AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010272.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010272.01.T01 MTR_2g080950 97.163 141 4 0 114 254 16 156 2.19e-95 287
MsG0280010272.01.T01 MTR_2g080950 97.163 141 4 0 114 254 67 207 8.41e-95 287
MsG0280010272.01.T01 MTR_2g080950 96.694 121 4 0 134 254 1 121 1.03e-79 246
MsG0280010272.01.T01 MTR_8g464390 70.213 141 31 1 114 254 16 145 5.99e-59 193
MsG0280010272.01.T01 MTR_8g464390 70.213 141 31 1 114 254 67 196 1.03e-58 194
MsG0280010272.01.T01 MTR_2g018850 62.136 103 28 2 1 92 455 557 4.96e-31 122
MsG0280010272.01.T01 MTR_8g464080 35.417 144 62 1 1 113 640 783 1.63e-21 94.4
MsG0280010272.01.T01 MTR_6g080710 63.793 58 19 1 114 169 67 124 1.95e-19 85.9
MsG0280010272.01.T01 MTR_1g088620 92.683 41 3 0 75 115 31 71 1.44e-18 83.6
MsG0280010272.01.T01 MTR_6g086675 37.037 108 37 1 20 96 38 145 1.75e-17 78.6
MsG0280010272.01.T01 MTR_6g086695 63.265 49 18 0 21 69 16 64 2.32e-16 72.0
MsG0280010272.01.T01 MTR_2g037490 58.537 41 17 0 1 41 38 78 4.60e-12 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010272.01.T01 AT5G54310 59.398 133 42 3 114 239 67 194 2.03e-41 149
MsG0280010272.01.T01 AT3G17660 65.517 58 20 0 114 171 67 124 9.12e-22 90.1
MsG0280010272.01.T01 AT3G17660 65.517 58 20 0 114 171 16 73 1.87e-21 89.7
MsG0280010272.01.T01 AT3G17660 65.517 58 20 0 114 171 67 124 3.32e-21 89.7
MsG0280010272.01.T01 AT3G17660 65.517 58 20 0 114 171 67 124 4.08e-21 90.1

Find 83 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTGGTAATCCTTCTTTA+TGG 0.237935 2:-67084767 None:intergenic
GTCACAAAACAACGTGTATA+AGG 0.244609 2:+67084519 MsG0280010272.01.T01:CDS
AAGTTTCAGCTTGTTGTTGC+GGG 0.320842 2:-67089707 None:intergenic
GTCACCTTGTATTCTCCCTT+TGG 0.351017 2:-67084783 None:intergenic
AGCTTGTTGTTGCGGGGTAC+TGG 0.380812 2:-67089700 None:intergenic
GTGTGCTGAGGTTGGGTAGC+AGG 0.392677 2:-67089664 None:intergenic
TTGTGAAAGCATCATATTAC+AGG 0.397827 2:+67084569 MsG0280010272.01.T01:CDS
GTCTGTAGCATAGTCTACTT+TGG 0.402825 2:-67089766 None:intergenic
CTTTATGGTCGATGGTTTCA+CGG 0.404826 2:-67084752 None:intergenic
TGAATGAATGCAACTTGCTC+TGG 0.405598 2:-67088968 None:intergenic
CTTTCTCAGTGTGCTGAGGT+TGG 0.413347 2:-67089672 None:intergenic
TTTCTCAGTGTGCTGAGGTT+GGG 0.420180 2:-67089671 None:intergenic
GTAGCAGGAACTGCATTTGA+TGG 0.432002 2:-67089475 None:intergenic
TTCGAATGTTGGGATGTTCA+TGG 0.440363 2:-67084365 None:intergenic
CAGGAACTGCATTTGATGGT+TGG 0.440758 2:-67089471 None:intergenic
AGCGGTAGTATTCGAATGTT+GGG 0.451424 2:-67084375 None:intergenic
ACGAGAAAGCAAATAGCTAC+TGG 0.453079 2:+67089118 MsG0280010272.01.T01:CDS
TCCTCGCAAGGTACCGGAGC+AGG 0.456370 2:+67089516 MsG0280010272.01.T01:CDS
TCCGGTACCTTGCGAGGAGC+TGG 0.466604 2:-67089511 None:intergenic
CTTTGAGCTGTGTCGGTAGC+CGG 0.468295 2:-67089735 None:intergenic
TAATCCTTCTTTATGGTCGA+TGG 0.470244 2:-67084760 None:intergenic
TCCAGCTCCTCGCAAGGTAC+CGG 0.471696 2:+67089510 MsG0280010272.01.T01:CDS
GAGCGGTAGTATTCGAATGT+TGG 0.481986 2:-67084376 None:intergenic
TCACAAAACAACGTGTATAA+GGG 0.483237 2:+67084520 MsG0280010272.01.T01:CDS
ATCATGTCACTCAGTTTGAC+CGG 0.487632 2:+67084709 MsG0280010272.01.T01:CDS
AAGACAAGAGATGGGTTTCA+AGG 0.489668 2:+67089317 MsG0280010272.01.T01:CDS
TCTGTAGCATAGTCTACTTT+GGG 0.494497 2:-67089765 None:intergenic
AGAATATCAATTACCTGCTC+CGG 0.496226 2:-67089529 None:intergenic
AAAGGTATGAAGACAAGAGA+TGG 0.503168 2:+67089308 MsG0280010272.01.T01:intron
CTTTCACAATAGCTGTGATC+GGG 0.516319 2:-67084555 None:intergenic
CAGAGGCCTGCAGAAAATAG+TGG 0.520069 2:+67089397 MsG0280010272.01.T01:CDS
GTTCTGCAACTCTTGACACT+TGG 0.520216 2:+67088942 MsG0280010272.01.T01:CDS
ACATGATGATGGTCGACGAT+GGG 0.522195 2:+67084471 MsG0280010272.01.T01:CDS
AAGAGATGGGTTTCAAGGGA+TGG 0.525253 2:+67089322 MsG0280010272.01.T01:CDS
TCACTCAGTTTGACCGGGAT+CGG 0.527033 2:+67084715 MsG0280010272.01.T01:CDS
AACGTGTATAAGGGTATTCG+AGG 0.534384 2:+67084529 MsG0280010272.01.T01:CDS
CCTCCACATTACGATAGAGT+TGG 0.536026 2:+67089153 MsG0280010272.01.T01:CDS
GAAGTTTCAGCTTGTTGTTG+CGG 0.538836 2:-67089708 None:intergenic
GATGGTTTCACGGACGGAGA+AGG 0.542055 2:-67084742 None:intergenic
CGAGAAAGCAAATAGCTACT+GGG 0.542617 2:+67089119 MsG0280010272.01.T01:CDS
ACAACATTCCTAAAGAAAAG+TGG 0.542645 2:+67084440 MsG0280010272.01.T01:CDS
GCAGGCCTCTGCTGATGTGA+AGG 0.549126 2:-67089385 None:intergenic
AGAGATGGGTTTCAAGGGAT+GGG 0.550790 2:+67089323 MsG0280010272.01.T01:CDS
GGGCCACATGACAAGTAACT+TGG 0.551059 2:+67084492 MsG0280010272.01.T01:CDS
GTAGCATAGTCTACTTTGGG+AGG 0.551215 2:-67089762 None:intergenic
ATTACCAAAGGGAGAATACA+AGG 0.552897 2:+67084779 MsG0280010272.01.T01:CDS
GGAACCCTACGTCTTGTAGC+AGG 0.553870 2:-67089490 None:intergenic
GAAACCATCGACCATAAAGA+AGG 0.554686 2:+67084756 MsG0280010272.01.T01:CDS
GCTTTCACAATAGCTGTGAT+CGG 0.558373 2:-67084556 None:intergenic
TCAACTTTCTCAGTGTGCTG+AGG 0.560105 2:-67089676 None:intergenic
AGCATAGTCTACTTTGGGAG+GGG 0.560866 2:-67089760 None:intergenic
CATAAAGAAGGATTACCAAA+GGG 0.563293 2:+67084768 MsG0280010272.01.T01:CDS
CACATGATGATGGTCGACGA+TGG 0.563477 2:+67084470 MsG0280010272.01.T01:CDS
ACCTGCTCCGGTACCTTGCG+AGG 0.564709 2:-67089517 None:intergenic
AGGGGTACTTTGAGCTGTGT+CGG 0.564760 2:-67089742 None:intergenic
