AlfalfaGEDB | MsG0480022398.01

M. sativa cultivar ZhongmuNo.1 / MsG0480022398.01

KEGG: K06027
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480022398.01.T01	KAF5184960.1	43.21	162	38	3	17	124	156	317	7.75E-28	118

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480022398.01.T01	Q9M0Y8	40.606	165	41	3	17	124	191	355	4.79E-25	102

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480022398.01.T01	A0A7J6VLG4	43.210	162	38	3	17	124	156	317	3.70e-28	118

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047785.01	MsG0480022398.01	0.811269	7.617562e-51	4.694235e-48
MsG0080048374.01	MsG0480022398.01	0.869744	2.460414e-66	9.333086e-63
MsG0180001832.01	MsG0480022398.01	0.819900	9.108548e-53	7.100348e-50
MsG0180003303.01	MsG0480022398.01	0.816114	6.533141e-52	4.588550e-49
MsG0180003411.01	MsG0480022398.01	0.875811	2.294985e-68	1.086827e-64
MsG0180003928.01	MsG0480022398.01	0.808002	3.835653e-50	2.168107e-47
MsG0180003937.01	MsG0480022398.01	0.819707	1.008058e-52	7.815924e-50
MsG0180004242.01	MsG0480022398.01	0.837949	3.842003e-57	5.070064e-54
MsG0180004598.01	MsG0480022398.01	0.812214	4.745571e-51	2.999222e-48
MsG0180004989.01	MsG0480022398.01	0.817527	3.148223e-52	2.298246e-49
MsG0180005026.01	MsG0480022398.01	0.832194	1.086522e-55	1.205613e-52
MsG0180005985.01	MsG0480022398.01	0.839973	1.149961e-57	1.614754e-54
MsG0280006304.01	MsG0480022398.01	0.881114	3.141689e-70	1.817306e-66
MsG0280010556.01	MsG0480022398.01	0.821608	3.688891e-53	3.015288e-50
MsG0280010735.01	MsG0480022398.01	0.834239	3.362240e-56	3.966259e-53
MsG0280010823.01	MsG0480022398.01	0.815653	8.278596e-52	5.741750e-49
MsG0280010866.01	MsG0480022398.01	0.837545	4.879292e-57	6.358975e-54
MsG0280011055.01	MsG0480022398.01	0.812347	4.438114e-51	2.815059e-48
MsG0280011056.01	MsG0480022398.01	0.801711	7.914884e-49	3.805933e-46
MsG0280011075.01	MsG0480022398.01	0.839802	1.274408e-57	1.779737e-54
MsG0280011085.01	MsG0480022398.01	0.813735	2.201894e-51	1.449576e-48
MsG0280011336.01	MsG0480022398.01	0.810171	1.316212e-50	7.878363e-48
MsG0380013069.01	MsG0480022398.01	0.828808	7.315944e-55	7.350093e-52
MsG0480019395.01	MsG0480022398.01	0.873282	1.658789e-67	7.158393e-64
MsG0480020371.01	MsG0480022398.01	0.821136	4.740685e-53	3.824658e-50
MsG0480021216.01	MsG0480022398.01	0.842332	2.758048e-58	4.168040e-55
MsG0480021914.01	MsG0480022398.01	0.848570	5.632858e-60	1.038133e-56
MsG0480022317.01	MsG0480022398.01	0.842208	2.975477e-58	4.478683e-55
MsG0480022398.01	MsG0480022709.01	0.802457	5.560542e-49	2.725135e-46
MsG0480022398.01	MsG0480022719.01	0.830961	2.186842e-55	2.339750e-52
MsG0480022398.01	MsG0480023697.01	0.836651	8.259143e-57	1.047362e-53
MsG0480022398.01	MsG0580024770.01	0.851167	1.058285e-60	2.123202e-57
MsG0480022398.01	MsG0580025013.01	0.802585	5.231596e-49	2.572296e-46
MsG0480022398.01	MsG0580025128.01	0.857382	1.696107e-62	4.178179e-59
MsG0480022398.01	MsG0580025730.01	0.803690	3.091176e-49	1.563463e-46
MsG0480022398.01	MsG0580028472.01	0.852565	4.245864e-61	8.907849e-58
MsG0480022398.01	MsG0580029214.01	0.861831	7.779323e-64	2.230290e-60
MsG0480022398.01	MsG0580030100.01	0.801185	1.014616e-48	4.814567e-46
MsG0480022398.01	MsG0680035602.01	0.816172	6.341282e-52	4.460844e-49
MsG0480022398.01	MsG0680035737.01	0.810555	1.087497e-50	6.575652e-48
MsG0480022398.01	MsG0780035936.01	0.811185	7.945480e-51	4.885505e-48
MsG0480022398.01	MsG0780036843.01	0.803070	4.154298e-49	2.067872e-46
