Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010814.01.T01 | KEH39249.1 | 66.791 | 536 | 95 | 7 | 3 | 462 | 773 | 1301 | 0 | 607 |
MsG0280010814.01.T01 | KEH39249.1 | 50 | 180 | 86 | 3 | 3 | 180 | 731 | 908 | 4.72E-27 | 127 |
MsG0280010814.01.T01 | KEH39249.1 | 42.029 | 207 | 74 | 4 | 4 | 180 | 648 | 838 | 4.03E-20 | 106 |
MsG0280010814.01.T01 | KEH39249.1 | 35.659 | 258 | 118 | 5 | 4 | 219 | 487 | 738 | 5.26E-17 | 96.7 |
MsG0280010814.01.T01 | KEH39249.1 | 36.752 | 234 | 129 | 5 | 3 | 219 | 577 | 808 | 1.12E-15 | 92.8 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010814.01.T01 | Q67ZB3 | 30.818 | 159 | 103 | 2 | 307 | 462 | 302 | 456 | 4.25E-12 | 71.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010814.01.T01 | A0A072VB44 | 66.791 | 536 | 95 | 7 | 3 | 462 | 773 | 1301 | 0.0 | 607 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180002842.01 | MsG0280010814.01 | 0.800832 | 1.197857e-48 | 5.633577e-46 |
MsG0280010722.01 | MsG0280010814.01 | 0.808662 | 2.774773e-50 | 1.595749e-47 |
MsG0280010813.01 | MsG0280010814.01 | 0.808841 | 2.540493e-50 | 1.467912e-47 |
MsG0280010814.01 | MsG0280011175.01 | 0.810082 | 1.375309e-50 | 8.213036e-48 |
MsG0280010814.01 | MsG0480020002.01 | 0.807685 | 4.479049e-50 | 2.510813e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010814.01.T01 | MTR_2g091110 | 66.791 | 536 | 95 | 7 | 3 | 462 | 773 | 1301 | 0.0 | 607 |
MsG0280010814.01.T01 | MTR_2g091110 | 50.000 | 180 | 86 | 3 | 3 | 180 | 731 | 908 | 5.71e-31 | 127 |
MsG0280010814.01.T01 | MTR_2g091110 | 42.029 | 207 | 74 | 4 | 4 | 180 | 648 | 838 | 4.88e-24 | 106 |
MsG0280010814.01.T01 | MTR_2g091110 | 35.659 | 258 | 118 | 5 | 4 | 219 | 487 | 738 | 6.37e-21 | 96.7 |
MsG0280010814.01.T01 | MTR_2g091110 | 36.752 | 234 | 129 | 5 | 3 | 219 | 577 | 808 | 1.36e-19 | 92.8 |
MsG0280010814.01.T01 | MTR_2g091110 | 38.342 | 193 | 88 | 4 | 3 | 167 | 335 | 524 | 6.49e-13 | 71.6 |
MsG0280010814.01.T01 | MTR_2g091110 | 34.146 | 205 | 93 | 4 | 7 | 169 | 255 | 459 | 3.74e-11 | 66.2 |
MsG0280010814.01.T01 | MTR_5g078510 | 59.615 | 520 | 136 | 7 | 1 | 462 | 42 | 545 | 0.0 | 522 |
MsG0280010814.01.T01 | MTR_5g078510 | 50.526 | 95 | 46 | 1 | 73 | 166 | 1 | 95 | 4.14e-14 | 74.7 |
MsG0280010814.01.T01 | MTR_5g078510 | 35.789 | 190 | 56 | 4 | 44 | 183 | 2 | 175 | 9.81e-12 | 67.4 |
MsG0280010814.01.T01 | MTR_2g091090 | 59.382 | 453 | 138 | 6 | 33 | 463 | 226 | 654 | 7.49e-154 | 452 |
MsG0280010814.01.T01 | MTR_2g091240 | 57.616 | 453 | 166 | 6 | 32 | 462 | 142 | 590 | 6.74e-152 | 445 |
MsG0280010814.01.T01 | MTR_2g091250 | 52.324 | 581 | 154 | 11 | 3 | 462 | 716 | 1294 | 2.55e-147 | 452 |
MsG0280010814.01.T01 | MTR_2g091250 | 41.553 | 219 | 113 | 4 | 4 | 207 | 535 | 753 | 1.64e-25 | 110 |
MsG0280010814.01.T01 | MTR_2g091250 | 42.211 | 199 | 83 | 4 | 1 | 169 | 378 | 574 | 2.82e-23 | 103 |
MsG0280010814.01.T01 | MTR_2g091250 | 42.408 | 191 | 84 | 3 | 3 | 180 | 646 | 823 | 2.71e-18 | 88.6 |
MsG0280010814.01.T01 | MTR_2g091250 | 44.571 | 175 | 86 | 5 | 4 | 169 | 605 | 777 | 2.94e-18 | 88.6 |
MsG0280010814.01.T01 | MTR_2g091250 | 35.496 | 262 | 108 | 8 | 35 | 235 | 332 | 593 | 3.00e-16 | 82.4 |
MsG0280010814.01.T01 | MTR_2g091250 | 40.884 | 181 | 65 | 3 | 33 | 187 | 239 | 403 | 1.53e-15 | 80.1 |
MsG0280010814.01.T01 | MTR_2g091105 | 56.376 | 447 | 179 | 4 | 32 | 462 | 241 | 687 | 4.24e-135 | 405 |
MsG0280010814.01.T01 | MTR_2g091260 | 57.238 | 449 | 148 | 7 | 39 | 462 | 447 | 876 | 3.81e-134 | 408 |
MsG0280010814.01.T01 | MTR_2g091260 | 41.176 | 153 | 77 | 2 | 30 | 169 | 270 | 422 | 1.68e-15 | 79.7 |
MsG0280010814.01.T01 | MTR_6g045183 | 52.024 | 494 | 197 | 9 | 3 | 462 | 280 | 767 | 6.56e-133 | 402 |
MsG0280010814.01.T01 | MTR_2g091245 | 50.106 | 471 | 205 | 8 | 9 | 462 | 203 | 660 | 1.07e-120 | 367 |
MsG0280010814.01.T01 | MTR_2g010420 | 49.269 | 479 | 220 | 12 | 3 | 462 | 365 | 839 | 1.04e-118 | 367 |
MsG0280010814.01.T01 | MTR_2g010420 | 44.872 | 156 | 82 | 3 | 15 | 168 | 307 | 460 | 1.39e-20 | 95.5 |
MsG0280010814.01.T01 | MTR_2g091290 | 44.088 | 499 | 219 | 7 | 4 | 444 | 323 | 819 | 9.19e-107 | 335 |
MsG0280010814.01.T01 | MTR_2g091290 | 42.446 | 139 | 77 | 2 | 32 | 169 | 310 | 446 | 1.01e-17 | 86.7 |
MsG0280010814.01.T01 | MTR_2g091025 | 46.667 | 450 | 202 | 8 | 1 | 420 | 135 | 576 | 2.11e-104 | 322 |
