AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011175.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011175.01.T01 MTR_2g100130 66.306 555 47 7 1 460 1 510 0.0 676
MsG0280011175.01.T01 MTR_2g100130 64.685 555 46 8 1 460 1 500 0.0 652
MsG0280011175.01.T01 MTR_2g100130 65.112 536 47 7 1 441 1 491 0.0 636
MsG0280011175.01.T01 MTR_2g100130 65.112 536 46 8 1 441 1 490 0.0 631
MsG0280011175.01.T01 MTR_2g100130 74.272 412 13 2 142 460 60 471 0.0 591
MsG0280011175.01.T01 MTR_2g100130 63.601 511 46 7 1 416 1 466 0.0 585
MsG0280011175.01.T01 MTR_2g100130 73.815 401 12 2 153 460 1 401 0.0 575
MsG0280011175.01.T01 MTR_2g100130 73.028 393 12 3 142 441 60 451 0.0 545
MsG0280011175.01.T01 MTR_3g452710 75.000 328 40 1 175 460 155 482 9.02e-178 506
MsG0280011175.01.T01 MTR_3g452710 70.474 359 60 3 145 460 194 549 4.67e-177 507
MsG0280011175.01.T01 MTR_2g100160 74.618 327 40 1 176 459 93 419 2.31e-172 490
MsG0280011175.01.T01 MTR_7g116380 36.694 248 108 4 220 424 38 279 7.57e-47 165
MsG0280011175.01.T01 MTR_7g116380 36.694 248 108 4 220 424 38 279 7.68e-47 164
MsG0280011175.01.T01 MTR_5g081230 32.982 285 137 5 188 424 18 296 2.39e-46 163
MsG0280011175.01.T01 MTR_1g074880 33.333 288 139 5 204 448 22 299 7.47e-46 162
MsG0280011175.01.T01 MTR_1g074880 33.333 288 139 5 204 448 22 299 1.05e-45 162
MsG0280011175.01.T01 MTR_1g079950 35.081 248 112 4 220 424 38 279 1.31e-45 161
MsG0280011175.01.T01 MTR_1g079950 35.081 248 112 4 220 424 38 279 1.34e-45 161
MsG0280011175.01.T01 MTR_1g079950 35.081 248 112 4 220 424 38 279 1.35e-45 162
MsG0280011175.01.T01 MTR_1g079950 35.081 248 112 4 220 424 67 308 1.94e-45 162
MsG0280011175.01.T01 MTR_8g098980 32.492 317 156 7 189 457 4 310 4.36e-45 160
MsG0280011175.01.T01 MTR_7g112870 32.143 280 140 5 189 424 8 281 1.02e-44 159
MsG0280011175.01.T01 MTR_8g005010 34.137 249 115 4 219 424 35 277 2.05e-44 157
MsG0280011175.01.T01 MTR_1g043240 32.955 264 128 4 204 424 22 279 2.85e-43 155
MsG0280011175.01.T01 MTR_1g074880 35.628 247 110 4 245 448 4 244 2.68e-42 151
MsG0280011175.01.T01 MTR_1g074880 35.628 247 110 4 245 448 4 244 3.17e-42 151
MsG0280011175.01.T01 MTR_1g079950 36.937 222 95 3 246 424 34 253 3.24e-41 149
MsG0280011175.01.T01 MTR_8g062430 34.413 247 114 6 241 443 49 291 4.41e-37 138
MsG0280011175.01.T01 MTR_5g037200 34.008 247 115 6 241 443 49 291 6.19e-37 137
MsG0280011175.01.T01 MTR_7g107310 30.392 306 151 9 195 446 7 304 3.37e-35 133
MsG0280011175.01.T01 MTR_1g039380 34.252 254 117 6 217 426 1 248 3.49e-35 132
MsG0280011175.01.T01 MTR_8g085610 33.597 253 117 7 241 446 27 275 5.13e-35 132
MsG0280011175.01.T01 MTR_8g085610 33.597 253 117 7 241 446 51 299 8.60e-35 132
MsG0280011175.01.T01 MTR_5g093990 29.693 293 155 6 195 443 4 289 9.19e-35 132
MsG0280011175.01.T01 MTR_1g039380 35.745 235 105 5 236 426 40 272 1.70e-34 131
MsG0280011175.01.T01 MTR_5g037200 44.286 140 73 4 241 378 49 185 2.17e-30 117
MsG0280011175.01.T01 MTR_2g087530 29.391 279 134 6 203 424 546 818 1.38e-29 122
MsG0280011175.01.T01 MTR_2g087530 29.391 279 134 6 203 424 659 931 2.97e-29 122
MsG0280011175.01.T01 MTR_4g050540 29.391 279 134 6 203 424 664 936 6.73e-29 120
MsG0280011175.01.T01 MTR_1g089370 29.889 271 131 6 208 423 548 814 4.73e-28 118
MsG0280011175.01.T01 MTR_8g072600 44.715 123 65 1 241 360 131 253 1.41e-27 113
MsG0280011175.01.T01 MTR_2g036980 84.848 66 9 1 1 66 1 65 9.20e-27 111
MsG0280011175.01.T01 MTR_8g072600 44.715 123 65 1 241 360 131 253 1.38e-26 112
MsG0280011175.01.T01 MTR_2g099710 27.451 306 128 10 223 448 221 512 9.39e-24 104
MsG0280011175.01.T01 MTR_5g037520 75.758 66 15 1 1 66 1 65 1.90e-19 90.9
MsG0280011175.01.T01 MTR_5g048020 44.706 85 45 1 53 137 54 136 3.50e-19 85.1
MsG0280011175.01.T01 MTR_5g036810 42.353 85 45 1 73 153 226 310 5.67e-16 79.0
MsG0280011175.01.T01 MTR_4g459430 39.726 73 44 0 73 145 240 312 8.25e-16 79.0
MsG0280011175.01.T01 MTR_4g059530 39.726 73 44 0 73 145 240 312 8.25e-16 79.0
MsG0280011175.01.T01 MTR_3g112330 48.438 64 33 0 76 139 29 92 1.31e-15 75.5
MsG0280011175.01.T01 MTR_1g100385 53.333 60 28 0 72 131 282 341 2.75e-15 78.2
MsG0280011175.01.T01 MTR_5g007390 41.026 78 45 1 75 151 2 79 5.72e-14 68.9
MsG0280011175.01.T01 MTR_8g077330 47.761 67 35 0 73 139 46 112 1.61e-13 69.7
MsG0280011175.01.T01 MTR_3g070320 55.319 47 21 0 93 139 1 47 1.66e-12 66.2
MsG0280011175.01.T01 MTR_1g015073 48.485 66 34 0 74 139 13 78 2.54e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011175.01.T01 AT2G42810 70.122 328 56 1 175 460 157 484 9.31e-168 481
MsG0280011175.01.T01 AT2G42810 70.122 328 56 1 175 460 157 484 9.31e-168 481
MsG0280011175.01.T01 AT2G42810 70.122 328 56 1 175 460 157 484 9.31e-168 481
MsG0280011175.01.T01 AT2G42810 70.122 328 56 1 175 460 210 537 7.41e-167 481
MsG0280011175.01.T01 AT2G42810 70.336 327 55 1 176 460 212 538 1.15e-166 480
MsG0280011175.01.T01 AT3G46820 33.217 286 136 5 188 424 10 289 4.46e-47 165
MsG0280011175.01.T01 AT2G29400 34.733 262 123 4 208 427 43 298 6.41e-47 165
MsG0280011175.01.T01 AT5G59160 30.968 310 155 6 188 448 10 309 1.06e-46 164
MsG0280011175.01.T01 AT5G59160 30.968 310 155 6 188 448 10 309 1.06e-46 164
MsG0280011175.01.T01 AT5G59160 30.968 310 155 6 188 448 10 309 1.06e-46 164
MsG0280011175.01.T01 AT5G27840 35.178 253 115 4 215 424 39 285 9.53e-46 162
MsG0280011175.01.T01 AT5G27840 35.178 253 115 4 215 424 39 285 9.56e-46 162
MsG0280011175.01.T01 AT5G27840 35.178 253 115 4 215 424 39 285 1.09e-45 162
MsG0280011175.01.T01 AT5G27840 35.178 253 115 4 215 424 39 285 1.09e-45 162
MsG0280011175.01.T01 AT3G05580 33.212 274 129 6 215 444 39 302 1.96e-44 158
MsG0280011175.01.T01 AT2G39840 32.632 285 138 5 188 424 15 293 2.85e-44 158
MsG0280011175.01.T01 AT5G43380 34.677 248 113 4 220 424 38 279 1.01e-43 156
MsG0280011175.01.T01 AT5G43380 34.677 248 113 4 220 424 38 279 1.14e-43 156
MsG0280011175.01.T01 AT5G43380 34.677 248 113 4 220 424 38 279 1.23e-43 156
MsG0280011175.01.T01 AT4G11240 35.178 253 115 4 215 424 34 280 1.78e-43 155
MsG0280011175.01.T01 AT1G64040 32.042 284 140 5 188 424 3 280 8.75e-42 151
MsG0280011175.01.T01 AT3G05580 40.351 171 96 3 215 385 39 203 3.04e-39 142
MsG0280011175.01.T01 AT1G10430 31.399 293 149 7 195 443 7 291 7.93e-38 140
MsG0280011175.01.T01 AT1G10430 31.399 293 149 7 195 443 7 291 7.93e-38 140
MsG0280011175.01.T01 AT1G59830 34.818 247 113 6 241 443 49 291 2.47e-37 139
MsG0280011175.01.T01 AT1G69960 31.058 293 150 7 195 443 8 292 5.19e-37 138
MsG0280011175.01.T01 AT2G42500 31.148 305 152 9 189 446 11 304 5.95e-37 138
MsG0280011175.01.T01 AT4G26720 29.000 300 162 6 195 450 4 296 5.05e-36 135
MsG0280011175.01.T01 AT5G55260 29.333 300 161 6 195 450 4 296 5.37e-36 135
MsG0280011175.01.T01 AT3G58500 30.363 303 155 9 191 446 11 304 5.14e-35 132
MsG0280011175.01.T01 AT1G50370 35.745 235 105 5 236 426 40 272 2.23e-34 130
MsG0280011175.01.T01 AT3G19980 35.319 235 106 5 236 426 40 272 6.29e-34 129
MsG0280011175.01.T01 AT1G03445 30.450 289 132 7 219 450 487 763 8.23e-33 132
MsG0280011175.01.T01 AT1G03445 30.450 289 132 7 219 450 487 763 1.02e-32 132
MsG0280011175.01.T01 AT1G59830 38.421 190 108 5 195 382 7 189 1.98e-31 121
MsG0280011175.01.T01 AT5G63870 42.742 124 68 1 240 360 78 201 1.38e-29 117
MsG0280011175.01.T01 AT5G55260 26.393 341 159 8 195 450 4 337 2.09e-29 118
MsG0280011175.01.T01 AT5G63870 42.742 124 68 1 240 360 78 201 2.29e-28 116
MsG0280011175.01.T01 AT5G63870 42.742 124 68 1 240 360 78 201 2.29e-28 116
