Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010556.01.T01 | XP_003596890.1 | 98.187 | 386 | 6 | 1 | 1 | 386 | 19 | 403 | 0 | 767 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010556.01.T01 | Q84TG3 | 54.359 | 390 | 170 | 4 | 1 | 386 | 25 | 410 | 7.16E-147 | 425 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010556.01.T01 | G7IHK3 | 98.187 | 386 | 6 | 1 | 1 | 386 | 19 | 403 | 0.0 | 767 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0280010556.01 | MsG0280010735.01 | 0.814244 | 1.700519e-51 | 1.135057e-48 |
| MsG0280010556.01 | MsG0280010823.01 | 0.802761 | 4.812603e-49 | 2.376989e-46 |
| MsG0280010556.01 | MsG0280010866.01 | 0.815004 | 1.154099e-51 | 7.863388e-49 |
| MsG0280010556.01 | MsG0480019395.01 | 0.813712 | 2.227793e-51 | 1.465762e-48 |
| MsG0280010556.01 | MsG0480021914.01 | 0.807630 | 4.601178e-50 | 2.575592e-47 |
| MsG0280010556.01 | MsG0480022398.01 | 0.821608 | 3.688891e-53 | 3.015288e-50 |
| MsG0280010556.01 | MsG0580024770.01 | 0.805245 | 1.465075e-49 | 7.712494e-47 |
| MsG0280010556.01 | MsG0780038888.01 | 0.808647 | 2.794502e-50 | 1.606511e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010556.01.T01 | MTR_2g087350 | 98.187 | 386 | 6 | 1 | 1 | 386 | 19 | 403 | 0.0 | 767 |
| MsG0280010556.01.T01 | MTR_7g106340 | 59.000 | 400 | 148 | 6 | 1 | 386 | 21 | 418 | 7.31e-154 | 441 |
| MsG0280010556.01.T01 | MTR_1g056880 | 54.327 | 416 | 159 | 4 | 1 | 386 | 20 | 434 | 1.08e-148 | 428 |
| MsG0280010556.01.T01 | MTR_1g056870 | 53.365 | 416 | 163 | 4 | 1 | 386 | 20 | 434 | 4.45e-144 | 416 |
| MsG0280010556.01.T01 | MTR_1g056840 | 50.000 | 416 | 151 | 5 | 1 | 386 | 20 | 408 | 2.03e-129 | 378 |
| MsG0280010556.01.T01 | MTR_1g056910 | 43.814 | 388 | 201 | 10 | 1 | 378 | 19 | 399 | 3.01e-90 | 278 |
| MsG0280010556.01.T01 | MTR_4g051515 | 37.121 | 396 | 235 | 8 | 1 | 385 | 19 | 411 | 2.01e-76 | 242 |
| MsG0280010556.01.T01 | MTR_3g065080 | 33.333 | 402 | 237 | 10 | 1 | 385 | 49 | 436 | 4.58e-52 | 179 |
| MsG0280010556.01.T01 | MTR_5g048050 | 35.142 | 387 | 221 | 12 | 1 | 366 | 38 | 415 | 2.56e-51 | 177 |
| MsG0280010556.01.T01 | MTR_6g071340 | 34.625 | 387 | 223 | 12 | 1 | 366 | 18 | 395 | 3.46e-50 | 174 |
| MsG0280010556.01.T01 | MTR_5g077510 | 34.184 | 392 | 232 | 11 | 1 | 377 | 48 | 428 | 3.83e-49 | 172 |
| MsG0280010556.01.T01 | MTR_4g085720 | 34.375 | 384 | 230 | 14 | 1 | 375 | 27 | 397 | 5.68e-40 | 147 |
