AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011421.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011421.01.T01 MTR_2g104120 89.258 512 22 1 1 479 325 836 0.0 934
MsG0280011421.01.T01 MTR_1g066890 69.188 542 90 5 1 479 385 912 0.0 719
MsG0280011421.01.T01 MTR_2g104130 83.444 151 5 1 481 611 25 175 8.92e-80 249
MsG0280011421.01.T01 MTR_4g130410 57.616 151 44 1 481 611 25 175 4.64e-52 177
MsG0280011421.01.T01 MTR_1g049120 26.871 588 308 17 2 486 359 927 8.43e-48 180
MsG0280011421.01.T01 MTR_4g130410 57.664 137 38 1 481 597 25 161 5.87e-45 158
MsG0280011421.01.T01 MTR_8g054290 58.594 128 36 3 352 479 2 112 2.89e-36 132
MsG0280011421.01.T01 MTR_8g054270 55.469 128 40 2 352 479 2 112 1.68e-35 130
MsG0280011421.01.T01 MTR_8g054220 50.993 151 54 5 352 501 2 133 2.22e-32 124
MsG0280011421.01.T01 MTR_8g080970 49.219 128 48 2 352 479 2 112 3.13e-29 112
MsG0280011421.01.T01 MTR_2g047912 35.593 236 121 9 247 469 452 669 4.74e-25 110
MsG0280011421.01.T01 MTR_1g072780 32.627 236 112 7 1 216 429 637 1.96e-23 105
MsG0280011421.01.T01 MTR_1g072780 45.918 98 46 1 379 469 868 965 1.20e-17 87.8
MsG0280011421.01.T01 MTR_2g104980 72.581 62 13 1 1 62 300 357 3.61e-21 97.1
MsG0280011421.01.T01 MTR_4g036445 38.655 119 55 2 1 101 381 499 1.80e-18 89.7
MsG0280011421.01.T01 MTR_8g035700 57.143 63 26 1 422 484 4 65 4.33e-15 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011421.01.T01 AT3G18430 66.667 150 30 1 482 611 26 175 1.09e-61 202
MsG0280011421.01.T01 AT3G18430 66.667 150 30 1 482 611 26 175 1.09e-61 202
MsG0280011421.01.T01 AT3G18430 66.667 150 30 1 482 611 26 175 1.09e-61 202
MsG0280011421.01.T01 AT3G09670 40.000 160 77 3 1 142 264 422 1.16e-22 103
MsG0280011421.01.T01 AT3G09670 40.000 160 77 3 1 142 264 422 1.16e-22 103
MsG0280011421.01.T01 AT5G02950 45.578 147 60 4 336 476 500 632 8.43e-21 97.1
MsG0280011421.01.T01 AT5G02950 34.804 204 97 6 1 181 162 352 5.64e-20 94.7
MsG0280011421.01.T01 AT5G02950 45.578 147 60 4 336 476 500 632 8.43e-21 97.1
MsG0280011421.01.T01 AT5G02950 34.804 204 97 6 1 181 162 352 5.64e-20 94.7
MsG0280011421.01.T01 AT3G54760 28.085 235 152 5 236 465 542 764 4.32e-17 85.9
MsG0280011421.01.T01 AT3G54760 28.085 235 152 5 236 465 511 733 4.45e-17 85.5

Find 116 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCGTAGTTACCAAATTTC+TGG 0.164424 2:+83716716 MsG0280011421.01.T01:CDS
TTGATTTATCATCAGCAATT+TGG 0.177060 2:-83716641 None:intergenic
TCACAGGTTCTTGGCCATTC+TGG 0.182957 2:+83721440 MsG0280011421.01.T01:intron
CGCTTTCCTGTGCCTTTCTT+TGG 0.197096 2:-83717532 None:intergenic
TTGAGTTATTACCAGAAATT+TGG 0.199595 2:-83716727 None:intergenic
AGCTTTGCAATGATTCTTAT+TGG 0.225290 2:+83717083 MsG0280011421.01.T01:CDS
TGTACTAAATGCAGATAAAA+AGG 0.239607 2:-83720443 None:intergenic
GCTGGAAAGTATAGCATATT+TGG 0.242511 2:+83717466 MsG0280011421.01.T01:CDS
AAAGTTCATCTCTTTCATTC+TGG 0.263666 2:-83717156 None:intergenic
AACAAGATCTTTGGCCGCTT+TGG 0.275821 2:+83717346 MsG0280011421.01.T01:CDS
TGCTGAAATTAGCCCTGGTT+TGG 0.286789 2:+83717186 MsG0280011421.01.T01:CDS
ATATGGAAATTCTGCCTATA+AGG 0.288583 2:+83716352 MsG0280011421.01.T01:CDS