MsG0280011175.01.T01 AT2G27210 29.032 279 135 6 203 424 670 942 6.07e-27 115
MsG0280011175.01.T01 AT2G27210 29.032 279 135 6 203 424 665 937 6.33e-27 115
MsG0280011175.01.T01 AT4G03080 32.365 241 104 6 241 424 579 817 6.50e-27 114
MsG0280011175.01.T01 AT2G42500 30.645 248 122 6 246 446 13 257 1.08e-26 108
MsG0280011175.01.T01 AT1G08420 29.032 279 135 6 203 424 681 953 2.11e-26 113
MsG0280011175.01.T01 AT1G08420 29.032 279 135 6 203 424 676 948 2.27e-26 113
MsG0280011175.01.T01 AT1G48120 37.576 165 99 2 214 375 629 792 5.10e-25 109
MsG0280011175.01.T01 AT2G42500 41.026 117 66 2 236 349 51 167 2.44e-22 94.4
MsG0280011175.01.T01 AT2G42500 42.478 113 62 2 236 345 51 163 3.32e-22 93.6
MsG0280011175.01.T01 AT5G10900 37.209 129 78 1 240 365 224 352 3.74e-22 100
MsG0280011175.01.T01 AT5G10900 37.209 129 78 1 240 365 224 352 3.83e-22 99.8
MsG0280011175.01.T01 AT5G10900 37.209 129 78 1 240 365 224 352 4.23e-22 99.8
MsG0280011175.01.T01 AT2G42500 42.478 113 62 2 236 345 51 163 4.37e-22 93.6

Find 118 sgRNAs with CRISPR-Local

Find 469 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAGGGATTATGGCTTATT+TGG 0.134067 2:+80548268 MsG0280011175.01.T01:CDS
TGCTTACTTTACAGCGTATT+TGG 0.182133 2:+80554082 MsG0280011175.01.T01:three_prime_UTR
TCAATCATTGGCAGCTCTTC+TGG 0.184153 2:-80553935 None:intergenic
GCTCATTCACACTGGATTAA+AGG 0.198054 2:+80549648 MsG0280011175.01.T01:CDS
GTTACCTGATCACAGTAATT+TGG 0.220828 2:-80553123 None:intergenic
AGAAAGCTCTTAAGGGATTA+TGG 0.243593 2:+80548259 MsG0280011175.01.T01:CDS
TTAAGCACAAGGGAAATATT+TGG 0.244278 2:+80553975 MsG0280011175.01.T01:three_prime_UTR
CTCCTAATTTGTTGATTCAT+TGG 0.256647 2:+80548208 MsG0280011175.01.T01:CDS
AGATGTCGAGCCACGGTATT+CGG 0.257986 2:+80550499 MsG0280011175.01.T01:intron
AAGAGCATGAACAAGATATT+TGG 0.260261 2:+80552522 MsG0280011175.01.T01:CDS
GAAAATCCATATCTATTTAA+TGG 0.277620 2:+80551906 MsG0280011175.01.T01:CDS
TCCTAATTTGTTGATTCATT+GGG 0.281890 2:+80548209 MsG0280011175.01.T01:CDS
TCCCAATGAATCAACAAATT+AGG 0.318710 2:-80548210 None:intergenic
ATATGGAAGATGATGGAATT+TGG 0.322793 2:-80554229 None:intergenic
GCTTCAAATGTAATAATGTT+AGG 0.325705 2:-80553358 None:intergenic
TCATTGGGATTGTTGGGGTA+TGG 0.330705 2:+80548224 MsG0280011175.01.T01:CDS
GGGCAGAGGCATTGTGTTGC+CGG 0.333404 2:-80547473 None:intergenic
GATGTCGAGCCACGGTATTC+GGG 0.336263 2:+80550500 MsG0280011175.01.T01:intron
AAGGAATAAGAAAGCTCTTA+AGG 0.337886 2:+80548251 MsG0280011175.01.T01:CDS
CTCAAATCCGATCAATTAAT+CGG 0.338994 2:+80552694 MsG0280011175.01.T01:CDS
ATATTTGGCTAGAGAAGATT+TGG 0.340335 2:+80553990 MsG0280011175.01.T01:three_prime_UTR
GTTGATTCATTGGGATTGTT+GGG 0.345956 2:+80548218 MsG0280011175.01.T01:CDS
AGAAGGAGATACTATTACTT+TGG 0.348174 2:+80550532 MsG0280011175.01.T01:CDS
TGACCCCATCAACACTAAAA+AGG 0.352827 2:-80552665 None:intergenic
TTTCAACATTTGATCCGTTT+GGG 0.355054 2:+80547389 MsG0280011175.01.T01:five_prime_UTR
AGCAAACATCTTGGAAACCT+TGG 0.372120 2:-80547573 None:intergenic
TGTTGATTCATTGGGATTGT+TGG 0.380505 2:+80548217 MsG0280011175.01.T01:CDS
CACATAGTGATGGTTGTAAT+AGG 0.384920 2:+80549594 MsG0280011175.01.T01:CDS
CCTCTGCCCTTGGCCTTGCT+TGG 0.391689 2:+80547487 MsG0280011175.01.T01:CDS
AGTATTCAACTGTTTACCTT+TGG 0.392464 2:+80552602 MsG0280011175.01.T01:CDS
ATAATGTTAGGTTGCAAATC+AGG 0.399962 2:-80553346 None:intergenic
TCACCTTTGAAACAAGGTTT+AGG 0.402886 2:-80547641 None:intergenic
TTCAAAACAGCATCAATCAT+TGG 0.405737 2:-80553947 None:intergenic
AAGTCACCATTAAATAGATA+TGG 0.408912 2:-80551912 None:intergenic
AATGGTGACTTTGTAGATAG+AGG 0.410819 2:+80551924 MsG0280011175.01.T01:CDS
TGCTCCAAATTACTGTGATC+AGG 0.411289 2:+80553119 MsG0280011175.01.T01:CDS
CAAATTTGTCAAAATGTTTG+CGG 0.411891 2:+80552578 MsG0280011175.01.T01:CDS
CATCTTCCATATAACAAAAT+CGG 0.415509 2:+80554240 MsG0280011175.01.T01:three_prime_UTR
GAAAATGATGAATGATTTCA+AGG 0.418810 2:+80550565 MsG0280011175.01.T01:CDS
CAACACAATGCCTCTGCCCT+TGG 0.423197 2:+80547477 MsG0280011175.01.T01:CDS
GCGAGGTCACTAGCTTGATA+TGG 0.424900 2:+80548145 MsG0280011175.01.T01:CDS
CCAAGTTGCTATGTCTTCTC+CGG 0.428094 2:+80547454 MsG0280011175.01.T01:exon
AGGTGCTTCAAATCGAATAA+AGG 0.429933 2:-80553326 None:intergenic
TTATGTGTCTTACCTTCATC+AGG 0.430537 2:-80552729 None:intergenic
TAAGCCATTGGCTTAACATC+AGG 0.430731 2:-80553853 None:intergenic
TATGGCAAAAGGTAATGAAT+TGG 0.431886 2:+80548163 MsG0280011175.01.T01:CDS
GTGATGGTTGTAATAGGATC+TGG 0.445017 2:+80549600 MsG0280011175.01.T01:CDS
CCAAGCAAGGCCAAGGGCAG+AGG 0.446808 2:-80547487 None:intergenic
GGAAAACATGTTACTGTTTG+TGG 0.453376 2:+80550789 MsG0280011175.01.T01:CDS
TTGGGATTGTTGGGGTATGG+AGG 0.457158 2:+80548227 MsG0280011175.01.T01:CDS
TATTCGGGATCAAGAATAGA+AGG 0.467809 2:+80550515 MsG0280011175.01.T01:CDS
CACTAGCTTGATATGGCAAA+AGG 0.468451 2:+80548152 MsG0280011175.01.T01:CDS
AGCTAGTGACCTCGCAATGA+AGG 0.470787 2:-80548137 None:intergenic
CACAAAACCGATTAATTGAT+CGG 0.472508 2:-80552701 None:intergenic
TGGGATTGTTGGGGTATGGA+GGG 0.486304 2:+80548228 MsG0280011175.01.T01:CDS
CAAGGCTTGAGCAAACATCT+TGG 0.488578 2:-80547582 None:intergenic
GAACAGAAGTGCTTGGATAG+AGG 0.488821 2:+80550587 MsG0280011175.01.T01:CDS
TGGAGTGTTGTCATTGGCAT+TGG 0.496570 2:+80549620 MsG0280011175.01.T01:CDS
GGTTTAGGTAGCTGTGATGC+AGG 0.502133 2:-80547626 None:intergenic
CTGCGAGTTGAGACAGACTT+TGG 0.502711 2:-80547521 None:intergenic
AGGAATAAGAAAGCTCTTAA+GGG 0.503898 2:+80548252 MsG0280011175.01.T01:CDS
CTACCTAAACCTTGTTTCAA+AGG 0.504184 2:+80547638 MsG0280011175.01.T01:CDS
GATGCGACCAAGCAAGGCCA+AGG 0.507282 2:-80547494 None:intergenic
GTATTGATTATGAGAACAAT+CGG 0.508663 2:-80553891 None:intergenic
AGGATCTGGAGTGTTGTCAT+TGG 0.509319 2:+80549614 MsG0280011175.01.T01:CDS
TTTAAGTGCATGTCTCCATC+TGG 0.511692 2:+80551984 MsG0280011175.01.T01:CDS
ATTGTTGGGGTATGGAGGGA+AGG 0.517305 2:+80548232 MsG0280011175.01.T01:CDS
AACAGAAGTGCTTGGATAGA+GGG 0.518754 2:+80550588 MsG0280011175.01.T01:CDS
CATTATTACATTTGAAGCAG+TGG 0.519521 2:+80553363 MsG0280011175.01.T01:CDS
TTTCAAGGAACAGAAGTGCT+TGG 0.526048 2:+80550580 MsG0280011175.01.T01:CDS
GGTGTAGATGCGACCAAGCA+AGG 0.526293 2:-80547500 None:intergenic
CACGGTTGCATCACAATCCA+AGG 0.528754 2:+80547556 MsG0280011175.01.T01:CDS
TGTTTCAATCTATATGAGAA+TGG 0.532481 2:-80554134 None:intergenic
TGAAGGAACGTTGTTAATTG+TGG 0.534020 2:+80549566 MsG0280011175.01.T01:CDS
GAAGGAACGTTGTTAATTGT+GGG 0.537165 2:+80549567 MsG0280011175.01.T01:CDS
CAAAATCACGACTGTCTCGA+CGG 0.538865 2:-80547341 None:intergenic
ATACTACTGTGTGGGTGGTA+TGG 0.542304 2:+80548292 MsG0280011175.01.T01:CDS
TTGAAAACCAACAGCAAACC+CGG 0.544624 2:-80547372 None:intergenic
AAGTTGTTTGCATAAGCCAT+TGG 0.545433 2:-80553865 None:intergenic
GCAAAAGGTAATGAATTGGA+TGG 0.548986 2:+80548167 MsG0280011175.01.T01:CDS
TGGCTATTGCTCATTCACAC+TGG 0.550642 2:+80549640 MsG0280011175.01.T01:CDS
TTGTGGCGATGTGCATGGTC+AGG 0.553831 2:+80550806 MsG0280011175.01.T01:CDS
CAACATTTGATCCGTTTGGG+TGG 0.553891 2:+80547392 MsG0280011175.01.T01:five_prime_UTR
TTGCGTTCCGGGTTTGCTGT+TGG 0.558481 2:+80547365 MsG0280011175.01.T01:five_prime_UTR
CCGGAGAAGACATAGCAACT+TGG 0.561468 2:-80547454 None:intergenic
TTGTTTATCACATGAGCCAA+AGG 0.562219 2:-80552618 None:intergenic
TTGATTCATTGGGATTGTTG+GGG 0.562541 2:+80548219 MsG0280011175.01.T01:CDS
TTAAGGATTGGTCGAGAGGA+AGG 0.566552 2:+80548092 MsG0280011175.01.T01:intron
ATTTCCTCTAGCTATATACA+TGG 0.570325 2:-80552490 None:intergenic
ACAGTTATGTCAACAAGAGA+AGG 0.573846 2:-80550759 None:intergenic
GTAACAAGATGCCACCCAAA+CGG 0.575789 2:-80547403 None:intergenic