MsG0280010814.01.T01 | MTR_2g091080 | 57.995 | 369 | 92 | 6 | 1 | 362 | 449 | 761 | 1.83e-103 | 325 |
MsG0280010814.01.T01 | MTR_2g091080 | 42.029 | 138 | 63 | 2 | 33 | 169 | 258 | 379 | 1.15e-14 | 77.0 |
MsG0280010814.01.T01 | MTR_2g091080 | 33.824 | 204 | 110 | 5 | 7 | 187 | 245 | 446 | 5.11e-12 | 68.6 |
MsG0280010814.01.T01 | MTR_2g091370 | 47.034 | 472 | 209 | 9 | 3 | 461 | 394 | 837 | 5.73e-103 | 326 |
MsG0280010814.01.T01 | MTR_3g110385 | 46.250 | 480 | 204 | 11 | 3 | 433 | 332 | 806 | 2.98e-93 | 300 |
MsG0280010814.01.T01 | MTR_3g110385 | 41.040 | 173 | 91 | 4 | 4 | 167 | 228 | 398 | 6.67e-17 | 84.0 |
MsG0280010814.01.T01 | MTR_3g110385 | 41.758 | 182 | 72 | 4 | 33 | 180 | 216 | 397 | 9.10e-16 | 80.5 |
MsG0280010814.01.T01 | MTR_2g093010 | 48.964 | 386 | 137 | 9 | 32 | 381 | 479 | 840 | 4.19e-86 | 281 |
MsG0280010814.01.T01 | MTR_2g093010 | 46.043 | 139 | 72 | 2 | 32 | 169 | 311 | 447 | 3.92e-15 | 78.6 |
MsG0280010814.01.T01 | MTR_2g093010 | 48.964 | 386 | 137 | 9 | 32 | 381 | 480 | 841 | 4.45e-86 | 281 |
MsG0280010814.01.T01 | MTR_2g093010 | 46.043 | 139 | 72 | 2 | 32 | 169 | 312 | 448 | 3.78e-15 | 78.6 |
MsG0280010814.01.T01 | MTR_2g091015 | 46.530 | 389 | 144 | 8 | 30 | 372 | 511 | 881 | 7.82e-80 | 265 |
MsG0280010814.01.T01 | MTR_2g091015 | 52.713 | 129 | 58 | 2 | 32 | 159 | 278 | 404 | 8.18e-21 | 96.3 |
MsG0280010814.01.T01 | MTR_2g091015 | 39.205 | 176 | 86 | 3 | 3 | 169 | 388 | 551 | 2.42e-15 | 79.3 |
MsG0280010814.01.T01 | MTR_2g091015 | 33.468 | 248 | 103 | 8 | 4 | 191 | 291 | 536 | 6.05e-13 | 71.6 |
MsG0280010814.01.T01 | MTR_2g091015 | 41.667 | 156 | 61 | 5 | 44 | 169 | 203 | 358 | 4.12e-11 | 65.9 |
MsG0280010814.01.T01 | MTR_5g038810 | 45.989 | 374 | 170 | 7 | 12 | 376 | 149 | 499 | 7.90e-78 | 256 |
MsG0280010814.01.T01 | MTR_2g091030 | 49.419 | 344 | 140 | 8 | 34 | 359 | 261 | 588 | 1.96e-70 | 234 |
MsG0280010814.01.T01 | MTR_2g091335 | 49.711 | 346 | 145 | 7 | 31 | 359 | 271 | 604 | 8.84e-70 | 233 |
MsG0280010814.01.T01 | MTR_2g010420 | 44.681 | 376 | 186 | 11 | 3 | 359 | 365 | 737 | 3.15e-69 | 234 |
MsG0280010814.01.T01 | MTR_2g010420 | 44.872 | 156 | 82 | 3 | 15 | 168 | 307 | 460 | 1.80e-20 | 95.1 |
MsG0280010814.01.T01 | MTR_2g091070 | 59.615 | 208 | 83 | 1 | 214 | 420 | 2 | 209 | 3.07e-67 | 214 |
MsG0280010814.01.T01 | MTR_2g104190 | 43.257 | 393 | 144 | 9 | 15 | 405 | 307 | 622 | 6.54e-67 | 226 |
MsG0280010814.01.T01 | MTR_2g091285 | 45.455 | 341 | 168 | 6 | 34 | 359 | 252 | 589 | 6.64e-64 | 217 |
MsG0280010814.01.T01 | MTR_2g090980 | 49.071 | 269 | 112 | 5 | 115 | 381 | 293 | 538 | 8.31e-64 | 216 |
MsG0280010814.01.T01 | MTR_2g103620 | 42.258 | 310 | 105 | 9 | 69 | 359 | 124 | 378 | 1.75e-53 | 184 |
MsG0280010814.01.T01 | MTR_8g467200 | 38.035 | 397 | 206 | 8 | 75 | 457 | 32 | 402 | 7.75e-52 | 182 |
MsG0280010814.01.T01 | MTR_2g103640 | 40.000 | 290 | 130 | 6 | 67 | 332 | 84 | 353 | 6.86e-47 | 166 |
MsG0280010814.01.T01 | MTR_2g091010 | 35.934 | 487 | 220 | 15 | 3 | 461 | 314 | 736 | 9.47e-46 | 169 |
MsG0280010814.01.T01 | MTR_2g091040 | 74.286 | 105 | 27 | 0 | 359 | 463 | 422 | 526 | 1.28e-45 | 166 |
MsG0280010814.01.T01 | MTR_2g091040 | 41.892 | 222 | 90 | 4 | 33 | 239 | 226 | 423 | 5.51e-32 | 128 |
MsG0280010814.01.T01 | MTR_4g046660 | 43.985 | 266 | 137 | 4 | 195 | 457 | 419 | 675 | 4.62e-42 | 159 |
MsG0280010814.01.T01 | MTR_4g084930 | 60.204 | 98 | 37 | 2 | 361 | 458 | 37 | 132 | 3.26e-29 | 112 |
MsG0280010814.01.T01 | MTR_8g107320 | 35.648 | 216 | 92 | 4 | 131 | 346 | 36 | 204 | 7.82e-29 | 113 |
MsG0280010814.01.T01 | MTR_8g106540 | 31.683 | 303 | 151 | 8 | 69 | 369 | 43 | 291 | 4.92e-24 | 102 |
MsG0280010814.01.T01 | MTR_2g091280 | 43.668 | 229 | 99 | 8 | 3 | 205 | 321 | 545 | 2.62e-23 | 103 |
MsG0280010814.01.T01 | MTR_2g091280 | 50.327 | 153 | 66 | 3 | 32 | 183 | 281 | 424 | 1.92e-22 | 100 |
MsG0280010814.01.T01 | MTR_2g091280 | 42.767 | 159 | 84 | 4 | 3 | 156 | 474 | 630 | 8.79e-14 | 74.3 |
MsG0280010814.01.T01 | MTR_2g091280 | 47.552 | 143 | 72 | 2 | 32 | 173 | 563 | 703 | 2.18e-13 | 72.8 |
MsG0280010814.01.T01 | MTR_7g056317 | 67.010 | 97 | 31 | 1 | 276 | 372 | 1 | 96 | 9.00e-22 | 90.5 |
MsG0280010814.01.T01 | MTR_2g090640 | 49.606 | 127 | 61 | 2 | 34 | 157 | 145 | 271 | 2.14e-21 | 97.4 |