GACATTGGATGATTTCATTA+AGG 0.296420 2:+83721249 MsG0280011421.01.T01:CDS
ACAAGATCTTTGGCCGCTTT+GGG 0.313431 2:+83717347 MsG0280011421.01.T01:CDS
CACTGCTGTTTCTCCCTTAT+AGG 0.328610 2:-83716366 None:intergenic
CAAGAAAGCAATGGAAATCT+TGG 0.329449 2:+83717220 MsG0280011421.01.T01:CDS
TGATTTATCATCAGCAATTT+GGG 0.336086 2:-83716640 None:intergenic
TTAAATTTGTCACAGGTTCT+TGG 0.342309 2:+83721431 MsG0280011421.01.T01:intron
TACTCTGAAATTTACAAACT+TGG 0.343776 2:+83717297 MsG0280011421.01.T01:CDS
GCCTCAAGACGGGTTGAGTT+TGG 0.350867 2:+83716081 MsG0280011421.01.T01:CDS
AATGGAGAAACAGAATGATT+TGG 0.356096 2:+83716020 None:intergenic
CATCAGCAATTTGGGAATGA+TGG 0.359986 2:-83716632 None:intergenic
AGCGATAGAAAGCCGACAAT+TGG 0.366335 2:-83716272 None:intergenic
TTTGATTTCTCAGGAAGTCT+TGG 0.366861 2:+83721183 MsG0280011421.01.T01:intron
GCTGAAATTAGCCCTGGTTT+GGG 0.370241 2:+83717187 MsG0280011421.01.T01:CDS
TTGATTTCTCAGGAAGTCTT+GGG 0.378929 2:+83721184 MsG0280011421.01.T01:intron
CAAGAGCATGGTGGTGAGAC+TGG 0.380550 2:+83717001 MsG0280011421.01.T01:CDS
AGGTTACTCAAGATGGTTGA+TGG 0.393812 2:+83720397 MsG0280011421.01.T01:CDS
TACAAGCAAATTTAATCAAC+AGG 0.395819 2:-83721485 None:intergenic
TGTTATGAATCCACTTTCTC+AGG 0.398536 2:+83719951 MsG0280011421.01.T01:CDS
ACGGATCTCAACAAGATCTT+TGG 0.401990 2:+83717337 MsG0280011421.01.T01:CDS
ACATTCGCCCTTTAGATTCC+AGG 0.406831 2:-83716526 None:intergenic
CGGAGAAGCGTTTCCTAAGC+TGG 0.411323 2:+83716125 MsG0280011421.01.T01:CDS
ATTTGATTCAGTTTCTCAAC+AGG 0.411656 2:+83719837 MsG0280011421.01.T01:intron
TTGTTGAGATCCGTTGTTGT+AGG 0.427365 2:-83717328 None:intergenic
AAGTTCTCGTGCCCAATTGT+CGG 0.429681 2:+83716260 MsG0280011421.01.T01:CDS
TCGGTTGTTTGAGAGTGATA+TGG 0.432921 2:+83716335 MsG0280011421.01.T01:CDS
ACTTTCTCCTGCAGGATCCT+TGG 0.439999 2:-83716885 None:intergenic
TCTCAGAATATGAAGCAAAC+TGG 0.440101 2:+83716459 MsG0280011421.01.T01:CDS
CTGAGTTTGCAATGCTTGAT+CGG 0.443739 2:+83716316 MsG0280011421.01.T01:CDS
GAAGTTCTAAAAGATTTGTC+TGG 0.444669 2:+83720791 MsG0280011421.01.T01:CDS
GTTAATTGTGTCTCCAGCTT+AGG 0.448853 2:-83716138 None:intergenic
CTTTCTTGTCCTTGTATGAC+CGG 0.450738 2:+83716105 MsG0280011421.01.T01:CDS
AGGTGTCTTTCAAAGACATA+TGG 0.458948 2:+83720769 MsG0280011421.01.T01:intron
TCGGCTTTCTATCGCTCAAA+AGG 0.459598 2:+83716279 MsG0280011421.01.T01:CDS
TACCAGAAATTTGGTAACTA+CGG 0.465277 2:-83716718 None:intergenic
ATCCTGCTTCTTTCAGAACC+TGG 0.474604 2:-83721207 None:intergenic
TTCTCAGGAAGTCTTGGGCC+AGG 0.475351 2:+83721189 MsG0280011421.01.T01:intron
CAACTTGACAGAAATGCTAA+AGG 0.478282 2:+83719889 MsG0280011421.01.T01:CDS
TTTGCAGAGGTTACTCAAGA+TGG 0.478552 2:+83720390 MsG0280011421.01.T01:intron
GCGATAGAAAGCCGACAATT+GGG 0.481424 2:-83716271 None:intergenic
AGGCGGTAACTTTGTAATGA+AGG 0.485092 2:-83717490 None:intergenic
ACTTCTGTGAGAATACTTCA+TGG 0.489690 2:-83716425 None:intergenic
AGTCTATCAAATTCAGTAAG+TGG 0.490483 2:-83716228 None:intergenic
CCAGCTGCTGAAATTAGCCC+TGG 0.493852 2:+83717181 MsG0280011421.01.T01:CDS
GAATCATTGCAAAGCTCCAT+TGG 0.501512 2:-83717076 None:intergenic
TGATATGATACCTGAGAAAG+TGG 0.501757 2:-83719961 None:intergenic
CAGCTTAGGAAACGCTTCTC+CGG 0.502025 2:-83716124 None:intergenic