ACCCTTAAGGATTGGTCGAG+AGG 0.576617 2:+80548088 MsG0280011175.01.T01:intron
CAATGAATCAACAAATTAGG+AGG 0.581280 2:-80548207 None:intergenic
GTTGACATAACTGTTCCTCA+TGG 0.581296 2:+80550768 MsG0280011175.01.T01:CDS
AAATAATTGAATGAGCATGA+AGG 0.582838 2:+80549549 MsG0280011175.01.T01:intron
CGCTAATAGATGTCGAGCCA+CGG 0.583396 2:+80550492 MsG0280011175.01.T01:intron
ATTTGCTCACCTTTGAAACA+AGG 0.585157 2:-80547647 None:intergenic
ACTGTTTGTGGCGATGTGCA+TGG 0.597060 2:+80550801 MsG0280011175.01.T01:CDS
ATCTCATAAATCAAAGCACA+AGG 0.599543 2:+80553053 MsG0280011175.01.T01:CDS
CTTGTTACAGATTGTTGTTG+CGG 0.603792 2:+80547418 MsG0280011175.01.T01:five_prime_UTR
ACACCCTGATGTTAAGCCAA+TGG 0.605052 2:+80553849 MsG0280011175.01.T01:CDS
AAGCCATTGGCTTAACATCA+GGG 0.608784 2:-80553852 None:intergenic
TATTTGGCATACTACTGTGT+GGG 0.615780 2:+80548284 MsG0280011175.01.T01:CDS
TTGGCATACTACTGTGTGGG+TGG 0.621519 2:+80548287 MsG0280011175.01.T01:CDS
TGTGTCTTACCTTCATCAGG+AGG 0.622526 2:-80552726 None:intergenic
TCAGCCATGTATATAGCTAG+AGG 0.623458 2:+80552486 MsG0280011175.01.T01:intron
ATTGGCTTAACATCAGGGTG+TGG 0.628926 2:-80553847 None:intergenic
TTTATGCAGAAGGGTAACAA+AGG 0.652175 2:+80553301 MsG0280011175.01.T01:intron
TTATTTGGCATACTACTGTG+TGG 0.652948 2:+80548283 MsG0280011175.01.T01:CDS
ATTCTTGATCCCGAATACCG+TGG 0.653339 2:-80550509 None:intergenic
ATGCGACCAAGCAAGGCCAA+GGG 0.673982 2:-80547493 None:intergenic
CTTGGATTGTGATGCAACCG+TGG 0.681407 2:-80547555 None:intergenic
GGTTATGAGATTCAACATGA+CGG 0.684432 2:+80553075 MsG0280011175.01.T01:CDS
ATTGCACGAGTTAAACAACA+AGG 0.687961 2:-80547600 None:intergenic
TTCTCATATAGATTGAAACA+CGG 0.693554 2:+80554137 MsG0280011175.01.T01:three_prime_UTR
TGTGGGTGCACACATAGTGA+TGG 0.702135 2:+80549584 MsG0280011175.01.T01:CDS
GTTACTATACAAAACAACAG+TGG 0.715204 2:-80554023 None:intergenic
TCTCATAAATCAAAGCACAA+GGG 0.729815 2:+80553054 MsG0280011175.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGTTTACAAATTAATTAT+TGG + Chr2:80547935-80547954 MsG0280011175.01.T01:intron 10.0%
!! TAGTTTACAAATTAATTATT+GGG + Chr2:80547936-80547955 MsG0280011175.01.T01:intron 10.0%
!!! AAATATTTTTAACCTTTAAA+TGG + Chr2:80548996-80549015 MsG0280011175.01.T01:intron 10.0%
!!! ATATTTTATTAAAATTTGTC+AGG - Chr2:80551607-80551626 None:intergenic 10.0%
!!! CTCTTATTTATAATTTAATT+AGG - Chr2:80549119-80549138 None:intergenic 10.0%
!!! TGTTAGTTAATATTTTATAT+GGG + Chr2:80551238-80551257 MsG0280011175.01.T01:intron 10.0%
!!! TTGTTAGTTAATATTTTATA+TGG + Chr2:80551237-80551256 MsG0280011175.01.T01:intron 10.0%
!!! TTTTTTCCAAATAATTAATA+CGG - Chr2:80552096-80552115 None:intergenic 10.0%
!! AAAAAAAAAACACTCTTATT+AGG + Chr2:80548792-80548811 MsG0280011175.01.T01:intron 15.0%
!! AATATGAAATTAGATAAGAA+AGG + Chr2:80550159-80550178 MsG0280011175.01.T01:intron 15.0%
!! ACTTGACTAAAAAAAAAAAT+GGG + Chr2:80551403-80551422 MsG0280011175.01.T01:intron 15.0%
!! ATATAAGAAAAAATCAATGA+TGG - Chr2:80550948-80550967 None:intergenic 15.0%
!! ATATGAAATTAGATAAGAAA+GGG + Chr2:80550160-80550179 MsG0280011175.01.T01:intron 15.0%
!! CATGAAAAATAAAATTGAAA+GGG - Chr2:80551824-80551843 None:intergenic 15.0%
!! GTATTAATTATTTGGAAAAA+AGG + Chr2:80552095-80552114 MsG0280011175.01.T01:intron 15.0%
!! TAAGATATTTAACCTTTAAA+TGG + Chr2:80549035-80549054 MsG0280011175.01.T01:intron 15.0%
!! TACTTGACTAAAAAAAAAAA+TGG + Chr2:80551402-80551421 MsG0280011175.01.T01:intron 15.0%
!! TATGAAAAACATAATAGTTA+TGG - Chr2:80549297-80549316 None:intergenic 15.0%
!! TCATGAAAAATAAAATTGAA+AGG - Chr2:80551825-80551844 None:intergenic 15.0%
!! TTAAAGGTTAAATATCTTAA+TGG - Chr2:80549034-80549053 None:intergenic 15.0%
!!! AAAATTTGTTTCTTTTATCT+TGG + Chr2:80547712-80547731 MsG0280011175.01.T01:intron 15.0%
!!! AACAAAATTTTTAATTGACT+TGG - Chr2:80549482-80549501 None:intergenic 15.0%
!!! AACTATTATGTTTTTCATAA+GGG + Chr2:80549298-80549317 MsG0280011175.01.T01:intron 15.0%
!!! AAGAAATAACAAAATTTTCA+AGG + Chr2:80548320-80548339 MsG0280011175.01.T01:intron 15.0%
!!! ATTTTAGAAACATATCTTAA+AGG - Chr2:80549073-80549092 None:intergenic 15.0%
!!! ATTTTTACTAAAAATGGTAA+AGG + Chr2:80551663-80551682 MsG0280011175.01.T01:intron 15.0%
!!! GTTAGTTAATATTTTATATG+GGG + Chr2:80551239-80551258 MsG0280011175.01.T01:intron 15.0%
!!! TAACTATTATGTTTTTCATA+AGG + Chr2:80549297-80549316 MsG0280011175.01.T01:intron 15.0%
!!! TAACTGTTAATTTGATTTTT+AGG + Chr2:80554042-80554061 MsG0280011175.01.T01:three_prime_UTR 15.0%
!!! TTCTTTCTTGAATAATTTTA+CGG + Chr2:80553167-80553186 MsG0280011175.01.T01:intron 15.0%
!!! TTTTTCCAAATAATTAATAC+GGG - Chr2:80552095-80552114 None:intergenic 15.0%
!!! TTTTTTCCTTAATTAGTTTA+TGG + Chr2:80547744-80547763 MsG0280011175.01.T01:intron 15.0%
!! AAAAATAAAATTGAAAGGGT+TGG - Chr2:80551820-80551839 None:intergenic 20.0%
!! AAATGGAAATAAATTCAACA+AGG - Chr2:80551759-80551778 None:intergenic 20.0%
!! AAGAATGTATAATATATGCA+GGG - Chr2:80551537-80551556 None:intergenic 20.0%
!! AATAAATTAAGCATCTAATC+AGG - Chr2:80552331-80552350 None:intergenic 20.0%
!! AATCAAATATCTCCATTTAA+AGG - Chr2:80549050-80549069 None:intergenic 20.0%
!! AATCATATATCTCCATTTAA+AGG - Chr2:80549011-80549030 None:intergenic 20.0%
!! ACATGTATAATCAGAATAAA+TGG - Chr2:80551776-80551795 None:intergenic 20.0%
!! AGATTACCATAAACTAATTA+AGG - Chr2:80547753-80547772 None:intergenic 20.0%
!! ATATCTTAATTCAATTTGTG+AGG + Chr2:80553766-80553785 MsG0280011175.01.T01:intron 20.0%
!! GAAAATCCATATCTATTTAA+TGG + Chr2:80551906-80551925 MsG0280011175.01.T01:CDS 20.0%
!! GTAAAATTATTCAAGAAAGA+AGG - Chr2:80553168-80553187 None:intergenic 20.0%
!! TCAAAAATCTCAAATGAATT+AGG - Chr2:80549975-80549994 None:intergenic 20.0%
!! TCTATAAACTATATGACTTA+CGG + Chr2:80552145-80552164 MsG0280011175.01.T01:intron 20.0%
!! TCTCAGAAAATGTATAAATA+TGG - Chr2:80551690-80551709 None:intergenic 20.0%
!! TTATAGAATAGCAAGATAAT+AGG - Chr2:80551053-80551072 None:intergenic 20.0%
!! TTATTCTGATTATACATGTT+TGG + Chr2:80551777-80551796 MsG0280011175.01.T01:intron 20.0%
!! TTCTTGAAGGATAATAATTT+AGG + Chr2:80552946-80552965 MsG0280011175.01.T01:intron 20.0%
!! TTTGTTTATGTATCTATGTT+TGG + Chr2:80552809-80552828 MsG0280011175.01.T01:intron 20.0%
!!! ATATTTTCTTTATTTGTTCG+CGG - Chr2:80550093-80550112 None:intergenic 20.0%
!!! GTTTTATTTTTGTTTTGTGA+TGG - Chr2:80550233-80550252 None:intergenic 20.0%
!!! TAATTAGTTTATGGTAATCT+TGG + Chr2:80547753-80547772 MsG0280011175.01.T01:intron 20.0%
!!! TACAATACAAAGAAGTATTA+AGG - Chr2:80552787-80552806 None:intergenic 20.0%
!!! TTAGATAAAGAGTGTTAATA+CGG - Chr2:80548832-80548851 None:intergenic 20.0%
!!! TTTTTTTTCTTCTTTCATTG+AGG + Chr2:80549214-80549233 MsG0280011175.01.T01:intron 20.0%
! AAAGTAAACGTTTGTGAAAT+CGG + Chr2:80549172-80549191 MsG0280011175.01.T01:intron 25.0%
! AAATAATTGAATGAGCATGA+AGG + Chr2:80549549-80549568 MsG0280011175.01.T01:intron 25.0%
! AAGTCACCATTAAATAGATA+TGG - Chr2:80551915-80551934 None:intergenic 25.0%
! AATTTCTTTGACCATTTATG+TGG + Chr2:80551159-80551178 MsG0280011175.01.T01:intron 25.0%
! ACCTAAAACCAATTAATCTA+AGG + Chr2:80549940-80549959 MsG0280011175.01.T01:intron 25.0%
! AGAATGTATAATATATGCAG+GGG - Chr2:80551536-80551555 None:intergenic 25.0%
! AGTCGTTGCATTAATAATAT+TGG + Chr2:80548761-80548780 MsG0280011175.01.T01:intron 25.0%
! ATAATGCATAATTTATGCAG+GGG + Chr2:80551315-80551334 MsG0280011175.01.T01:intron 25.0%
! ATATAATGAAACCTAAGAAG+AGG - Chr2:80552263-80552282 None:intergenic 25.0%
! ATCATTATCAGTAATGCATT+AGG + Chr2:80550010-80550029 MsG0280011175.01.T01:intron 25.0%
! CAAATTTGTCAAAATGTTTG+CGG + Chr2:80552578-80552597 MsG0280011175.01.T01:CDS 25.0%