MsG0280010814.01.T01 | MTR_2g090640 | 41.398 | 186 | 65 | 5 | 33 | 187 | 232 | 404 | 1.78e-17 | 85.5 |
MsG0280010814.01.T01 | MTR_2g090640 | 42.135 | 178 | 73 | 4 | 3 | 152 | 243 | 418 | 3.23e-16 | 81.3 |
MsG0280010814.01.T01 | MTR_2g091325 | 43.750 | 176 | 88 | 3 | 4 | 170 | 321 | 494 | 2.91e-21 | 97.1 |
MsG0280010814.01.T01 | MTR_2g091325 | 39.899 | 198 | 93 | 4 | 3 | 187 | 292 | 476 | 6.71e-19 | 89.7 |
MsG0280010814.01.T01 | MTR_2g091325 | 44.048 | 168 | 82 | 4 | 3 | 169 | 260 | 416 | 1.71e-18 | 88.6 |
MsG0280010814.01.T01 | MTR_2g091325 | 40.936 | 171 | 80 | 5 | 4 | 153 | 377 | 547 | 3.81e-12 | 68.9 |
MsG0280010814.01.T01 | MTR_4g084920 | 40.127 | 157 | 58 | 4 | 141 | 294 | 168 | 291 | 2.95e-19 | 89.0 |
MsG0280010814.01.T01 | MTR_7g056313 | 49.593 | 123 | 59 | 2 | 32 | 153 | 248 | 368 | 4.10e-18 | 86.3 |
MsG0280010814.01.T01 | MTR_7g056313 | 43.373 | 166 | 82 | 4 | 34 | 191 | 208 | 369 | 3.81e-17 | 83.2 |
MsG0280010814.01.T01 | MTR_7g056313 | 40.385 | 156 | 63 | 4 | 44 | 169 | 173 | 328 | 8.42e-11 | 63.9 |
MsG0280010814.01.T01 | MTR_2g091330 | 41.611 | 149 | 74 | 2 | 34 | 169 | 269 | 417 | 7.44e-16 | 80.5 |
MsG0280010814.01.T01 | MTR_2g091330 | 41.667 | 132 | 55 | 2 | 32 | 163 | 435 | 544 | 8.18e-13 | 70.9 |
MsG0280010814.01.T01 | MTR_2g091330 | 40.132 | 152 | 82 | 3 | 3 | 153 | 447 | 590 | 3.17e-12 | 68.9 |
MsG0280010814.01.T01 | MTR_2g091360 | 44.800 | 125 | 56 | 3 | 34 | 157 | 41 | 153 | 7.65e-16 | 79.0 |
MsG0280010814.01.T01 | MTR_4g095080 | 30.364 | 247 | 144 | 8 | 230 | 450 | 190 | 434 | 9.63e-15 | 77.0 |
MsG0280010814.01.T01 | MTR_2g091315 | 39.521 | 167 | 79 | 3 | 32 | 178 | 388 | 552 | 7.06e-13 | 71.2 |
MsG0280010814.01.T01 | MTR_2g091315 | 42.969 | 128 | 68 | 3 | 15 | 137 | 426 | 553 | 1.30e-12 | 70.1 |
MsG0280010814.01.T01 | MTR_5g094400 | 23.988 | 346 | 218 | 10 | 144 | 457 | 49 | 381 | 2.25e-12 | 69.7 |
MsG0280010814.01.T01 | MTR_2g091005 | 42.157 | 102 | 37 | 2 | 361 | 462 | 530 | 609 | 6.82e-12 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010814.01.T01 | AT5G48385 | 30.818 | 159 | 103 | 2 | 307 | 462 | 302 | 456 | 4.34e-13 | 71.6 |
MsG0280010814.01.T01 | AT5G16320 | 24.576 | 236 | 172 | 4 | 230 | 463 | 131 | 362 | 4.99e-11 | 65.1 |
Find 78 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACAAATCAGTTTGGCATTC+TGG | 0.156163 | 2:-75373103 | None:intergenic |
CGATCCATCAAAACTTGTTT+TGG | 0.185401 | 2:+75371902 | MsG0280010814.01.T01:CDS |
CGTGGAGCTGTTTGGATGCC+TGG | 0.284801 | 2:+75372223 | MsG0280010814.01.T01:CDS |
GAAGCAGACCCGCAGATTCT+AGG | 0.295234 | 2:-75373341 | None:intergenic |
AGACAATACTGAAAATTCTT+TGG | 0.311409 | 2:+75372094 | MsG0280010814.01.T01:CDS |
CTCTCACAAGGTTCAATATC+TGG | 0.316877 | 2:-75372026 | None:intergenic |
AGATCAAGAAATTGCTAGTC+TGG | 0.345057 | 2:+75373287 | MsG0280010814.01.T01:CDS |
GTTGTTCCAGCAGATAGATT+TGG | 0.356437 | 2:-75371989 | None:intergenic |
TTGATTTAAACTTCTTCAAT+TGG | 0.365697 | 2:-75370580 | None:intergenic |
AAATAAGCTAATGTAAGAAA+TGG | 0.371185 | 2:+75373427 | MsG0280010814.01.T01:three_prime_UTR |
TTTCGATGAAGATGAAGTTC+TGG | 0.371612 | 2:+75372166 | MsG0280010814.01.T01:CDS |
CCAACTTATATGCAAAATAA+AGG | 0.375327 | 2:+75371029 | MsG0280010814.01.T01:CDS |
TTGATTCATGCTTCTTCACT+CGG | 0.380428 | 2:-75370918 | None:intergenic |
CTTGAGCTAAAAGCACATAA+AGG | 0.381897 | 2:+75373387 | MsG0280010814.01.T01:CDS |
TGGTGGAATAAGTTTGCAAT+TGG | 0.382720 | 2:+75371809 | MsG0280010814.01.T01:CDS |
AATAAGCTAATGTAAGAAAT+GGG | 0.387128 | 2:+75373428 | MsG0280010814.01.T01:three_prime_UTR |
TCTAAAGATAACCAACTTGT+AGG | 0.392565 | 2:+75370557 | MsG0280010814.01.T01:CDS |
TCCTTAGCTTGTTCTATCAA+TGG | 0.393542 | 2:-75370446 | None:intergenic |
GACTGTTCTACAATGCATTT+CGG | 0.400701 | 2:+75373311 | MsG0280010814.01.T01:CDS |
GATCATTCAAGTCGTGCCTT+TGG | 0.412926 | 2:+75371789 | MsG0280010814.01.T01:CDS |
AAAATTGCCGTGGAGCTGTT+TGG | 0.424002 | 2:+75372215 | MsG0280010814.01.T01:CDS |
TTTAGATTCCACTCCTTCAC+TGG | 0.430384 | 2:-75370498 | None:intergenic |
ACTAGCAATTTCTTGATCTC+TGG | 0.433462 | 2:-75373283 | None:intergenic |
CATAATTCCAGAGGGTCAAA+AGG | 0.444501 | 2:+75371941 | MsG0280010814.01.T01:CDS |
AACCAACTCCGTTGAAATCA+AGG | 0.446102 | 2:+75373142 | MsG0280010814.01.T01:CDS |
ACTGCTCTCACAAATCAGTT+TGG | 0.447345 | 2:-75373111 | None:intergenic |