CTTCACATGTTCCACATGGT+TGG 0.502698 2:-83717254 None:intergenic
GAAGAACTCCTGGAATCTAA+AGG 0.503812 2:+83716518 MsG0280011421.01.T01:CDS
TCTGCATTTAGTACAAAAGC+TGG 0.505330 2:+83720451 MsG0280011421.01.T01:CDS
CCAGGGCTAATTTCAGCAGC+TGG 0.508159 2:-83717181 None:intergenic
AAGAACTCCTGGAATCTAAA+GGG 0.509266 2:+83716519 MsG0280011421.01.T01:CDS
TGTAGCAGCAGCTTCTATAG+AGG 0.509275 2:-83717032 None:intergenic
CGAATGTATGCCAGAAAAGA+AGG 0.511806 2:+83716542 MsG0280011421.01.T01:CDS
CTGGAGAAACTTTCTCCTGC+AGG 0.512925 2:-83716893 None:intergenic
AAAGAAGTATATCATGTCAC+TGG 0.514188 2:-83716912 None:intergenic
AATTCAAAGCATTTCTGAAG+AGG 0.515003 2:+83717117 MsG0280011421.01.T01:CDS
CTGATGATAATTCAATTTCA+CGG 0.515056 2:+83716565 MsG0280011421.01.T01:CDS
TTACCTCGTACACCAAAGAA+AGG 0.521984 2:+83717520 MsG0280011421.01.T01:CDS
ACAAAATTGACAAGTTGCAT+AGG 0.523384 2:-83716186 None:intergenic
CTTCACTGTGTGGCACGAAA+CGG 0.527539 2:+83716664 MsG0280011421.01.T01:CDS
TAATGTCTGAGAAGAACTCC+TGG 0.530043 2:+83716508 MsG0280011421.01.T01:CDS
GGCCAGGTTCTGAAAGAAGC+AGG 0.530644 2:+83721205 MsG0280011421.01.T01:CDS
CGGTCATACAAGGACAAGAA+AGG 0.531176 2:-83716104 None:intergenic
TCAACTATGCTTAGCTGCCA+AGG 0.531364 2:+83716868 MsG0280011421.01.T01:CDS
TTTAGAAGAGGCCTCAAGAC+GGG 0.535656 2:+83716071 MsG0280011421.01.T01:CDS
TCAGAATTTGAAAAGTTCAC+CGG 0.540370 2:+83716935 MsG0280011421.01.T01:CDS
CTTCTGTGAGAATACTTCAT+GGG 0.543368 2:-83716424 None:intergenic
AACGCTTCTCCGGTCATACA+AGG 0.544016 2:-83716114 None:intergenic
TATGGAAATTCTGCCTATAA+GGG 0.546628 2:+83716353 MsG0280011421.01.T01:CDS
ACATGTTCCACATGGTTGGA+AGG 0.547762 2:-83717250 None:intergenic
CGATCAAGCATTGCAAACTC+AGG 0.549744 2:-83716315 None:intergenic
TATGTCAACACCGACACCAA+TGG 0.554470 2:+83717060 MsG0280011421.01.T01:CDS
AAAAGACTGCTACTTGACAT+TGG 0.563411 2:+83721234 MsG0280011421.01.T01:CDS
AATTTCAGAGTAAGAGAAGT+CGG 0.565077 2:-83717286 None:intergenic
GCCAAACTCAACCCGTCTTG+AGG 0.565192 2:-83716082 None:intergenic
CAACCATGTGGAACATGTGA+AGG 0.568784 2:+83717255 MsG0280011421.01.T01:CDS
AGTGGATTCATAACAAACTC+AGG 0.575670 2:-83719943 None:intergenic
TGATGCATTAAACCCAAACC+AGG 0.575754 2:-83717199 None:intergenic
GTGCCTTTCTTTGGTGTACG+AGG 0.581235 2:-83717523 None:intergenic
GTGTACGAGGTAAAATCTTG+AGG 0.588878 2:-83717510 None:intergenic
TTAGCTGCCAAGGATCCTGC+AGG 0.589398 2:+83716878 MsG0280011421.01.T01:CDS
TGTTGATTGTGCTTTAGAAG+AGG 0.591845 2:+83716059 MsG0280011421.01.T01:CDS
AGTTGCATAGGTTCAAAAGA+TGG 0.595184 2:-83716174 None:intergenic
AAGAAAGGCACAGGAAAGCG+AGG 0.597405 2:+83717535 MsG0280011421.01.T01:CDS
ATTCAATTTCACGGTGTGCG+AGG 0.603777 2:+83716574 MsG0280011421.01.T01:CDS
GGATTCAGTTCCTACAACAA+CGG 0.610717 2:+83717318 MsG0280011421.01.T01:CDS
TTGCAAAGCTCCATTGGTGT+CGG 0.612951 2:-83717070 None:intergenic
CATCCAGTTACAGAATGTAT+CGG 0.613346 2:+83716829 MsG0280011421.01.T01:intron
CGTACACCAAAGAAAGGCAC+AGG 0.614419 2:+83717526 MsG0280011421.01.T01:CDS
TTGTCTTTAGAACAAGAGCA+TGG 0.647443 2:+83716989 MsG0280011421.01.T01:CDS
AGGAAACAGAAGGCAGCTCA+CGG 0.651052 2:+83716594 MsG0280011421.01.T01:CDS
CATGTCTGATGATCAAAGAG+AGG 0.654475 2:+83720820 MsG0280011421.01.T01:CDS