! CATCTTCCATATAACAAAAT+CGG + Chr2:80554240-80554259 MsG0280011175.01.T01:three_prime_UTR 25.0%
! CTGCATAAATTATGCATTAT+GGG - Chr2:80551315-80551334 None:intergenic 25.0%
! GAAAATGATGAATGATTTCA+AGG + Chr2:80550565-80550584 MsG0280011175.01.T01:CDS 25.0%
! GAAGAATGTATAATATATGC+AGG - Chr2:80551538-80551557 None:intergenic 25.0%
! GCTTCAAATGTAATAATGTT+AGG - Chr2:80553361-80553380 None:intergenic 25.0%
! TAAAATTTGTCAGGAATAGA+AGG - Chr2:80551598-80551617 None:intergenic 25.0%
! TCAATCATCCTTAGATTAAT+TGG - Chr2:80549951-80549970 None:intergenic 25.0%
! TGAACACCGTTAAAATAATA+AGG - Chr2:80548936-80548955 None:intergenic 25.0%
! TGTTTCAATCTATATGAGAA+TGG - Chr2:80554137-80554156 None:intergenic 25.0%
! TTATATAGTAGCTACAATTG+TGG + Chr2:80549865-80549884 MsG0280011175.01.T01:intron 25.0%
! TTCTCATATAGATTGAAACA+CGG + Chr2:80554137-80554156 MsG0280011175.01.T01:three_prime_UTR 25.0%
! TTCTTTGTTACGTAGATATT+TGG + Chr2:80550902-80550921 MsG0280011175.01.T01:intron 25.0%
! TTGTATTTACAGTTGGAAAT+TGG + Chr2:80547842-80547861 MsG0280011175.01.T01:intron 25.0%
! TTTATTTACACTTTGATCAC+AGG + Chr2:80551009-80551028 MsG0280011175.01.T01:intron 25.0%
! TTTCGCAAATAATAAACCAA+GGG - Chr2:80550854-80550873 None:intergenic 25.0%
! TTTGATGTTGTATTTACAGT+TGG + Chr2:80547835-80547854 MsG0280011175.01.T01:intron 25.0%
!! AAACACTCTTATTAGGTTTT+TGG + Chr2:80548799-80548818 MsG0280011175.01.T01:intron 25.0%
!! AACCAAAATATTTTCATGTC+AGG - Chr2:80550463-80550482 None:intergenic 25.0%
!! AATTTAGGTATGTTTTCCAT+TGG + Chr2:80552961-80552980 MsG0280011175.01.T01:intron 25.0%
!! AGAATCAGTGTTGTTAAATA+TGG + Chr2:80553495-80553514 MsG0280011175.01.T01:intron 25.0%
!! GAACTCATACATTTTAAATG+CGG + Chr2:80551474-80551493 MsG0280011175.01.T01:intron 25.0%
!! GAATCAGTGTTGTTAAATAT+GGG + Chr2:80553496-80553515 MsG0280011175.01.T01:intron 25.0%
!! GATTTTGTTGCAAACAAAAA+AGG + Chr2:80550722-80550741 MsG0280011175.01.T01:CDS 25.0%
!! TACTTGATTTCTTATTTCAC+TGG + Chr2:80552989-80553008 MsG0280011175.01.T01:intron 25.0%
!! TAGAGAAATTTTATGCATGT+TGG + Chr2:80549795-80549814 MsG0280011175.01.T01:intron 25.0%
!! TTTTAATGTATATGCCCAAT+AGG + Chr2:80549696-80549715 MsG0280011175.01.T01:intron 25.0%
!! TTTTCGCAAATAATAAACCA+AGG - Chr2:80550855-80550874 None:intergenic 25.0%
!!! AACAAGATATTTGGTTTTGA+GGG + Chr2:80552531-80552550 MsG0280011175.01.T01:CDS 25.0%
!!! CTAAAGGTAGATCATTTTTT+TGG + Chr2:80551432-80551451 MsG0280011175.01.T01:intron 25.0%
!!! CTGTTTTTTTTAGTTATGTG+GGG + Chr2:80548664-80548683 MsG0280011175.01.T01:intron 25.0%
!!! GCTGTTTTTTTTAGTTATGT+GGG + Chr2:80548663-80548682 MsG0280011175.01.T01:intron 25.0%
!!! GTATTGATTATGAGAACAAT+CGG - Chr2:80553894-80553913 None:intergenic 25.0%
!!! TAACAAAATTTTCAAGGATG+AGG + Chr2:80548326-80548345 MsG0280011175.01.T01:intron 25.0%
!!! TAGATAAAGAGTGTTAATAC+GGG - Chr2:80548831-80548850 None:intergenic 25.0%
!!! TCAATAATGCTTATTTTGTG+TGG + Chr2:80552378-80552397 MsG0280011175.01.T01:intron 25.0%
!!! TCCTAATTTGTTGATTCATT+GGG + Chr2:80548209-80548228 MsG0280011175.01.T01:CDS 25.0%
!!! TCCTTAGATTAATTGGTTTT+AGG - Chr2:80549944-80549963 None:intergenic 25.0%
!!! TGAATATTTTTGAGCTCAAT+GGG + Chr2:80551871-80551890 MsG0280011175.01.T01:CDS 25.0%
!!! TGAGCTCCTTATTATTTTAA+CGG + Chr2:80548927-80548946 MsG0280011175.01.T01:intron 25.0%
!!! TGCTGTTTTTTTTAGTTATG+TGG + Chr2:80548662-80548681 MsG0280011175.01.T01:intron 25.0%
!!! TGTTTTTTTTAGTTATGTGG+GGG + Chr2:80548665-80548684 MsG0280011175.01.T01:intron 25.0%
!!! TTGAAAAGTTTTAAGCACAA+GGG + Chr2:80553965-80553984 MsG0280011175.01.T01:three_prime_UTR 25.0%
!!! TTGAATATTTTTGAGCTCAA+TGG + Chr2:80551870-80551889 MsG0280011175.01.T01:CDS 25.0%
!!! TTGACGATTAAGGTATTTTA+TGG - Chr2:80549737-80549756 None:intergenic 25.0%
!!! TTTAATTGACTTGGTGTATT+TGG - Chr2:80549473-80549492 None:intergenic 25.0%
!!! TTTGAAAAGTTTTAAGCACA+AGG + Chr2:80553964-80553983 MsG0280011175.01.T01:three_prime_UTR 25.0%
!!! TTTGATTTTTAGGATGCATT+TGG + Chr2:80554052-80554071 MsG0280011175.01.T01:three_prime_UTR 25.0%
!!! TTTTGTTATATGGAAGATGA+TGG - Chr2:80554239-80554258 None:intergenic 25.0%
!!! TTTTGTTTGCAACAAAATCT+TGG - Chr2:80550721-80550740 None:intergenic 25.0%
AAAAAATGGGTCAGATCTAA+AGG + Chr2:80551416-80551435 MsG0280011175.01.T01:intron 30.0%
AAATACAACATCAAACAGGT+TGG - Chr2:80547830-80547849 None:intergenic 30.0%
AAATGTATTTGCATTTGTCC+TGG + Chr2:80550674-80550693 MsG0280011175.01.T01:intron 30.0%
AAGAGACTAGACATTGTTTA+TGG + Chr2:80549134-80549153 MsG0280011175.01.T01:intron 30.0%
AAGGAATAAGAAAGCTCTTA+AGG + Chr2:80548251-80548270 MsG0280011175.01.T01:CDS 30.0%
AATTGTTGCTAGTAACTTCA+AGG + Chr2:80550876-80550895 MsG0280011175.01.T01:intron 30.0%
ACATTAATATCATAAGCGTG+TGG - Chr2:80553226-80553245 None:intergenic 30.0%
AGAAGGAGATACTATTACTT+TGG + Chr2:80550532-80550551 MsG0280011175.01.T01:CDS 30.0%
AGAGACTAGACATTGTTTAT+GGG + Chr2:80549135-80549154 MsG0280011175.01.T01:intron 30.0%
AGGAAAAAACTTGACGATTA+AGG - Chr2:80549747-80549766 None:intergenic 30.0%
AGGAATAAGAAAGCTCTTAA+GGG + Chr2:80548252-80548271 MsG0280011175.01.T01:CDS 30.0%
AGTAATGCATTAGGAAATAG+TGG + Chr2:80550019-80550038 MsG0280011175.01.T01:intron 30.0%
AGTATTCAACTGTTTACCTT+TGG + Chr2:80552602-80552621 MsG0280011175.01.T01:CDS 30.0%
ATACAAGAAAAACGATAGAG+CGG - Chr2:80548714-80548733 None:intergenic 30.0%
ATACGCAACAATCTTCTAAA+TGG - Chr2:80550423-80550442 None:intergenic 30.0%
ATATTTGGCTAGAGAAGATT+TGG + Chr2:80553990-80554009 MsG0280011175.01.T01:three_prime_UTR 30.0%
ATCAGGATATGTATACTTCA+TGG - Chr2:80553271-80553290 None:intergenic 30.0%
ATCTATGTTTGGTATGTGTA+GGG + Chr2:80552820-80552839 MsG0280011175.01.T01:intron 30.0%
ATCTCATAAATCAAAGCACA+AGG + Chr2:80553053-80553072 MsG0280011175.01.T01:CDS 30.0%
ATTTCCTCTAGCTATATACA+TGG - Chr2:80552493-80552512 None:intergenic 30.0%
CAATGAATCAACAAATTAGG+AGG - Chr2:80548210-80548229 None:intergenic 30.0%
CACAAAACCGATTAATTGAT+CGG - Chr2:80552704-80552723 None:intergenic 30.0%
CACAAGAAAAAATCCAAACA+AGG - Chr2:80550359-80550378 None:intergenic 30.0%
CCTGCATAAATTATGCATTA+TGG - Chr2:80551316-80551335 None:intergenic 30.0%
CTCAAATCCGATCAATTAAT+CGG + Chr2:80552694-80552713 MsG0280011175.01.T01:CDS 30.0%
CTGTAAATACAACATCAAAC+AGG - Chr2:80547834-80547853 None:intergenic 30.0%
GAAATCAAGTATCAAACCAA+TGG - Chr2:80552980-80552999 None:intergenic 30.0%
GAAGTCCCGTATTAATTATT+TGG + Chr2:80552087-80552106 MsG0280011175.01.T01:intron 30.0%
GCATAAAACAATGGAAAATC+AGG - Chr2:80553288-80553307 None:intergenic 30.0%
GCTAGAGAAATTTACCTTAA+AGG - Chr2:80551374-80551393 None:intergenic 30.0%
GTTACTATACAAAACAACAG+TGG - Chr2:80554026-80554045 None:intergenic 30.0%
GTTGCATTAATAATATTGGC+TGG + Chr2:80548765-80548784 MsG0280011175.01.T01:intron 30.0%
GTTTATGGTAATCTTGGAAA+TGG + Chr2:80547759-80547778 MsG0280011175.01.T01:intron 30.0%
TAACTAAGTGAAGTGAAAAG+AGG - Chr2:80552428-80552447 None:intergenic 30.0%
TACCTTAAAGGTGAATATGT+GGG - Chr2:80551362-80551381 None:intergenic 30.0%
TACGCAACAATCTTCTAAAT+GGG - Chr2:80550422-80550441 None:intergenic 30.0%
TATATGGGGCTATCTAATAT+GGG + Chr2:80551253-80551272 MsG0280011175.01.T01:intron 30.0%
TATCTATGTTTGGTATGTGT+AGG + Chr2:80552819-80552838 MsG0280011175.01.T01:intron 30.0%
TATGGCAAAAGGTAATGAAT+TGG + Chr2:80548163-80548182 MsG0280011175.01.T01:CDS 30.0%
TATTGCCAATTTGTGAATGA+TGG + Chr2:80553577-80553596 MsG0280011175.01.T01:intron 30.0%
TCAGGATATGTATACTTCAT+GGG - Chr2:80553270-80553289 None:intergenic 30.0%
TCCCAATGAATCAACAAATT+AGG - Chr2:80548213-80548232 None:intergenic 30.0%