MsG0480022398.01	MsG0780037301.01	0.839146	1.886615e-57	2.581949e-54
MsG0480022398.01	MsG0780038888.01	0.812637	3.835613e-51	2.451604e-48
MsG0480022398.01	MsG0780039497.01	0.860967	1.427140e-63	3.972554e-60
MsG0480022398.01	MsG0780039530.01	0.857821	1.256795e-62	3.141942e-59
MsG0480022398.01	MsG0780040027.01	0.827847	1.247555e-54	1.218823e-51
MsG0480022398.01	MsG0780040049.01	0.855365	6.624276e-62	1.525820e-58
MsG0480022398.01	MsG0780040136.01	0.814128	1.803704e-51	1.200120e-48
MsG0480022398.01	MsG0780040687.01	0.823211	1.565061e-53	1.338942e-50
MsG0480022398.01	MsG0780040761.01	0.833738	4.488617e-56	5.215760e-53
MsG0480022398.01	MsG0780041310.01	0.808911	2.453589e-50	1.420377e-47
MsG0480022398.01	MsG0780041371.01	0.805632	1.215453e-49	6.462640e-47
MsG0480022398.01	MsG0780041548.01	0.823575	1.286397e-53	1.111925e-50
MsG0480022398.01	MsG0780041598.01	0.882726	8.178444e-71	5.037812e-67
MsG0480022398.01	MsG0880042783.01	0.820760	5.783943e-53	4.617685e-50
MsG0480022398.01	MsG0880042838.01	0.842385	2.670439e-58	4.042607e-55
MsG0480022398.01	MsG0880045165.01	0.805748	1.149380e-49	6.129801e-47
MsG0480022398.01	MsG0880045841.01	0.820454	6.800086e-53	5.383191e-50
MsG0480022398.01	MsG0880046100.01	0.820272	7.487276e-53	5.897077e-50
MsG0480022398.01	MsG0880046893.01	0.822681	2.079791e-53	1.752906e-50
MsG0480022398.01	MsG0880047293.01	0.827310	1.679384e-54	1.615303e-51
MsG0380015495.01	MsG0480022398.01	0.867942	9.430910e-66	3.351415e-62
MsG0380016589.01	MsG0480022398.01	0.831711	1.429470e-55	1.564045e-52
MsG0380016927.01	MsG0480022398.01	0.871375	7.167502e-67	2.884770e-63
MsG0380017410.01	MsG0480022398.01	0.822544	2.238448e-53	1.879346e-50
MsG0380017430.01	MsG0480022398.01	0.814511	1.484423e-51	9.980462e-49
MsG0380017643.01	MsG0480022398.01	0.808489	3.019689e-50	1.728927e-47
MsG0380017881.01	MsG0480022398.01	0.829902	3.970278e-55	4.119072e-52
MsG0380017946.01	MsG0480022398.01	0.805139	1.541708e-49	8.094229e-47
MsG0480018125.01	MsG0480022398.01	0.818692	1.716338e-52	1.293747e-49
MsG0480018256.01	MsG0480022398.01	0.850261	1.904194e-60	3.708375e-57
MsG0280007790.01	MsG0480022398.01	0.812352	4.426360e-51	2.807967e-48
MsG0280007829.01	MsG0480022398.01	0.814318	1.637436e-51	1.095182e-48
MsG0280007830.01	MsG0480022398.01	0.829269	5.656806e-55	5.761820e-52
MsG0280008134.01	MsG0480022398.01	0.822194	2.699307e-53	2.243474e-50
MsG0280008574.01	MsG0480022398.01	0.807269	5.489072e-50	3.043990e-47
MsG0280009386.01	MsG0480022398.01	0.858170	9.899705e-63	2.503997e-59
MsG0280009932.01	MsG0480022398.01	0.806785	6.948900e-50	3.805344e-47
MsG0280010427.01	MsG0480022398.01	0.807052	6.101488e-50	3.364493e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480022398.01.T01	MTR_4g088885	43.636	165	36	3	17	124	201	365	3.39e-28	108

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480022398.01.T01	AT4G04910	40.606	165	41	3	17	124	191	355	4.89e-26	102

Find 32 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTCTTATGGCACGTCAAAT+TGG	0.301098	4:+72036392	MsG0480022398.01.T01:CDS
GTGAAGGGCATGCTGCTTTA+TGG	0.303357	4:+72036350	MsG0480022398.01.T01:CDS
AGAATTTAACCTTGAGTCTC+TGG	0.323497	4:+72036146	MsG0480022398.01.T01:CDS
AACCTTGAGTCTCTGGGTAT+TGG	0.360417	4:+72036153	MsG0480022398.01.T01:CDS
TTAATGTTACTGATTTGATT+TGG	0.361071	4:+72035737	MsG0480022398.01.T01:CDS
ATAAGAGTCTTTCCAGTTCC+AGG	0.386392	4:-72036377	None:intergenic