TTAATGCATCAAGAAAGCAA+TGG 0.656636 2:+83717211 MsG0280011421.01.T01:CDS
CTTTAGAAGAGGCCTCAAGA+CGG 0.657201 2:+83716070 MsG0280011421.01.T01:CDS
ATCAGAACCTTCCAACCATG+TGG 0.673190 2:+83717243 MsG0280011421.01.T01:CDS
TATCCTTCACATGTTCCACA+TGG 0.679903 2:-83717258 None:intergenic
AAGCACAATCAACAGCATGA+CGG 0.680843 2:-83716050 None:intergenic
ATTCAATTAGTGTCCCAAAG+CGG 0.690314 2:-83717360 None:intergenic
ACGGTGTGCGAGGAAACAGA+AGG 0.696717 2:+83716584 MsG0280011421.01.T01:CDS
ACTGTGTGGCACGAAACGGA+AGG 0.698523 2:+83716668 MsG0280011421.01.T01:CDS
TACGAGGTAAAATCTTGAGG+CGG 0.701465 2:-83717507 None:intergenic
TCTTTAGAACAAGAGCATGG+TGG 0.720352 2:+83716992 MsG0280011421.01.T01:CDS
GATGCATTAAACCCAAACCA+GGG 0.728930 2:-83717198 None:intergenic
GATAAATCAACTTCACTGTG+TGG 0.756046 2:+83716654 MsG0280011421.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGATTATCTAAATTATTT+AGG - Chr2:83720584-83720603 None:intergenic 10.0%
!!! GTTTTTTATTAGTTATTTTA+CGG + Chr2:83718576-83718595 MsG0280011421.01.T01:intron 10.0%
!! AAAAAAAAAAAAAATCGGAA+AGG - Chr2:83719015-83719034 None:intergenic 15.0%
!! AAAAAAAAAAAAGATAAGGA+AGG - Chr2:83719757-83719776 None:intergenic 15.0%
!! GAAGAAAAAAAAAAAAGATA+AGG - Chr2:83719761-83719780 None:intergenic 15.0%
!! GATTAAATTAGTGAAATTAT+TGG + Chr2:83719327-83719346 MsG0280011421.01.T01:intron 15.0%
!! TAGAATGAAATATAAGTTTA+AGG + Chr2:83718194-83718213 MsG0280011421.01.T01:intron 15.0%
!! TATATATATATATATACAGG+TGG - Chr2:83719436-83719455 None:intergenic 15.0%
!! TTTATATTTAAATTTGTCAC+AGG + Chr2:83721424-83721443 MsG0280011421.01.T01:intron 15.0%
!!! ATGTATATAGAAATCTTTTT+GGG + Chr2:83717730-83717749 MsG0280011421.01.T01:intron 15.0%
!!! ATGTATTTACTATTTTATAC+AGG + Chr2:83720230-83720249 MsG0280011421.01.T01:intron 15.0%
!!! ATTTTCTTATATATCTCTTT+TGG + Chr2:83721279-83721298 MsG0280011421.01.T01:intron 15.0%
!!! TATTTTCAAAGTATATGATT+CGG + Chr2:83720734-83720753 MsG0280011421.01.T01:intron 15.0%
!!! TTAATGGATTATTTTAAGTT+GGG - Chr2:83719097-83719116 None:intergenic 15.0%
!!! TTTAATGGATTATTTTAAGT+TGG - Chr2:83719098-83719117 None:intergenic 15.0%
!!! TTTTATTCTTTATTAGTGTT+TGG + Chr2:83720532-83720551 MsG0280011421.01.T01:intron 15.0%
!!! TTTTATTGGCTTTTATTTAA+TGG - Chr2:83721084-83721103 None:intergenic 15.0%
!!! TTTTTAAGAAAATGGTATAT+TGG - Chr2:83720139-83720158 None:intergenic 15.0%
!!! TTTTTTTATTCTTTGGTTAT+TGG + Chr2:83718388-83718407 MsG0280011421.01.T01:intron 15.0%
!!! TTTTTTTGTTATAATTGAGT+CGG - Chr2:83720071-83720090 None:intergenic 15.0%
!! AAATGACAATCTTTGTTAAT+TGG - Chr2:83719046-83719065 None:intergenic 20.0%
!! ATCATAAATTAGAAGATTTC+AGG + Chr2:83720598-83720617 MsG0280011421.01.T01:intron 20.0%
!! ATTATTGGTATTTATTACTC+AGG + Chr2:83719342-83719361 MsG0280011421.01.T01:intron 20.0%
!! ATTCCATTTAATTATGATCA+TGG + Chr2:83717762-83717781 MsG0280011421.01.T01:intron 20.0%
!! ATTGAATTGAATTGAATTGA+TGG + Chr2:83719651-83719670 MsG0280011421.01.T01:intron 20.0%
!! CCAAAGAATAAAAAAAATGT+TGG - Chr2:83718384-83718403 None:intergenic 20.0%
!! GAAATGAAATATTCGTATAT+AGG - Chr2:83721062-83721081 None:intergenic 20.0%