TCTCATAAATCAAAGCACAA+GGG + Chr2:80553054-80553073 MsG0280011175.01.T01:CDS 30.0%
TGAAAACTGTTACGAAATTG+AGG - Chr2:80549346-80549365 None:intergenic 30.0%
TGGTAAAAAGAAAACCTAAC+AGG - Chr2:80552035-80552054 None:intergenic 30.0%
TGTTACAAAAAGGTTCTTGA+AGG + Chr2:80552933-80552952 MsG0280011175.01.T01:intron 30.0%
TTAAGCACAAGGGAAATATT+TGG + Chr2:80553975-80553994 MsG0280011175.01.T01:three_prime_UTR 30.0%
TTAAGGGATTATGGCTTATT+TGG + Chr2:80548268-80548287 MsG0280011175.01.T01:CDS 30.0%
TTACCTTAAAGGTGAATATG+TGG - Chr2:80551363-80551382 None:intergenic 30.0%
TTATATGGGGCTATCTAATA+TGG + Chr2:80551252-80551271 MsG0280011175.01.T01:intron 30.0%
TTCAAAACAGCATCAATCAT+TGG - Chr2:80553950-80553969 None:intergenic 30.0%
TTGAGCAACATATAAATGAG+AGG + Chr2:80552121-80552140 MsG0280011175.01.T01:intron 30.0%
TTTCAACATTTGATCCGTTT+GGG + Chr2:80547389-80547408 MsG0280011175.01.T01:five_prime_UTR 30.0%
TTTGTTACGTAGATATTTGG+AGG + Chr2:80550905-80550924 MsG0280011175.01.T01:intron 30.0%
! AAGAGCATGAACAAGATATT+TGG + Chr2:80552522-80552541 MsG0280011175.01.T01:CDS 30.0%
! AGATATGGATTTTCTTCTGA+AGG - Chr2:80551900-80551919 None:intergenic 30.0%
! ATAATGTTAGGTTGCAAATC+AGG - Chr2:80553349-80553368 None:intergenic 30.0%
! CACCTGACATGAAAATATTT+TGG + Chr2:80550458-80550477 MsG0280011175.01.T01:intron 30.0%
! CATTATTACATTTGAAGCAG+TGG + Chr2:80553363-80553382 MsG0280011175.01.T01:CDS 30.0%
! TCTTTCTTTATTAGCCTGTT+AGG + Chr2:80552018-80552037 MsG0280011175.01.T01:intron 30.0%
! TTTTCAACATTTGATCCGTT+TGG + Chr2:80547388-80547407 MsG0280011175.01.T01:five_prime_UTR 30.0%
! TTTTCAATTACTGCCTTGAT+TGG + Chr2:80550380-80550399 MsG0280011175.01.T01:intron 30.0%
!! AGATAAAGAGTGTTAATACG+GGG - Chr2:80548830-80548849 None:intergenic 30.0%
!! ATATGGAAGATGATGGAATT+TGG - Chr2:80554232-80554251 None:intergenic 30.0%
!! CTCCTAATTTGTTGATTCAT+TGG + Chr2:80548208-80548227 MsG0280011175.01.T01:CDS 30.0%
!! TAGTTTTTAGATGCCAATCA+AGG - Chr2:80550396-80550415 None:intergenic 30.0%
!! TCACTTGTGTAATTGCTTTT+GGG + Chr2:80552192-80552211 MsG0280011175.01.T01:intron 30.0%
!! TTCCATTGTTTTATGCAGAA+GGG + Chr2:80553292-80553311 MsG0280011175.01.T01:intron 30.0%
!! TTTCCATTGTTTTATGCAGA+AGG + Chr2:80553291-80553310 MsG0280011175.01.T01:intron 30.0%
!! TTTTGTTATAGGTATGAAGG+TGG + Chr2:80548493-80548512 MsG0280011175.01.T01:intron 30.0%
!!! ATTGGGGAGCTATTTTTTTA+GGG + Chr2:80551186-80551205 MsG0280011175.01.T01:intron 30.0%
!!! GAACAAGATATTTGGTTTTG+AGG + Chr2:80552530-80552549 MsG0280011175.01.T01:CDS 30.0%
!!! GATTTTTGAAACAAGTCAAG+TGG + Chr2:80549986-80550005 MsG0280011175.01.T01:intron 30.0%
!!! GTTTTTTTTAGTTATGTGGG+GGG + Chr2:80548666-80548685 MsG0280011175.01.T01:intron 30.0%
!!! TAATGCTTATTTTGTGTGGT+TGG + Chr2:80552382-80552401 MsG0280011175.01.T01:intron 30.0%
!!! TTATTTTTGCCTCATGTGTA+CGG + Chr2:80551721-80551740 MsG0280011175.01.T01:intron 30.0%
!!! TTGCTTTTTGTCTTTGCTTT+TGG - Chr2:80550258-80550277 None:intergenic 30.0%
!!! TTTTTGTTTTGTGATGGTCT+TGG - Chr2:80550227-80550246 None:intergenic 30.0%
!!! TTTTTTTTAGTTATGTGGGG+GGG + Chr2:80548667-80548686 MsG0280011175.01.T01:intron 30.0%
AAACCTAAGAAGAGGTTGTT+TGG - Chr2:80552255-80552274 None:intergenic 35.0%
AAGTTGTTTGCATAAGCCAT+TGG - Chr2:80553868-80553887 None:intergenic 35.0%
AATGGTGACTTTGTAGATAG+AGG + Chr2:80551924-80551943 MsG0280011175.01.T01:CDS 35.0%
ACAGTTATGTCAACAAGAGA+AGG - Chr2:80550762-80550781 None:intergenic 35.0%
ACCTTAAAGGTGAATATGTG+GGG - Chr2:80551361-80551380 None:intergenic 35.0%
ACGCAACAATCTTCTAAATG+GGG - Chr2:80550421-80550440 None:intergenic 35.0%
ACGTAGATATTTGGAGGATA+GGG + Chr2:80550911-80550930 MsG0280011175.01.T01:intron 35.0%
ACTAGACATTGTTTATGGGA+AGG + Chr2:80549139-80549158 MsG0280011175.01.T01:intron 35.0%
ACTCTCAAGTACTTATGGAA+AGG - Chr2:80549776-80549795 None:intergenic 35.0%
AGAAAGCTCTTAAGGGATTA+TGG + Chr2:80548259-80548278 MsG0280011175.01.T01:CDS 35.0%
AGAAAGGGAAGAAACATACA+AGG + Chr2:80550175-80550194 MsG0280011175.01.T01:intron 35.0%
AGAAGATCAAAATGCTCTCA+TGG + Chr2:80548373-80548392 MsG0280011175.01.T01:intron 35.0%
AGCAAAGACAAAAAGCAACA+TGG + Chr2:80550260-80550279 MsG0280011175.01.T01:intron 35.0%
AGGCTAATAAAGAAAGAGCT+AGG - Chr2:80552015-80552034 None:intergenic 35.0%
AGGTGCTTCAAATCGAATAA+AGG - Chr2:80553329-80553348 None:intergenic 35.0%
AGGTTGTAACAAAAGAGACA+TGG - Chr2:80553148-80553167 None:intergenic 35.0%
ATAGTAGCTACAATTGTGGT+TGG + Chr2:80549869-80549888 MsG0280011175.01.T01:intron 35.0%
ATATCCACCATAAAACGCTT+TGG - Chr2:80553608-80553627 None:intergenic 35.0%
ATTGCACGAGTTAAACAACA+AGG - Chr2:80547603-80547622 None:intergenic 35.0%
CACATAGTGATGGTTGTAAT+AGG + Chr2:80549594-80549613 MsG0280011175.01.T01:CDS 35.0%
CATACCTAAAACAATGAACC+AGG - Chr2:80550695-80550714 None:intergenic 35.0%
CATACCTATAACAAAACCGA+TGG - Chr2:80548489-80548508 None:intergenic 35.0%
CATTCGTAGAACATACAAGT+AGG - Chr2:80548426-80548445 None:intergenic 35.0%
CTACTTGTATGTTCTACGAA+TGG + Chr2:80548424-80548443 MsG0280011175.01.T01:intron 35.0%
GAAGGAACGTTGTTAATTGT+GGG + Chr2:80549567-80549586 MsG0280011175.01.T01:CDS 35.0%
GACATACTTTCTTCTTGGAT+TGG + Chr2:80553803-80553822 MsG0280011175.01.T01:intron 35.0%
GCAAAAGGTAATGAATTGGA+TGG + Chr2:80548167-80548186 MsG0280011175.01.T01:CDS 35.0%
GGAAAACATGTTACTGTTTG+TGG + Chr2:80550789-80550808 MsG0280011175.01.T01:CDS 35.0%
GGCTAATAAAGAAAGAGCTA+GGG - Chr2:80552014-80552033 None:intergenic 35.0%
GGGAGTAATATTTATATGCG+TGG + Chr2:80549318-80549337 MsG0280011175.01.T01:intron 35.0%
GGTTATGAGATTCAACATGA+CGG + Chr2:80553075-80553094 MsG0280011175.01.T01:CDS 35.0%
GTTACCTGATCACAGTAATT+TGG - Chr2:80553126-80553145 None:intergenic 35.0%
TAAGAGATACATACAAGTGC+TGG - Chr2:80550316-80550335 None:intergenic 35.0%
TAAGCATCTAATCAGGTGAT+AGG - Chr2:80552324-80552343 None:intergenic 35.0%
TAAGCTTATACCATGCCTAA+TGG - Chr2:80549911-80549930 None:intergenic 35.0%
TACCCTTCTGCATAAAACAA+TGG - Chr2:80553297-80553316 None:intergenic 35.0%
TACGTAGATATTTGGAGGAT+AGG + Chr2:80550910-80550929 MsG0280011175.01.T01:intron 35.0%
TACTTATGGAAAGGTTTGTG+AGG - Chr2:80549767-80549786 None:intergenic 35.0%
TATTCGGGATCAAGAATAGA+AGG + Chr2:80550515-80550534 MsG0280011175.01.T01:CDS 35.0%
TATTTGGCATACTACTGTGT+GGG + Chr2:80548284-80548303 MsG0280011175.01.T01:CDS 35.0%
TCAATTTGTGAGGTTATGTC+TGG + Chr2:80553776-80553795 MsG0280011175.01.T01:intron 35.0%
TCTCTACTCTCAAGTACTTA+TGG - Chr2:80549781-80549800 None:intergenic 35.0%
TCTTTGACCATTTATGTGGA+GGG + Chr2:80551163-80551182 MsG0280011175.01.T01:intron 35.0%
TGAAGGAACGTTGTTAATTG+TGG + Chr2:80549566-80549585 MsG0280011175.01.T01:CDS 35.0%
TGCTTACTTTACAGCGTATT+TGG + Chr2:80554082-80554101 MsG0280011175.01.T01:three_prime_UTR 35.0%
TTATGTGTCTTACCTTCATC+AGG - Chr2:80552732-80552751 None:intergenic 35.0%
TTATTTGGCATACTACTGTG+TGG + Chr2:80548283-80548302 MsG0280011175.01.T01:CDS 35.0%
TTCACTTCACTTAGTTAGCT+GGG + Chr2:80552431-80552450 MsG0280011175.01.T01:intron 35.0%
TTCAGTGTTATCAATTGCAG+TGG - Chr2:80553674-80553693 None:intergenic 35.0%
TTCTTTGACCATTTATGTGG+AGG + Chr2:80551162-80551181 MsG0280011175.01.T01:intron 35.0%
TTGATTCATTGGGATTGTTG+GGG + Chr2:80548219-80548238 MsG0280011175.01.T01:CDS 35.0%
TTGGTGAGGATGTTACAAAA+AGG + Chr2:80552923-80552942 MsG0280011175.01.T01:intron 35.0%
TTGTGGAATTGAGGAAATTG+TGG + Chr2:80548350-80548369 MsG0280011175.01.T01:intron 35.0%
TTGTTTATCACATGAGCCAA+AGG - Chr2:80552621-80552640 None:intergenic 35.0%
TTTATGCAGAAGGGTAACAA+AGG + Chr2:80553301-80553320 MsG0280011175.01.T01:intron 35.0%