GTCTCTGGGTATTGGTGGCT+TGG	0.392092	4:+72036161	MsG0480022398.01.T01:CDS
TAATGTTACTGATTTGATTT+GGG	0.394183	4:+72035738	MsG0480022398.01.T01:CDS
TGGAACTGGAAAGACTCTTA+TGG	0.400254	4:+72036379	MsG0480022398.01.T01:CDS
CTTTATGGTCCTCCTGGAAC+TGG	0.401692	4:+72036365	MsG0480022398.01.T01:CDS
ATTAAGATTTAACACTTTCA+CGG	0.437214	4:-72038549	None:intergenic
CTTGAGTCTCTGGGTATTGG+TGG	0.438277	4:+72036156	MsG0480022398.01.T01:CDS
ATCAGTAACATTAAGCATCA+AGG	0.448186	4:-72035728	None:intergenic
ACCATCTCGAGTGGAGCCTC+TGG	0.460501	4:-72038482	None:intergenic
CACGGACCTTAGTAAGAAGC+TGG	0.469945	4:-72038531	None:intergenic
ATGCTGCTTTATGGTCCTCC+TGG	0.474173	4:+72036359	MsG0480022398.01.T01:CDS
TGTGAACCAGCTTCTTACTA+AGG	0.482667	4:+72038525	MsG0480022398.01.T01:CDS
GGCTCCACTCGAGATGGTAC+GGG	0.486673	4:+72038487	MsG0480022398.01.T01:CDS
AGGCTCCACTCGAGATGGTA+CGG	0.508608	4:+72038486	MsG0480022398.01.T01:CDS
GAATTTAACCTTGAGTCTCT+GGG	0.527338	4:+72036147	MsG0480022398.01.T01:CDS
TTTGAATGGCAAGGAACCAA+AGG	0.549580	4:+72036420	MsG0480022398.01.T01:CDS
TACTTAGATGTCACATGGGG+AGG	0.550361	4:-72036231	None:intergenic
TCAGTAACATTAAGCATCAA+GGG	0.559340	4:-72035727	None:intergenic
TCATGTCTTGTGCAGTCCAG+AGG	0.562337	4:+72038466	MsG0480022398.01.T01:intron
ACTTAGATGTCACATGGGGA+GGG	0.572938	4:-72036230	None:intergenic
TTAGGGATCAAGCATGTGAA+GGG	0.574013	4:+72036335	MsG0480022398.01.T01:CDS
TCCAGAGGCTCCACTCGAGA+TGG	0.583964	4:+72038481	MsG0480022398.01.T01:CDS
ATTAGGGATCAAGCATGTGA+AGG	0.605309	4:+72036334	MsG0480022398.01.T01:CDS
AAACCCCGTACCATCTCGAG+TGG	0.633566	4:-72038491	None:intergenic
CACCAATACCCAGAGACTCA+AGG	0.637910	4:-72036155	None:intergenic
GCTCCACTCGAGATGGTACG+GGG	0.691409	4:+72038488	MsG0480022398.01.T01:CDS
AGAGTCTTTCCAGTTCCAGG+AGG	0.727261	4:-72036374	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATAATTTTTATTCCAAATT+TGG	+	Chr4:72036654-72036673	MsG0480022398.01.T01:intron	10.0%
!!!	ACTGTTTTATAATATATAGT+GGG	+	Chr4:72037369-72037388	MsG0480022398.01.T01:intron	15.0%
!!!	ATTTGGAATAAAAATTATAG+TGG	-	Chr4:72036653-72036672	None:intergenic	15.0%
!!!	TACTGTTTTATAATATATAG+TGG	+	Chr4:72037368-72037387	MsG0480022398.01.T01:intron	15.0%
!!!	TGCTATAATAATTTTAAAAG+TGG	+	Chr4:72036947-72036966	MsG0480022398.01.T01:intron	15.0%
!!	ATATTTATCGAGAGAAATTA+TGG	-	Chr4:72037575-72037594	None:intergenic	20.0%
!!	TCAAATTGGAAAAATTTGAA+TGG	+	Chr4:72036406-72036425	MsG0480022398.01.T01:CDS	20.0%
!!	TCAAGTTAGTATATTATAGA+AGG	-	Chr4:72036874-72036893	None:intergenic	20.0%
!!	TCATAAAACAGTAGATTAAA+TGG	-	Chr4:72036276-72036295	None:intergenic	20.0%
!!	TGGGAAATAATTATCAAAAT+AGG	-	Chr4:72038225-72038244	None:intergenic	20.0%
!!!	AAAATTTAAGCTTTTATCAG+TGG	-	Chr4:72038363-72038382	None:intergenic	20.0%
!!!	ACTGATAAAAGCTTAAATTT+TGG	+	Chr4:72038362-72038381	MsG0480022398.01.T01:intron	20.0%
!!!	ATATCTGGTTATTATCTTTT+TGG	+	Chr4:72037003-72037022	MsG0480022398.01.T01:intron	20.0%
!!!	ATTATCCTTGCAAAATTTTA+CGG	+	Chr4:72036056-72036075	MsG0480022398.01.T01:intron	20.0%
!!!	GAAATCATAATTTTTTCACT+TGG	+	Chr4:72036900-72036919	MsG0480022398.01.T01:intron	20.0%
!!!	TAATGTTACTGATTTGATTT+GGG	+	Chr4:72035738-72035757	MsG0480022398.01.T01:CDS	20.0%
!!!	TTAATGTTACTGATTTGATT+TGG	+	Chr4:72035737-72035756	MsG0480022398.01.T01:CDS	20.0%
!	AAACTACAAAAGAATCAAAC+AGG	+	Chr4:72037436-72037455	MsG0480022398.01.T01:intron	25.0%
!	CATAAGTTTCAATTATACGA+GGG	-	Chr4:72037986-72038005	None:intergenic	25.0%