!! TATCATTATCTCATGTTTAA+TGG - Chr2:83719113-83719132 None:intergenic 20.0%
!! TATCCATGATCATAATTAAA+TGG - Chr2:83717768-83717787 None:intergenic 20.0%
!! TATGTTTACATTACATAAAG+TGG - Chr2:83718786-83718805 None:intergenic 20.0%
!! TGAAATCAACTATAAAATGA+TGG - Chr2:83719296-83719315 None:intergenic 20.0%
!! TTACATAAAGTGGTATTAAT+TGG - Chr2:83718776-83718795 None:intergenic 20.0%
!! TTGAATTGAATTGAATTGAT+GGG + Chr2:83719652-83719671 MsG0280011421.01.T01:intron 20.0%
!!! AACAAAGTTTGTTTGATAAT+CGG + Chr2:83718825-83718844 MsG0280011421.01.T01:intron 20.0%
!!! AACCATATTAATAGGTTTTT+TGG - Chr2:83718939-83718958 None:intergenic 20.0%
!!! ACCATATTAATAGGTTTTTT+GGG - Chr2:83718938-83718957 None:intergenic 20.0%
!!! ATAACTTTTAAAATGTGACT+AGG - Chr2:83717906-83717925 None:intergenic 20.0%
!!! ATCTTTGGTCATATTTTATT+AGG + Chr2:83718882-83718901 MsG0280011421.01.T01:intron 20.0%
!!! CCAACATTTTTTTTATTCTT+TGG + Chr2:83718381-83718400 MsG0280011421.01.T01:intron 20.0%
!!! CTAGAAAAACAGAATTTTTA+CGG - Chr2:83716961-83716980 None:intergenic 20.0%
!!! GATGTATATAGAAATCTTTT+TGG + Chr2:83717729-83717748 MsG0280011421.01.T01:intron 20.0%
!!! GTATATGGATCTTATATTTT+AGG + Chr2:83718451-83718470 MsG0280011421.01.T01:intron 20.0%
!!! GTTCTTTCTAATTGTAATTT+TGG + Chr2:83721380-83721399 MsG0280011421.01.T01:intron 20.0%
!!! GTTGGACTTATTAAATTTTT+TGG + Chr2:83718034-83718053 MsG0280011421.01.T01:intron 20.0%
!!! TAAAATTGTTTGCTATTACA+TGG + Chr2:83718285-83718304 MsG0280011421.01.T01:intron 20.0%
!!! TATGATCATGGATATATTTT+GGG + Chr2:83717774-83717793 MsG0280011421.01.T01:intron 20.0%
!!! TTATGATCATGGATATATTT+TGG + Chr2:83717773-83717792 MsG0280011421.01.T01:intron 20.0%
!!! TTTGAATTTTAAAGACTTTG+TGG + Chr2:83720420-83720439 MsG0280011421.01.T01:CDS 20.0%
!!! TTTTTTGTTATAATTGAGTC+GGG - Chr2:83720070-83720089 None:intergenic 20.0%
!!! TTTTTTTGAAGAAACTCTTT+TGG + Chr2:83721310-83721329 MsG0280011421.01.T01:intron 20.0%
! AAAATGCATTGTAATATGCA+GGG + Chr2:83718116-83718135 MsG0280011421.01.T01:intron 25.0%
! AAGCTAATACAAAAATTGAG+TGG + Chr2:83717693-83717712 MsG0280011421.01.T01:intron 25.0%
! ACAAAACATAGAGATATCTT+TGG + Chr2:83718867-83718886 MsG0280011421.01.T01:intron 25.0%
! ACCCAAAAAACCTATTAATA+TGG + Chr2:83718934-83718953 MsG0280011421.01.T01:intron 25.0%
! AGAAGAATTGAAATTAGAGT+AGG - Chr2:83719610-83719629 None:intergenic 25.0%
! AGTATATCAAACTCAACATA+GGG - Chr2:83720969-83720988 None:intergenic 25.0%
! ATTCTTTATTAGTGTTTGGA+TGG + Chr2:83720536-83720555 MsG0280011421.01.T01:intron 25.0%
! ATTTAATAAGTCCAACAATG+CGG - Chr2:83718030-83718049 None:intergenic 25.0%
! CAAAAAAGAAAAAAGTTCTG+TGG + Chr2:83717567-83717586 MsG0280011421.01.T01:intron 25.0%
! CTGATGATAATTCAATTTCA+CGG + Chr2:83716565-83716584 MsG0280011421.01.T01:CDS 25.0%
! GTATAAGTATTTGACAATCA+AGG + Chr2:83718218-83718237 MsG0280011421.01.T01:intron 25.0%
! TAAGCAATCAATTTAGTCAT+TGG - Chr2:83718628-83718647 None:intergenic 25.0%
! TAGATAGTTCGCAATATATA+TGG - Chr2:83718429-83718448 None:intergenic 25.0%
! TAGTATATCAAACTCAACAT+AGG - Chr2:83720970-83720989 None:intergenic 25.0%
! TATACATTTATGAATCGTAG+CGG + Chr2:83718711-83718730 MsG0280011421.01.T01:intron 25.0%