| MsG0280010556.01.T01 | MTR_8g092870 | 28.497 | 386 | 244 | 9 | 1 | 366 | 23 | 396 | 1.75e-34 | 132 |
| MsG0280010556.01.T01 | MTR_5g015210 | 28.571 | 371 | 244 | 10 | 1 | 368 | 80 | 432 | 2.16e-25 | 107 |
| MsG0280010556.01.T01 | MTR_3g095730 | 27.249 | 378 | 257 | 11 | 1 | 366 | 26 | 397 | 3.80e-24 | 103 |
| MsG0280010556.01.T01 | MTR_4g063800 | 31.310 | 313 | 180 | 11 | 1 | 299 | 268 | 559 | 1.19e-23 | 103 |
| MsG0280010556.01.T01 | MTR_3g096370 | 28.827 | 392 | 241 | 14 | 1 | 371 | 23 | 397 | 6.82e-23 | 99.8 |
| MsG0280010556.01.T01 | MTR_1g094215 | 29.530 | 298 | 184 | 10 | 1 | 287 | 77 | 359 | 9.71e-17 | 82.0 |
| MsG0280010556.01.T01 | MTR_1g094215 | 29.530 | 298 | 184 | 10 | 1 | 287 | 260 | 542 | 4.24e-16 | 80.5 |
| MsG0280010556.01.T01 | MTR_5g083030 | 23.469 | 392 | 259 | 15 | 1 | 366 | 306 | 682 | 4.89e-16 | 80.5 |
| MsG0280010556.01.T01 | MTR_1g017770 | 25.515 | 388 | 271 | 10 | 1 | 384 | 58 | 431 | 1.79e-14 | 75.1 |
| MsG0280010556.01.T01 | MTR_4g485520 | 27.148 | 291 | 179 | 10 | 1 | 275 | 118 | 391 | 6.07e-14 | 73.6 |
| MsG0280010556.01.T01 | MTR_4g485520 | 27.148 | 291 | 179 | 10 | 1 | 275 | 286 | 559 | 7.49e-14 | 73.6 |
| MsG0280010556.01.T01 | MTR_4g028960 | 28.788 | 198 | 118 | 6 | 1 | 181 | 293 | 484 | 1.96e-13 | 72.4 |
| MsG0280010556.01.T01 | MTR_7g078330 | 27.239 | 268 | 177 | 9 | 1 | 263 | 287 | 541 | 1.06e-12 | 70.1 |
| MsG0280010556.01.T01 | MTR_4g091880 | 26.260 | 377 | 238 | 15 | 1 | 366 | 18 | 365 | 3.30e-12 | 67.8 |
| MsG0280010556.01.T01 | MTR_4g091880 | 26.542 | 373 | 214 | 15 | 1 | 366 | 18 | 337 | 7.12e-12 | 66.6 |
| MsG0280010556.01.T01 | MTR_5g034440 | 50.794 | 63 | 27 | 2 | 1 | 63 | 293 | 351 | 2.34e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010556.01.T01 | AT2G35930 | 54.359 | 390 | 170 | 4 | 1 | 386 | 25 | 410 | 7.30e-148 | 425 |
| MsG0280010556.01.T01 | AT3G52450 | 50.957 | 418 | 170 | 4 | 1 | 386 | 20 | 434 | 7.58e-143 | 413 |
| MsG0280010556.01.T01 | AT3G11840 | 37.037 | 432 | 213 | 11 | 1 | 383 | 23 | 444 | 9.62e-69 | 224 |
| MsG0280010556.01.T01 | AT3G19380 | 32.778 | 360 | 223 | 8 | 1 | 349 | 27 | 378 | 3.18e-43 | 155 |
| MsG0280010556.01.T01 | AT1G49780 | 31.552 | 393 | 242 | 11 | 1 | 377 | 27 | 408 | 3.54e-42 | 153 |
| MsG0280010556.01.T01 | AT1G66160 | 31.688 | 385 | 229 | 12 | 1 | 372 | 46 | 409 | 3.30e-39 | 145 |
| MsG0280010556.01.T01 | AT5G37490 | 28.718 | 390 | 254 | 13 | 1 | 377 | 44 | 422 | 2.25e-37 | 140 |