!	TATTAACCACTTAAACTGAT+AGG	-	Chr4:72036491-72036510	None:intergenic	25.0%
!!	ACAAATTTGCTCAAAATTCA+GGG	-	Chr4:72037081-72037100	None:intergenic	25.0%
!!	CTTTTGTAGTTTCTCTTTAT+GGG	-	Chr4:72037428-72037447	None:intergenic	25.0%
!!	TCATTTTCTTTCTTTTGTGT+GGG	-	Chr4:72038244-72038263	None:intergenic	25.0%
!!	TCTTTTGTAGTTTCTCTTTA+TGG	-	Chr4:72037429-72037448	None:intergenic	25.0%
!!	TGAATTTTGAGCAAATTTGT+GGG	+	Chr4:72037081-72037100	MsG0480022398.01.T01:intron	25.0%
!!	TGTTCATACAGAATTTTGTT+TGG	+	Chr4:72035789-72035808	MsG0480022398.01.T01:intron	25.0%
!!	TTATCCTTGCAAAATTTTAC+GGG	+	Chr4:72036057-72036076	MsG0480022398.01.T01:intron	25.0%
!!	TTCATTTTCTTTCTTTTGTG+TGG	-	Chr4:72038245-72038264	None:intergenic	25.0%
!!	TTCTTCAATGTTTTACGATT+TGG	+	Chr4:72036612-72036631	MsG0480022398.01.T01:intron	25.0%
!!!	ATTTTTTTCTCTGTTTTCCA+GGG	+	Chr4:72037222-72037241	MsG0480022398.01.T01:intron	25.0%
!!!	TATTTTTTTCTCTGTTTTCC+AGG	+	Chr4:72037221-72037240	MsG0480022398.01.T01:intron	25.0%
	AAACTTATGGAGTGATTATC+TGG	+	Chr4:72037997-72038016	MsG0480022398.01.T01:intron	30.0%
	AACATGGATGAAAATATGCT+TGG	+	Chr4:72037960-72037979	MsG0480022398.01.T01:intron	30.0%
	AACTTATGGAGTGATTATCT+GGG	+	Chr4:72037998-72038017	MsG0480022398.01.T01:intron	30.0%
	AAGTAATAGATCTGATACTG+TGG	+	Chr4:72036249-72036268	MsG0480022398.01.T01:intron	30.0%
	AGTAGACTCATAATCAATGT+AGG	-	Chr4:72038279-72038298	None:intergenic	30.0%
	ATACGTACTTTGCTTTCTAT+AGG	+	Chr4:72036977-72036996	MsG0480022398.01.T01:intron	30.0%
	ATAGTTAGTAGAGTAGCATT+AGG	-	Chr4:72036036-72036055	None:intergenic	30.0%
	ATCAGTAACATTAAGCATCA+AGG	-	Chr4:72035731-72035750	None:intergenic	30.0%
	ATCTAAGTAATCACTAGCAT+TGG	+	Chr4:72038152-72038171	MsG0480022398.01.T01:intron	30.0%
	ATTATAGAAGGCAAAAAGCA+TGG	-	Chr4:72036862-72036881	None:intergenic	30.0%
	CAATGATCAAACTAAACTAC+TGG	-	Chr4:72035848-72035867	None:intergenic	30.0%
	CCATAAGTTTCAATTATACG+AGG	-	Chr4:72037987-72038006	None:intergenic	30.0%
	CCTCGTATAATTGAAACTTA+TGG	+	Chr4:72037984-72038003	MsG0480022398.01.T01:intron	30.0%
	CTATTACTTAGATGTCACAT+GGG	-	Chr4:72036238-72036257	None:intergenic	30.0%
	GCTTTGGTACAAATATAACA+TGG	+	Chr4:72037944-72037963	MsG0480022398.01.T01:intron	30.0%
	GTGTGTGTGTGTATAAAATA+GGG	+	Chr4:72037395-72037414	MsG0480022398.01.T01:intron	30.0%
	TACCTGTACTAGATTGTAAA+TGG	+	Chr4:72037055-72037074	MsG0480022398.01.T01:intron	30.0%
	TATTACACAAGTATAACGAG+TGG	-	Chr4:72036454-72036473	None:intergenic	30.0%
	TATTACTTAGATGTCACATG+GGG	-	Chr4:72036237-72036256	None:intergenic	30.0%
	TCAGTAACATTAAGCATCAA+GGG	-	Chr4:72035730-72035749	None:intergenic	30.0%
	TCTATTACTTAGATGTCACA+TGG	-	Chr4:72036239-72036258	None:intergenic	30.0%
	TGAATGTATATTCATCACCT+AGG	-	Chr4:72037163-72037182	None:intergenic	30.0%
	TGGATTAACTTCTGGTATAT+AGG	-	Chr4:72038425-72038444	None:intergenic	30.0%
	TGTGTGTGTGTATAAAATAG+GGG	+	Chr4:72037396-72037415	MsG0480022398.01.T01:intron	30.0%
	TGTGTGTGTGTGTATAAAAT+AGG	+	Chr4:72037394-72037413	MsG0480022398.01.T01:intron	30.0%
	TTATATTTGTACCAAAGCAG+AGG	-	Chr4:72037942-72037961	None:intergenic	30.0%
	TTGAAGAAAAACGTATTCCA+AGG	-	Chr4:72036600-72036619	None:intergenic	30.0%
	TTGGAAAAATTTGAATGGCA+AGG	+	Chr4:72036411-72036430	MsG0480022398.01.T01:CDS	30.0%
!	AATTTTCTGATACTACGCAT+AGG	+	Chr4:72038197-72038216	MsG0480022398.01.T01:intron	30.0%
!	CACAAATTTGCTCAAAATTC+AGG	-	Chr4:72037082-72037101	None:intergenic	30.0%
!	CTGAATTTTGAGCAAATTTG+TGG	+	Chr4:72037080-72037099	MsG0480022398.01.T01:intron	30.0%