CTGAGTGACATGATGACTGT+TGG 0.565675 2:-67084700 None:intergenic
CCTGCAGAAAATAGTGGACA+TGG 0.569275 2:+67089403 MsG0280010272.01.T01:CDS
ACAAGCTGAAACTTCAAAGC+CGG 0.570226 2:+67089716 MsG0280010272.01.T01:CDS
AAGGTATGAAGACAAGAGAT+GGG 0.572848 2:+67089309 MsG0280010272.01.T01:intron
CATGAAATATCTCAGGGATG+AGG 0.578371 2:+67084668 MsG0280010272.01.T01:intron
TAGCATAGTCTACTTTGGGA+GGG 0.578912 2:-67089761 None:intergenic
TGGACTCAATCACATGATGA+TGG 0.584355 2:+67084460 MsG0280010272.01.T01:CDS
CGGAGAAGGTATACCGATCC+CGG 0.587164 2:-67084728 None:intergenic
TCGAAAGGCTTTAGCATGGG+TGG 0.592034 2:+67084417 MsG0280010272.01.T01:CDS
AGACAAGAGATGGGTTTCAA+GGG 0.594902 2:+67089318 MsG0280010272.01.T01:CDS
TTATCTTCACGCAGTCCAGA+AGG 0.598442 2:-67089358 None:intergenic
CAGATCGAAAGGCTTTAGCA+TGG 0.598610 2:+67084413 MsG0280010272.01.T01:CDS
ATGGTCGATGGTTTCACGGA+CGG 0.607151 2:-67084748 None:intergenic
AGATCGAAAGGCTTTAGCAT+GGG 0.608051 2:+67084414 MsG0280010272.01.T01:CDS
AATCGCTGTTGCAGATCGAA+AGG 0.609726 2:+67084402 MsG0280010272.01.T01:CDS
TAGGGTTCCAGCTCCTCGCA+AGG 0.614792 2:+67089504 MsG0280010272.01.T01:CDS
CCATAAAGAAGGATTACCAA+AGG 0.621002 2:+67084767 MsG0280010272.01.T01:CDS
AGTTCCTGCTACAAGACGTA+GGG 0.629500 2:+67089486 MsG0280010272.01.T01:CDS
TCATGTCACTCAGTTTGACC+GGG 0.630205 2:+67084710 MsG0280010272.01.T01:CDS
AGTCCAACTCTATCGTAATG+TGG 0.641617 2:-67089156 None:intergenic
CTACCAAGTTACTTGTCATG+TGG 0.646732 2:-67084495 None:intergenic
CAGTTCCTGCTACAAGACGT+AGG 0.647490 2:+67089485 MsG0280010272.01.T01:CDS
AGTTTCAGCTTGTTGTTGCG+GGG 0.650076 2:-67089706 None:intergenic
AATCTCCTTCACATCAGCAG+AGG 0.669955 2:+67089380 MsG0280010272.01.T01:CDS
AAAAGTATTCTCAGCAACAG+TGG 0.676236 2:-67089431 None:intergenic
CATGATGATGGTCGACGATG+GGG 0.681327 2:+67084472 MsG0280010272.01.T01:CDS
CCAACTCTATCGTAATGTGG+AGG 0.685175 2:-67089153 None:intergenic
CTGCAACAGCGATTTCAGAG+CGG 0.720724 2:-67084393 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATAATAAATAATCC+TGG - Chr2:67087910-67087929 None:intergenic 10.0%
!! AACTAGATAAAAAAAAAATG+AGG - Chr2:67086151-67086170 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - Chr2:67085363-67085382 None:intergenic 15.0%
!! CAATTAAAAAAATCATGTAT+CGG + Chr2:67088769-67088788 MsG0280010272.01.T01:intron 15.0%
!! TAACAACTTAATTTAAAGAA+AGG - Chr2:67085249-67085268 None:intergenic 15.0%
!! TATGTAAAATTAAATCCTAT+GGG + Chr2:67086933-67086952 MsG0280010272.01.T01:intron 15.0%
!! TATTTAGCATCAAAATTTAA+GGG - Chr2:67088140-67088159 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - Chr2:67085364-67085383 None:intergenic 15.0%
!! TCTTAAAAGTTATTCATATT+TGG + Chr2:67087459-67087478 MsG0280010272.01.T01:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - Chr2:67085428-67085447 None:intergenic 15.0%
!!! ATTAATCAATTAGGATATTT+TGG + Chr2:67086689-67086708 MsG0280010272.01.T01:intron 15.0%
!!! ATTTATAAAGACTATTTTGA+AGG - Chr2:67086065-67086084 None:intergenic 15.0%
!!! CTATTTTTTAATATTTCGTT+TGG + Chr2:67088490-67088509 MsG0280010272.01.T01:intron 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - Chr2:67085429-67085448 None:intergenic 15.0%
!!! TATTGAACAATTTTGTTTTT+AGG + Chr2:67087641-67087660 MsG0280010272.01.T01:intron 15.0%
!!! TATTTTAGAATTTCTTGTTT+TGG + Chr2:67089076-67089095 MsG0280010272.01.T01:intron 15.0%
!!! TTTATTTTGTTTTTGTAACA+AGG + Chr2:67089556-67089575 MsG0280010272.01.T01:intron 15.0%
!! AAAGTGGAATATATTGTATT+GGG - Chr2:67085404-67085423 None:intergenic 20.0%
!! AATAATGTGTCTAGTTAAAT+GGG + Chr2:67088335-67088354 MsG0280010272.01.T01:intron 20.0%
!! AATGTAATTACTTTACTTTC+AGG + Chr2:67088916-67088935 MsG0280010272.01.T01:intron 20.0%
!! ATAGTAAAAATTTCACAAGT+GGG + Chr2:67088175-67088194 MsG0280010272.01.T01:intron 20.0%
!! ATTACATTAGTATACAATGA+AGG - Chr2:67088904-67088923 None:intergenic 20.0%
!! ATTGTATATATTGTGATTTG+TGG + Chr2:67088200-67088219 MsG0280010272.01.T01:intron 20.0%
!! CAATTATTGCATATACTTAA+AGG + Chr2:67089290-67089309 MsG0280010272.01.T01:intron 20.0%
!! CTATTTAGCATCAAAATTTA+AGG - Chr2:67088141-67088160 None:intergenic 20.0%
!! GTATGTAAAATTAAATCCTA+TGG + Chr2:67086932-67086951 MsG0280010272.01.T01:intron 20.0%
!! GTTTGAGTAATTGTAAATTT+GGG + Chr2:67087281-67087300 MsG0280010272.01.T01:intron 20.0%
!! TAATATTAATGCAATCTTTG+CGG - Chr2:67085141-67085160 None:intergenic 20.0%
!! TATAGTAAAAATTTCACAAG+TGG + Chr2:67088174-67088193 MsG0280010272.01.T01:intron 20.0%
!! TATATGCAATAATTGAAATC+AGG - Chr2:67089285-67089304 None:intergenic 20.0%
!! TGTTTGAGTAATTGTAAATT+TGG + Chr2:67087280-67087299 MsG0280010272.01.T01:intron 20.0%
!! TTAGTTTATTCTTTCTTAGT+TGG + Chr2:67086631-67086650 MsG0280010272.01.T01:intron 20.0%
!! TTCATTAAACAACATATTTG+TGG + Chr2:67085902-67085921 MsG0280010272.01.T01:intron 20.0%
!!! AAATTCTCGTCTTATTATAT+AGG - Chr2:67086274-67086293 None:intergenic 20.0%
!!! AAATTTTTTCATAACTTGCA+TGG - Chr2:67085537-67085556 None:intergenic 20.0%
!!! AACATTATATTGTAGTTTGT+AGG + Chr2:67085993-67086012 MsG0280010272.01.T01:intron 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - Chr2:67085427-67085446 None:intergenic 20.0%
!!! ATTGTAAATTTGGGATATTA+AGG + Chr2:67087290-67087309 MsG0280010272.01.T01:intron 20.0%