| MsG0280010556.01.T01 | AT1G66160 | 28.883 | 367 | 227 | 12 | 19 | 372 | 48 | 393 | 3.29e-26 | 109 |
| MsG0280010556.01.T01 | AT5G09800 | 26.862 | 376 | 253 | 8 | 1 | 366 | 24 | 387 | 5.80e-26 | 108 |
| MsG0280010556.01.T01 | AT3G49810 | 26.963 | 382 | 254 | 11 | 1 | 377 | 77 | 438 | 6.46e-24 | 103 |
| MsG0280010556.01.T01 | AT3G18710 | 26.972 | 393 | 237 | 17 | 1 | 366 | 25 | 394 | 1.58e-21 | 95.9 |
| MsG0280010556.01.T01 | AT5G65920 | 28.385 | 384 | 246 | 13 | 1 | 377 | 73 | 434 | 3.13e-21 | 95.1 |
| MsG0280010556.01.T01 | AT5G65920 | 28.385 | 384 | 246 | 13 | 1 | 377 | 73 | 434 | 3.13e-21 | 95.1 |
| MsG0280010556.01.T01 | AT3G46510 | 29.293 | 297 | 188 | 8 | 1 | 288 | 269 | 552 | 1.16e-19 | 91.3 |
| MsG0280010556.01.T01 | AT3G54850 | 29.412 | 289 | 174 | 10 | 1 | 275 | 261 | 533 | 2.10e-18 | 87.4 |
| MsG0280010556.01.T01 | AT5G64660 | 25.707 | 389 | 253 | 11 | 1 | 366 | 23 | 398 | 4.92e-18 | 85.5 |
| MsG0280010556.01.T01 | AT2G28830 | 28.882 | 322 | 181 | 13 | 1 | 299 | 197 | 493 | 7.35e-18 | 85.9 |
| MsG0280010556.01.T01 | AT1G23030 | 25.333 | 375 | 241 | 14 | 1 | 363 | 254 | 601 | 8.55e-18 | 85.5 |
| MsG0280010556.01.T01 | AT3G02840 | 26.498 | 317 | 210 | 9 | 67 | 365 | 40 | 351 | 4.35e-16 | 79.3 |
| MsG0280010556.01.T01 | AT5G42340 | 29.344 | 259 | 163 | 8 | 1 | 254 | 303 | 546 | 4.26e-15 | 77.4 |
| MsG0280010556.01.T01 | AT1G71020 | 28.866 | 291 | 173 | 10 | 1 | 274 | 108 | 381 | 1.73e-14 | 75.1 |
| MsG0280010556.01.T01 | AT1G71020 | 28.866 | 291 | 173 | 10 | 1 | 274 | 256 | 529 | 1.76e-14 | 75.5 |
| MsG0280010556.01.T01 | AT4G21350 | 28.428 | 299 | 182 | 13 | 1 | 290 | 18 | 293 | 6.43e-12 | 67.0 |
| MsG0280010556.01.T01 | AT1G10560 | 26.596 | 282 | 169 | 13 | 1 | 261 | 301 | 565 | 1.20e-11 | 66.6 |
| MsG0280010556.01.T01 | AT1G60190 | 28.485 | 330 | 201 | 15 | 1 | 311 | 291 | 604 | 5.16e-11 | 64.7 |
Find 47 sgRNAs with CRISPR-Local
Find 64 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTATCTATTGGTGATTT+TGG | 0.172462 | 2:+71413793 | None:intergenic |
| ATTAAGATCGGTTTCTAATA+AGG | 0.216355 | 2:+71413903 | None:intergenic |
| GAATTATGAGTTCTATTTGT+AGG | 0.259477 | 2:-71413060 | MsG0280010556.01.T01:CDS |
| AGAATCTGTGTTCTATCTAT+TGG | 0.283687 | 2:+71413784 | None:intergenic |
| TAACAGGACAAGTATTGTTT+TGG | 0.288313 | 2:+71413935 | None:intergenic |
| GTTTGTGAATTGATGTTAAT+AGG | 0.315892 | 2:-71413205 | MsG0280010556.01.T01:CDS |
| AGCTGCATTGAAACTACTTC+TGG | 0.340268 | 2:-71413323 | MsG0280010556.01.T01:CDS |