! TATATATTGCGAACTATCTA+AGG + Chr2:83718429-83718448 MsG0280011421.01.T01:intron 25.0%
! TGAATTGAATTGAATTGATG+GGG + Chr2:83719653-83719672 MsG0280011421.01.T01:intron 25.0%
! TGATTTATCATCAGCAATTT+GGG - Chr2:83716643-83716662 None:intergenic 25.0%
! TGTACTAAATGCAGATAAAA+AGG - Chr2:83720446-83720465 None:intergenic 25.0%
! TTCATTTATGTGAATTGTTC+AGG + Chr2:83720664-83720683 MsG0280011421.01.T01:intron 25.0%
! TTGAGTTATTACCAGAAATT+TGG - Chr2:83716730-83716749 None:intergenic 25.0%
! TTGATTTATCATCAGCAATT+TGG - Chr2:83716644-83716663 None:intergenic 25.0%
! TTTACGTCAACCATATTAAT+AGG - Chr2:83718947-83718966 None:intergenic 25.0%
!! AAGAATAAAATCTGAAGCAA+TGG - Chr2:83720522-83720541 None:intergenic 25.0%
!! AAGATATCTCTATGTTTTGT+AGG - Chr2:83718867-83718886 None:intergenic 25.0%
!! ATTACAATGCATTTTCTTCA+TGG - Chr2:83718111-83718130 None:intergenic 25.0%
!! GTGTGGAAAAAAGTTTTTAT+TGG - Chr2:83721098-83721117 None:intergenic 25.0%
!! TACAGAAGCATATAGTTATT+TGG - Chr2:83720851-83720870 None:intergenic 25.0%
!!! AATTTTTTGGTTGTACCTAT+AGG + Chr2:83718047-83718066 MsG0280011421.01.T01:intron 25.0%
!!! ATGGATCTTATATTTTAGGA+GGG + Chr2:83718455-83718474 MsG0280011421.01.T01:intron 25.0%
!!! ATTTTGATGAGCTATTGATT+TGG + Chr2:83717665-83717684 MsG0280011421.01.T01:intron 25.0%
!!! TACTCTGAAATTTACAAACT+TGG + Chr2:83717297-83717316 MsG0280011421.01.T01:CDS 25.0%
!!! TATGGATCTTATATTTTAGG+AGG + Chr2:83718454-83718473 MsG0280011421.01.T01:intron 25.0%
!!! TTTTTGTTATAATTGAGTCG+GGG - Chr2:83720069-83720088 None:intergenic 25.0%
AAAATGGTATATTGGAACAG+TGG - Chr2:83720131-83720150 None:intergenic 30.0%
AAAGTTCATCTCTTTCATTC+TGG - Chr2:83717159-83717178 None:intergenic 30.0%
AAATGCAGTAATCAAAACCT+TGG - Chr2:83717882-83717901 None:intergenic 30.0%
AAATGCATTGTAATATGCAG+GGG + Chr2:83718117-83718136 MsG0280011421.01.T01:intron 30.0%
AATACTTGTTCTGTATTCCA+AGG + Chr2:83717862-83717881 MsG0280011421.01.T01:intron 30.0%
AATCATTTATGTATGTCCTG+TGG + Chr2:83719730-83719749 MsG0280011421.01.T01:intron 30.0%
AATTGTTCAGGCCTTTAATT+AGG + Chr2:83720676-83720695 MsG0280011421.01.T01:intron 30.0%
AATTTCAGAGTAAGAGAAGT+CGG - Chr2:83717289-83717308 None:intergenic 30.0%
ACAAAATTGACAAGTTGCAT+AGG - Chr2:83716189-83716208 None:intergenic 30.0%
AGAATTGAAATTAGAGTAGG+AGG - Chr2:83719607-83719626 None:intergenic 30.0%
AGCTTTGCAATGATTCTTAT+TGG + Chr2:83717083-83717102 MsG0280011421.01.T01:CDS 30.0%
AGTCTATCAAATTCAGTAAG+TGG - Chr2:83716231-83716250 None:intergenic 30.0%
ATATCGTTCAAAAACAACTC+TGG - Chr2:83717419-83717438 None:intergenic 30.0%
ATATGGAAATTCTGCCTATA+AGG + Chr2:83716352-83716371 MsG0280011421.01.T01:CDS 30.0%
ATTGAGATAGTTGGATTCAA+AGG - Chr2:83719509-83719528 None:intergenic 30.0%
ATTGTTCAGGCCTTTAATTA+GGG + Chr2:83720677-83720696 MsG0280011421.01.T01:intron 30.0%
ATTTGATTCAGTTTCTCAAC+AGG + Chr2:83719837-83719856 MsG0280011421.01.T01:intron 30.0%
CAGTGCTTAAATAAATGTGT+TGG + Chr2:83720092-83720111 MsG0280011421.01.T01:intron 30.0%
CTATAAGTACCCCTAATTAA+AGG - Chr2:83720690-83720709 None:intergenic 30.0%
CTGGTAATAACTCAAATTCA+TGG + Chr2:83716735-83716754 MsG0280011421.01.T01:intron 30.0%
