T01:five_prime_UTR 35.0%
! TTGTTGTTGTTGCTGTTGTT+TGG - Chr7:70363531-70363550 MsG0780039912.01.T01:five_prime_UTR 35.0%
!! ATCATAGCTAACATCGATTC+AGG - Chr7:70358485-70358504 MsG0780039912.01.T01:CDS 35.0%
!! TTGACATCTGGAGTATTGTT+TGG - Chr7:70361153-70361172 MsG0780039912.01.T01:five_prime_UTR 35.0%
!! TTTCACTCTAGTGGATTCTA+CGG - Chr7:70360883-70360902 MsG0780039912.01.T01:five_prime_UTR 35.0%
AAACTGACCAATCTGTTGGT+TGG - Chr7:70358785-70358804 MsG0780039912.01.T01:intron 40.0%
AAATCAGCTATCATGACCAC+CGG - Chr7:70362203-70362222 MsG0780039912.01.T01:intron 40.0%
AAGAACACAGATACCACCTT+TGG + Chr7:70358360-70358379 None:intergenic 40.0%
AATCCACTAGAGTGAAAGAC+TGG + Chr7:70360880-70360899 None:intergenic 40.0%
ACACGTTCTTGGGAATTTCT+TGG - Chr7:70358405-70358424 MsG0780039912.01.T01:CDS 40.0%
ACCAATTTGGAGAACTGCAA+TGG - Chr7:70363381-70363400 MsG0780039912.01.T01:intron 40.0%
ACTCGTATAGTCACCAATGT+TGG - Chr7:70363215-70363234 MsG0780039912.01.T01:intron 40.0%
ACTTCGAACACTTTGACATC+TGG - Chr7:70361141-70361160 MsG0780039912.01.T01:five_prime_UTR 40.0%
AGCAGTTTCAAGGTCAATAG+AGG + Chr7:70357983-70358002 None:intergenic 40.0%
AGTTGAACCAACCAACAGAT+TGG + Chr7:70358795-70358814 None:intergenic 40.0%
ATGGCTTCATACTCATCTAG+AGG - Chr7:70361828-70361847 MsG0780039912.01.T01:intron 40.0%
ATTGAGCAAGCCATTAGTGA+TGG - Chr7:70360472-70360491 MsG0780039912.01.T01:intron 40.0%
CAGCATATTTGGTATGGCAA+TGG - Chr7:70360356-70360375 MsG0780039912.01.T01:five_prime_UTR 40.0%
CATACACTATCAACAGCATG+TGG - Chr7:70360316-70360335 MsG0780039912.01.T01:five_prime_UTR 40.0%
CATTAGTAACACTTCCAGGT+TGG + Chr7:70360636-70360655 None:intergenic 40.0%
CCAAGGGGAAAATACCAATT+TGG - Chr7:70363368-70363387 MsG0780039912.01.T01:intron 40.0%
CTAGGTCATAAACAAGTCCT+GGG + Chr7:70363028-70363047 None:intergenic 40.0%
CTCGTATAGTCACCAATGTT+GGG - Chr7:70363216-70363235 MsG0780039912.01.T01:intron 40.0%
GAAGCTTTCTCTTCCATCAA+TGG + Chr7:70362609-70362628 None:intergenic 40.0%
GAGAAGATGTAGCAGTTTCA+AGG + Chr7:70357993-70358012 None:intergenic 40.0%
GATGAGTATGAAGCCATAAC+TGG + Chr7:70361825-70361844 None:intergenic 40.0%
GCAACATTAGTAACACTTCC+AGG + Chr7:70360640-70360659 None:intergenic 40.0%
GTAGAGTGAGAGAGAAATAC+CGG + Chr7:70362225-70362244 None:intergenic 40.0%
GTCGCTAAAACTCTTCGATT+CGG + Chr7:70359803-70359822 None:intergenic 40.0%
GTGTGATTGTAGAGGTTACT+TGG + Chr7:70362802-70362821 None:intergenic 40.0%
GTTTCAAGGTCAATAGAGGA+AGG + Chr7:70357979-70357998 None:intergenic 40.0%