| TCAAATTGCATTCTTCTGTT+TGG | 0.342684 | 2:-71412919 | MsG0280010556.01.T01:CDS |
| TGAATTGATGTTAATAGGTT+TGG | 0.347580 | 2:-71413200 | MsG0280010556.01.T01:CDS |
| TGCAACAATGTTGTTGAAAT+CGG | 0.378087 | 2:-71413449 | MsG0280010556.01.T01:CDS |
| TGTACTCTTAATGCTTCATT+TGG | 0.394264 | 2:-71413835 | MsG0280010556.01.T01:CDS |
| CGCCTTCTACTGCTTTAATT+CGG | 0.395837 | 2:+71413278 | None:intergenic |
| TGAATTTAAATTGTTCTTCA+CGG | 0.404777 | 2:+71413624 | None:intergenic |
| TTTACGCTTATTAATTGAAT+CGG | 0.416226 | 2:+71413409 | None:intergenic |
| CATCGAAAAGAAGTTCGATT+AGG | 0.431603 | 2:+71413242 | None:intergenic |
| TAAGAAGATAACAATGGAAC+AGG | 0.433703 | 2:+71412878 | None:intergenic |
| AGCAGTTTCAAAGCTGTGTT+TGG | 0.435353 | 2:-71412993 | MsG0280010556.01.T01:CDS |
| GAATCAAACGGCGTAATGTA+TGG | 0.437462 | 2:+71413866 | None:intergenic |
| TCTCATGTTGCAAGTGATAG+AGG | 0.444489 | 2:-71413088 | MsG0280010556.01.T01:CDS |
| ATAGGTTTGGATCAACTTTG+TGG | 0.448018 | 2:-71413187 | MsG0280010556.01.T01:CDS |
| TACGCCGTTTGATTCAATCT+TGG | 0.449211 | 2:-71413858 | MsG0280010556.01.T01:CDS |
| GTTGAATCATGGAGCAGGAT+TGG | 0.460789 | 2:-71413140 | MsG0280010556.01.T01:CDS |
| AAACGGCGTAATGTATGGTT+TGG | 0.468631 | 2:+71413871 | None:intergenic |
| AACCGAATTAAAGCAGTAGA+AGG | 0.473038 | 2:-71413280 | MsG0280010556.01.T01:CDS |
| TTGTTGCATAACCTCTAGAT+TGG | 0.480327 | 2:+71413464 | None:intergenic |
| TTCTTAACATGTTCTTCAGA+AGG | 0.502761 | 2:+71413553 | None:intergenic |
| CAACTTTGTGGATGTGCAGA+AGG | 0.502794 | 2:-71413175 | MsG0280010556.01.T01:CDS |
| AGAGCAGAATTGTTGAATCA+TGG | 0.508106 | 2:-71413151 | MsG0280010556.01.T01:CDS |
| TTAATTCGGTTTCTTCCCCA+TGG | 0.519244 | 2:+71413292 | None:intergenic |
| TGGTATAAGATTATTAAGAT+CGG | 0.523228 | 2:+71413891 | None:intergenic |
| ATTCCTGTGGAAAGTGTGAC+AGG | 0.532480 | 2:+71414000 | None:intergenic |
| TCTTAACATGTTCTTCAGAA+GGG | 0.540334 | 2:+71413554 | None:intergenic |
| GAATTGTTGAATCATGGAGC+AGG | 0.540550 | 2:-71413145 | MsG0280010556.01.T01:CDS |
| TTTCGATGTTTCGGAAAGAA+GGG | 0.546039 | 2:-71413227 | MsG0280010556.01.T01:CDS |
| GCTTATTAATTGAATCGGAT+CGG | 0.551948 | 2:+71413414 | None:intergenic |
| TACACCAAGATTGAATCAAA+CGG | 0.572791 | 2:+71413854 | None:intergenic |
| TTACATGAAATGTTGCATGT+TGG | 0.580927 | 2:-71413016 | MsG0280010556.01.T01:CDS |
| CAAGACAAAAGAGAGGGCTA+AGG | 0.587076 | 2:-71412948 | MsG0280010556.01.T01:CDS |