TTTCACTTCACTTAGTTAGC+TGG + Chr2:80552430-80552449 MsG0280011175.01.T01:intron 35.0%
! AATAATTTTACGGCATGTGC+AGG + Chr2:80553177-80553196 MsG0280011175.01.T01:intron 35.0%
! ACACTCTTTATCTAAAGCCT+TGG + Chr2:80548837-80548856 MsG0280011175.01.T01:intron 35.0%
! ACAGTAACATGTTTTCCATG+AGG - Chr2:80550786-80550805 None:intergenic 35.0%
! AGATAGAGGATCATTTTCAG+TGG + Chr2:80551938-80551957 MsG0280011175.01.T01:CDS 35.0%
! CTACCTAAACCTTGTTTCAA+AGG + Chr2:80547638-80547657 MsG0280011175.01.T01:CDS 35.0%
! CTCAAGAAGAACTTTTAACG+TGG - Chr2:80554164-80554183 None:intergenic 35.0%
! CTCACTTGTGTAATTGCTTT+TGG + Chr2:80552191-80552210 MsG0280011175.01.T01:intron 35.0%
! CTTGTTACAGATTGTTGTTG+CGG + Chr2:80547418-80547437 MsG0280011175.01.T01:five_prime_UTR 35.0%
! GATGCGAAATATGATGATGA+TGG + Chr2:80549413-80549432 MsG0280011175.01.T01:intron 35.0%
! GTGTTGACATACTTTCTTCT+TGG + Chr2:80553798-80553817 MsG0280011175.01.T01:intron 35.0%
! GTTGATTCATTGGGATTGTT+GGG + Chr2:80548218-80548237 MsG0280011175.01.T01:CDS 35.0%
! TTGTCCTGGTTCATTGTTTT+AGG + Chr2:80550688-80550707 MsG0280011175.01.T01:intron 35.0%
!! AACATGAGAGTACTTCCTAT+TGG - Chr2:80549714-80549733 None:intergenic 35.0%
!! ACATGAGAGTACTTCCTATT+GGG - Chr2:80549713-80549732 None:intergenic 35.0%
!! ATTTGCTCACCTTTGAAACA+AGG - Chr2:80547650-80547669 None:intergenic 35.0%
!! ATTTTCAAGGATGAGGTTTG+TGG + Chr2:80548333-80548352 MsG0280011175.01.T01:intron 35.0%
!! TACAAGTACAAGAAGTATCG+AGG + Chr2:80550200-80550219 MsG0280011175.01.T01:intron 35.0%
!! TCACCTTTGAAACAAGGTTT+AGG - Chr2:80547644-80547663 None:intergenic 35.0%
!! TCTGCTGTGTTTGTTTTTCT+GGG + Chr2:80548559-80548578 MsG0280011175.01.T01:intron 35.0%
!! TGTAAAGCCCACTTAGTTTT+TGG + Chr2:80548624-80548643 MsG0280011175.01.T01:intron 35.0%
!! TGTTGATTCATTGGGATTGT+TGG + Chr2:80548217-80548236 MsG0280011175.01.T01:CDS 35.0%
!! TTCTGCTGTGTTTGTTTTTC+TGG + Chr2:80548558-80548577 MsG0280011175.01.T01:intron 35.0%
!! TTTTTAGTCAAGTAGCCTAG+CGG - Chr2:80551396-80551415 None:intergenic 35.0%
!!! AAAGCGTTTTATGGTGGATA+TGG + Chr2:80553607-80553626 MsG0280011175.01.T01:intron 35.0%
!!! CGGTTTTGTTATAGGTATGA+AGG + Chr2:80548490-80548509 MsG0280011175.01.T01:intron 35.0%
!!! GATTGGGGAGCTATTTTTTT+AGG + Chr2:80551185-80551204 MsG0280011175.01.T01:intron 35.0%
!!! TTGGGGAGCTATTTTTTTAG+GGG + Chr2:80551187-80551206 MsG0280011175.01.T01:intron 35.0%
!!! TTTTTTTCTAGGTGTGTGCT+GGG + Chr2:80548596-80548615 MsG0280011175.01.T01:intron 35.0%
AAGATCATAGAACTGCATGC+AGG - Chr2:80551850-80551869 None:intergenic 40.0%
AATATCATAAGCGTGTGGCA+CGG - Chr2:80553221-80553240 None:intergenic 40.0%
AATGTCGAATTCTTGGCTTC+TGG + Chr2:80553638-80553657 MsG0280011175.01.T01:intron 40.0%
ACCATTTATGTGGAGGGATT+GGG + Chr2:80551169-80551188 MsG0280011175.01.T01:intron 40.0%
ACCCCACATATTCACCTTTA+AGG + Chr2:80551357-80551376 MsG0280011175.01.T01:intron 40.0%
AGCAAACATCTTGGAAACCT+TGG - Chr2:80547576-80547595 None:intergenic 40.0%
ATGTATGAGTTCCAGCAACT+AGG - Chr2:80551466-80551485 None:intergenic 40.0%
CACACCTAGAAAAAAACCGA+TGG - Chr2:80548592-80548611 None:intergenic 40.0%
CACTTGCACAACACATTCTT+TGG - Chr2:80552055-80552074 None:intergenic 40.0%
GAAACCAACGAGAGAGAAAA+AGG - Chr2:80549275-80549294 None:intergenic 40.0%
GCTATTGAAACACCATATGG+CGG + Chr2:80553518-80553537 MsG0280011175.01.T01:intron 40.0%
GCTCATTCACACTGGATTAA+AGG + Chr2:80549648-80549667 MsG0280011175.01.T01:CDS 40.0%
GGCTTAGAATGTCGAATTCT+TGG + Chr2:80553631-80553650 MsG0280011175.01.T01:intron 40.0%
GGTGAGCAAATCTCAATCAA+AGG + Chr2:80547659-80547678 MsG0280011175.01.T01:intron 40.0%
GTATATGACAATTGCTCCCT+TGG + Chr2:80550835-80550854 MsG0280011175.01.T01:intron 40.0%
GTATGTTCTACGAATGGTGT+TGG + Chr2:80548430-80548449 MsG0280011175.01.T01:intron 40.0%
GTGATGGTTGTAATAGGATC+TGG + Chr2:80549600-80549619 MsG0280011175.01.T01:CDS 40.0%
GTTGACATAACTGTTCCTCA+TGG + Chr2:80550768-80550787 MsG0280011175.01.T01:CDS 40.0%
TCAAAATGCTCTCATGGAGA+TGG + Chr2:80548379-80548398 MsG0280011175.01.T01:intron 40.0%
TCAGCCATGTATATAGCTAG+AGG + Chr2:80552486-80552505 MsG0280011175.01.T01:intron 40.0%
TGACCAAACAACCTCTTCTT+AGG + Chr2:80552249-80552268 MsG0280011175.01.T01:intron 40.0%
TGACCCCATCAACACTAAAA+AGG - Chr2:80552668-80552687 None:intergenic 40.0%
TGCCAATTTGTGAATGATGG+TGG + Chr2:80553580-80553599 MsG0280011175.01.T01:intron 40.0%
TGCTCCAAATTACTGTGATC+AGG + Chr2:80553119-80553138 MsG0280011175.01.T01:CDS 40.0%
TGGGCTATTGAAACACCATA+TGG + Chr2:80553515-80553534 MsG0280011175.01.T01:intron 40.0%
TGTATAATATATGCAGGGGC+CGG - Chr2:80551532-80551551 None:intergenic 40.0%
TGTTGCTAGTAACTTCAAGG+TGG + Chr2:80550879-80550898 MsG0280011175.01.T01:intron 40.0%
TTAAATCCTCCGTACACATG+AGG - Chr2:80551733-80551752 None:intergenic 40.0%
TTGAAAACCAACAGCAAACC+CGG - Chr2:80547375-80547394 None:intergenic 40.0%
TTGAAACAAACGCACCCTTA+AGG + Chr2:80548075-80548094 MsG0280011175.01.T01:intron 40.0%
TTGCTAGTTGTTGCTCCATT+AGG + Chr2:80549893-80549912 MsG0280011175.01.T01:intron 40.0%
TTTAAGTGCATGTCTCCATC+TGG + Chr2:80551984-80552003 MsG0280011175.01.T01:CDS 40.0%
! AAGAAAGTTTTCGTCGTCCA+TGG + Chr2:80552639-80552658 MsG0280011175.01.T01:CDS 40.0%
! ACATCTTTTCCTTCATTGCG+AGG + Chr2:80548128-80548147 MsG0280011175.01.T01:CDS 40.0%
! CAAACAGGTTGGAAATTCGA+AGG - Chr2:80547819-80547838 None:intergenic 40.0%
! CACTAGCTTGATATGGCAAA+AGG + Chr2:80548152-80548171 MsG0280011175.01.T01:CDS 40.0%
! CTCTTTATCTAAAGCCTTGG+AGG + Chr2:80548840-80548859 MsG0280011175.01.T01:intron 40.0%
! TAAGGGTGCGTTTGTTTCAA+GGG - Chr2:80548075-80548094 None:intergenic 40.0%
! TTAAGGGTGCGTTTGTTTCA+AGG - Chr2:80548076-80548095 None:intergenic 40.0%
!! AACAGAAGTGCTTGGATAGA+GGG + Chr2:80550588-80550607 MsG0280011175.01.T01:CDS 40.0%
!! AAGCCATTGGCTTAACATCA+GGG - Chr2:80553855-80553874 None:intergenic 40.0%
!! ATACATACAAGTGCTGGAGT+TGG - Chr2:80550310-80550329 None:intergenic 40.0%
!! GTAATTGCTTTTGGGCAATG+CGG + Chr2:80552200-80552219 MsG0280011175.01.T01:intron 40.0%
!! TAAGCCATTGGCTTAACATC+AGG - Chr2:80553856-80553875 None:intergenic 40.0%
!! TACATACAAGTGCTGGAGTT+GGG - Chr2:80550309-80550328 None:intergenic 40.0%
!! TCGTGATTTTGTTTGCGTTC+CGG + Chr2:80547353-80547372 MsG0280011175.01.T01:five_prime_UTR 40.0%
!! TTTCAAGGAACAGAAGTGCT+TGG + Chr2:80550580-80550599 MsG0280011175.01.T01:CDS 40.0%
!!! AGGCCTTTTTAGTGTTGATG+GGG + Chr2:80552662-80552681 MsG0280011175.01.T01:CDS 40.0%
!!! GAGGCCTTTTTAGTGTTGAT+GGG + Chr2:80552661-80552680 MsG0280011175.01.T01:CDS 40.0%
!!! GATATTTGGTTTTGAGGGTG+AGG + Chr2:80552536-80552555 MsG0280011175.01.T01:CDS 40.0%
!!! GGAGCTATTTTTTTAGGGGA+GGG + Chr2:80551191-80551210 MsG0280011175.01.T01:intron 40.0%
!!! GTTTTTTTCTAGGTGTGTGC+TGG + Chr2:80548595-80548614 MsG0280011175.01.T01:intron 40.0%
AAGAGCTAGGGTTTACCAGA+TGG - Chr2:80552002-80552021 None:intergenic 45.0%
AAGAGGTTGTTTGGTCACGA+GGG - Chr2:80552246-80552265 None:intergenic 45.0%
AAGGTGAATATGTGGGGTGT+CGG - Chr2:80551355-80551374 None:intergenic 45.0%
ACAAACGCACCCTTAAGGAT+TGG + Chr2:80548080-80548099 MsG0280011175.01.T01:intron 45.0%
ACACCCTGATGTTAAGCCAA+TGG + Chr2:80553849-80553868 MsG0280011175.01.T01:CDS 45.0%
ACCAGCTGCCAAAAACTAAG+TGG - Chr2:80548635-80548654 None:intergenic 45.0%
AGTTGTTGCTCCATTAGGCA+TGG + Chr2:80549898-80549917 MsG0280011175.01.T01:intron 45.0%
ATACTACTGTGTGGGTGGTA+TGG + Chr2:80548292-80548311 MsG0280011175.01.T01:CDS 45.0%
ATAGAGCGGACGACTTACAA+AGG - Chr2:80548700-80548719 None:intergenic 45.0%
ATTCTTGATCCCGAATACCG+TGG - Chr2:80550512-80550531 None:intergenic 45.0%