!!! CCAAATTTAAAGTACAAAAA+GGG - Chr2:67089591-67089610 None:intergenic 20.0%
!!! GAAATATTCATTTTGTAAAC+AGG + Chr2:67089636-67089655 MsG0280010272.01.T01:intron 20.0%
!!! GTGTCTAGTTTTTTTTTTTA+GGG + Chr2:67088311-67088330 MsG0280010272.01.T01:intron 20.0%
!!! TATCATTTTCCTTATTTAAC+AGG + Chr2:67088460-67088479 MsG0280010272.01.T01:intron 20.0%
!!! TCCAAATTTAAAGTACAAAA+AGG - Chr2:67089592-67089611 None:intergenic 20.0%
!!! TGAATGATTATTTAGCTTTT+GGG + Chr2:67087083-67087102 MsG0280010272.01.T01:intron 20.0%
!!! TGTCTAGTTTTTTTTTTTAG+GGG + Chr2:67088312-67088331 MsG0280010272.01.T01:intron 20.0%
!!! TGTGTCTAGTTTTTTTTTTT+AGG + Chr2:67088310-67088329 MsG0280010272.01.T01:intron 20.0%
!!! TGTTTTATTGATATTTTGAG+TGG + Chr2:67087413-67087432 MsG0280010272.01.T01:intron 20.0%
! AAAACATCATGAAATATCTC+AGG + Chr2:67084661-67084680 MsG0280010272.01.T01:intron 25.0%
! AAACATCATGAAATATCTCA+GGG + Chr2:67084662-67084681 MsG0280010272.01.T01:intron 25.0%
! AATATTAATGCAATCTTTGC+GGG - Chr2:67085140-67085159 None:intergenic 25.0%
! ATTAAACAACATATTTGTGG+TGG + Chr2:67085905-67085924 MsG0280010272.01.T01:intron 25.0%
! ATTATCGAAGAAGAATGAAA+AGG - Chr2:67086494-67086513 None:intergenic 25.0%
! ATTGTAGTTCTTATGTTGAA+AGG - Chr2:67087604-67087623 None:intergenic 25.0%
! CAAGCAAATAGATACAAAAT+TGG + Chr2:67087849-67087868 MsG0280010272.01.T01:intron 25.0%
! CTCATAACATCTTGAAAATA+AGG - Chr2:67087127-67087146 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - Chr2:67085405-67085424 None:intergenic 25.0%
! GAATAATGTGTCTAGTTAAA+TGG + Chr2:67088334-67088353 MsG0280010272.01.T01:intron 25.0%
! TACTCAAACAAACAACTAAA+TGG - Chr2:67087270-67087289 None:intergenic 25.0%
! TCAAATATGTAGATACTAGA+AGG + Chr2:67087721-67087740 MsG0280010272.01.T01:intron 25.0%
! TCTTATGTTGAAAGGATTTA+AGG - Chr2:67087596-67087615 None:intergenic 25.0%
! TGATAGAAACAAGAAATAGA+TGG + Chr2:67088425-67088444 MsG0280010272.01.T01:intron 25.0%
! TTATCGAAGAAGAATGAAAA+GGG - Chr2:67086493-67086512 None:intergenic 25.0%
! TTTATTCTTTCTTAGTTGGT+AGG + Chr2:67086635-67086654 MsG0280010272.01.T01:intron 25.0%
!! AAAAATCGAAATGATGATGA+TGG - Chr2:67086559-67086578 None:intergenic 25.0%
!! CAATAACACATAATGTTTTG+TGG + Chr2:67088237-67088256 MsG0280010272.01.T01:intron 25.0%
!! CCCTTTTTGTACTTTAAATT+TGG + Chr2:67089588-67089607 MsG0280010272.01.T01:intron 25.0%
!! TCACTATAAAACCAACATTT+TGG - Chr2:67088841-67088860 None:intergenic 25.0%
!! TTAAGATATTTGTTACTGCA+AGG - Chr2:67087535-67087554 None:intergenic 25.0%
!! TTATTTGTCACCATTGTTTT+TGG - Chr2:67086203-67086222 None:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG - Chr2:67085317-67085336 None:intergenic 25.0%
!! TTTTTAAATACCTCTCAACT+TGG - Chr2:67085585-67085604 None:intergenic 25.0%
!!! AAAAACGGTTTAGAATTTTC+TGG - Chr2:67087240-67087259 None:intergenic 25.0%
!!! AGTAGGGTATTTTTGTATTT+TGG + Chr2:67085735-67085754 MsG0280010272.01.T01:intron 25.0%
!!! ATTGATATTTTGAGTGGAAA+AGG + Chr2:67087419-67087438 MsG0280010272.01.T01:intron 25.0%
!!! CTATTTCTTGTTTCTATCAA+GGG - Chr2:67088424-67088443 None:intergenic 25.0%
!!! GGACACTTTTTTTAGAAAAT+GGG - Chr2:67085295-67085314 None:intergenic 25.0%
!!! GTAGGGTATTTTTGTATTTT+GGG + Chr2:67085736-67085755 MsG0280010272.01.T01:intron 25.0%
!!! GTGAATGATTATTTAGCTTT+TGG + Chr2:67087082-67087101 MsG0280010272.01.T01:intron 25.0%
!!! TCTATTTCTTGTTTCTATCA+AGG - Chr2:67088425-67088444 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG - Chr2:67085316-67085335 None:intergenic 25.0%
!!! TGCATTTTTTCGAAAAAGTA+GGG + Chr2:67085719-67085738 MsG0280010272.01.T01:intron 25.0%
!!! TGTATTTTGGGAATAAAGTA+GGG + Chr2:67085748-67085767 MsG0280010272.01.T01:intron 25.0%
!!! TTGCATTTTTTCGAAAAAGT+AGG + Chr2:67085718-67085737 MsG0280010272.01.T01:intron 25.0%
!!! TTGTATTTTGGGAATAAAGT+AGG + Chr2:67085747-67085766 MsG0280010272.01.T01:intron 25.0%
AAACCTCCAAAAAGGAAATA+TGG - Chr2:67087040-67087059 None:intergenic 30.0%
AAAGGAAATATGGGAAACTA+AGG - Chr2:67087030-67087049 None:intergenic 30.0%
AACCTCCAAAAAGGAAATAT+GGG - Chr2:67087039-67087058 None:intergenic 30.0%
AACTAGTATATCTTTCCCAT+AGG - Chr2:67086951-67086970 None:intergenic 30.0%
AAGCTAAGTATGTATTTGTC+TGG + Chr2:67087785-67087804 MsG0280010272.01.T01:intron 30.0%
AAGGAAATATGGGAAACTAA+GGG - Chr2:67087029-67087048 None:intergenic 30.0%
ACAAAAGAAAAAACATTGCG+AGG + Chr2:67087368-67087387 MsG0280010272.01.T01:intron 30.0%
ACAACATTCCTAAAGAAAAG+TGG + Chr2:67084440-67084459 MsG0280010272.01.T01:CDS 30.0%
AGGAGAAGGATTTATTTCAA+TGG - Chr2:67085854-67085873 None:intergenic 30.0%
CAAAAGTCATTGGAACTTAT+AGG - Chr2:67088876-67088895 None:intergenic 30.0%
CAGTGCAAAAATTCTTCATA+TGG + Chr2:67086774-67086793 MsG0280010272.01.T01:intron 30.0%
CATAAAGAAGGATTACCAAA+GGG + Chr2:67084768-67084787 MsG0280010272.01.T01:CDS 30.0%
CTTTGTCGGATTAATCAATT+AGG + Chr2:67086680-67086699 MsG0280010272.01.T01:intron 30.0%
GGAGAAGGATTTATTTCAAT+GGG - Chr2:67085853-67085872 None:intergenic 30.0%
GTTGTTTAATGAAGTAGATG+CGG - Chr2:67085895-67085914 None:intergenic 30.0%
TAAAAATGTGCATCATGAAG+TGG + Chr2:67086874-67086893 MsG0280010272.01.T01:intron 30.0%
TATCGAAGAAGAATGAAAAG+GGG - Chr2:67086492-67086511 None:intergenic 30.0%