| CATGGATAAGAAGATAACAA+TGG | 0.624457 | 2:+71412872 | None:intergenic |
| AACTTTGTGGATGTGCAGAA+GGG | 0.628187 | 2:-71413174 | MsG0280010556.01.T01:CDS |
| CTTGGAAGCTACCAATCTAG+AGG | 0.628941 | 2:-71413475 | MsG0280010556.01.T01:CDS |
| GATCCTGTCACACTTTCCAC+AGG | 0.633717 | 2:-71414003 | MsG0280010556.01.T01:CDS |
| GTAATTTCAAGACAAAAGAG+AGG | 0.637702 | 2:-71412955 | MsG0280010556.01.T01:CDS |
| TAATTTCAAGACAAAAGAGA+GGG | 0.648697 | 2:-71412954 | MsG0280010556.01.T01:CDS |
| TCTGTCGTAGGTAATTCCTG+TGG | 0.655080 | 2:+71413987 | None:intergenic |
| CGAATTAAAGCAGTAGAAGG+CGG | 0.682590 | 2:-71413277 | MsG0280010556.01.T01:CDS |
| TAAAGCAGTAGAAGGCGGCG+CGG | 0.742253 | 2:-71413272 | MsG0280010556.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAATTAATAAGCGTAAAAA+AGG | - | Chr2:71413476-71413495 | MsG0280010556.01.T01:CDS | 20.0% |
| !! | TGAAAGAAACAAAAAATGTT+TGG | - | Chr2:71413200-71413219 | MsG0280010556.01.T01:CDS | 20.0% |
| !! | TGAATTTAAATTGTTCTTCA+CGG | + | Chr2:71413259-71413278 | None:intergenic | 20.0% |
| !! | TGGTATAAGATTATTAAGAT+CGG | + | Chr2:71412992-71413011 | None:intergenic | 20.0% |
| !! | TTTACGCTTATTAATTGAAT+CGG | + | Chr2:71413474-71413493 | None:intergenic | 20.0% |
| !!! | TGTATCAAAGAAAATTTTGA+GGG | - | Chr2:71413767-71413786 | MsG0280010556.01.T01:CDS | 20.0% |
| !!! | TTGTATCAAAGAAAATTTTG+AGG | - | Chr2:71413766-71413785 | MsG0280010556.01.T01:CDS | 20.0% |
| ! | ACAGAGAAAACATAGAAAAA+TGG | - | Chr2:71412911-71412930 | MsG0280010556.01.T01:CDS | 25.0% |
| ! | GAATTATGAGTTCTATTTGT+AGG | - | Chr2:71413820-71413839 | MsG0280010556.01.T01:CDS | 25.0% |
| ! | GTTTGTGAATTGATGTTAAT+AGG | - | Chr2:71413675-71413694 | MsG0280010556.01.T01:CDS | 25.0% |
| ! | TAATTTCAAGACAAAAGAGA+GGG | - | Chr2:71413926-71413945 | MsG0280010556.01.T01:CDS | 25.0% |
| ! | TGAATTGATGTTAATAGGTT+TGG | - | Chr2:71413680-71413699 | MsG0280010556.01.T01:CDS | 25.0% |
| !! | ATTAAGATCGGTTTCTAATA+AGG | + | Chr2:71412980-71412999 | None:intergenic | 25.0% |
| !!! | AATAAGGTTTGTTTTGTAAC+AGG | + | Chr2:71412964-71412983 | None:intergenic | 25.0% |
| AGAATCTGTGTTCTATCTAT+TGG | + | Chr2:71413099-71413118 | None:intergenic | 30.0% | |
| CATGGATAAGAAGATAACAA+TGG | + | Chr2:71414011-71414030 | None:intergenic | 30.0% | |
| GCTTATTAATTGAATCGGAT+CGG | + | Chr2:71413469-71413488 | None:intergenic | 30.0% | |
| GTAATTTCAAGACAAAAGAG+AGG | - | Chr2:71413925-71413944 | MsG0280010556.01.T01:CDS | 30.0% | |