AACCTTGATTTCAACGGAGT+TGG | 0.457408 | 2:-75373144 | None:intergenic |
CATTCAAGTCGTGCCTTTGG+TGG | 0.464298 | 2:+75371792 | MsG0280010814.01.T01:CDS |
TAGACTGTAACTCCTTCCCT+TGG | 0.466707 | 2:-75370538 | None:intergenic |
CAATACTGAAAATTCTTTGG+CGG | 0.473974 | 2:+75372097 | MsG0280010814.01.T01:CDS |
GGTGGAATAAGTTTGCAATT+GGG | 0.475465 | 2:+75371810 | MsG0280010814.01.T01:CDS |
ATAGTAGTGTATAAGTTAGC+AGG | 0.478744 | 2:-75373461 | None:intergenic |
AGTGAAGGGCATAAAATCAA+TGG | 0.500382 | 2:+75371086 | MsG0280010814.01.T01:CDS |
TGATTACCAAATCTATCTGC+TGG | 0.502562 | 2:+75371983 | MsG0280010814.01.T01:CDS |
TCTTCAATTGGCCTACAAGT+TGG | 0.502924 | 2:-75370568 | None:intergenic |
GATCAAGAAATTGCTAGTCT+GGG | 0.505230 | 2:+75373288 | MsG0280010814.01.T01:CDS |
GTGGAGCTGTTTGGATGCCT+GGG | 0.508191 | 2:+75372224 | MsG0280010814.01.T01:CDS |
ATATGCAGTTGCATCTTACA+TGG | 0.508808 | 2:+75371764 | MsG0280010814.01.T01:intron |
ATCTGCGGGTCTGCTTCATA+AGG | 0.510731 | 2:+75373347 | MsG0280010814.01.T01:CDS |
AGAATTTGAAATTCTAGTGA+AGG | 0.519000 | 2:+75370948 | MsG0280010814.01.T01:CDS |
TTGATTTAAAGTCCTCAACT+TGG | 0.529306 | 2:-75371145 | None:intergenic |
GGAGTTTGAATCAAAAGAGA+AGG | 0.529370 | 2:+75371050 | MsG0280010814.01.T01:CDS |
TAGATTCAAGCTCCTTCACT+CGG | 0.531255 | 2:-75370876 | None:intergenic |
TCTAAAGAGGATGACTTTGA+AGG | 0.531728 | 2:+75370895 | MsG0280010814.01.T01:CDS |
AGCAATTGAAAGGACAGTTA+AGG | 0.536768 | 2:+75370822 | MsG0280010814.01.T01:CDS |
GGAATTTGAAGAACAAGTGA+AGG | 0.538542 | 2:+75371071 | MsG0280010814.01.T01:CDS |
GCCATTGATAGAACAAGCTA+AGG | 0.541219 | 2:+75370445 | MsG0280010814.01.T01:CDS |
AAGAAGCTGTTTGAAAGCCA+AGG | 0.543636 | 2:+75370521 | MsG0280010814.01.T01:CDS |
GGCGCAAGCAAGAAAACTGA+TGG | 0.551669 | 2:+75371831 | MsG0280010814.01.T01:CDS |
GAAGGAGCTTGAATCTAAAG+AGG | 0.560447 | 2:+75370882 | MsG0280010814.01.T01:CDS |
TTTGACCCTCTGGAATTATG+GGG | 0.562374 | 2:-75371938 | None:intergenic |
CTTGATAGCCAGTGAAGGAG+TGG | 0.562641 | 2:+75370490 | MsG0280010814.01.T01:CDS |
ATAATTCCAGAGGGTCAAAA+GGG | 0.569842 | 2:+75371942 | MsG0280010814.01.T01:CDS |
CTTATACACTACTATTGTTG+AGG | 0.574242 | 2:+75373469 | MsG0280010814.01.T01:three_prime_UTR |
TCAAAACAGAAGCAATTGAA+AGG | 0.575242 | 2:+75370812 | MsG0280010814.01.T01:CDS |
AGAAGCAATTTGAAGAACGA+TGG | 0.578241 | 2:+75371171 | MsG0280010814.01.T01:CDS |
GACAACAGCCTAGAATCTGC+GGG | 0.580715 | 2:+75373333 | MsG0280010814.01.T01:CDS |
GGGCATAAAATCAATGGAGG+AGG | 0.583270 | 2:+75371092 | MsG0280010814.01.T01:CDS |
CAGAAGAACCTTGATTTCAA+CGG | 0.584171 | 2:-75373150 | None:intergenic |
AGGAGCTCAAATCAAAATTG+AGG | 0.584645 | 2:+75370423 | MsG0280010814.01.T01:CDS |
TGCTCTGCACAAAATTGCCG+TGG | 0.597313 | 2:+75372205 | MsG0280010814.01.T01:CDS |
TTGCAAACTTATTCCACCAA+AGG | 0.603660 | 2:-75371805 | None:intergenic |
TTGTTAAGCGTCTTATCATG+AGG | 0.609658 | 2:+75372994 | MsG0280010814.01.T01:CDS |
ATAAGCTAATGTAAGAAATG+GGG | 0.612623 | 2:+75373429 | MsG0280010814.01.T01:three_prime_UTR |
AGAAGCTGTTTGAAAGCCAA+GGG | 0.615446 | 2:+75370522 | MsG0280010814.01.T01:CDS |
CAGGCATCCAAACAGCTCCA+CGG | 0.619055 | 2:-75372222 | None:intergenic |
GCTGTTTGAAAGCCAAGGGA+AGG | 0.620349 | 2:+75370526 | MsG0280010814.01.T01:CDS |
GGACAACAGCCTAGAATCTG+CGG | 0.622530 | 2:+75373332 | MsG0280010814.01.T01:CDS |
GCATTGCGAAAGCATGAGGA+AGG | 0.624462 | 2:+75370403 | None:intergenic |
AGCAACTTGATAGCCAGTGA+AGG | 0.626347 | 2:+75370485 | MsG0280010814.01.T01:CDS |
GCATTTCGAAAGCCAAGTTG+AGG | 0.630511 | 2:+75371133 | MsG0280010814.01.T01:CDS |
ATCAAGAAATTGCTAGTCTG+GGG | 0.646733 | 2:+75373289 | MsG0280010814.01.T01:CDS |
AAACTCTGTTTGCAAAACCC+AGG | 0.651184 | 2:-75372241 | None:intergenic |
GAATTTGAAGAACAAGTGAA+GGG | 0.651910 | 2:+75371072 | MsG0280010814.01.T01:CDS |
TGCATATAACTTGACTGACA+AGG | 0.669736 | 2:+75373049 | MsG0280010814.01.T01:CDS |
GAAGGGCATAAAATCAATGG+AGG | 0.690243 | 2:+75371089 | MsG0280010814.01.T01:CDS |
CTGAACCCCATAATTCCAGA+GGG | 0.696990 | 2:+75371933 | MsG0280010814.01.T01:CDS |
ACTGAACCCCATAATTCCAG+AGG | 0.700899 | 2:+75371932 | MsG0280010814.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATATATATACGTGAT+TGG | - | Chr2:75372582-75372601 | None:intergenic | 15.0% |
!! | ATTTGAAAATGATATAGTAA+AGG | + | Chr2:75372441-75372460 | MsG0280010814.01.T01:intron | 15.0% |