TATGCAATGCATTCATGATA+GGG + Chr2:67086851-67086870 MsG0280010272.01.T01:intron 30.0%
TCACAAAACAACGTGTATAA+GGG + Chr2:67084520-67084539 MsG0280010272.01.T01:CDS 30.0%
TCCTGGAAATGAAAAAACAA+AGG - Chr2:67087893-67087912 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - Chr2:67085420-67085439 None:intergenic 30.0%
TTCACACTTTATAGTCTATC+CGG - Chr2:67085944-67085963 None:intergenic 30.0%
TTCTTAAACTACCAGAGAAT+CGG + Chr2:67087746-67087765 MsG0280010272.01.T01:intron 30.0%
! AAAACCAACATTTTGGACTT+AGG - Chr2:67088834-67088853 None:intergenic 30.0%
! AGCTGATTTCCTGTTAAATA+AGG - Chr2:67088472-67088491 None:intergenic 30.0%
! AGTTTCCCATATTTCCTTTT+TGG + Chr2:67087031-67087050 MsG0280010272.01.T01:intron 30.0%
! CAAAATTGGTTCTTGAAATG+TGG + Chr2:67087863-67087882 MsG0280010272.01.T01:intron 30.0%
! GAAGATGGATTCAGTTTAAT+TGG + Chr2:67087494-67087513 MsG0280010272.01.T01:intron 30.0%
! GTAAATTTGGGATATTAAGG+AGG + Chr2:67087293-67087312 MsG0280010272.01.T01:intron 30.0%
! TTCTCGTCTTATTATATAGG+AGG - Chr2:67086271-67086290 None:intergenic 30.0%
!! AAGTCATGGATTAGTCATTT+GGG + Chr2:67087185-67087204 MsG0280010272.01.T01:intron 30.0%
!! AATACTTTTCTAGTGATGCA+TGG + Chr2:67086716-67086735 MsG0280010272.01.T01:intron 30.0%
!! CTGAGAATACTTTTGAAGAA+AGG + Chr2:67089440-67089459 MsG0280010272.01.T01:CDS 30.0%
!! TAAGTCATGGATTAGTCATT+TGG + Chr2:67087184-67087203 MsG0280010272.01.T01:intron 30.0%
!! TTCATGATGTTTTCTGAGAA+TGG - Chr2:67084654-67084673 None:intergenic 30.0%
!! TTGTGAAAGCATCATATTAC+AGG + Chr2:67084569-67084588 MsG0280010272.01.T01:CDS 30.0%
!!! GGGACACTTTTTTTAGAAAA+TGG - Chr2:67085296-67085315 None:intergenic 30.0%
!!! TTTTGGTTCTATTCAGCAAT+GGG + Chr2:67089093-67089112 MsG0280010272.01.T01:intron 30.0%
AACTGAATCCATCTTCATGT+AGG - Chr2:67087490-67087509 None:intergenic 35.0%
AAGAAGATCCAAGGTCAAAA+TGG - Chr2:67086336-67086355 None:intergenic 35.0%
AAGATTTACACTTGCCATCT+CGG - Chr2:67087979-67087998 None:intergenic 35.0%
AAGGTATGAAGACAAGAGAT+GGG + Chr2:67089309-67089328 MsG0280010272.01.T01:intron 35.0%
AAGGTGACCTGCAAAATAAA+TGG + Chr2:67084798-67084817 MsG0280010272.01.T01:intron 35.0%
ACTGAATCCATCTTCATGTA+GGG - Chr2:67087489-67087508 None:intergenic 35.0%
ACTTATAAACCTCACGAGTT+AGG - Chr2:67087169-67087188 None:intergenic 35.0%
ACTTTGCCGACAAAAAGTTA+TGG - Chr2:67088724-67088743 None:intergenic 35.0%
AGAAAACGAAAGCTTGAGAA+AGG - Chr2:67086365-67086384 None:intergenic 35.0%
AGAAGAAACCTTCTTGTGTT+TGG - Chr2:67086463-67086482 None:intergenic 35.0%
AGAATATCAATTACCTGCTC+CGG - Chr2:67089532-67089551 None:intergenic 35.0%
AGGATTTATTTCAATGGGAG+AGG - Chr2:67085848-67085867 None:intergenic 35.0%
AGTTTGGGGACATATATCAA+AGG + Chr2:67088038-67088057 MsG0280010272.01.T01:intron 35.0%
ATGTATTTGTCTGGATCTGA+AGG + Chr2:67087794-67087813 MsG0280010272.01.T01:intron 35.0%
ATTACCAAAGGGAGAATACA+AGG + Chr2:67084779-67084798 MsG0280010272.01.T01:CDS 35.0%
ATTTCCATAAAGAGACGAGA+GGG + Chr2:67086294-67086313 MsG0280010272.01.T01:intron 35.0%
CAAAATAAATGGTGTGACTG+TGG + Chr2:67084809-67084828 MsG0280010272.01.T01:intron 35.0%
CAAAGTAGGTCAATTATACC+GGG + Chr2:67085464-67085483 MsG0280010272.01.T01:intron 35.0%
CATAGTGTGAATATCAGTAG+TGG + Chr2:67088101-67088120 MsG0280010272.01.T01:intron 35.0%
CCAAAGTAGGTCAATTATAC+CGG + Chr2:67085463-67085482 MsG0280010272.01.T01:intron 35.0%
CCATAAAGAAGGATTACCAA+AGG + Chr2:67084767-67084786 MsG0280010272.01.T01:CDS 35.0%
CTATGCAATGCATTCATGAT+AGG + Chr2:67086850-67086869 MsG0280010272.01.T01:intron 35.0%
CTTTAACTCTGATGAGTACT+AGG + Chr2:67088689-67088708 MsG0280010272.01.T01:intron 35.0%
GAAGGAAAGACAAAAGTCAT+TGG - Chr2:67088886-67088905 None:intergenic 35.0%
GGATTTATTTCAATGGGAGA+GGG - Chr2:67085847-67085866 None:intergenic 35.0%
GTCACAAAACAACGTGTATA+AGG + Chr2:67084519-67084538 MsG0280010272.01.T01:CDS 35.0%
GTCGAAGTGGATGTTATATA+CGG - Chr2:67084948-67084967 None:intergenic 35.0%
GTGCTTGTATGTGATCTATA+TGG - Chr2:67085793-67085812 None:intergenic 35.0%
TAATCCTTCTTTATGGTCGA+TGG - Chr2:67084763-67084782 None:intergenic 35.0%
TATGCTGATGTTTATGTGCT+CGG + Chr2:67088266-67088285 MsG0280010272.01.T01:intron 35.0%
TATTTCCATAAAGAGACGAG+AGG + Chr2:67086293-67086312 MsG0280010272.01.T01:intron 35.0%
TATTTGTGGTGGTTACCTAT+TGG + Chr2:67085916-67085935 MsG0280010272.01.T01:intron 35.0%
TCAGGAATACATCGAAGTTT+GGG + Chr2:67088023-67088042 MsG0280010272.01.T01:intron 35.0%
TCTATGGTGTTTCACTTTGT+CGG + Chr2:67086666-67086685 MsG0280010272.01.T01:intron 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + Chr2:67085450-67085469 MsG0280010272.01.T01:intron 35.0%
TCTTAAACTACCAGAGAATC+GGG + Chr2:67087747-67087766 MsG0280010272.01.T01:intron 35.0%
TGTATTTGTCTGGATCTGAA+GGG + Chr2:67087795-67087814 MsG0280010272.01.T01:intron 35.0%
TTCAGGAATACATCGAAGTT+TGG + Chr2:67088022-67088041 MsG0280010272.01.T01:intron 35.0%
TTTAATGAAGTAGATGCGGA+AGG - Chr2:67085891-67085910 None:intergenic 35.0%
TTTATATGCATGCAGTGTTC+AGG + Chr2:67088005-67088024 MsG0280010272.01.T01:intron 35.0%
TTTATTGCTGACATGAGATC+CGG - Chr2:67087828-67087847 None:intergenic 35.0%
! AAAGGTATGAAGACAAGAGA+TGG + Chr2:67089308-67089327 MsG0280010272.01.T01:intron 35.0%
! ACATATTGGCCTGATTATGA+AGG + Chr2:67084983-67085002 MsG0280010272.01.T01:intron 35.0%