| TAAGAAGATAACAATGGAAC+AGG | + | Chr2:71414005-71414024 | None:intergenic | 30.0% | |
| TACACCAAGATTGAATCAAA+CGG | + | Chr2:71413029-71413048 | None:intergenic | 30.0% | |
| TCAAATTGCATTCTTCTGTT+TGG | - | Chr2:71413961-71413980 | MsG0280010556.01.T01:CDS | 30.0% | |
| TCTTAACATGTTCTTCAGAA+GGG | + | Chr2:71413329-71413348 | None:intergenic | 30.0% | |
| TGCAACAATGTTGTTGAAAT+CGG | - | Chr2:71413431-71413450 | MsG0280010556.01.T01:CDS | 30.0% | |
| TGTACTCTTAATGCTTCATT+TGG | - | Chr2:71413045-71413064 | MsG0280010556.01.T01:CDS | 30.0% | |
| TTACATGAAATGTTGCATGT+TGG | - | Chr2:71413864-71413883 | MsG0280010556.01.T01:CDS | 30.0% | |
| TTCTTAACATGTTCTTCAGA+AGG | + | Chr2:71413330-71413349 | None:intergenic | 30.0% | |
| ! | AAAAAATGTTTGGAATCTGC+AGG | - | Chr2:71413210-71413229 | MsG0280010556.01.T01:CDS | 30.0% |
| !! | GTTCTATCTATTGGTGATTT+TGG | + | Chr2:71413090-71413109 | None:intergenic | 30.0% |
| !! | TAACAGGACAAGTATTGTTT+TGG | + | Chr2:71412948-71412967 | None:intergenic | 30.0% |
| !!! | AGACAATTGAGTTGTTTTTC+TGG | + | Chr2:71413150-71413169 | None:intergenic | 30.0% |
| !!! | GACAATTGAGTTGTTTTTCT+GGG | + | Chr2:71413149-71413168 | None:intergenic | 30.0% |
| !!! | TTGTTTCATGTTTTGAAGCT+TGG | - | Chr2:71413387-71413406 | MsG0280010556.01.T01:CDS | 30.0% |
| AACCGAATTAAAGCAGTAGA+AGG | - | Chr2:71413600-71413619 | MsG0280010556.01.T01:CDS | 35.0% | |
| AGAGCAGAATTGTTGAATCA+TGG | - | Chr2:71413729-71413748 | MsG0280010556.01.T01:CDS | 35.0% | |
| ATAGGTTTGGATCAACTTTG+TGG | - | Chr2:71413693-71413712 | MsG0280010556.01.T01:CDS | 35.0% | |
| CATCGAAAAGAAGTTCGATT+AGG | + | Chr2:71413641-71413660 | None:intergenic | 35.0% | |
| TTGTTGCATAACCTCTAGAT+TGG | + | Chr2:71413419-71413438 | None:intergenic | 35.0% | |
| TTTCGATGTTTCGGAAAGAA+GGG | - | Chr2:71413653-71413672 | MsG0280010556.01.T01:CDS | 35.0% | |
| ! | CGAACTTCTTTTCGATGTTT+CGG | - | Chr2:71413644-71413663 | MsG0280010556.01.T01:CDS | 35.0% |
| ! | TTCTATGTTTTCTCTGTCGT+AGG | + | Chr2:71412908-71412927 | None:intergenic | 35.0% |
| ! | TTTTCGATGTTTCGGAAAGA+AGG | - | Chr2:71413652-71413671 | MsG0280010556.01.T01:CDS | 35.0% |
| !! | TCTATTGGTGATTTTGGTGT+TGG | + | Chr2:71413084-71413103 | None:intergenic | 35.0% |
| AAACGGCGTAATGTATGGTT+TGG | + | Chr2:71413012-71413031 | None:intergenic | 40.0% | |
| AACTTTGTGGATGTGCAGAA+GGG | - | Chr2:71413706-71413725 | MsG0280010556.01.T01:CDS | 40.0% | |