!	TAAACCCGTAAAATTTTGCA+AGG	-	Chr4:72036064-72036083	None:intergenic	30.0%
!	TCTGGTTATTATCTTTTTGG+TGG	+	Chr4:72037006-72037025	MsG0480022398.01.T01:intron	30.0%
!	TTAGATTTGGTCAAAGAGAT+AGG	-	Chr4:72037729-72037748	None:intergenic	30.0%
!!	GATTTGATTTGGGTAATGTT+TGG	+	Chr4:72035748-72035767	MsG0480022398.01.T01:intron	30.0%
!!!	TTTTTTTCTCTGTTTTCCAG+GGG	+	Chr4:72037223-72037242	MsG0480022398.01.T01:intron	30.0%
	AACGTGATCACAATTCAATG+TGG	+	Chr4:72038105-72038124	MsG0480022398.01.T01:intron	35.0%
	AATTGCTTGATCTGTAGGTA+CGG	+	Chr4:72037280-72037299	MsG0480022398.01.T01:intron	35.0%
	ACGTGATCACAATTCAATGT+GGG	+	Chr4:72038106-72038125	MsG0480022398.01.T01:intron	35.0%
	AGAATTTAACCTTGAGTCTC+TGG	+	Chr4:72036146-72036165	MsG0480022398.01.T01:CDS	35.0%
	AGCATTTGACGTTTCAGATT+AGG	+	Chr4:72036317-72036336	MsG0480022398.01.T01:intron	35.0%
	ATCGAGAGAAATTATGGTTC+CGG	-	Chr4:72037569-72037588	None:intergenic	35.0%
	ATTATCTGGGAAGGAAAAAG+AGG	+	Chr4:72038011-72038030	MsG0480022398.01.T01:intron	35.0%
	CAATGATCAATTACCTCACA+TGG	-	Chr4:72035882-72035901	None:intergenic	35.0%
	CAGCAAACACAATAGAGAAT+TGG	-	Chr4:72037334-72037353	None:intergenic	35.0%
	CGATCATGTAATGCCAAATT+TGG	-	Chr4:72036670-72036689	None:intergenic	35.0%
	GAATTTAACCTTGAGTCTCT+GGG	+	Chr4:72036147-72036166	MsG0480022398.01.T01:CDS	35.0%
	GAGAAACATATAGCACAGTT+TGG	-	Chr4:72038445-72038464	None:intergenic	35.0%
	GATGAAATTGCTTGATCTGT+AGG	+	Chr4:72037275-72037294	MsG0480022398.01.T01:intron	35.0%
	GCATTTGACGTTTCAGATTA+GGG	+	Chr4:72036318-72036337	MsG0480022398.01.T01:intron	35.0%
	GTGAAACTGAAAGAATGTGA+GGG	+	Chr4:72037103-72037122	MsG0480022398.01.T01:intron	35.0%
	GTGTTAACTATTACCTCACA+TGG	-	Chr4:72035916-72035935	None:intergenic	35.0%
	TGACAGATTATTACCACTTG+AGG	+	Chr4:72037860-72037879	MsG0480022398.01.T01:intron	35.0%
	TGATATATCACCTTCTCACT+TGG	+	Chr4:72036293-72036312	MsG0480022398.01.T01:intron	35.0%
	TGTATTAGAAGCTTGCAATG+TGG	-	Chr4:72037680-72037699	None:intergenic	35.0%
	TGTTACATGTATTCCATGTG+AGG	+	Chr4:72035900-72035919	MsG0480022398.01.T01:intron	35.0%
!	GTATGAACAGTCTAAGATCA+AGG	-	Chr4:72035778-72035797	None:intergenic	35.0%
!	TGTTACTTGTATTCCATGTG+AGG	+	Chr4:72035866-72035885	MsG0480022398.01.T01:intron	35.0%
!!	GCTTTCTATAGGTTGATATC+TGG	+	Chr4:72036988-72037007	MsG0480022398.01.T01:intron	35.0%
	ACCTACTGCTTAATCTTAGG+AGG	+	Chr4:72037487-72037506	MsG0480022398.01.T01:intron	40.0%
	ACGTATTCCAAGGCAAATAC+TGG	-	Chr4:72036590-72036609	None:intergenic	40.0%
	ACTCTTATGGCACGTCAAAT+TGG	+	Chr4:72036392-72036411	MsG0480022398.01.T01:CDS	40.0%
	AGCAGTCTTCTAATCTTCGT+CGG	+	Chr4:72037623-72037642	MsG0480022398.01.T01:intron	40.0%
	ATAAGAGTCTTTCCAGTTCC+AGG	-	Chr4:72036380-72036399	None:intergenic	40.0%
	ATCACGTTCCCTATGTTCAT+GGG	-	Chr4:72038093-72038112	None:intergenic	40.0%
	ATGATAGAGGTTGTTGGATG+TGG	-	Chr4:72037816-72037835	None:intergenic	40.0%
	ATTAGGGATCAAGCATGTGA+AGG	+	Chr4:72036334-72036353	MsG0480022398.01.T01:CDS	40.0%
	ATTGCTTGATCTGTAGGTAC+GGG	+	Chr4:72037281-72037300	MsG0480022398.01.T01:intron	40.0%
	ATTGGGATGATAGAGGTTGT+TGG	-	Chr4:72037822-72037841	None:intergenic	40.0%
	CAGGGCATAGTTAACGAAAT+AGG	-	Chr4:72036786-72036805	None:intergenic	40.0%
	CGTGATCACAATTCAATGTG+GGG	+	Chr4:72038107-72038126	MsG0480022398.01.T01:intron	40.0%
	GCACAGTTTGGATTAACTTC+TGG	-	Chr4:72038433-72038452	None:intergenic	40.0%
	GGCCATTTACAATCTAGTAC+AGG	-	Chr4:72037060-72037079	None:intergenic	40.0%