! ATAGTAGAATGAAAGCGTGT+GGG + Chr2:67086177-67086196 MsG0280010272.01.T01:intron 35.0%
! ATGTCCTCTTTTAGCAAACA+AGG - Chr2:67084601-67084620 None:intergenic 35.0%
! CACTGTTGTATTTTCCAACT+AGG - Chr2:67088535-67088554 None:intergenic 35.0%
! CCTTTGGTAATCCTTCTTTA+TGG - Chr2:67084770-67084789 None:intergenic 35.0%
! GACATTCGCATGTAAACTTT+TGG + Chr2:67088607-67088626 MsG0280010272.01.T01:intron 35.0%
! GTTGTATTTTCCAACTAGGT+GGG - Chr2:67088531-67088550 None:intergenic 35.0%
! TATAGTAGAATGAAAGCGTG+TGG + Chr2:67086176-67086195 MsG0280010272.01.T01:intron 35.0%
! TGGAGTTGAGAGGTATAATA+AGG - Chr2:67085565-67085584 None:intergenic 35.0%
! TGTTGTATTTTCCAACTAGG+TGG - Chr2:67088532-67088551 None:intergenic 35.0%
! TTCAATGTAAGTGAGTTGAG+TGG + Chr2:67088987-67089006 MsG0280010272.01.T01:intron 35.0%
! TTCCCATATTTCCTTTTTGG+AGG + Chr2:67087034-67087053 MsG0280010272.01.T01:intron 35.0%
! TTGTATTTTCCAACTAGGTG+GGG - Chr2:67088530-67088549 None:intergenic 35.0%
! TTTAGGATTTGCCACATCTT+CGG + Chr2:67087658-67087677 MsG0280010272.01.T01:intron 35.0%
!! AAAAGTATTCTCAGCAACAG+TGG - Chr2:67089434-67089453 None:intergenic 35.0%
!! AATTCTAAACCGTTTTTCCC+AGG + Chr2:67087243-67087262 MsG0280010272.01.T01:intron 35.0%
!! AGGAAAAGGTGTTTGTGATT+TGG - Chr2:67085817-67085836 None:intergenic 35.0%
!! ATTCTAAACCGTTTTTCCCA+GGG + Chr2:67087244-67087263 MsG0280010272.01.T01:intron 35.0%
!! GATTGAGTCCACTTTTCTTT+AGG - Chr2:67084451-67084470 None:intergenic 35.0%
!! TCAAAAGACCATTTTGACCT+TGG + Chr2:67086325-67086344 MsG0280010272.01.T01:intron 35.0%
!! TGAAAGCATCATATTACAGG+TGG + Chr2:67084572-67084591 MsG0280010272.01.T01:intron 35.0%
!! TTGGTAGGTTGATTGATCTA+TGG + Chr2:67086650-67086669 MsG0280010272.01.T01:intron 35.0%
!!! AGTCACACCATTTATTTTGC+AGG - Chr2:67084808-67084827 None:intergenic 35.0%
!!! GCCTTTGTTTTTTCATTTCC+AGG + Chr2:67087889-67087908 MsG0280010272.01.T01:intron 35.0%
!!! GTTTTGGTTCTATTCAGCAA+TGG + Chr2:67089092-67089111 MsG0280010272.01.T01:intron 35.0%
AACAAACAACTAAATGGCCC+TGG - Chr2:67087264-67087283 None:intergenic 40.0%
AAGCATCATATTACAGGTGG+CGG + Chr2:67084575-67084594 MsG0280010272.01.T01:intron 40.0%
ACAAACAACTAAATGGCCCT+GGG - Chr2:67087263-67087282 None:intergenic 40.0%
ACAAGCTGAAACTTCAAAGC+CGG + Chr2:67089716-67089735 MsG0280010272.01.T01:CDS 40.0%
ACCTTCAGTCCTTCATAATC+AGG - Chr2:67084995-67085014 None:intergenic 40.0%
ACGAGAAAGCAAATAGCTAC+TGG + Chr2:67089118-67089137 MsG0280010272.01.T01:CDS 40.0%
ACGCTGAAAAACCTCCAAAA+AGG - Chr2:67087048-67087067 None:intergenic 40.0%
ACGTGAGAATTGCTGAAGTA+TGG + Chr2:67088806-67088825 MsG0280010272.01.T01:intron 40.0%
AGCGGTAGTATTCGAATGTT+GGG - Chr2:67084378-67084397 None:intergenic 40.0%
AGGAAGAAGAAGAAGATCCA+AGG - Chr2:67086345-67086364 None:intergenic 40.0%
AGTCCAACTCTATCGTAATG+TGG - Chr2:67089159-67089178 None:intergenic 40.0%
ATATAACATCCACTTCGACG+TGG + Chr2:67084949-67084968 MsG0280010272.01.T01:intron 40.0%
ATCAATCCCTTCAGCCATAA+CGG - Chr2:67087326-67087345 None:intergenic 40.0%
ATCATGTCACTCAGTTTGAC+CGG + Chr2:67084709-67084728 MsG0280010272.01.T01:CDS 40.0%
ATGTTATGAGTCCACCTTCA+AGG + Chr2:67087137-67087156 MsG0280010272.01.T01:intron 40.0%
CAGGAATACATCGAAGTTTG+GGG + Chr2:67088024-67088043 MsG0280010272.01.T01:intron 40.0%
CATAATCAGGCCAATATGTC+TGG - Chr2:67084982-67085001 None:intergenic 40.0%
CATGAAATATCTCAGGGATG+AGG + Chr2:67084668-67084687 MsG0280010272.01.T01:intron 40.0%
CCGGTATAATTGACCTACTT+TGG - Chr2:67085466-67085485 None:intergenic 40.0%
CGAGAAAGCAAATAGCTACT+GGG + Chr2:67089119-67089138 MsG0280010272.01.T01:CDS 40.0%
CTACCAAGTTACTTGTCATG+TGG - Chr2:67084498-67084517 None:intergenic 40.0%
CTCGTGAGGTTTATAAGTCA+TGG + Chr2:67087171-67087190 MsG0280010272.01.T01:intron 40.0%
CTTTATGGTCGATGGTTTCA+CGG - Chr2:67084755-67084774 None:intergenic 40.0%
CTTTCACAATAGCTGTGATC+GGG - Chr2:67084558-67084577 None:intergenic 40.0%
GAAACCATCGACCATAAAGA+AGG + Chr2:67084756-67084775 MsG0280010272.01.T01:CDS 40.0%
GAGATGGCAAGTGTAAATCT+TGG + Chr2:67087978-67087997 MsG0280010272.01.T01:intron 40.0%
GCATCATGAAGTGGTTTGAT+TGG + Chr2:67086883-67086902 MsG0280010272.01.T01:intron 40.0%
GCTTTCACAATAGCTGTGAT+CGG - Chr2:67084559-67084578 None:intergenic 40.0%
GTAAACTGCATAAACACTGC+CGG - Chr2:67088670-67088689 None:intergenic 40.0%
GTATTTGTCTGGATCTGAAG+GGG + Chr2:67087796-67087815 MsG0280010272.01.T01:intron 40.0%
GTGAGAAAAGCTAGAACATG+CGG - Chr2:67084876-67084895 None:intergenic 40.0%
TAATAATACTACCTCCGTCC+CGG - Chr2:67085485-67085504 None:intergenic 40.0%
TGATTATGAAGGACTGAAGG+TGG + Chr2:67084994-67085013 MsG0280010272.01.T01:intron 40.0%
TGATTGCTTCAGGAACGAAT+CGG - Chr2:67086401-67086420 None:intergenic 40.0%
TGGACTCAATCACATGATGA+TGG + Chr2:67084460-67084479 MsG0280010272.01.T01:CDS 40.0%
TGTTATGAGTCCACCTTCAA+GGG + Chr2:67087138-67087157 MsG0280010272.01.T01:intron 40.0%
TTCAGCGTTATTTGGATGCT+CGG + Chr2:67087060-67087079 MsG0280010272.01.T01:intron 40.0%
! AAGACAAGAGATGGGTTTCA+AGG + Chr2:67089317-67089336 MsG0280010272.01.T01:CDS 40.0%
! AGACAAGAGATGGGTTTCAA+GGG + Chr2:67089318-67089337 MsG0280010272.01.T01:CDS 40.0%
! AGATCGAAAGGCTTTAGCAT+GGG + Chr2:67084414-67084433 MsG0280010272.01.T01:CDS 40.0%