| AGCAGTTTCAAAGCTGTGTT+TGG | - | Chr2:71413887-71413906 | MsG0280010556.01.T01:CDS | 40.0% | |
| AGCTGCATTGAAACTACTTC+TGG | - | Chr2:71413557-71413576 | MsG0280010556.01.T01:CDS | 40.0% | |
| CGAATTAAAGCAGTAGAAGG+CGG | - | Chr2:71413603-71413622 | MsG0280010556.01.T01:CDS | 40.0% | |
| CGCCTTCTACTGCTTTAATT+CGG | + | Chr2:71413605-71413624 | None:intergenic | 40.0% | |
| GAATCAAACGGCGTAATGTA+TGG | + | Chr2:71413017-71413036 | None:intergenic | 40.0% | |
| GAATTGTTGAATCATGGAGC+AGG | - | Chr2:71413735-71413754 | MsG0280010556.01.T01:CDS | 40.0% | |
| TACGCCGTTTGATTCAATCT+TGG | - | Chr2:71413022-71413041 | MsG0280010556.01.T01:CDS | 40.0% | |
| TCTCATGTTGCAAGTGATAG+AGG | - | Chr2:71413792-71413811 | MsG0280010556.01.T01:CDS | 40.0% | |
| TTAATTCGGTTTCTTCCCCA+TGG | + | Chr2:71413591-71413610 | None:intergenic | 40.0% | |
| !!! | ACTTCTGGAGCTTTTACCAT+GGG | - | Chr2:71413572-71413591 | MsG0280010556.01.T01:CDS | 40.0% |
| !!! | TACTTCTGGAGCTTTTACCA+TGG | - | Chr2:71413571-71413590 | MsG0280010556.01.T01:CDS | 40.0% |
| CAACTTTGTGGATGTGCAGA+AGG | - | Chr2:71413705-71413724 | MsG0280010556.01.T01:CDS | 45.0% | |
| CAAGACAAAAGAGAGGGCTA+AGG | - | Chr2:71413932-71413951 | MsG0280010556.01.T01:CDS | 45.0% | |
| CTTGGAAGCTACCAATCTAG+AGG | - | Chr2:71413405-71413424 | MsG0280010556.01.T01:CDS | 45.0% | |
| GTTGAATCATGGAGCAGGAT+TGG | - | Chr2:71413740-71413759 | MsG0280010556.01.T01:CDS | 45.0% | |
| TCTGTCGTAGGTAATTCCTG+TGG | + | Chr2:71412896-71412915 | None:intergenic | 45.0% | |
| ! | ATTCCTGTGGAAAGTGTGAC+AGG | + | Chr2:71412883-71412902 | None:intergenic | 45.0% |
| !!! | CTTCTGGAGCTTTTACCATG+GGG | - | Chr2:71413573-71413592 | MsG0280010556.01.T01:CDS | 45.0% |
| GATCCTGTCACACTTTCCAC+AGG | - | Chr2:71412877-71412896 | MsG0280010556.01.T01:CDS | 50.0% | |
| TAAAGCAGTAGAAGGCGGCG+CGG | - | Chr2:71413608-71413627 | MsG0280010556.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 71412871 | 71414031 | 71412871 | ID=MsG0280010556.01;Name=MsG0280010556.01 |
| Chr2 | mRNA | 71412871 | 71414031 | 71412871 | ID=MsG0280010556.01.T01;Parent=MsG0280010556.01;Name=MsG0280010556.01.T01;_AED=0.18;_eAED=0.18;_QI=0|-1|0|1|-1|1|1|0|386 |
| Chr2 | exon | 71412871 | 71414031 | 71412871 | ID=MsG0280010556.01.T01:exon:27151;Parent=MsG0280010556.01.T01 |
| Chr2 | CDS | 71412871 | 71414031 | 71412871 | ID=MsG0280010556.01.T01:cds;Parent=MsG0280010556.01.T01 |
| Gene Sequence |
| Protein sequence |