CAAAATCACGACTGTCTCGA+CGG - Chr2:80547344-80547363 None:intergenic 45.0%
CAACACTAAAAAGGCCTCCA+TGG - Chr2:80552659-80552678 None:intergenic 45.0%
CAACATTTGATCCGTTTGGG+TGG + Chr2:80547392-80547411 MsG0280011175.01.T01:five_prime_UTR 45.0%
CAAGGCTTGAGCAAACATCT+TGG - Chr2:80547585-80547604 None:intergenic 45.0%
CACATTGGGCTCGTTTGTTT+GGG + Chr2:80548870-80548889 MsG0280011175.01.T01:intron 45.0%
CCAAGTTGCTATGTCTTCTC+CGG + Chr2:80547454-80547473 MsG0280011175.01.T01:exon 45.0%
CCAGCTGCCAAAAACTAAGT+GGG - Chr2:80548634-80548653 None:intergenic 45.0%
CCATTTATGTGGAGGGATTG+GGG + Chr2:80551170-80551189 MsG0280011175.01.T01:intron 45.0%
CGCCACCATCATTCACAAAT+TGG - Chr2:80553585-80553604 None:intergenic 45.0%
CTAGAAAAAAACCGATGGCC+AGG - Chr2:80548587-80548606 None:intergenic 45.0%
GACCATTTATGTGGAGGGAT+TGG + Chr2:80551168-80551187 MsG0280011175.01.T01:intron 45.0%
GATGGTCGCATAAATCGAAC+AGG + Chr2:80549431-80549450 MsG0280011175.01.T01:intron 45.0%
GATGTGCATGGTCAGGTAAT+TGG + Chr2:80550813-80550832 MsG0280011175.01.T01:intron 45.0%
GGATGAGGTTTGTGGAATTG+AGG + Chr2:80548341-80548360 MsG0280011175.01.T01:intron 45.0%
GGTAAATTTCTCTAGCCGCT+AGG + Chr2:80551378-80551397 MsG0280011175.01.T01:intron 45.0%
GTAACAAGATGCCACCCAAA+CGG - Chr2:80547406-80547425 None:intergenic 45.0%
GTATAATATATGCAGGGGCC+GGG - Chr2:80551531-80551550 None:intergenic 45.0%
TAACGGCGAAGGCAATCATT+CGG - Chr2:80548459-80548478 None:intergenic 45.0%
TCAATCATTGGCAGCTCTTC+TGG - Chr2:80553938-80553957 None:intergenic 45.0%
TCATTGGGATTGTTGGGGTA+TGG + Chr2:80548224-80548243 MsG0280011175.01.T01:CDS 45.0%
TCCTCTCGACCAATCCTTAA+GGG - Chr2:80548092-80548111 None:intergenic 45.0%
TGAGCTTAGCTCACTTGGTA+AGG + Chr2:80551291-80551310 MsG0280011175.01.T01:intron 45.0%
TGCATAATTTATGCAGGGGC+CGG + Chr2:80551319-80551338 MsG0280011175.01.T01:intron 45.0%
TGGCTATTGCTCATTCACAC+TGG + Chr2:80549640-80549659 MsG0280011175.01.T01:CDS 45.0%
TGGTCAAGTATCCTAGTTGC+TGG + Chr2:80551452-80551471 MsG0280011175.01.T01:intron 45.0%
TGTGTCTTACCTTCATCAGG+AGG - Chr2:80552729-80552748 None:intergenic 45.0%
TTCCTCTCGACCAATCCTTA+AGG - Chr2:80548093-80548112 None:intergenic 45.0%
! AAAGTTTTCGTCGTCCATGG+AGG + Chr2:80552642-80552661 MsG0280011175.01.T01:CDS 45.0%
! ATTGGCTTAACATCAGGGTG+TGG - Chr2:80553850-80553869 None:intergenic 45.0%
! GTGAGTCTAGCTCAGTTGAA+AGG - Chr2:80551560-80551579 None:intergenic 45.0%
! TATCTAAAGCCTTGGAGGCT+TGG + Chr2:80548845-80548864 MsG0280011175.01.T01:intron 45.0%
! TGCTCCTTTTTCTCTCTCGT+TGG + Chr2:80549268-80549287 MsG0280011175.01.T01:intron 45.0%
! TTTTGTGAGCCTCCTGATGA+AGG + Chr2:80552717-80552736 MsG0280011175.01.T01:CDS 45.0%
! TTTTTGCCTCATGTGTACGG+AGG + Chr2:80551724-80551743 MsG0280011175.01.T01:intron 45.0%
!! AAACACCATATGGCGGATTG+TGG + Chr2:80553525-80553544 MsG0280011175.01.T01:intron 45.0%
!! AGGATCTGGAGTGTTGTCAT+TGG + Chr2:80549614-80549633 MsG0280011175.01.T01:CDS 45.0%
!! CGTGATTTTGTTTGCGTTCC+GGG + Chr2:80547354-80547373 MsG0280011175.01.T01:five_prime_UTR 45.0%
!! GAACAGAAGTGCTTGGATAG+AGG + Chr2:80550587-80550606 MsG0280011175.01.T01:CDS 45.0%
!! GGAGGCCTTTTTAGTGTTGA+TGG + Chr2:80552660-80552679 MsG0280011175.01.T01:CDS 45.0%
!! GGTTGATGCATGACTTGCTA+TGG + Chr2:80552841-80552860 MsG0280011175.01.T01:intron 45.0%
!! TGGAGTGTTGTCATTGGCAT+TGG + Chr2:80549620-80549639 MsG0280011175.01.T01:CDS 45.0%
!! TGTTTGTTTTTCTGGGCTCC+TGG + Chr2:80548566-80548585 MsG0280011175.01.T01:intron 45.0%
!! TTAAGGATTGGTCGAGAGGA+AGG + Chr2:80548092-80548111 MsG0280011175.01.T01:intron 45.0%
!!! AGGGCCATCGGTTTTGTTAT+AGG + Chr2:80548482-80548501 MsG0280011175.01.T01:intron 45.0%
!!! CTGGCCATCGGTTTTTTTCT+AGG + Chr2:80548585-80548604 MsG0280011175.01.T01:intron 45.0%
!!! GCGTTTTATGGTGGATATGG+TGG + Chr2:80553610-80553629 MsG0280011175.01.T01:intron 45.0%
!!! GGGAGCTATTTTTTTAGGGG+AGG + Chr2:80551190-80551209 MsG0280011175.01.T01:intron 45.0%
!!! TGGGTGCTTTTGTTTTGGTG+AGG + Chr2:80552909-80552928 MsG0280011175.01.T01:intron 45.0%
!! ATTATAATAAAAAATGAAAA+AGG + Chr2:80553469-80553488 MsG0280011175.01.T01:intron 5.0%
!! TAAAATAAAAATATATGATT+TGG + Chr2:80549087-80549106 MsG0280011175.01.T01:intron 5.0%
!!! AAATTTATTTTTACTAAAAA+TGG + Chr2:80551657-80551676 MsG0280011175.01.T01:intron 5.0%
!!! ATATTATTTTTGATATATTA+TGG + Chr2:80552279-80552298 MsG0280011175.01.T01:intron 5.0%
AAACCGATGGCCCTTCCTAA+CGG - Chr2:80548476-80548495 None:intergenic 50.0%
AACGGCGAAGGCAATCATTC+GGG - Chr2:80548458-80548477 None:intergenic 50.0%
ACTGTTTGTGGCGATGTGCA+TGG + Chr2:80550801-80550820 MsG0280011175.01.T01:CDS 50.0%
AGAGGTTGTTTGGTCACGAG+GGG - Chr2:80552245-80552264 None:intergenic 50.0%
AGATGTCGAGCCACGGTATT+CGG + Chr2:80550499-80550518 MsG0280011175.01.T01:intron 50.0%
AGCTAGTGACCTCGCAATGA+AGG - Chr2:80548140-80548159 None:intergenic 50.0%
AGTGTCCGGAATTCGAACTC+CGG + Chr2:80551505-80551524 MsG0280011175.01.T01:intron 50.0%
ATCAATTGCAGTGGCAGACG+AGG - Chr2:80553665-80553684 None:intergenic 50.0%
ATCCACAATCTCCCTGGAAG+AGG + Chr2:80552868-80552887 MsG0280011175.01.T01:intron 50.0%
ATTGCCTTCGCCGTTAGGAA+GGG + Chr2:80548463-80548482 MsG0280011175.01.T01:intron 50.0%
ATTGTTGGGGTATGGAGGGA+AGG + Chr2:80548232-80548251 MsG0280011175.01.T01:CDS 50.0%
CACGGTTGCATCACAATCCA+AGG + Chr2:80547556-80547575 MsG0280011175.01.T01:CDS 50.0%
CAGCTGCTTGCAACCTTGTT+TGG + Chr2:80550343-80550362 MsG0280011175.01.T01:intron 50.0%
CATAATTTATGCAGGGGCCG+GGG + Chr2:80551321-80551340 MsG0280011175.01.T01:intron 50.0%
CCCCAATCCCTCCACATAAA+TGG - Chr2:80551173-80551192 None:intergenic 50.0%
CCGGAGAAGACATAGCAACT+TGG - Chr2:80547457-80547476 None:intergenic 50.0%
CGCTAATAGATGTCGAGCCA+CGG + Chr2:80550492-80550511 MsG0280011175.01.T01:intron 50.0%
CTTGGATTGTGATGCAACCG+TGG - Chr2:80547558-80547577 None:intergenic 50.0%
GAAGAGGTTGTTTGGTCACG+AGG - Chr2:80552247-80552266 None:intergenic 50.0%
GAATGATTGCCTTCGCCGTT+AGG + Chr2:80548458-80548477 MsG0280011175.01.T01:intron 50.0%
GAGCTAGACTCACGAAGACA+AGG + Chr2:80551567-80551586 MsG0280011175.01.T01:intron 50.0%
GCACATTGGGCTCGTTTGTT+TGG + Chr2:80548869-80548888 MsG0280011175.01.T01:intron 50.0%
GCATAATTTATGCAGGGGCC+GGG + Chr2:80551320-80551339 MsG0280011175.01.T01:intron 50.0%
GGTTTAGGTAGCTGTGATGC+AGG - Chr2:80547629-80547648 None:intergenic 50.0%
TCAATTGCAGTGGCAGACGA+GGG - Chr2:80553664-80553683 None:intergenic 50.0%
TGGGATTGTTGGGGTATGGA+GGG + Chr2:80548228-80548247 MsG0280011175.01.T01:CDS 50.0%
TGTGGGTGCACACATAGTGA+TGG + Chr2:80549584-80549603 MsG0280011175.01.T01:CDS 50.0%
TTGGCATACTACTGTGTGGG+TGG + Chr2:80548287-80548306 MsG0280011175.01.T01:CDS 50.0%
TTGGGATTGTTGGGGTATGG+AGG + Chr2:80548227-80548246 MsG0280011175.01.T01:CDS 50.0%
TTGTTCGCGGAATGCGTAGA+TGG - Chr2:80550080-80550099 None:intergenic 50.0%
! AGGTGAATATGTGGGGTGTC+GGG - Chr2:80551354-80551373 None:intergenic 50.0%
! CTGCGAGTTGAGACAGACTT+TGG - Chr2:80547524-80547543 None:intergenic 50.0%
! GCGAGGTCACTAGCTTGATA+TGG + Chr2:80548145-80548164 MsG0280011175.01.T01:CDS 50.0%
!! ACCCTTAAGGATTGGTCGAG+AGG + Chr2:80548088-80548107 MsG0280011175.01.T01:intron 50.0%
!! GGCGATGGGTGCTTTTGTTT+TGG + Chr2:80552904-80552923 MsG0280011175.01.T01:intron 50.0%
!! TTGGAGGCTTGGTGCACATT+GGG + Chr2:80548856-80548875 MsG0280011175.01.T01:intron 50.0%
!!! CCCACTTAGTTTTTGGCAGC+TGG + Chr2:80548631-80548650 MsG0280011175.01.T01:intron 50.0%
ATGCGACCAAGCAAGGCCAA+GGG - Chr2:80547496-80547515 None:intergenic 55.0%
ATGCGGTGAAGTCGAGTGTC+CGG + Chr2:80551491-80551510 MsG0280011175.01.T01:intron 55.0%