!!! | AATAAATCCTTTTAAGAAAT+CGG | + | Chr2:75372736-75372755 | MsG0280010814.01.T01:intron | 15.0% |
!!! | TATTTTGATATGTATAAATG+TGG | - | Chr2:75372548-75372567 | None:intergenic | 15.0% |
!! | AAATAAGCTAATGTAAGAAA+TGG | + | Chr2:75373427-75373446 | MsG0280010814.01.T01:three_prime_UTR | 20.0% |
!! | AAGGAAAAAATATATTGATG+GGG | + | Chr2:75371292-75371311 | MsG0280010814.01.T01:intron | 20.0% |
!! | AATAAGCTAATGTAAGAAAT+GGG | + | Chr2:75373428-75373447 | MsG0280010814.01.T01:three_prime_UTR | 20.0% |
!! | CAAGGAAAAAATATATTGAT+GGG | + | Chr2:75371291-75371310 | MsG0280010814.01.T01:intron | 20.0% |
!! | TATTAAGAATTAAGTAGATC+AGG | - | Chr2:75371414-75371433 | None:intergenic | 20.0% |
!! | TATTTATAACTAAGATGCAA+GGG | - | Chr2:75373230-75373249 | None:intergenic | 20.0% |
!! | TCAAGGAAAAAATATATTGA+TGG | + | Chr2:75371290-75371309 | MsG0280010814.01.T01:intron | 20.0% |
!! | TTATTTATAACTAAGATGCA+AGG | - | Chr2:75373231-75373250 | None:intergenic | 20.0% |
!! | TTGATTTAAACTTCTTCAAT+TGG | - | Chr2:75370583-75370602 | None:intergenic | 20.0% |
!!! | ACATAAAGGTTTTTAGTTTT+GGG | + | Chr2:75373401-75373420 | MsG0280010814.01.T01:exon | 20.0% |
!!! | ATGTAGTTTTAATTACATTG+AGG | + | Chr2:75371565-75371584 | MsG0280010814.01.T01:intron | 20.0% |
!!! | TGTAGTTTTAATTACATTGA+GGG | + | Chr2:75371566-75371585 | MsG0280010814.01.T01:intron | 20.0% |
! | AAATTGAACTGATACGTAAT+TGG | + | Chr2:75372826-75372845 | MsG0280010814.01.T01:intron | 25.0% |
! | AGACAATACTGAAAATTCTT+TGG | + | Chr2:75372094-75372113 | MsG0280010814.01.T01:CDS | 25.0% |
! | ATAAGCTAATGTAAGAAATG+GGG | + | Chr2:75373429-75373448 | MsG0280010814.01.T01:three_prime_UTR | 25.0% |
! | CCAACTTATATGCAAAATAA+AGG | + | Chr2:75371029-75371048 | MsG0280010814.01.T01:CDS | 25.0% |
! | GCAAAAAAGGAATCATTTAA+CGG | + | Chr2:75372703-75372722 | MsG0280010814.01.T01:intron | 25.0% |
! | TAAAACCAGAGAACAAAAAA+CGG | - | Chr2:75372511-75372530 | None:intergenic | 25.0% |
! | TTAAGAGAAAATTGACATCT+CGG | + | Chr2:75372882-75372901 | MsG0280010814.01.T01:intron | 25.0% |
! | TTAGACTCAATTTCTTCATT+TGG | - | Chr2:75370666-75370685 | None:intergenic | 25.0% |
! | TTTACCCAGTTTATTACTTA+CGG | + | Chr2:75372378-75372397 | MsG0280010814.01.T01:intron | 25.0% |
!! | AGAATTTGAAATTCTAGTGA+AGG | + | Chr2:75370948-75370967 | MsG0280010814.01.T01:CDS | 25.0% |
!!! | ATATATTTTTTCCTTGACAC+AGG | - | Chr2:75371287-75371306 | None:intergenic | 25.0% |
!!! | ATTTCCAAAACAAGTTTTGA+TGG | - | Chr2:75371909-75371928 | None:intergenic | 25.0% |
!!! | CACATAAAGGTTTTTAGTTT+TGG | + | Chr2:75373400-75373419 | MsG0280010814.01.T01:exon | 25.0% |
!!! | CCTTTATTTTGCATATAAGT+TGG | - | Chr2:75371032-75371051 | None:intergenic | 25.0% |
!!! | GTAGTTTTAATTACATTGAG+GGG | + | Chr2:75371567-75371586 | MsG0280010814.01.T01:intron | 25.0% |
AAGGAATCATTTAACGGTAA+TGG | + | Chr2:75372709-75372728 | MsG0280010814.01.T01:intron | 30.0% | |
AGAAGTTTAAATCAAACCAG+AGG | + | Chr2:75370588-75370607 | MsG0280010814.01.T01:intron | 30.0% | |
AGAGAATAAGTTCAAAGCAA+AGG | + | Chr2:75371211-75371230 | MsG0280010814.01.T01:intron | 30.0% | |
AGGAATCATTTAACGGTAAT+GGG | + | Chr2:75372710-75372729 | MsG0280010814.01.T01:intron | 30.0% | |
ATAGTAGTGTATAAGTTAGC+AGG | - | Chr2:75373464-75373483 | None:intergenic | 30.0% | |
CAATACTGAAAATTCTTTGG+CGG | + | Chr2:75372097-75372116 | MsG0280010814.01.T01:CDS | 30.0% | |
CACAAACTGTCAAACTAATT+TGG | + | Chr2:75371500-75371519 | MsG0280010814.01.T01:intron | 30.0% | |
CTAAAAATAGTTGCACCAAT+AGG | - | Chr2:75371604-75371623 | None:intergenic | 30.0% | |
CTTATACACTACTATTGTTG+AGG | + | Chr2:75373469-75373488 | MsG0280010814.01.T01:three_prime_UTR | 30.0% | |
GAAGAAATTGAGTCTAAAGA+AGG | + | Chr2:75370669-75370688 | MsG0280010814.01.T01:intron | 30.0% | |
GAAGTTTAAATCAAACCAGA+GGG | + | Chr2:75370589-75370608 | MsG0280010814.01.T01:intron | 30.0% | |
GAATTTGAAGAACAAGTGAA+GGG | + | Chr2:75371072-75371091 | MsG0280010814.01.T01:CDS | 30.0% | |
TCAAAACAGAAGCAATTGAA+AGG | + | Chr2:75370812-75370831 | MsG0280010814.01.T01:CDS | 30.0% | |
TCATCATCATCATCATTAAG+AGG | - | Chr2:75371381-75371400 | None:intergenic | 30.0% | |
TCTAAAGATAACCAACTTGT+AGG | + | Chr2:75370557-75370576 | MsG0280010814.01.T01:CDS | 30.0% | |
TTACAAGAAAAGTGGTTTGA+AGG | + | Chr2:75371248-75371267 | MsG0280010814.01.T01:intron | 30.0% | |