TAACCAGTCTTTCACTCTAG+TGG - Chr7:70360874-70360893 MsG0780039912.01.T01:five_prime_UTR 40.0%
TATCAACTCAGCTTGGCAAA+AGG - Chr7:70358443-70358462 MsG0780039912.01.T01:CDS 40.0%
TATTCAACCCAACAGTGCAA+TGG - Chr7:70363001-70363020 MsG0780039912.01.T01:five_prime_UTR 40.0%
TCAGGGTCAAGAAGCTAAAT+CGG - Chr7:70361431-70361450 MsG0780039912.01.T01:intron 40.0%
TCAGTAGAAAATCGAGGTAG+GGG - Chr7:70359051-70359070 MsG0780039912.01.T01:intron 40.0%
TCCATAAGTTCAGTTGCTCA+GGG - Chr7:70361414-70361433 MsG0780039912.01.T01:intron 40.0%
TCCATTGCAGTTCTCCAAAT+TGG + Chr7:70363385-70363404 None:intergenic 40.0%
TGCATCACTTATAGGCTTGT+TGG + Chr7:70362937-70362956 None:intergenic 40.0%
TGTCCTGAACCATAAGCAAA+TGG + Chr7:70362981-70363000 None:intergenic 40.0%
TTCAAGGTCAATAGAGGAAG+GGG + Chr7:70357977-70357996 None:intergenic 40.0%
TTCAGCAGTACTATGACCAT+TGG - Chr7:70360703-70360722 MsG0780039912.01.T01:intron 40.0%
TTCCATAAGTTCAGTTGCTC+AGG - Chr7:70361413-70361432 MsG0780039912.01.T01:intron 40.0%
TTTGCAAAAGTCCAATTGCC+TGG - Chr7:70363253-70363272 MsG0780039912.01.T01:five_prime_UTR 40.0%
! ACTAGAGTGAAAGACTGGTT+AGG + Chr7:70360875-70360894 None:intergenic 40.0%
! ATAGCTGATTTAATAGCCGC+AGG + Chr7:70362194-70362213 None:intergenic 40.0%
! ATCTTGCTCAATTAGCTTCC+TGG + Chr7:70360214-70360233 None:intergenic 40.0%
! CAGGACTTGTTTATGACCTA+GGG - Chr7:70363027-70363046 MsG0780039912.01.T01:five_prime_UTR 40.0%
! CCAAATTGGTATTTTCCCCT+TGG + Chr7:70363371-70363390 None:intergenic 40.0%
! CCATTGGTAACAAACTGTCA+CGG - Chr7:70360719-70360738 MsG0780039912.01.T01:five_prime_UTR 40.0%
! CCTTGTTTGCATTAGGTGTT+GGG - Chr7:70359777-70359796 MsG0780039912.01.T01:intron 40.0%
! CGTGGTTTTTGTCTCCATAT+AGG + Chr7:70359445-70359464 None:intergenic 40.0%
! GTGTTACTAATGTTGCTCCA+TGG - Chr7:70360644-70360663 MsG0780039912.01.T01:intron 40.0%
! TCCTTGTTTGCATTAGGTGT+TGG - Chr7:70359776-70359795 MsG0780039912.01.T01:intron 40.0%
!! AGTTTTAGCGACAGAGGAAT+AGG - Chr7:70359811-70359830 MsG0780039912.01.T01:intron 40.0%
!! CTTGATCCTTCTAAAGCAAG+TGG - Chr7:70361084-70361103 MsG0780039912.01.T01:five_prime_UTR 40.0%
!! CTTGCTTTAGAAGGATCAAG+TGG + Chr7:70361084-70361103 None:intergenic 40.0%
!! CTTGTTGGTGTTATCTCTTG+TGG + Chr7:70362922-70362941 None:intergenic 40.0%
AAACCTCGACGATTGTCTGT+TGG + Chr7:70362080-70362099 None:intergenic 45.0%
AACCACGTGCTTTCTTTGAG+TGG - Chr7:70359458-70359477 MsG0780039912.01.T01:intron 45.0%