CAACACAATGCCTCTGCCCT+TGG + Chr2:80547477-80547496 MsG0280011175.01.T01:CDS 55.0%
CAATGTGCACCAAGCCTCCA+AGG - Chr2:80548857-80548876 None:intergenic 55.0%
CGCTGTGAGCTTAGCTCACT+TGG + Chr2:80551286-80551305 MsG0280011175.01.T01:intron 55.0%
GAAGGTGGATGCTGTCAAGC+TGG + Chr2:80548508-80548527 MsG0280011175.01.T01:intron 55.0%
GATGTCGAGCCACGGTATTC+GGG + Chr2:80550500-80550519 MsG0280011175.01.T01:intron 55.0%
GATTGCCTTCGCCGTTAGGA+AGG + Chr2:80548462-80548481 MsG0280011175.01.T01:intron 55.0%
GCTTGCTTGGTCCTCTTCCA+GGG - Chr2:80552882-80552901 None:intergenic 55.0%
GGAGTGATCCACAATCTCCC+TGG + Chr2:80552862-80552881 MsG0280011175.01.T01:intron 55.0%
GGTGTAGATGCGACCAAGCA+AGG - Chr2:80547503-80547522 None:intergenic 55.0%
GTCCTCTTCCAGGGAGATTG+TGG - Chr2:80552873-80552892 None:intergenic 55.0%
TGCCACCACAATCCGCCATA+TGG - Chr2:80553533-80553552 None:intergenic 55.0%
TGCTGGAGTTGGGCTGTTCT+TGG - Chr2:80550299-80550318 None:intergenic 55.0%
TTGTGGCGATGTGCATGGTC+AGG + Chr2:80550806-80550825 MsG0280011175.01.T01:CDS 55.0%
! CTCAACTCGCAGTTTTGCGC+AGG + Chr2:80547532-80547551 MsG0280011175.01.T01:CDS 55.0%
! TTTTCTGGGCTCCTGGCCAT+CGG + Chr2:80548573-80548592 MsG0280011175.01.T01:intron 55.0%
!! CACCATATGGCGGATTGTGG+TGG + Chr2:80553528-80553547 MsG0280011175.01.T01:intron 55.0%
!! CTTGGAGGCTTGGTGCACAT+TGG + Chr2:80548855-80548874 MsG0280011175.01.T01:intron 55.0%
!! GGCGCCAAAGCGTTTTATGG+TGG + Chr2:80553601-80553620 MsG0280011175.01.T01:intron 55.0%
!! GGTGAATATGTGGGGTGTCG+GGG - Chr2:80551353-80551372 None:intergenic 55.0%
!! GGTGGCGCCAAAGCGTTTTA+TGG + Chr2:80553598-80553617 MsG0280011175.01.T01:intron 55.0%
!! TTGCGTTCCGGGTTTGCTGT+TGG + Chr2:80547365-80547384 MsG0280011175.01.T01:five_prime_UTR 55.0%
AATATATGCAGGGGCCGGGC+CGG - Chr2:80551527-80551546 None:intergenic 60.0%
ATGGCCCTTCCTAACGGCGA+AGG - Chr2:80548470-80548489 None:intergenic 60.0%
CGCTTGCTTGGTCCTCTTCC+AGG - Chr2:80552883-80552902 None:intergenic 60.0%
GACCAAGCAAGCGTGGCGAT+GGG + Chr2:80552890-80552909 MsG0280011175.01.T01:intron 60.0%
GATGCGACCAAGCAAGGCCA+AGG - Chr2:80547497-80547516 None:intergenic 60.0%
GGAAGAGGACCAAGCAAGCG+TGG + Chr2:80552883-80552902 MsG0280011175.01.T01:intron 60.0%
TCGCCGTTAGGAAGGGCCAT+CGG + Chr2:80548470-80548489 MsG0280011175.01.T01:intron 60.0%
! TCGCAGTTTTGCGCAGGCCA+CGG + Chr2:80547538-80547557 MsG0280011175.01.T01:CDS 60.0%
!! GGGCAGAGGCATTGTGTTGC+CGG - Chr2:80547476-80547495 None:intergenic 60.0%
CACCCATCGCCACGCTTGCT+TGG - Chr2:80552895-80552914 None:intergenic 65.0%
CCAAGCAAGGCCAAGGGCAG+AGG - Chr2:80547490-80547509 None:intergenic 65.0%
CCGGAATTCGAACTCCGGCC+CGG + Chr2:80551510-80551529 MsG0280011175.01.T01:intron 65.0%
CCGGGCCGGAGTTCGAATTC+CGG - Chr2:80551513-80551532 None:intergenic 65.0%
GGACCAAGCAAGCGTGGCGA+TGG + Chr2:80552889-80552908 MsG0280011175.01.T01:intron 65.0%
!! CCTCTGCCCTTGGCCTTGCT+TGG + Chr2:80547487-80547506 MsG0280011175.01.T01:CDS 65.0%
!! GGGTGTCGGGGTTCGAACCC+CGG - Chr2:80551341-80551360 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 80547315 80554267 80547315 ID=MsG0280011175.01;Name=MsG0280011175.01
Chr2 mRNA 80547315 80554267 80547315 ID=MsG0280011175.01.T01;Parent=MsG0280011175.01;Name=MsG0280011175.01.T01;_AED=0.37;_eAED=0.37;_QI=149|0.55|0.8|1|0.66|0.5|10|361|460
Chr2 exon 80547315 80547659 80547315 ID=MsG0280011175.01.T01:exon:21538;Parent=MsG0280011175.01.T01
Chr2 exon 80548097 80548317 80548097 ID=MsG0280011175.01.T01:exon:21539;Parent=MsG0280011175.01.T01
Chr2 exon 80549564 80549669 80549564 ID=MsG0280011175.01.T01:exon:21540;Parent=MsG0280011175.01.T01
Chr2 exon 80550501 80550609 80550501 ID=MsG0280011175.01.T01:exon:21541;Parent=MsG0280011175.01.T01
Chr2 exon 80550710 80550827 80550710 ID=MsG0280011175.01.T01:exon:21542;Parent=MsG0280011175.01.T01
Chr2 exon 80551858 80552005 80551858 ID=MsG0280011175.01.T01:exon:21543;Parent=MsG0280011175.01.T01
Chr2 exon 80552490 80552738 80552490 ID=MsG0280011175.01.T01:exon:21544;Parent=MsG0280011175.01.T01
Chr2 exon 80553040 80553140 80553040 ID=MsG0280011175.01.T01:exon:21545;Parent=MsG0280011175.01.T01
Chr2 exon 80553310 80553384 80553310 ID=MsG0280011175.01.T01:exon:21546;Parent=MsG0280011175.01.T01
Chr2 exon 80553847 80554267 80553847 ID=MsG0280011175.01.T01:exon:21547;Parent=MsG0280011175.01.T01
Chr2 five_prime_UTR 80547315 80547463 80547315 ID=MsG0280011175.01.T01:five_prime_utr;Parent=MsG0280011175.01.T01
Chr2 CDS 80547464 80547659 80547464 ID=MsG0280011175.01.T01:cds;Parent=MsG0280011175.01.T01
Chr2 CDS 80548097 80548317 80548097 ID=MsG0280011175.01.T01:cds;Parent=MsG0280011175.01.T01
Chr2 CDS 80549564 80549669 80549564 ID=MsG0280011175.01.T01:cds;Parent=MsG0280011175.01.T01
Chr2 CDS 80550501 80550609 80550501 ID=MsG0280011175.01.T01:cds;Parent=MsG0280011175.01.T01
Chr2 CDS 80550710 80550827 80550710 ID=MsG0280011175.01.T01:cds;Parent=MsG0280011175.01.T01
Chr2 CDS 80551858 80552005 80551858 ID=MsG0280011175.01.T01:cds;Parent=MsG0280011175.01.T01
Chr2 CDS 80552490 80552738 80552490 ID=MsG0280011175.01.T01:cds;Parent=MsG0280011175.01.T01
Chr2 CDS 80553040 80553140 80553040 ID=MsG0280011175.01.T01:cds;Parent=MsG0280011175.01.T01
Chr2 CDS 80553310 80553384 80553310 ID=MsG0280011175.01.T01:cds;Parent=MsG0280011175.01.T01
Chr2 CDS 80553847 80553906 80553847 ID=MsG0280011175.01.T01:cds;Parent=MsG0280011175.01.T01
Chr2 three_prime_UTR 80553907 80554267 80553907 ID=MsG0280011175.01.T01:three_prime_utr;Parent=MsG0280011175.01.T01
Gene Sequence

>MsG0280011175.01.T01

ATGTCTTCTCCGGCAACACAATGCCTCTGCCCTTGGCCTTGCTTGGTCGCATCTACACCAAAGTCTGTCTCAACTCGCAGTTTTGCGCAGGCCACGGTTGCATCACAATCCAAGGTTTCCAAGATGTTTGCTCAAGCCTTGTTGTTTAACTCGTGCAATATTCCTGCATCACAGCTACCTAAACCTTGTTTCAAAGGATTGGTCGAGAGGAAGGAAGAATCAAGTAAACATCTTTTCCTTCATTGCGAGGTCACTAGCTTGATATGGCAAAAGGTAATGAATTGGATGGAATTTTCTTTTATCACTCCTCCTAATTTGTTGATTCATTGGGATTGTTGGGGTATGGAGGGAAGGAATAAGAAAGCTCTTAAGGGATTATGGCTTATTTGGCATACTACTGTGTGGGTGGTATGGCAACATGAAGGAACGTTGTTAATTGTGGGTGCACACATAGTGATGGTTGTAATAGGATCTGGAGTGTTGTCATTGGCATTGGCTATTGCTCATTCACACTGGATTAAAGATGTCGAGCCACGGTATTCGGGATCAAGAATAGAAGGAGATACTATTACTTTGGATTTCGTAAAGAAAATGATGAATGATTTCAAGGAACAGAAGTGCTTGGATAGAGGGTATGCATCCAAGATTTTGTTGCAAACAAAAAAGGTTTTGAAAGCTTTGCCTTCTCTTGTTGACATAACTGTTCCTCATGGAAAACATGTTACTGTTTGTGGCGATGTGCATGGTCAGTTCTATGATCTTTTGAATATTTTTGAGCTCAATGGGCTTCCTTCAGAAGAAAATCCATATCTATTTAATGGTGACTTTGTAGATAGAGGATCATTTTCAGTGGAAGTCGCATTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCTGCCATGTATATAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATATTTGGTTTTGAGGGTGAGGTGCGCTCAAAGTTGAATGACAAATTTGTCAAAATGTTTGCGGAAGTATTCAACTGTTTACCTTTGGCTCATGTGATAAACAAGAAAGTTTTCGTCGTCCATGGAGGCCTTTTTAGTGTTGATGGGGTCAAACTCTCTCAAATCCGATCAATTAATCGGTTTTGTGAGCCTCCTGATGAAGATTTAGTTGTGAGATCTCATAAATCAAAGCACAAGGGTTATGAGATTCAACATGACGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGATCAGAAGGGTAACAAAGGTGCCTTTATTCGATTTGAAGCACCTGATTTGCAACCTAACATTATTACATTTGAAGCAGTGCCACACCCTGATGTTAAGCCAATGGCTTATGCAAACAACTTCAACCGATTGTTCTCATAA

Protein sequence

>MsG0280011175.01.T01

MSSPATQCLCPWPCLVASTPKSVSTRSFAQATVASQSKVSKMFAQALLFNSCNIPASQLPKPCFKGLVERKEESSKHLFLHCEVTSLIWQKVMNWMEFSFITPPNLLIHWDCWGMEGRNKKALKGLWLIWHTTVWVVWQHEGTLLIVGAHIVMVVIGSGVLSLALAIAHSHWIKDVEPRYSGSRIEGDTITLDFVKKMMNDFKEQKCLDRGYASKILLQTKKVLKALPSLVDITVPHGKHVTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEVAFTLFAFKCMSPSAMYIARGNHESKSMNKIFGFEGEVRSKLNDKFVKMFAEVFNCLPLAHVINKKVFVVHGGLFSVDGVKLSQIRSINRFCEPPDEDLVVRSHKSKHKGYEIQHDGKLITVFSAPNYCDQKGNKGAFIRFEAPDLQPNIITFEAVPHPDVKPMAYANNFNRLFS*