	GGTGAAACTGAAAGAATGTG+AGG	+	Chr4:72037102-72037121	MsG0480022398.01.T01:intron	40.0%
	TAACAAAGTCTTCTCCCAGT+TGG	+	Chr4:72035999-72036018	MsG0480022398.01.T01:intron	40.0%
	TACAACTAACTCCAACTCCA+TGG	+	Chr4:72037696-72037715	MsG0480022398.01.T01:intron	40.0%
	TATGGAGTGATTATCTGGGA+AGG	+	Chr4:72038002-72038021	MsG0480022398.01.T01:intron	40.0%
	TCAAATGCTTCCAAGTGAGA+AGG	-	Chr4:72036306-72036325	None:intergenic	40.0%
	TCCTAAGATTAAGCAGTAGG+TGG	-	Chr4:72037488-72037507	None:intergenic	40.0%
	TCCTCCTAAGATTAAGCAGT+AGG	-	Chr4:72037491-72037510	None:intergenic	40.0%
	TCGAGAGAAATTATGGTTCC+GGG	-	Chr4:72037568-72037587	None:intergenic	40.0%
	TGATAGAGGTTGTTGGATGT+GGG	-	Chr4:72037815-72037834	None:intergenic	40.0%
	TGGAACTGGAAAGACTCTTA+TGG	+	Chr4:72036379-72036398	MsG0480022398.01.T01:CDS	40.0%
	TGTGAACCAGCTTCTTACTA+AGG	+	Chr4:72038525-72038544	MsG0480022398.01.T01:CDS	40.0%
	TTAGGGATCAAGCATGTGAA+GGG	+	Chr4:72036335-72036354	MsG0480022398.01.T01:CDS	40.0%
	TTGTGGAGTTGGAGGAATAA+GGG	-	Chr4:72038061-72038080	None:intergenic	40.0%
	TTTGAATGGCAAGGAACCAA+AGG	+	Chr4:72036420-72036439	MsG0480022398.01.T01:CDS	40.0%
!	GAACAGTCTAAGATCAAGGT+TGG	-	Chr4:72035774-72035793	None:intergenic	40.0%
!	GCTCATGTGAAGATTTTGTG+AGG	-	Chr4:72038037-72038056	None:intergenic	40.0%
!!	AGGTGTTATTGGGATGATAG+AGG	-	Chr4:72037829-72037848	None:intergenic	40.0%
	AACCTTGAGTCTCTGGGTAT+TGG	+	Chr4:72036153-72036172	MsG0480022398.01.T01:CDS	45.0%
	AAGCAGAGGTGACATTTAGC+TGG	-	Chr4:72037928-72037947	None:intergenic	45.0%
	ACGAGTGGTTTCCAAACCTT+TGG	-	Chr4:72036439-72036458	None:intergenic	45.0%
	ACTTAGATGTCACATGGGGA+GGG	-	Chr4:72036233-72036252	None:intergenic	45.0%
	AGAGAAATTATGGTTCCGGG+TGG	-	Chr4:72037565-72037584	None:intergenic	45.0%
	AGAGGTGACATTTAGCTGGA+AGG	-	Chr4:72037924-72037943	None:intergenic	45.0%
	AGCTTGCAATGTGGCTCATT+AGG	-	Chr4:72037671-72037690	None:intergenic	45.0%
	AGGAAGTTTGTCCACCAACT+GGG	-	Chr4:72036016-72036035	None:intergenic	45.0%
	AGGCTACGAGGGTTTAGATT+TGG	-	Chr4:72037742-72037761	None:intergenic	45.0%
	ATGGCAAGGAACCAAAGGTT+TGG	+	Chr4:72036425-72036444	MsG0480022398.01.T01:intron	45.0%
	CCTGTTCAGCATCAGCAAAA+AGG	-	Chr4:72037130-72037149	None:intergenic	45.0%
	CTTGTGGAGTTGGAGGAATA+AGG	-	Chr4:72038062-72038081	None:intergenic	45.0%
	GAAGATTAGAAGACTGCTGG+AGG	-	Chr4:72037621-72037640	None:intergenic	45.0%
	GACGAAGATTAGAAGACTGC+TGG	-	Chr4:72037624-72037643	None:intergenic	45.0%
	GATAGAGGTTGTTGGATGTG+GGG	-	Chr4:72037814-72037833	None:intergenic	45.0%
	GATCACGTTCCCTATGTTCA+TGG	-	Chr4:72038094-72038113	None:intergenic	45.0%
	GCCACCTACTGCTTAATCTT+AGG	+	Chr4:72037484-72037503	MsG0480022398.01.T01:intron	45.0%
	GCTAAATGTCACCTCTGCTT+TGG	+	Chr4:72037928-72037947	MsG0480022398.01.T01:intron	45.0%
	GTGCGAGTTTGGAGAAGATT+TGG	-	Chr4:72037527-72037546	None:intergenic	45.0%
	TAAGCACACATAGAGCCTAG+AGG	+	Chr4:72037779-72037798	MsG0480022398.01.T01:intron	45.0%
	TACTTAGATGTCACATGGGG+AGG	-	Chr4:72036234-72036253	None:intergenic	45.0%
	TAGGAAGTTTGTCCACCAAC+TGG	-	Chr4:72036017-72036036	None:intergenic	45.0%
	TAGTGCACCAGTATTTGCCT+TGG	+	Chr4:72036580-72036599	MsG0480022398.01.T01:intron	45.0%
	TATTCCTCCAACTCCACAAG+TGG	+	Chr4:72038062-72038081	MsG0480022398.01.T01:intron	45.0%
	TGCAAATCACTTTGATCCCC+TGG	-	Chr4:72037242-72037261	None:intergenic	45.0%
	TGCGCACCTATCAGTTTAAG+TGG	+	Chr4:72036482-72036501	MsG0480022398.01.T01:intron	45.0%
	TGGTAGCACCCATGAACATA+GGG	+	Chr4:72038082-72038101	MsG0480022398.01.T01:intron	45.0%