AACTCAGCTTGGCAAAAGGA+AGG - Chr7:70358447-70358466 MsG0780039912.01.T01:CDS 45.0%
AACTGCACACTACACGTTCT+TGG - Chr7:70358394-70358413 MsG0780039912.01.T01:CDS 45.0%
AAGAAAGCCAGCTCCAGTTA+TGG - Chr7:70361809-70361828 MsG0780039912.01.T01:intron 45.0%
AAGCAACAAGTGTGACTCCA+AGG - Chr7:70363351-70363370 MsG0780039912.01.T01:intron 45.0%
AATTCCAGCAAAATGGCGTG+GGG - Chr7:70359837-70359856 MsG0780039912.01.T01:intron 45.0%
ACCCTGAGCAACTGAACTTA+TGG + Chr7:70361418-70361437 None:intergenic 45.0%
ACTGCACACTACACGTTCTT+GGG - Chr7:70358395-70358414 MsG0780039912.01.T01:CDS 45.0%
AGAGTTGCAACCTACAAGTG+TGG - Chr7:70360407-70360426 MsG0780039912.01.T01:intron 45.0%
AGCAACAAGTGTGACTCCAA+GGG - Chr7:70363352-70363371 MsG0780039912.01.T01:intron 45.0%
AGCTAAATCGGCAAGAGCAA+AGG - Chr7:70361443-70361462 MsG0780039912.01.T01:intron 45.0%
AGCTTGGCAAAAGGAAGGTT+TGG - Chr7:70358452-70358471 MsG0780039912.01.T01:CDS 45.0%
ATTGTAGAGGTTACTTGGGC+AGG + Chr7:70362797-70362816 None:intergenic 45.0%
CAAACAGCACGTGACTTTGT+AGG - Chr7:70360283-70360302 MsG0780039912.01.T01:intron 45.0%
CAATTCCAGCAAAATGGCGT+GGG - Chr7:70359836-70359855 MsG0780039912.01.T01:intron 45.0%
CAGGTGCAGCATATTTGGTA+TGG - Chr7:70360350-70360369 MsG0780039912.01.T01:five_prime_UTR 45.0%
CAGTAGAAAATCGAGGTAGG+GGG - Chr7:70359052-70359071 MsG0780039912.01.T01:intron 45.0%
CATACCAAATATGCTGCACC+TGG + Chr7:70360352-70360371 None:intergenic 45.0%
CCCAACACCTAATGCAAACA+AGG + Chr7:70359780-70359799 None:intergenic 45.0%
CCTAGGTCATAAACAAGTCC+TGG + Chr7:70363029-70363048 None:intergenic 45.0%
GATGACTGCAAAGACAGAAG+CGG - Chr7:70359116-70359135 MsG0780039912.01.T01:intron 45.0%
GCTAAATCGGCAAGAGCAAA+GGG - Chr7:70361444-70361463 MsG0780039912.01.T01:intron 45.0%
GGAGAACTGCAATGGACAAA+TGG - Chr7:70363389-70363408 MsG0780039912.01.T01:intron 45.0%
GGCAATGGTACTGTAAAAGG+TGG - Chr7:70360371-70360390 MsG0780039912.01.T01:five_prime_UTR 45.0%
GTTGCATCTGCTGGAAATGA+TGG - Chr7:70360609-70360628 MsG0780039912.01.T01:intron 45.0%
TACTGGGTTCAATCTTGGGA+AGG - Chr7:70358022-70358041 MsG0780039912.01.T01:CDS 45.0%
TAGAAGGATCAAGTGGTTCC+TGG + Chr7:70361077-70361096 None:intergenic 45.0%
TAGGCCCAATTCCAGCAAAA+TGG - Chr7:70359830-70359849 MsG0780039912.01.T01:intron 45.0%
TATCTCTTGTGGTTGCTGCA+AGG + Chr7:70362911-70362930 None:intergenic 45.0%
TATGAAGCCATAACTGGAGC+TGG + Chr7:70361819-70361838 None:intergenic 45.0%
TCATCTGAATTGGAGTCCTG+CGG - Chr7:70362175-70362194 MsG0780039912.01.T01:intron 45.0%