GAAAAACCTGATATGATATG+AGG - Chr2:83719540-83719559 None:intergenic 30.0%
GAAAATGCATTGTAATATGC+AGG + Chr2:83718115-83718134 MsG0280011421.01.T01:intron 30.0%
GAATTGAAATTAGAGTAGGA+GGG - Chr2:83719606-83719625 None:intergenic 30.0%
GACATTGGATGATTTCATTA+AGG + Chr2:83721249-83721268 MsG0280011421.01.T01:CDS 30.0%
GATATTTACATGCAAGAGAA+AGG - Chr2:83718320-83718339 None:intergenic 30.0%
GCTAACTCAATATGATATTG+AGG + Chr2:83719690-83719709 MsG0280011421.01.T01:intron 30.0%
TAACAATTGATGCACCTTAA+TGG - Chr2:83720934-83720953 None:intergenic 30.0%
TAACATAAGCAATCAATGCA+AGG - Chr2:83720173-83720192 None:intergenic 30.0%
TAGCAAGTAAGTTTCCATTA+AGG + Chr2:83720917-83720936 MsG0280011421.01.T01:intron 30.0%
TATGGAAATTCTGCCTATAA+GGG + Chr2:83716353-83716372 MsG0280011421.01.T01:CDS 30.0%
TCAGAATTTGAAAAGTTCAC+CGG + Chr2:83716935-83716954 MsG0280011421.01.T01:CDS 30.0%
TTAAATTTGTCACAGGTTCT+TGG + Chr2:83721431-83721450 MsG0280011421.01.T01:intron 30.0%
TTAAGCATTTAGCAACACAA+GGG - Chr2:83719152-83719171 None:intergenic 30.0%
TTAATGCATCAAGAAAGCAA+TGG + Chr2:83717211-83717230 MsG0280011421.01.T01:CDS 30.0%
! AAAAACAGAATTTTTACGGC+CGG - Chr2:83716957-83716976 None:intergenic 30.0%
! AAAACGTACGTTCAACTTTT+TGG - Chr2:83720483-83720502 None:intergenic 30.0%
! AAAGAAGTATATCATGTCAC+TGG - Chr2:83716915-83716934 None:intergenic 30.0%
! AATTCAAAGCATTTCTGAAG+AGG + Chr2:83717117-83717136 MsG0280011421.01.T01:CDS 30.0%
! TACCAGAAATTTGGTAACTA+CGG - Chr2:83716721-83716740 None:intergenic 30.0%
! TTACTGTTCTTTGATTTCTC+AGG + Chr2:83721174-83721193 MsG0280011421.01.T01:intron 30.0%
!! GAAGTTCTAAAAGATTTGTC+TGG + Chr2:83720791-83720810 MsG0280011421.01.T01:CDS 30.0%
!! TTTTTGTTGTAGAATGTGTG+AGG - Chr2:83718742-83718761 None:intergenic 30.0%
!!! AATTCTGTTTTTCTAGAGCA+TGG + Chr2:83716965-83716984 MsG0280011421.01.T01:CDS 30.0%
!!! CTAGTACTGTTTTTTAGAGA+CGG - Chr2:83720336-83720355 None:intergenic 30.0%
!!! TTTTTTTTTGTTTACCCTCC+CGG + Chr2:83719204-83719223 MsG0280011421.01.T01:intron 30.0%
AAGAACTCCTGGAATCTAAA+GGG + Chr2:83716519-83716538 MsG0280011421.01.T01:CDS 35.0%
AATAACTCAAATTCATGGCG+AGG + Chr2:83716740-83716759 MsG0280011421.01.T01:intron 35.0%
ACTTCTGTGAGAATACTTCA+TGG - Chr2:83716428-83716447 None:intergenic 35.0%
AGGTGTCTTTCAAAGACATA+TGG + Chr2:83720769-83720788 MsG0280011421.01.T01:intron 35.0%
AGTTGCATAGGTTCAAAAGA+TGG - Chr2:83716177-83716196 None:intergenic 35.0%
ATACATTCTGTAACTGGATG+TGG - Chr2:83716829-83716848 None:intergenic 35.0%
ATACTCACCACTAATTGTCA+AGG - Chr2:83717612-83717631 None:intergenic 35.0%
ATTCAATTAGTGTCCCAAAG+CGG - Chr2:83717363-83717382 None:intergenic 35.0%
ATTCTTGAAAGGAGACCTAT+AGG - Chr2:83718065-83718084 None:intergenic 35.0%
CAACTTGACAGAAATGCTAA+AGG + Chr2:83719889-83719908 MsG0280011421.01.T01:CDS 35.0%
CAAGAAAGCAATGGAAATCT+TGG + Chr2:83717220-83717239 MsG0280011421.01.T01:CDS 35.0%
CACGTTCTCCTAAAATTAGA+GGG + Chr2:83718906-83718925 MsG0280011421.01.T01:intron 35.0%
CATCCAGTTACAGAATGTAT+CGG + Chr2:83716829-83716848 MsG0280011421.01.T01:intron 35.0%
CTGGAGAGAAATGAGATATT+TGG + Chr2:83719229-83719248 MsG0280011421.01.T01:intron 35.0%
CTTCTGTGAGAATACTTCAT+GGG - Chr2:83716427-83716446 None:intergenic 35.0%