! | CAAATTAGTTTGACAGTTTG+TGG | - | Chr2:75371502-75371521 | None:intergenic | 30.0% |
! | TTGATTTAAAGTCCTCAACT+TGG | - | Chr2:75371148-75371167 | None:intergenic | 30.0% |
!! | ATGATAAAATGGAGGCATTT+CGG | - | Chr2:75372676-75372695 | None:intergenic | 30.0% |
!! | CAAAACAAGTTTTGATGGAT+CGG | - | Chr2:75371904-75371923 | None:intergenic | 30.0% |
!! | GAAGCATTTTGAAAATCAAG+TGG | + | Chr2:75370778-75370797 | MsG0280010814.01.T01:intron | 30.0% |
!!! | TCTAAAGAGAAGCATTTTGA+TGG | + | Chr2:75370853-75370872 | MsG0280010814.01.T01:CDS | 30.0% |
ACTAGCAATTTCTTGATCTC+TGG | - | Chr2:75373286-75373305 | None:intergenic | 35.0% | |
AGAAGCAATTTGAAGAACGA+TGG | + | Chr2:75371171-75371190 | MsG0280010814.01.T01:CDS | 35.0% | |
AGATCAAGAAATTGCTAGTC+TGG | + | Chr2:75373287-75373306 | MsG0280010814.01.T01:CDS | 35.0% | |
AGCAATTGAAAGGACAGTTA+AGG | + | Chr2:75370822-75370841 | MsG0280010814.01.T01:CDS | 35.0% | |
AGCTCAACTTACAAGAAAAG+TGG | + | Chr2:75371240-75371259 | MsG0280010814.01.T01:intron | 35.0% | |
AGGAGCTCAAATCAAAATTG+AGG | + | Chr2:75370423-75370442 | MsG0280010814.01.T01:CDS | 35.0% | |
ATAATTCCAGAGGGTCAAAA+GGG | + | Chr2:75371942-75371961 | MsG0280010814.01.T01:CDS | 35.0% | |
ATATGCAGTTGCATCTTACA+TGG | + | Chr2:75371764-75371783 | MsG0280010814.01.T01:intron | 35.0% | |
ATTGATGGGGAAAAAGAATC+AGG | + | Chr2:75371305-75371324 | MsG0280010814.01.T01:intron | 35.0% | |
CAGAAGAACCTTGATTTCAA+CGG | - | Chr2:75373153-75373172 | None:intergenic | 35.0% | |
GACTGTTCTACAATGCATTT+CGG | + | Chr2:75373311-75373330 | MsG0280010814.01.T01:CDS | 35.0% | |
GAGCATAAATCAAAAGAGAG+AGG | + | Chr2:75370719-75370738 | MsG0280010814.01.T01:intron | 35.0% | |
GAGTTGTCCGATTTCTTAAA+AGG | - | Chr2:75372746-75372765 | None:intergenic | 35.0% | |
GGAATTTGAAGAACAAGTGA+AGG | + | Chr2:75371071-75371090 | MsG0280010814.01.T01:CDS | 35.0% | |
GGAGTTTGAATCAAAAGAGA+AGG | + | Chr2:75371050-75371069 | MsG0280010814.01.T01:CDS | 35.0% | |
GGTGGAATAAGTTTGCAATT+GGG | + | Chr2:75371810-75371829 | MsG0280010814.01.T01:CDS | 35.0% | |
GTGCAAAGATACAAAGATCA+AGG | + | Chr2:75372786-75372805 | MsG0280010814.01.T01:intron | 35.0% | |
TAAGTTCAAAGCAAAGGTGA+AGG | + | Chr2:75371217-75371236 | MsG0280010814.01.T01:intron | 35.0% | |
TATCATTGAAGGGGCAAAAA+AGG | + | Chr2:75372690-75372709 | MsG0280010814.01.T01:intron | 35.0% | |
TCTAAAGAGGATGACTTTGA+AGG | + | Chr2:75370895-75370914 | MsG0280010814.01.T01:CDS | 35.0% | |
TGATTACCAAATCTATCTGC+TGG | + | Chr2:75371983-75372002 | MsG0280010814.01.T01:CDS | 35.0% | |
TGCATATAACTTGACTGACA+AGG | + | Chr2:75373049-75373068 | MsG0280010814.01.T01:CDS | 35.0% | |
TGGTGGAATAAGTTTGCAAT+TGG | + | Chr2:75371809-75371828 | MsG0280010814.01.T01:CDS | 35.0% | |
TTGATTCATGCTTCTTCACT+CGG | - | Chr2:75370921-75370940 | None:intergenic | 35.0% | |
TTGATTTATGCTCCTTCACT+CGG | - | Chr2:75370712-75370731 | None:intergenic | 35.0% | |
TTGCAAACTTATTCCACCAA+AGG | - | Chr2:75371808-75371827 | None:intergenic | 35.0% | |
TTGCCCCTTCAATGATAAAA+TGG | - | Chr2:75372687-75372706 | None:intergenic | 35.0% | |
TTGTTAAGCGTCTTATCATG+AGG | + | Chr2:75372994-75373013 | MsG0280010814.01.T01:CDS | 35.0% | |
TTTCGATGAAGATGAAGTTC+TGG | + | Chr2:75372166-75372185 | MsG0280010814.01.T01:CDS | 35.0% | |
! | AGTGAAGGGCATAAAATCAA+TGG | + | Chr2:75371086-75371105 | MsG0280010814.01.T01:CDS | 35.0% |
! | ATCAAGAAATTGCTAGTCTG+GGG | + | Chr2:75373289-75373308 | MsG0280010814.01.T01:CDS | 35.0% |
! | CCTCCATTTTATCATTGAAG+GGG | + | Chr2:75372681-75372700 | MsG0280010814.01.T01:intron | 35.0% |
! | CTTGAGCTAAAAGCACATAA+AGG | + | Chr2:75373387-75373406 | MsG0280010814.01.T01:CDS | 35.0% |
! | GATCAAGAAATTGCTAGTCT+GGG | + | Chr2:75373288-75373307 | MsG0280010814.01.T01:CDS | 35.0% |
! | GCCTCCATTTTATCATTGAA+GGG | + | Chr2:75372680-75372699 | MsG0280010814.01.T01:intron | 35.0% |
! | TGCCTCCATTTTATCATTGA+AGG | + | Chr2:75372679-75372698 | MsG0280010814.01.T01:intron | 35.0% |
!! | CGATCCATCAAAACTTGTTT+TGG | + | Chr2:75371902-75371921 | MsG0280010814.01.T01:CDS | 35.0% |
!! | CTTTTGACTCTAACTCAACT+TGG | - | Chr2:75371005-75371024 | None:intergenic | 35.0% |
!! | GCATTTTGAAAATCAAGTGG+AGG | + | Chr2:75370781-75370800 | MsG0280010814.01.T01:intron | 35.0% |
!! | TCCTTAGCTTGTTCTATCAA+TGG | - | Chr2:75370449-75370468 | None:intergenic | 35.0% |