TCTCTCTCACTCTACACACA+AGG - Chr7:70362230-70362249 MsG0780039912.01.T01:intron 45.0%
TTACCAACAGACAATCGTCG+AGG - Chr7:70362074-70362093 MsG0780039912.01.T01:intron 45.0%
! AGAGTGAAAGACTGGTTAGG+TGG + Chr7:70360872-70360891 None:intergenic 45.0%
! CCAACAGATTGGTCAGTTTC+CGG + Chr7:70358784-70358803 None:intergenic 45.0%
! CCAGGACTTGTTTATGACCT+AGG - Chr7:70363026-70363045 MsG0780039912.01.T01:five_prime_UTR 45.0%
! CGCATCTCGATTTGTCACAT+TGG + Chr7:70360921-70360940 None:intergenic 45.0%
! TACTTGGGAGCACATTCACA+TGG - Chr7:70357946-70357965 MsG0780039912.01.T01:three_prime_UTR 45.0%
! TGCAGACGATTTTGTAGACC+AGG - Chr7:70361056-70361075 MsG0780039912.01.T01:five_prime_UTR 45.0%
!! CACGCCATTTTGCTGGAATT+GGG + Chr7:70359837-70359856 None:intergenic 45.0%
!! CACTTTGAGACCACACTTGT+AGG + Chr7:70360420-70360439 None:intergenic 45.0%
!! CCGTGACAGTTTGTTACCAA+TGG + Chr7:70360722-70360741 None:intergenic 45.0%
!! TAGGTTGCAACTCTAGCTCT+TGG + Chr7:70360401-70360420 None:intergenic 45.0%
!! TCGAAGAGTTTTAGCGACAG+AGG - Chr7:70359805-70359824 MsG0780039912.01.T01:intron 45.0%
!! TTGATAGTGTATGCGTACCG+TGG + Chr7:70360309-70360328 None:intergenic 45.0%
!! AATAATAAAAATGATAAAAT+TGG + Chr7:70359613-70359632 None:intergenic 5.0%
!!! ATGAATAATTTTTTTTTTTT+TGG + Chr7:70361666-70361685 None:intergenic 5.0%
AGGTCAATAGAGGAAGGGGT+TGG + Chr7:70357973-70357992 None:intergenic 50.0%
ATAGTGGCGTGTGTTCGAGA+AGG - Chr7:70361111-70361130 MsG0780039912.01.T01:five_prime_UTR 50.0%
ATGTCTTGCCCTCATGTTGC+TGG - Chr7:70362128-70362147 MsG0780039912.01.T01:intron 50.0%
ATTCCAGCAAAATGGCGTGG+GGG - Chr7:70359838-70359857 MsG0780039912.01.T01:intron 50.0%
CCAATTCCAGCAAAATGGCG+TGG - Chr7:70359835-70359854 MsG0780039912.01.T01:intron 50.0%
CCGGAAACTGACCAATCTGT+TGG - Chr7:70358781-70358800 MsG0780039912.01.T01:intron 50.0%
CGAGAAATATAGCGACTGCC+AGG - Chr7:70358753-70358772 MsG0780039912.01.T01:intron 50.0%
CGTACCAGGTGCAGCATATT+TGG - Chr7:70360345-70360364 MsG0780039912.01.T01:five_prime_UTR 50.0%
GAAAATCGAGGTAGGGGGAA+TGG - Chr7:70359057-70359076 MsG0780039912.01.T01:intron 50.0%
GAGTGAGAGAGAAATACCGG+TGG + Chr7:70362222-70362241 None:intergenic 50.0%
GCAACAAGTGTGACTCCAAG+GGG - Chr7:70363353-70363372 MsG0780039912.01.T01:intron 50.0%
GCAGCAACTGTGAATACCCA+TGG + Chr7:70360664-70360683 None:intergenic 50.0%
GCATGTGGAAACTTCGTACC+AGG - Chr7:70360331-70360350 MsG0780039912.01.T01:five_prime_UTR 50.0%
GCTGCAAGTATGTTCACACC+GGG + Chr7:70362026-70362045 None:intergenic 50.0%