	TTACGTGGAAGAGCTATGGA+AGG	-	Chr4:72037762-72037781	None:intergenic	45.0%
	TTGCTTGATCTGTAGGTACG+GGG	+	Chr4:72037282-72037301	MsG0480022398.01.T01:intron	45.0%
!	CCTTTTTGCTGATGCTGAAC+AGG	+	Chr4:72037127-72037146	MsG0480022398.01.T01:intron	45.0%
!!	CTAGCTGCAGAGGTGTTATT+GGG	-	Chr4:72037839-72037858	None:intergenic	45.0%
!!!	TTAATTTTCATAATAAATAT+AGG	+	Chr4:72036712-72036731	MsG0480022398.01.T01:intron	5.0%
	AACTCCAACTCCATGGCTGA+AGG	+	Chr4:72037703-72037722	MsG0480022398.01.T01:intron	50.0%
	AAGAGATAGGCCTTCAGCCA+TGG	-	Chr4:72037716-72037735	None:intergenic	50.0%
	AAGAGCTATGGAAGGCTACG+AGG	-	Chr4:72037754-72037773	None:intergenic	50.0%
	AATCTGTCAGCTAGCTGCAG+AGG	-	Chr4:72037849-72037868	None:intergenic	50.0%
	AGAGCTATGGAAGGCTACGA+GGG	-	Chr4:72037753-72037772	None:intergenic	50.0%
	AGAGTCTTTCCAGTTCCAGG+AGG	-	Chr4:72036377-72036396	None:intergenic	50.0%
	AGGCTCTATGTGTGCTTACG+TGG	-	Chr4:72037777-72037796	None:intergenic	50.0%
	AGGGTGGCCTCGAATAAACA+CGG	-	Chr4:72037892-72037911	None:intergenic	50.0%
	ATGCCCTGCATGAATCTGCT+TGG	+	Chr4:72036798-72036817	MsG0480022398.01.T01:intron	50.0%
	CAAAGTCTTCTCCCAGTTGG+TGG	+	Chr4:72036002-72036021	MsG0480022398.01.T01:intron	50.0%
	CACCAATACCCAGAGACTCA+AGG	-	Chr4:72036158-72036177	None:intergenic	50.0%
	CACCCAAGCAGATTCATGCA+GGG	-	Chr4:72036804-72036823	None:intergenic	50.0%
	CACGGACCTTAGTAAGAAGC+TGG	-	Chr4:72038534-72038553	None:intergenic	50.0%
	CTGATGCTGAACAGGATCAG+AGG	+	Chr4:72037135-72037154	MsG0480022398.01.T01:intron	50.0%
	CTGCATGAATCTGCTTGGGT+GGG	+	Chr4:72036803-72036822	MsG0480022398.01.T01:intron	50.0%
	CTTTATGGTCCTCCTGGAAC+TGG	+	Chr4:72036365-72036384	MsG0480022398.01.T01:CDS	50.0%
	GAACAGGATCAGAGGAACCT+AGG	+	Chr4:72037143-72037162	MsG0480022398.01.T01:intron	50.0%
	GCACCATCCGTGTTTATTCG+AGG	+	Chr4:72037882-72037901	MsG0480022398.01.T01:intron	50.0%
	GGCTCATTAGGTAGTGTCCA+GGG	-	Chr4:72037659-72037678	None:intergenic	50.0%
	GTGCTTACGTGGAAGAGCTA+TGG	-	Chr4:72037766-72037785	None:intergenic	50.0%
	GTGGTAGCACCCATGAACAT+AGG	+	Chr4:72038081-72038100	MsG0480022398.01.T01:intron	50.0%
	TAGGTGGCTGCTGATGTGTT+AGG	-	Chr4:72037472-72037491	None:intergenic	50.0%
	TCATGTCTTGTGCAGTCCAG+AGG	+	Chr4:72038466-72038485	MsG0480022398.01.T01:intron	50.0%
	TCCAAACTCGCACCCTAAAC+AGG	+	Chr4:72037534-72037553	MsG0480022398.01.T01:intron	50.0%
	TGCCCTGCATGAATCTGCTT+GGG	+	Chr4:72036799-72036818	MsG0480022398.01.T01:intron	50.0%
	TGGCCTCGAATAAACACGGA+TGG	-	Chr4:72037888-72037907	None:intergenic	50.0%
	TGGCTCATTAGGTAGTGTCC+AGG	-	Chr4:72037660-72037679	None:intergenic	50.0%
	TTGATCTGTAGGTACGGGGT+CGG	+	Chr4:72037286-72037305	MsG0480022398.01.T01:intron	50.0%
!	TTCATGGGTGCTACCACTTG+TGG	-	Chr4:72038078-72038097	None:intergenic	50.0%
!!	ATGCTGCTTTATGGTCCTCC+TGG	+	Chr4:72036359-72036378	MsG0480022398.01.T01:CDS	50.0%
!!	CATTTAGCTGGAAGGCACCT+AGG	-	Chr4:72037916-72037935	None:intergenic	50.0%
!!	CTTGAGTCTCTGGGTATTGG+TGG	+	Chr4:72036156-72036175	MsG0480022398.01.T01:CDS	50.0%
!!	GCTAGCTGCAGAGGTGTTAT+TGG	-	Chr4:72037840-72037859	None:intergenic	50.0%
!!	GTGAAGGGCATGCTGCTTTA+TGG	+	Chr4:72036350-72036369	MsG0480022398.01.T01:CDS	50.0%
	AAACCCCGTACCATCTCGAG+TGG	-	Chr4:72038494-72038513	None:intergenic	55.0%
	AACACGGATGGTGCCTCAAG+TGG	-	Chr4:72037876-72037895	None:intergenic	55.0%
	AGGCTCCACTCGAGATGGTA+CGG	+	Chr4:72038486-72038505	MsG0480022398.01.T01:CDS	55.0%
	CCACCCAAGCAGATTCATGC+AGG	-	Chr4:72036805-72036824	None:intergenic	55.0%