!!! | AATGCTTTTTCTCTCTCACA+AGG | - | Chr2:75372041-75372060 | None:intergenic | 35.0% |
!!! | TTTTGACCCTCTGGAATTAT+GGG | - | Chr2:75371942-75371961 | None:intergenic | 35.0% |
!!! | TTTTGCCGTTTTTTGTTCTC+TGG | + | Chr2:75372503-75372522 | MsG0280010814.01.T01:intron | 35.0% |
AAACTCTGTTTGCAAAACCC+AGG | - | Chr2:75372244-75372263 | None:intergenic | 40.0% | |
AACCAACTCCGTTGAAATCA+AGG | + | Chr2:75373142-75373161 | MsG0280010814.01.T01:CDS | 40.0% | |
AACCTTGATTTCAACGGAGT+TGG | - | Chr2:75373147-75373166 | None:intergenic | 40.0% | |
AAGAAGCTGTTTGAAAGCCA+AGG | + | Chr2:75370521-75370540 | MsG0280010814.01.T01:CDS | 40.0% | |
ACCCACCGTAAGTAATAAAC+TGG | - | Chr2:75372386-75372405 | None:intergenic | 40.0% | |
ACCCAGTTTATTACTTACGG+TGG | + | Chr2:75372381-75372400 | MsG0280010814.01.T01:intron | 40.0% | |
ACTGCTCTCACAAATCAGTT+TGG | - | Chr2:75373114-75373133 | None:intergenic | 40.0% | |
AGAAGCTGTTTGAAAGCCAA+GGG | + | Chr2:75370522-75370541 | MsG0280010814.01.T01:CDS | 40.0% | |
AGAAGGAAGCAACTTCTTGA+AGG | + | Chr2:75370686-75370705 | MsG0280010814.01.T01:intron | 40.0% | |
ATCCTGAGTGCAAATAGGAA+TGG | - | Chr2:75372351-75372370 | None:intergenic | 40.0% | |
CACAAATCAGTTTGGCATTC+TGG | - | Chr2:75373106-75373125 | None:intergenic | 40.0% | |
CATAATTCCAGAGGGTCAAA+AGG | + | Chr2:75371941-75371960 | MsG0280010814.01.T01:CDS | 40.0% | |
CCCACCGTAAGTAATAAACT+GGG | - | Chr2:75372385-75372404 | None:intergenic | 40.0% | |
CCCAGTTTATTACTTACGGT+GGG | + | Chr2:75372382-75372401 | MsG0280010814.01.T01:intron | 40.0% | |
CCCCTTCAATGATAAAATGG+AGG | - | Chr2:75372684-75372703 | None:intergenic | 40.0% | |
CTCTCACAAGGTTCAATATC+TGG | - | Chr2:75372029-75372048 | None:intergenic | 40.0% | |
GAAGGAGCTTGAATCTAAAG+AGG | + | Chr2:75370882-75370901 | MsG0280010814.01.T01:CDS | 40.0% | |
GAGTGCAAATAGGAATGGTA+GGG | - | Chr2:75372346-75372365 | None:intergenic | 40.0% | |
GCCATTGATAGAACAAGCTA+AGG | + | Chr2:75370445-75370464 | MsG0280010814.01.T01:CDS | 40.0% | |
GGGTATGTGTGAAAATGGAA+TGG | - | Chr2:75373210-75373229 | None:intergenic | 40.0% | |
GTTACTGTGTACTTGAACTC+AGG | + | Chr2:75373254-75373273 | MsG0280010814.01.T01:intron | 40.0% | |
GTTGTTCCAGCAGATAGATT+TGG | - | Chr2:75371992-75372011 | None:intergenic | 40.0% | |
TACCATTCCTATTTGCACTC+AGG | + | Chr2:75372346-75372365 | MsG0280010814.01.T01:intron | 40.0% | |
TAGATTCAAGCTCCTTCACT+CGG | - | Chr2:75370879-75370898 | None:intergenic | 40.0% | |
TAGATTCCAGTTCCTTCAGT+TGG | - | Chr2:75370754-75370773 | None:intergenic | 40.0% | |
TCAAAAGAGAGAGGATTCGA+AGG | + | Chr2:75370728-75370747 | MsG0280010814.01.T01:intron | 40.0% | |
TCAAACCAGAGGGAATTTGA+AGG | + | Chr2:75370599-75370618 | MsG0280010814.01.T01:intron | 40.0% | |
TGAGTGCAAATAGGAATGGT+AGG | - | Chr2:75372347-75372366 | None:intergenic | 40.0% | |
TTTAGATTCCACTCCTTCAC+TGG | - | Chr2:75370501-75370520 | None:intergenic | 40.0% | |
! | GAAGGGCATAAAATCAATGG+AGG | + | Chr2:75371089-75371108 | MsG0280010814.01.T01:CDS | 40.0% |
! | GGTTTTGCAAACAGAGTTTC+TGG | + | Chr2:75372245-75372264 | MsG0280010814.01.T01:CDS | 40.0% |
! | TCTTCAATTGGCCTACAAGT+TGG | - | Chr2:75370571-75370590 | None:intergenic | 40.0% |
! | TGCAAGGGTATGTGTGAAAA+TGG | - | Chr2:75373215-75373234 | None:intergenic | 40.0% |
!! | TTTGACCCTCTGGAATTATG+GGG | - | Chr2:75371941-75371960 | None:intergenic | 40.0% |
!!! | CTTTTGACCCTCTGGAATTA+TGG | - | Chr2:75371943-75371962 | None:intergenic | 40.0% |
!!! | GGAGTTGAGTCACTTTTCAA+CGG | + | Chr2:75371852-75371871 | MsG0280010814.01.T01:CDS | 40.0% |
AAAATTGCCGTGGAGCTGTT+TGG | + | Chr2:75372215-75372234 | MsG0280010814.01.T01:CDS | 45.0% | |
AAGTCAAGGATCCTGTGTCA+AGG | + | Chr2:75371273-75371292 | MsG0280010814.01.T01:intron | 45.0% | |
ACCTCATCCTGAGTGCAAAT+AGG | - | Chr2:75372356-75372375 | None:intergenic | 45.0% | |
ACTGAACCCCATAATTCCAG+AGG | + | Chr2:75371932-75371951 | MsG0280010814.01.T01:CDS | 45.0% | |
CGAAGCAGCTGGAATCTAAA+AGG | + | Chr2:75370627-75370646 | MsG0280010814.01.T01:intron | 45.0% | |
CTGAACCCCATAATTCCAGA+GGG | + | Chr2:75371933-75371952 | MsG0280010814.01.T01:CDS | 45.0% | |
GATCATTCAAGTCGTGCCTT+TGG | + | Chr2:75371789-75371808 | MsG0280010814.01.T01:CDS | 45.0% | |
GCATTTCGAAAGCCAAGTTG+AGG | + | Chr2:75371133-75371152 | MsG0280010814.01.T01:CDS | 45.0% | |