GGCTGCAAGTATGTTCACAC+CGG + Chr7:70362027-70362046 None:intergenic 50.0%
GTCATCATCATCGCTGCTTC+CGG + Chr7:70359102-70359121 None:intergenic 50.0%
TAGTGGCGTGTGTTCGAGAA+GGG - Chr7:70361112-70361131 MsG0780039912.01.T01:five_prime_UTR 50.0%
TGTCTTGCCCTCATGTTGCT+GGG - Chr7:70362129-70362148 MsG0780039912.01.T01:intron 50.0%
! ATGTACTGGTGGCCCAACAT+TGG + Chr7:70363231-70363250 None:intergenic 50.0%
! GTCCACTCAAAGAAAGCACG+TGG + Chr7:70359463-70359482 None:intergenic 50.0%
!! CCACGCCATTTTGCTGGAAT+TGG + Chr7:70359838-70359857 None:intergenic 50.0%
!! CTGGAAATGATGGACCAACC+TGG - Chr7:70360619-70360638 MsG0780039912.01.T01:intron 50.0%
AGTGGCGTGTGTTCGAGAAG+GGG - Chr7:70361113-70361132 MsG0780039912.01.T01:five_prime_UTR 55.0%
CAGCAGTCCCAGCAACATGA+GGG + Chr7:70362139-70362158 None:intergenic 55.0%
CCTGGGTCCATTGCACTGTT+GGG + Chr7:70363011-70363030 None:intergenic 55.0%
GCACGTGACTTTGTAGGCCA+CGG - Chr7:70360289-70360308 MsG0780039912.01.T01:intron 55.0%
GGTCAGTTTCCGGTTCAACC+TGG + Chr7:70358774-70358793 None:intergenic 55.0%
TCCTGGGTCCATTGCACTGT+TGG + Chr7:70363012-70363031 None:intergenic 55.0%
! TAGCGACTGCCAGGTTGAAC+CGG - Chr7:70358762-70358781 MsG0780039912.01.T01:intron 55.0%
!! CGTGCTGTTTGTTGCGAACG+AGG + Chr7:70360274-70360293 None:intergenic 55.0%
!! TTTCCCCCACGCCATTTTGC+TGG + Chr7:70359844-70359863 None:intergenic 55.0%
AGGTAGGGGGAATGGCATCG+AGG - Chr7:70359065-70359084 MsG0780039912.01.T01:intron 60.0%
CCAGCAGTCCCAGCAACATG+AGG + Chr7:70362140-70362159 None:intergenic 60.0%
CCCAACAGTGCAATGGACCC+AGG - Chr7:70363008-70363027 MsG0780039912.01.T01:five_prime_UTR 60.0%
CCTCATGTTGCTGGGACTGC+TGG - Chr7:70362137-70362156 MsG0780039912.01.T01:intron 60.0%
! GGGGAATGGCATCGAGGAGA+TGG - Chr7:70359071-70359090 MsG0780039912.01.T01:intron 60.0%
CAGCCTGATGTAACGGCGCC+CGG - Chr7:70362005-70362024 MsG0780039912.01.T01:intron 65.0%
CATCGAGGAGATGGTCGCGC+CGG - Chr7:70359080-70359099 MsG0780039912.01.T01:intron 65.0%
! ACACCGGGCGCCGTTACATC+AGG + Chr7:70362011-70362030 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 70357872 70363585 70357872 ID=MsG0780039912.01;Name=MsG0780039912.01
Chr7 mRNA 70357872 70363585 70357872 ID=MsG0780039912.01.T01;Parent=MsG0780039912.01;Name=MsG0780039912.01.T01;_AED=0.49;_eAED=0.49;_QI=1453|1|1|1|0.3|0.36|11|131|284
Chr7 exon 70357872 70358541 70357872 ID=MsG0780039912.01.T01:exon:13275;Parent=MsG0780039912.01.T01