! ATATCAGTAGTGGAGACTCT+TGG + Chr2:67088111-67088130 MsG0280010272.01.T01:intron 40.0%
! GCTGCACCATAACTTTTTGT+CGG + Chr2:67088715-67088734 MsG0280010272.01.T01:intron 40.0%
! GTTTGCTAAAAGAGGACATG+AGG + Chr2:67084602-67084621 MsG0280010272.01.T01:intron 40.0%
! TATCAGTAGTGGAGACTCTT+GGG + Chr2:67088112-67088131 MsG0280010272.01.T01:intron 40.0%
! TGAATGAATGCAACTTGCTC+TGG - Chr2:67088971-67088990 None:intergenic 40.0%
! TGGTTTTCCCTACATGAAGA+TGG + Chr2:67087479-67087498 MsG0280010272.01.T01:intron 40.0%
! TTGCGTGGTACTGAAAAGTA+GGG + Chr2:67085690-67085709 MsG0280010272.01.T01:intron 40.0%
!! AACGTGTATAAGGGTATTCG+AGG + Chr2:67084529-67084548 MsG0280010272.01.T01:CDS 40.0%
!! AAGTTTCAGCTTGTTGTTGC+GGG - Chr2:67089710-67089729 None:intergenic 40.0%
!! CATGGATTAGTCATTTGGGA+TGG + Chr2:67087189-67087208 MsG0280010272.01.T01:intron 40.0%
!! GAAGTTTCAGCTTGTTGTTG+CGG - Chr2:67089711-67089730 None:intergenic 40.0%
!! GGAGGTTTTTCAGCGTTATT+TGG + Chr2:67087052-67087071 MsG0280010272.01.T01:intron 40.0%
!! GTCGGCAAAGTTTTTCAATG+TGG + Chr2:67088733-67088752 MsG0280010272.01.T01:intron 40.0%
!! GTTAAGCTCTTTGGTAACGT+TGG - Chr2:67086439-67086458 None:intergenic 40.0%
!! TGGTCGTGTTCTTGTTATTG+TGG + Chr2:67089007-67089026 MsG0280010272.01.T01:intron 40.0%
AAAGACGTAAGCCGAAGAGA+AGG - Chr2:67087688-67087707 None:intergenic 45.0%
AACTCTGATGAGTACTAGGC+TGG + Chr2:67088693-67088712 MsG0280010272.01.T01:intron 45.0%
AAGACGTAAGCCGAAGAGAA+GGG - Chr2:67087687-67087706 None:intergenic 45.0%
AATCAGGCCAATATGTCTGG+TGG - Chr2:67084979-67084998 None:intergenic 45.0%
AATCAGGTGCAGAAAGCAAG+AGG - Chr2:67089269-67089288 None:intergenic 45.0%
AATCGCTGTTGCAGATCGAA+AGG + Chr2:67084402-67084421 MsG0280010272.01.T01:CDS 45.0%
AATCTCCTTCACATCAGCAG+AGG + Chr2:67089380-67089399 MsG0280010272.01.T01:CDS 45.0%
AATGAAGTAGATGCGGAAGG+TGG - Chr2:67085888-67085907 None:intergenic 45.0%
AATGGGTCAGTTATCCGAGA+CGG - Chr2:67085278-67085297 None:intergenic 45.0%
ACTTGTTCCGTTATGGCTGA+AGG + Chr2:67087316-67087335 MsG0280010272.01.T01:intron 45.0%
AGCAATCACCATGAACGGAA+AGG + Chr2:67086413-67086432 MsG0280010272.01.T01:intron 45.0%
AGTTCCTGCTACAAGACGTA+GGG + Chr2:67089486-67089505 MsG0280010272.01.T01:CDS 45.0%
ATGAAGTAGATGCGGAAGGT+GGG - Chr2:67085887-67085906 None:intergenic 45.0%
ATGACAGACATTCCAGACCA+AGG - Chr2:67088084-67088103 None:intergenic 45.0%
ATTAGCAAACCCCACCTAGT+TGG + Chr2:67088518-67088537 MsG0280010272.01.T01:intron 45.0%
CAATGACATGTGAGCATGGT+AGG - Chr2:67084853-67084872 None:intergenic 45.0%
CACTGTCGATCAAGCATAAC+TGG - Chr2:67086759-67086778 None:intergenic 45.0%
CCAACTCTATCGTAATGTGG+AGG - Chr2:67089156-67089175 None:intergenic 45.0%
CCTCCACATTACGATAGAGT+TGG + Chr2:67089153-67089172 MsG0280010272.01.T01:CDS 45.0%
CCTGAAGCAATCACCATGAA+CGG + Chr2:67086408-67086427 MsG0280010272.01.T01:intron 45.0%
CTAAATGGCCCTGGGAAAAA+CGG - Chr2:67087255-67087274 None:intergenic 45.0%
CTGAGTGACATGATGACTGT+TGG - Chr2:67084703-67084722 None:intergenic 45.0%
CTTCAGGAACGAATCGGAAA+GGG - Chr2:67086395-67086414 None:intergenic 45.0%
CTTGTTCCGTTATGGCTGAA+GGG + Chr2:67087317-67087336 MsG0280010272.01.T01:intron 45.0%
CTTTCCCTCTCGTCTCTTTA+TGG - Chr2:67086301-67086320 None:intergenic 45.0%
GAGAGGGAAGTTGAAGGAAA+AGG - Chr2:67085831-67085850 None:intergenic 45.0%
GAGCGGTAGTATTCGAATGT+TGG - Chr2:67084379-67084398 None:intergenic 45.0%
GCCTGATTATGAAGGACTGA+AGG + Chr2:67084991-67085010 MsG0280010272.01.T01:intron 45.0%
GCTTAACGCCAAACACAAGA+AGG + Chr2:67086452-67086471 MsG0280010272.01.T01:intron 45.0%
GGCTCCTAAGTCCAAAATGT+TGG + Chr2:67088827-67088846 MsG0280010272.01.T01:intron 45.0%
GGGAATCCAAAAACACCTTC+TGG + Chr2:67089343-67089362 MsG0280010272.01.T01:CDS 45.0%
GTAGCAGGAACTGCATTTGA+TGG - Chr2:67089478-67089497 None:intergenic 45.0%
GTAGGTCAATTATACCGGGA+CGG + Chr2:67085468-67085487 MsG0280010272.01.T01:intron 45.0%
GTCACCTTGTATTCTCCCTT+TGG - Chr2:67084786-67084805 None:intergenic 45.0%
GTCCACCAATTACTCGCATT+AGG + Chr2:67085053-67085072 MsG0280010272.01.T01:intron 45.0%
GTCCTAATGCGAGTAATTGG+TGG - Chr2:67085058-67085077 None:intergenic 45.0%
GTGTTTGGCGTTAAGCTCTT+TGG - Chr2:67086448-67086467 None:intergenic 45.0%
GTTCTGCAACTCTTGACACT+TGG + Chr2:67088942-67088961 MsG0280010272.01.T01:CDS 45.0%
TAAAAGAGGACATGAGGCAG+CGG + Chr2:67084608-67084627 MsG0280010272.01.T01:intron 45.0%
TCAACTTTCTCAGTGTGCTG+AGG - Chr2:67089679-67089698 None:intergenic 45.0%
TCATGTCACTCAGTTTGACC+GGG + Chr2:67084710-67084729 MsG0280010272.01.T01:CDS 45.0%
TCGGTCCTAATGCGAGTAAT+TGG - Chr2:67085061-67085080 None:intergenic 45.0%
TCTTCGGTTTCCCTTCTCTT+CGG + Chr2:67087674-67087693 MsG0280010272.01.T01:intron 45.0%
TGACAGACATTCCAGACCAA+GGG - Chr2:67088083-67088102 None:intergenic 45.0%
TGCTATGTTCCATTAGCCCT+TGG + Chr2:67088064-67088083 MsG0280010272.01.T01:intron 45.0%
TGGTTCACCACCAGACATAT+TGG + Chr2:67084969-67084988 MsG0280010272.01.T01:intron 45.0%
TTATCTTCACGCAGTCCAGA+AGG - Chr2:67089361-67089380 None:intergenic 45.0%
TTTCTCAGTGTGCTGAGGTT+GGG - Chr2:67089674-67089693 None:intergenic 45.0%
! AAGAGATGGGTTTCAAGGGA+TGG + Chr2:67089322-67089341 MsG0280010272.01.T01:CDS 45.0%
! AAGGAGGACTTGTTCCGTTA+TGG + Chr2:67087309-67087328 MsG0280010272.01.T01:intron 45.0%