	CCTAAACAGGCAAGACCACC+CGG	+	Chr4:72037547-72037566	MsG0480022398.01.T01:intron	55.0%
	CCTGCATGAATCTGCTTGGG+TGG	+	Chr4:72036802-72036821	MsG0480022398.01.T01:intron	55.0%
	GAAGACTGCTGGAGGCTGAT+TGG	-	Chr4:72037613-72037632	None:intergenic	55.0%
	GCTACCACTTGTGGAGTTGG+AGG	-	Chr4:72038069-72038088	None:intergenic	55.0%
	GGGTGGGTGTAACTTTCTGC+TGG	+	Chr4:72036819-72036838	MsG0480022398.01.T01:intron	55.0%
	TAGGCCTTCAGCCATGGAGT+TGG	-	Chr4:72037710-72037729	None:intergenic	55.0%
	TCGTCGGCAAAGTTCTTCCC+TGG	+	Chr4:72037639-72037658	MsG0480022398.01.T01:intron	55.0%
	TGATCTGTAGGTACGGGGTC+GGG	+	Chr4:72037287-72037306	MsG0480022398.01.T01:intron	55.0%
!	CGGGTGGTCTTGCCTGTTTA+GGG	-	Chr4:72037549-72037568	None:intergenic	55.0%
!	GCCTGTTTAGGGTGCGAGTT+TGG	-	Chr4:72037538-72037557	None:intergenic	55.0%
!	GGTGCTACCACTTGTGGAGT+TGG	-	Chr4:72038072-72038091	None:intergenic	55.0%
!!	GTCTCTGGGTATTGGTGGCT+TGG	+	Chr4:72036161-72036180	MsG0480022398.01.T01:CDS	55.0%
!!	GTGGGGTTTGCTAAGCCTCT+AGG	-	Chr4:72037797-72037816	None:intergenic	55.0%
	ACCATCTCGAGTGGAGCCTC+TGG	-	Chr4:72038485-72038504	None:intergenic	60.0%
	GCTCCACTCGAGATGGTACG+GGG	+	Chr4:72038488-72038507	MsG0480022398.01.T01:CDS	60.0%
	GGCTCCACTCGAGATGGTAC+GGG	+	Chr4:72038487-72038506	MsG0480022398.01.T01:CDS	60.0%
	TATTCGAGGCCACCCTGCCT+AGG	+	Chr4:72037896-72037915	MsG0480022398.01.T01:intron	60.0%
	TCCAGAGGCTCCACTCGAGA+TGG	+	Chr4:72038481-72038500	MsG0480022398.01.T01:CDS	60.0%
!	CCGGGTGGTCTTGCCTGTTT+AGG	-	Chr4:72037550-72037569	None:intergenic	60.0%
!!	AGCTGGAAGGCACCTAGGCA+GGG	-	Chr4:72037911-72037930	None:intergenic	60.0%
!!	TAGCTGGAAGGCACCTAGGC+AGG	-	Chr4:72037912-72037931	None:intergenic	60.0%
!!	TGGAAGGCACCTAGGCAGGG+TGG	-	Chr4:72037908-72037927	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	72035706	72038570	72035706	ID=MsG0480022398.01;Name=MsG0480022398.01
Chr4	mRNA	72035706	72038570	72035706	ID=MsG0480022398.01.T01;Parent=MsG0480022398.01;Name=MsG0480022398.01.T01;_AED=0.50;_eAED=0.57;_QI=0\|0\|0.25\|1\|0.66\|0.75\|4\|0\|130
Chr4	exon	72035706	72035759	72035706	ID=MsG0480022398.01.T01:exon:4939;Parent=MsG0480022398.01.T01
Chr4	exon	72036099	72036239	72036099	ID=MsG0480022398.01.T01:exon:4940;Parent=MsG0480022398.01.T01
Chr4	exon	72036334	72036441	72036334	ID=MsG0480022398.01.T01:exon:4941;Parent=MsG0480022398.01.T01
Chr4	exon	72038481	72038570	72038481	ID=MsG0480022398.01.T01:exon:4942;Parent=MsG0480022398.01.T01
Chr4	CDS	72035706	72035759	72035706	ID=MsG0480022398.01.T01:cds;Parent=MsG0480022398.01.T01
Chr4	CDS	72036099	72036239	72036099	ID=MsG0480022398.01.T01:cds;Parent=MsG0480022398.01.T01
Chr4	CDS	72036334	72036441	72036334	ID=MsG0480022398.01.T01:cds;Parent=MsG0480022398.01.T01
Chr4	CDS	72038481	72038570	72038481	ID=MsG0480022398.01.T01:cds;Parent=MsG0480022398.01.T01

Gene Sequence

>MsG0480022398.01.T01

ATGCTTACACAACTCAACTATCCCTTGATGCTTAATGTTACTGATTTGATTTGGATTATCAATCAGCGCGATTCTACTACTAGCAACATTTTTAAGCAGAAAGAATTTAACCTTGAGTCTCTGGGTATTGGTGGCTTGGTGCAGAGTTTGCAGATATTTCGAAGAGCTTTTGCATCTCGTGTTTTCCCTCCCCATATTAGGGATCAAGCATGTGAAGGGCATGCTGCTTTATGGTCCTCCTGGAACTGGAAAGACTCTTATGGCACGTCAAATTGGAAAAATTTGAATGGCAAGGAACCAAAGTCCAGAGGCTCCACTCGAGATGGTACGGGGTTTCATGATAGCATTGTGAACCAGCTTCTTACTAAGGTCCGTGAAAGTGTTAAATCTTAA

Protein sequence

>MsG0480022398.01.T01

MLTQLNYPLMLNVTDLIWIINQRDSTTSNIFKQKEFNLESLGIGGLVQSLQIFRRAFASRVFPPHIRDQACEGHAALWSSWNWKDSYGTSNWKNLNGKEPKSRGSTRDGTGFHDSIVNQLLTKVRESVKS*