Chr7 exon 70359233 70359449 70359233 ID=MsG0780039912.01.T01:exon:13274;Parent=MsG0780039912.01.T01
Chr7 exon 70359576 70359705 70359576 ID=MsG0780039912.01.T01:exon:13273;Parent=MsG0780039912.01.T01
Chr7 exon 70359864 70360032 70359864 ID=MsG0780039912.01.T01:exon:13272;Parent=MsG0780039912.01.T01
Chr7 exon 70360312 70360396 70360312 ID=MsG0780039912.01.T01:exon:13271;Parent=MsG0780039912.01.T01
Chr7 exon 70360518 70360612 70360518 ID=MsG0780039912.01.T01:exon:13270;Parent=MsG0780039912.01.T01
Chr7 exon 70360717 70361242 70360717 ID=MsG0780039912.01.T01:exon:13269;Parent=MsG0780039912.01.T01
Chr7 exon 70361544 70361665 70361544 ID=MsG0780039912.01.T01:exon:13268;Parent=MsG0780039912.01.T01
Chr7 exon 70362951 70363105 70362951 ID=MsG0780039912.01.T01:exon:13267;Parent=MsG0780039912.01.T01
Chr7 exon 70363219 70363316 70363219 ID=MsG0780039912.01.T01:exon:13266;Parent=MsG0780039912.01.T01
Chr7 exon 70363414 70363585 70363414 ID=MsG0780039912.01.T01:exon:13265;Parent=MsG0780039912.01.T01
Chr7 five_prime_UTR 70363414 70363585 70363414 ID=MsG0780039912.01.T01:five_prime_utr;Parent=MsG0780039912.01.T01
Chr7 five_prime_UTR 70363219 70363316 70363219 ID=MsG0780039912.01.T01:five_prime_utr;Parent=MsG0780039912.01.T01
Chr7 five_prime_UTR 70362951 70363105 70362951 ID=MsG0780039912.01.T01:five_prime_utr;Parent=MsG0780039912.01.T01
Chr7 five_prime_UTR 70361544 70361665 70361544 ID=MsG0780039912.01.T01:five_prime_utr;Parent=MsG0780039912.01.T01
Chr7 five_prime_UTR 70360717 70361242 70360717 ID=MsG0780039912.01.T01:five_prime_utr;Parent=MsG0780039912.01.T01
Chr7 five_prime_UTR 70360518 70360612 70360518 ID=MsG0780039912.01.T01:five_prime_utr;Parent=MsG0780039912.01.T01
Chr7 five_prime_UTR 70360312 70360396 70360312 ID=MsG0780039912.01.T01:five_prime_utr;Parent=MsG0780039912.01.T01
Chr7 five_prime_UTR 70359864 70360032 70359864 ID=MsG0780039912.01.T01:five_prime_utr;Parent=MsG0780039912.01.T01
Chr7 five_prime_UTR 70359675 70359705 70359675 ID=MsG0780039912.01.T01:five_prime_utr;Parent=MsG0780039912.01.T01
Chr7 CDS 70359576 70359674 70359576 ID=MsG0780039912.01.T01:cds;Parent=MsG0780039912.01.T01
Chr7 CDS 70359233 70359449 70359233 ID=MsG0780039912.01.T01:cds;Parent=MsG0780039912.01.T01
Chr7 CDS 70358003 70358541 70358003 ID=MsG0780039912.01.T01:cds;Parent=MsG0780039912.01.T01
Chr7 three_prime_UTR 70357872 70358002 70357872 ID=MsG0780039912.01.T01:three_prime_utr;Parent=MsG0780039912.01.T01