! AGAGATGGGTTTCAAGGGAT+GGG + Chr2:67089323-67089342 MsG0280010272.01.T01:CDS 45.0%
! ATAGTCTATCCGGTGCCAAT+AGG - Chr2:67085934-67085953 None:intergenic 45.0%
! CAGATCGAAAGGCTTTAGCA+TGG + Chr2:67084413-67084432 MsG0280010272.01.T01:CDS 45.0%
! CAGGAACTGCATTTGATGGT+TGG - Chr2:67089474-67089493 None:intergenic 45.0%
! CCATGTCCACTATTTTCTGC+AGG - Chr2:67089406-67089425 None:intergenic 45.0%
! GCTGAAGGGATTGATTTCAG+AGG + Chr2:67087331-67087350 MsG0280010272.01.T01:intron 45.0%
! GTTGCGTGGTACTGAAAAGT+AGG + Chr2:67085689-67085708 MsG0280010272.01.T01:intron 45.0%
!! ACATGATGATGGTCGACGAT+GGG + Chr2:67084471-67084490 MsG0280010272.01.T01:CDS 45.0%
!! AGTTTCAGCTTGTTGTTGCG+GGG - Chr2:67089709-67089728 None:intergenic 45.0%
!! CCTGCAGAAAATAGTGGACA+TGG + Chr2:67089403-67089422 MsG0280010272.01.T01:CDS 45.0%
!! TGGTGTTATGAGCATAAGCC+TGG - Chr2:67087220-67087239 None:intergenic 45.0%
ACAAACGCCGCATCTTCTCT+CGG - Chr2:67085101-67085120 None:intergenic 50.0%
AGAGAAGATGCGGCGTTTGT+AGG + Chr2:67085101-67085120 MsG0280010272.01.T01:intron 50.0%
AGCGTGTGGGCCAAAAACAA+TGG + Chr2:67086190-67086209 MsG0280010272.01.T01:intron 50.0%
AGTTGTTACTCCCTCCGTCT+CGG + Chr2:67085261-67085280 MsG0280010272.01.T01:intron 50.0%
ATGGTCGATGGTTTCACGGA+CGG - Chr2:67084751-67084770 None:intergenic 50.0%
CAATCTTTGCGGGAATGACC+AGG - Chr2:67085130-67085149 None:intergenic 50.0%
CAATGGGAGAGGGAAGTTGA+AGG - Chr2:67085837-67085856 None:intergenic 50.0%
CAGAGGCCTGCAGAAAATAG+TGG + Chr2:67089397-67089416 MsG0280010272.01.T01:CDS 50.0%
CAGTTCCTGCTACAAGACGT+AGG + Chr2:67089485-67089504 MsG0280010272.01.T01:CDS 50.0%
CATTCCAGACCAAGGGCTAA+TGG - Chr2:67088076-67088095 None:intergenic 50.0%
CCGTTCATGGTGATTGCTTC+AGG - Chr2:67086411-67086430 None:intergenic 50.0%
CCTCTCAACTTGGAGTTGAG+AGG - Chr2:67085575-67085594 None:intergenic 50.0%
CTGCAACAGCGATTTCAGAG+CGG - Chr2:67084396-67084415 None:intergenic 50.0%
CTTTCTCAGTGTGCTGAGGT+TGG - Chr2:67089675-67089694 None:intergenic 50.0%
GAGAAGGGAAACCGAAGATG+TGG - Chr2:67087672-67087691 None:intergenic 50.0%
GAGTTAGGTGAGACCCTTGA+AGG - Chr2:67087154-67087173 None:intergenic 50.0%
GCTTCAGGAACGAATCGGAA+AGG - Chr2:67086396-67086415 None:intergenic 50.0%
GGGCCACATGACAAGTAACT+TGG + Chr2:67084492-67084511 MsG0280010272.01.T01:CDS 50.0%
GGTTTCCACATCGTCCATCT+CGG - Chr2:67085080-67085099 None:intergenic 50.0%
GTGGAAACCGAGAGAAGATG+CGG + Chr2:67085091-67085110 MsG0280010272.01.T01:intron 50.0%
TACTCGCATTAGGACCGAGA+TGG + Chr2:67085063-67085082 MsG0280010272.01.T01:intron 50.0%
TACTTTGCAGAGCTCCGAGA+TGG + Chr2:67087962-67087981 MsG0280010272.01.T01:intron 50.0%
TCACTCAGTTTGACCGGGAT+CGG + Chr2:67084715-67084734 MsG0280010272.01.T01:CDS 50.0%
TCTGCACATTCCCGATTCTC+TGG - Chr2:67087760-67087779 None:intergenic 50.0%
TGAAGTAGATGCGGAAGGTG+GGG - Chr2:67085886-67085905 None:intergenic 50.0%
TGCATAAACACTGCCGGAGT+CGG - Chr2:67088664-67088683 None:intergenic 50.0%
TGCTGACATGAGATCCGGAT+AGG - Chr2:67087823-67087842 None:intergenic 50.0%
TGGTGGTTACCTATTGGCAC+CGG + Chr2:67085922-67085941 MsG0280010272.01.T01:intron 50.0%
TGTTCCATTAGCCCTTGGTC+TGG + Chr2:67088069-67088088 MsG0280010272.01.T01:intron 50.0%
TTAGGTGAGACCCTTGAAGG+TGG - Chr2:67087151-67087170 None:intergenic 50.0%
TTCCCAACAAGTCCATGCGT+CGG + Chr2:67085017-67085036 MsG0280010272.01.T01:intron 50.0%
! CCTCTCAACTCCAAGTTGAG+AGG + Chr2:67085572-67085591 MsG0280010272.01.T01:intron 50.0%
! TCATTTGGGATGGACTCTCC+AGG + Chr2:67087199-67087218 MsG0280010272.01.T01:intron 50.0%
! TCGAAAGGCTTTAGCATGGG+TGG + Chr2:67084417-67084436 MsG0280010272.01.T01:CDS 50.0%
!! AACGTTGGCCTTTCCGTTCA+TGG - Chr2:67086424-67086443 None:intergenic 50.0%
!! AGGGGTACTTTGAGCTGTGT+CGG - Chr2:67089745-67089764 None:intergenic 50.0%
!! CACATGATGATGGTCGACGA+TGG + Chr2:67084470-67084489 MsG0280010272.01.T01:CDS 50.0%
!! CATGATGATGGTCGACGATG+GGG + Chr2:67084472-67084491 MsG0280010272.01.T01:CDS 50.0%
!! GCGGCCTTGTTTGCTAAAAG+AGG + Chr2:67084594-67084613 MsG0280010272.01.T01:intron 50.0%
!! GCTTTTAGGTACCTCGCAAC+TGG + Chr2:67085664-67085683 MsG0280010272.01.T01:intron 50.0%
!! TTACTGCGAATCACCGACTC+CGG + Chr2:67088648-67088667 MsG0280010272.01.T01:intron 50.0%
!!! CGCAGTCCAGAAGGTGTTTT+TGG - Chr2:67089352-67089371 None:intergenic 50.0%
AAGTAGATGCGGAAGGTGGG+GGG - Chr2:67085884-67085903 None:intergenic 55.0%
ACCTTTCTTTGCCCGACGCA+TGG - Chr2:67085032-67085051 None:intergenic 55.0%
AGGGTCTCACCTAACTCGTG+AGG + Chr2:67087157-67087176 MsG0280010272.01.T01:intron 55.0%
GAAGTAGATGCGGAAGGTGG+GGG - Chr2:67085885-67085904 None:intergenic 55.0%
GATGGTTTCACGGACGGAGA+AGG - Chr2:67084745-67084764 None:intergenic 55.0%
GCAGCGGCAAGGGTAAATTC+TGG + Chr2:67084624-67084643 MsG0280010272.01.T01:intron 55.0%
GCCATTTCCAGTTGCGTGGT+GGG + Chr2:67085634-67085653 MsG0280010272.01.T01:intron 55.0%
GCGGCAATGACATGTGAGCA+TGG - Chr2:67084857-67084876 None:intergenic 55.0%
GGAACCCTACGTCTTGTAGC+AGG - Chr2:67089493-67089512 None:intergenic 55.0%
GGATCTGAAGGGGTCCTATC+CGG + Chr2:67087806-67087825 MsG0280010272.01.T01:intron 55.0%
GGTCAATTATACCGGGACGG+AGG + Chr2:67085471-67085490 MsG0280010272.01.T01:intron 55.0%
GGTCAGTTATCCGAGACGGA+GGG - Chr2:67085274-67085293 None:intergenic 55.0%