GGGCATAAAATCAATGGAGG+AGG | + | Chr2:75371092-75371111 | MsG0280010814.01.T01:CDS | 45.0% | |
GTGGTTTGAAGGACAAGTCA+AGG | + | Chr2:75371259-75371278 | MsG0280010814.01.T01:intron | 45.0% | |
GTGTACTTGAACTCAGGATC+AGG | + | Chr2:75373260-75373279 | MsG0280010814.01.T01:intron | 45.0% | |
TACTTACGGTGGGTGATGTT+TGG | + | Chr2:75372392-75372411 | MsG0280010814.01.T01:intron | 45.0% | |
TAGACTGTAACTCCTTCCCT+TGG | - | Chr2:75370541-75370560 | None:intergenic | 45.0% | |
TCCTATTTGCACTCAGGATG+AGG | + | Chr2:75372352-75372371 | MsG0280010814.01.T01:intron | 45.0% | |
! | AGCAACTTGATAGCCAGTGA+AGG | + | Chr2:75370485-75370504 | MsG0280010814.01.T01:CDS | 45.0% |
! | GCAATTTTGTGCAGAGCAAC+AGG | - | Chr2:75372203-75372222 | None:intergenic | 45.0% |
! | GGGGCACTTAATAGTCCTAT+TGG | + | Chr2:75371586-75371605 | MsG0280010814.01.T01:intron | 45.0% |
! | TTATCTCCCTTTTGACCCTC+TGG | - | Chr2:75371951-75371970 | None:intergenic | 45.0% |
ACTTCTTGAAGGCCGAGTGA+AGG | + | Chr2:75370697-75370716 | MsG0280010814.01.T01:intron | 50.0% | |
AGGATTCGAAGGCCAACTGA+AGG | + | Chr2:75370739-75370758 | MsG0280010814.01.T01:intron | 50.0% | |
ATCTGCGGGTCTGCTTCATA+AGG | + | Chr2:75373347-75373366 | MsG0280010814.01.T01:CDS | 50.0% | |
CATTCAAGTCGTGCCTTTGG+TGG | + | Chr2:75371792-75371811 | MsG0280010814.01.T01:CDS | 50.0% | |
GACAACAGCCTAGAATCTGC+GGG | + | Chr2:75373333-75373352 | MsG0280010814.01.T01:CDS | 50.0% | |
GCTGTTTGAAAGCCAAGGGA+AGG | + | Chr2:75370526-75370545 | MsG0280010814.01.T01:CDS | 50.0% | |
GGACAACAGCCTAGAATCTG+CGG | + | Chr2:75373332-75373351 | MsG0280010814.01.T01:CDS | 50.0% | |
GGCGCAAGCAAGAAAACTGA+TGG | + | Chr2:75371831-75371850 | MsG0280010814.01.T01:CDS | 50.0% | |
TAGATTCCAGCTGCTTCGCT+TGG | - | Chr2:75370625-75370644 | None:intergenic | 50.0% | |
TGCTCTGCACAAAATTGCCG+TGG | + | Chr2:75372205-75372224 | MsG0280010814.01.T01:CDS | 50.0% | |
! | CTTGATAGCCAGTGAAGGAG+TGG | + | Chr2:75370490-75370509 | MsG0280010814.01.T01:CDS | 50.0% |
! | CTTGGCCTTCAAATTCCCTC+TGG | - | Chr2:75370607-75370626 | None:intergenic | 50.0% |
!! | GCATTTTGATGGCCGAGTGA+AGG | + | Chr2:75370864-75370883 | MsG0280010814.01.T01:CDS | 50.0% |
CAGGCATCCAAACAGCTCCA+CGG | - | Chr2:75372225-75372244 | None:intergenic | 55.0% | |
CGAAGGCCAACTGAAGGAAC+TGG | + | Chr2:75370745-75370764 | MsG0280010814.01.T01:intron | 55.0% | |
GAAGCAGACCCGCAGATTCT+AGG | - | Chr2:75373344-75373363 | None:intergenic | 55.0% | |
GTGGAGCTGTTTGGATGCCT+GGG | + | Chr2:75372224-75372243 | MsG0280010814.01.T01:CDS | 55.0% | |
CGTGGAGCTGTTTGGATGCC+TGG | + | Chr2:75372223-75372242 | MsG0280010814.01.T01:CDS | 60.0% | |
TGAAGGCCAAGCGAAGCAGC+TGG | + | Chr2:75370616-75370635 | MsG0280010814.01.T01:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 75370416 | 75373530 | 75370416 | ID=MsG0280010814.01;Name=MsG0280010814.01 |
Chr2 | mRNA | 75370416 | 75373530 | 75370416 | ID=MsG0280010814.01.T01;Parent=MsG0280010814.01;Name=MsG0280010814.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0.5|0.6|1|1|1|5|114|463 |
Chr2 | exon | 75370416 | 75370591 | 75370416 | ID=MsG0280010814.01.T01:exon:11630;Parent=MsG0280010814.01.T01 |
Chr2 | exon | 75370798 | 75371204 | 75370798 | ID=MsG0280010814.01.T01:exon:11631;Parent=MsG0280010814.01.T01 |
Chr2 | exon | 75371772 | 75372266 | 75371772 | ID=MsG0280010814.01.T01:exon:11632;Parent=MsG0280010814.01.T01 |
Chr2 | exon | 75372991 | 75373163 | 75372991 | ID=MsG0280010814.01.T01:exon:11633;Parent=MsG0280010814.01.T01 |
Chr2 | exon | 75373276 | 75373530 | 75373276 | ID=MsG0280010814.01.T01:exon:11634;Parent=MsG0280010814.01.T01 |
Chr2 | CDS | 75370416 | 75370591 | 75370416 | ID=MsG0280010814.01.T01:cds;Parent=MsG0280010814.01.T01 |
Chr2 | CDS | 75370798 | 75371204 | 75370798 | ID=MsG0280010814.01.T01:cds;Parent=MsG0280010814.01.T01 |
Chr2 | CDS | 75371772 | 75372266 | 75371772 | ID=MsG0280010814.01.T01:cds;Parent=MsG0280010814.01.T01 |
Chr2 | CDS | 75372991 | 75373163 | 75372991 | ID=MsG0280010814.01.T01:cds;Parent=MsG0280010814.01.T01 |
Chr2 | CDS | 75373276 | 75373416 | 75373276 | ID=MsG0280010814.01.T01:cds;Parent=MsG0280010814.01.T01 |
Chr2 | three_prime_UTR | 75373417 | 75373530 | 75373417 | ID=MsG0280010814.01.T01:three_prime_utr;Parent=MsG0280010814.01.T01 |
Gene Sequence |
Protein sequence |