Chr7 mRNA 70360514 70363327 70360514 ID=MsG0780039912.01.T02;Parent=MsG0780039912.01;Name=MsG0780039912.01.T02;_AED=0.50;_eAED=0.50;_QI=0|0.5|0|1|0.5|0.33|3|0|109
Chr7 exon 70363219 70363327 70363219 ID=MsG0780039912.01.T02:exon:13278;Parent=MsG0780039912.01.T02
Chr7 exon 70362984 70363105 70362984 ID=MsG0780039912.01.T02:exon:13277;Parent=MsG0780039912.01.T02
Chr7 exon 70360514 70360612 70360514 ID=MsG0780039912.01.T02:exon:13276;Parent=MsG0780039912.01.T02
Chr7 CDS 70363219 70363327 70363219 ID=MsG0780039912.01.T02:cds;Parent=MsG0780039912.01.T02
Chr7 CDS 70362984 70363105 70362984 ID=MsG0780039912.01.T02:cds;Parent=MsG0780039912.01.T02
Chr7 CDS 70360514 70360612 70360514 ID=MsG0780039912.01.T02:cds;Parent=MsG0780039912.01.T02
Gene Sequence

>MsG0780039912.01.T02

ATGATTCACAGCAAAGAGAATGCAAAAGAAGCAATAATTTATTCATATAATAAACAGATCAATGGCTTTGCAGCTATACTTGAAGAAGAAGAAGCTGCACAAATTGCAAAAAATCCAAAGGTGGTATCTGTGTTCTTGAGCAAAGAGCATAAACTGCACACTACACGTTCTTGGGAATTTCTTGGACTAAGTACAAATGATATCAACTCAGCTTGGCAAAAGGAAGGTTTGGGAGCCAGTCTATTTGTAAACTTGCCACCTAACCAGTCTTTCACTCTAGTGGATTCTACGGATGTTAAATTTACCAATGTGACAAATCGAGATGCGTAA

>MsG0780039912.01.T01

ATGTCACAAGCAAAAACACTCATTGGAAGAAAGCCAGCTCCAGTTATGGCTTCATACTCATCTAGAGGACCAAGTGAAATTCAGCCATCAATACTAAAGCCTGATGTAACGGCGCCCGGTGTGAACATACTTGCAGCCTATTCATTGTTTGCAAGTGCATCTAACTTACCAACAGACAATCGTCGAGGTTTCCCATTCAATGTAATGCAAGGAACTTCTATGTCTTGCCCTCATGTTGCTGGGACTGCTGGATTAATCAAAACACTTCATCTGAATTGGAGTCCTGCGGCTATTAAATCAGCTATCATGACCACCGCAACCACAAGAGATAACACCAACAAGCCTATAAGTGATGCATTCGAAAACACAACTGCAAATCCATTTGCTTATGGTTCAGGACATATTCAACCCAACAGTGCAATGGACCCAGGACTTGTTTATGACCTAGGGATTAAGGATTACTTGAACTTCTTATGTGCTTCTGGATACAACCAACAACTCATTACAGCACTTAATTTCAACATGACATTTACTTGTTCAGGAACTCATAACATAGATGACTTGAATTATCCTTCAATCACATTACCAAATATTGGTTTAAATGTTGTTAATGTCACTCGTATAGTCACCAATGTTGGGCCACCAGTACATATTTTGCAAAAGTCCAATTGCCTGGATAAAATTGCTGTTGTACCAAGTTCCTTGAATTTCAAGAAAATAGGTGAAAAGAAGAAATTTCAAGTTATTGTGCAAGCAACAAGTGTGACTCCAAGGGGAAAATACCAATTTGGAGAACTGCAATGGACAAATGGAAAGCATATTGTAAGGAGTCCCATTACTGTTCAACGCAAATGA

Protein sequence

>MsG0780039912.01.T02

MIHSKENAKEAIIYSYNKQINGFAAILEEEEAAQIAKNPKVVSVFLSKEHKLHTTRSWEFLGLSTNDINSAWQKEGLGASLFVNLPPNQSFTLVDSTDVKFTNVTNRDA*

>MsG0780039912.01.T01

MSQAKTLIGRKPAPVMASYSSRGPSEIQPSILKPDVTAPGVNILAAYSLFASASNLPTDNRRGFPFNVMQGTSMSCPHVAGTAGLIKTLHLNWSPAAIKSAIMTTATTRDNTNKPISDAFENTTANPFAYGSGHIQPNSAMDPGLVYDLGIKDYLNFLCASGYNQQLITALNFNMTFTCSGTHNIDDLNYPSITLPNIGLNVVNVTRIVTNVGPPVHILQKSNCLDKIAVVPSSLNFKKIGEKKKFQVIVQATSVTPRGKYQFGELQWTNGKHIVRSPITVQRK*