TAGGACCGAGATGGACGATG+TGG + Chr2:67085072-67085091 MsG0280010272.01.T01:intron 55.0%
TCCATGCGTCGGGCAAAGAA+AGG + Chr2:67085028-67085047 MsG0280010272.01.T01:intron 55.0%
TCCCAACAAGTCCATGCGTC+GGG + Chr2:67085018-67085037 MsG0280010272.01.T01:intron 55.0%
! CGGAGAAGGTATACCGATCC+CGG - Chr2:67084731-67084750 None:intergenic 55.0%
! CTTTGAGCTGTGTCGGTAGC+CGG - Chr2:67089738-67089757 None:intergenic 55.0%
!! AGCTTGTTGTTGCGGGGTAC+TGG - Chr2:67089703-67089722 None:intergenic 55.0%
AGGACATGAGGCAGCGGCAA+GGG + Chr2:67084614-67084633 MsG0280010272.01.T01:intron 60.0%
AGTAGATGCGGAAGGTGGGG+GGG - Chr2:67085883-67085902 None:intergenic 60.0%
CCACGCAACTGGAAATGGCG+AGG - Chr2:67085633-67085652 None:intergenic 60.0%
CCTCGCCATTTCCAGTTGCG+TGG + Chr2:67085630-67085649 MsG0280010272.01.T01:intron 60.0%
CGCCATTTCCAGTTGCGTGG+TGG + Chr2:67085633-67085652 MsG0280010272.01.T01:intron 60.0%
GCAGGCCTCTGCTGATGTGA+AGG - Chr2:67089388-67089407 None:intergenic 60.0%
GCCCACCACGCAACTGGAAA+TGG - Chr2:67085638-67085657 None:intergenic 60.0%
GGGTCAGTTATCCGAGACGG+AGG - Chr2:67085275-67085294 None:intergenic 60.0%
GGTGGTGAACCACGTCGAAG+TGG - Chr2:67084961-67084980 None:intergenic 60.0%
GTGTGCTGAGGTTGGGTAGC+AGG - Chr2:67089667-67089686 None:intergenic 60.0%
TAGGGTTCCAGCTCCTCGCA+AGG + Chr2:67089504-67089523 MsG0280010272.01.T01:CDS 60.0%
TCCAGCTCCTCGCAAGGTAC+CGG + Chr2:67089510-67089529 MsG0280010272.01.T01:CDS 60.0%
TGCCCGACGCATGGACTTGT+TGG - Chr2:67085023-67085042 None:intergenic 60.0%
TGCGGCGTTTGTAGGATGCC+TGG + Chr2:67085109-67085128 MsG0280010272.01.T01:intron 60.0%
TGGGGGGGTGATTGAGGAGA+AGG - Chr2:67085868-67085887 None:intergenic 60.0%
! GCCCGACGCATGGACTTGTT+GGG - Chr2:67085022-67085041 None:intergenic 60.0%
! TTGCTGAGCTGTGCTGCTGC+AGG + Chr2:67088585-67088604 MsG0280010272.01.T01:intron 60.0%
!! TGGTGGGCGCTGCAGCTTTT+AGG + Chr2:67085650-67085669 MsG0280010272.01.T01:intron 60.0%
ACCTGCTCCGGTACCTTGCG+AGG - Chr2:67089520-67089539 None:intergenic 65.0%
CCACGCAACTGCCAGTTGCG+AGG - Chr2:67085678-67085697 None:intergenic 65.0%
CCTCGCAACTGGCAGTTGCG+TGG + Chr2:67085675-67085694 MsG0280010272.01.T01:intron 65.0%
GAGGACATGAGGCAGCGGCA+AGG + Chr2:67084613-67084632 MsG0280010272.01.T01:intron 65.0%
GGAAGGTGGGGGGGTGATTG+AGG - Chr2:67085874-67085893 None:intergenic 65.0%
TCCGGTACCTTGCGAGGAGC+TGG - Chr2:67089514-67089533 None:intergenic 65.0%
!! TCCTCGCAAGGTACCGGAGC+AGG + Chr2:67089516-67089535 MsG0280010272.01.T01:CDS 65.0%
TGCAGCGCCCACCACGCAAC+TGG - Chr2:67085644-67085663 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 67084367 67089774 67084367 ID=MsG0280010272.01;Name=MsG0280010272.01
Chr2 mRNA 67084367 67089774 67084367 ID=MsG0280010272.01.T01;Parent=MsG0280010272.01;Name=MsG0280010272.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0.77|0.8|1|0.77|0.6|10|0|276
Chr2 exon 67089658 67089774 67089658 ID=MsG0280010272.01.T01:exon:7116;Parent=MsG0280010272.01.T01
Chr2 exon 67089312 67089537 67089312 ID=MsG0280010272.01.T01:exon:7115;Parent=MsG0280010272.01.T01
Chr2 exon 67089109 67089199 67089109 ID=MsG0280010272.01.T01:exon:7114;Parent=MsG0280010272.01.T01
Chr2 exon 67088938 67088992 67088938 ID=MsG0280010272.01.T01:exon:7113;Parent=MsG0280010272.01.T01
Chr2 exon 67084683 67084800 67084683 ID=MsG0280010272.01.T01:exon:7112;Parent=MsG0280010272.01.T01
Chr2 exon 67084367 67084590 67084367 ID=MsG0280010272.01.T01:exon:7111;Parent=MsG0280010272.01.T01
Chr2 CDS 67084367 67084590 67084367 ID=MsG0280010272.01.T01:cds;Parent=MsG0280010272.01.T01
Chr2 CDS 67084683 67084800 67084683 ID=MsG0280010272.01.T01:cds;Parent=MsG0280010272.01.T01
Chr2 CDS 67088938 67088992 67088938 ID=MsG0280010272.01.T01:cds;Parent=MsG0280010272.01.T01
Chr2 CDS 67089109 67089199 67089109 ID=MsG0280010272.01.T01:cds;Parent=MsG0280010272.01.T01
Chr2 CDS 67089312 67089537 67089312 ID=MsG0280010272.01.T01:cds;Parent=MsG0280010272.01.T01
Chr2 CDS 67089658 67089774 67089658 ID=MsG0280010272.01.T01:cds;Parent=MsG0280010272.01.T01
Gene Sequence

>MsG0280010272.01.T01

ATGAACATCCCAACATTCGAATACTACCGCTCTGAAATCGCTGTTGCAGATCGAAAGGCTTTAGCATGGGTGGACAACATTCCTAAAGAAAAGTGGACTCAATCACATGATGATGGTCGACGATGGGGCCACATGACAAGTAACTTGGTAGAGTCACAAAACAACGTGTATAAGGGTATTCGAGGACTCCCGATCACAGCTATTGTGAAAGCATCATATTACAGGGATGAGGCTCATAAATCCAACAGTCATCATGTCACTCAGTTTGACCGGGATCGGTATACCTTCTCCGTCCGTGAAACCATCGACCATAAAGAAGGATTACCAAAGGGAGAATACAAGGTTCGTTCTGCAACTCTTGACACTTGGCTTCCAGAGCAAGTTGCATTCATTCAATCAATGGGAAACGAGAAAGCAAATAGCTACTGGGAAGCAGAATTACCTCCACATTACGATAGAGTTGGACTTGAAAATTTTATTCGCGCAAAGTATGAAGACAAGAGATGGGTTTCAAGGGATGGGAATCCAAAAACACCTTCTGGACTGCGTGAAGATAAATCTCCTTCACATCAGCAGAGGCCTGCAGAAAATAGTGGACATGGTTATGCCACTGTTGCTGAGAATACTTTTGAAGAAAGGAAGAAAATCCAACCATCAAATGCAGTTCCTGCTACAAGACGTAGGGTTCCAGCTCCTCGCAAGGTACCGGAGCAGGTAACTCCTGCTACCCAACCTCAGCACACTGAGAAAGTTGAACCAGTACCCCGCAACAACAAGCTGAAACTTCAAAGCCGGCTACCGACACAGCTCAAAGTACCCCTCCCAAAGTAG
Protein sequence

>MsG0280010272.01.T01

MNIPTFEYYRSEIAVADRKALAWVDNIPKEKWTQSHDDGRRWGHMTSNLVESQNNVYKGIRGLPITAIVKASYYRDEAHKSNSHHVTQFDRDRYTFSVRETIDHKEGLPKGEYKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPHYDRVGLENFIRAKYEDKRWVSRDGNPKTPSGLREDKSPSHQQRPAENSGHGYATVAENTFEERKKIQPSNAVPATRRRVPAPRKVPEQVTPATQPQHTEKVEPVPRNNKLKLQSRLPTQLKVPLPK*