GAGATGAGAATTGAGATAGT+TGG - Chr2:83719518-83719537 None:intergenic 35.0%
GATAAATCAACTTCACTGTG+TGG + Chr2:83716654-83716673 MsG0280011421.01.T01:CDS 35.0%
GCATGAACGAACATAAACTT+AGG + Chr2:83718252-83718271 MsG0280011421.01.T01:intron 35.0%
GTGTATGTTGTGCTTGAAAT+GGG - Chr2:83717981-83718000 None:intergenic 35.0%
GTTAAGCATTTAGCAACACA+AGG - Chr2:83719153-83719172 None:intergenic 35.0%
GTTTCCAGTTTGGGAATTAT+TGG - Chr2:83716807-83716826 None:intergenic 35.0%
GTTTGTGTACTTATTTGCAG+AGG + Chr2:83720377-83720396 MsG0280011421.01.T01:intron 35.0%
TATTTATTACTCAGGACAGG+AGG + Chr2:83719350-83719369 MsG0280011421.01.T01:intron 35.0%
TCACGTTCTCCTAAAATTAG+AGG + Chr2:83718905-83718924 MsG0280011421.01.T01:intron 35.0%
TCATCTCCTCATATCATATC+AGG + Chr2:83719531-83719550 MsG0280011421.01.T01:intron 35.0%
TCTCAGAATATGAAGCAAAC+TGG + Chr2:83716459-83716478 MsG0280011421.01.T01:CDS 35.0%
TCTCGCAACAAATTCTTGAA+AGG - Chr2:83718076-83718095 None:intergenic 35.0%
TCTGCATTTAGTACAAAAGC+TGG + Chr2:83720451-83720470 MsG0280011421.01.T01:CDS 35.0%
TGACATGAAAGTAGTACGTT+TGG + Chr2:83719385-83719404 MsG0280011421.01.T01:intron 35.0%
TGATATGATACCTGAGAAAG+TGG - Chr2:83719964-83719983 None:intergenic 35.0%
TGGTATTTATTACTCAGGAC+AGG + Chr2:83719347-83719366 MsG0280011421.01.T01:intron 35.0%
TGTGTATGTTGTGCTTGAAA+TGG - Chr2:83717982-83718001 None:intergenic 35.0%
TGTTATGAATCCACTTTCTC+AGG + Chr2:83719951-83719970 MsG0280011421.01.T01:CDS 35.0%
TGTTCCAATAATTCCCAAAC+TGG + Chr2:83716800-83716819 MsG0280011421.01.T01:intron 35.0%
TTCCGTAGTTACCAAATTTC+TGG + Chr2:83716716-83716735 MsG0280011421.01.T01:CDS 35.0%
TTGATTTCTCAGGAAGTCTT+GGG + Chr2:83721184-83721203 MsG0280011421.01.T01:intron 35.0%
TTGTTCAGGCCTTTAATTAG+GGG + Chr2:83720678-83720697 MsG0280011421.01.T01:intron 35.0%
! AAAAGACTGCTACTTGACAT+TGG + Chr2:83721234-83721253 MsG0280011421.01.T01:CDS 35.0%
! AGTGGATTCATAACAAACTC+AGG - Chr2:83719946-83719965 None:intergenic 35.0%
! GCTGGAAAGTATAGCATATT+TGG + Chr2:83717466-83717485 MsG0280011421.01.T01:CDS 35.0%
! GGTCTTAACCCTCTAATTTT+AGG - Chr2:83718917-83718936 None:intergenic 35.0%
! GTATATGATTCGGATCGTAA+TGG + Chr2:83720744-83720763 MsG0280011421.01.T01:intron 35.0%
! TGCGAACTATCTAAGGTATA+TGG + Chr2:83718436-83718455 MsG0280011421.01.T01:intron 35.0%
! TTATCATCAGCCTTCTTTTC+TGG - Chr2:83716555-83716574 None:intergenic 35.0%
! TTTGATTTCTCAGGAAGTCT+TGG + Chr2:83721183-83721202 MsG0280011421.01.T01:intron 35.0%
!! CATCCATTTTTACTCCAGAA+TGG - Chr2:83721457-83721476 None:intergenic 35.0%
!! TGTTGATTGTGCTTTAGAAG+AGG + Chr2:83716059-83716078 MsG0280011421.01.T01:CDS 35.0%
!! TTGTCTTTAGAACAAGAGCA+TGG + Chr2:83716989-83717008 MsG0280011421.01.T01:CDS 35.0%
!!! TACTGTTTTTTAGAGACGGA+TGG - Chr2:83720332-83720351 None:intergenic 35.0%
AAAAAGTCCCTTCCTTCCTA+AGG + Chr2:83719471-83719490 MsG0280011421.01.T01:intron 40.0%
AAAAGATAAGGAAGGACCAC+AGG - Chr2:83719749-83719768 None:intergenic 40.0%
AAGCACAATCAACAGCATGA+CGG - Chr2:83716053-83716072 None:intergenic 40.0%
ACATTTATGAATCGTAGCGG+CGG + Chr2:83718714-83718733 MsG0280011421.01.T01:intron 40.0%
ACGGATCTCAACAAGATCTT+TGG + Chr2:83717337-83717356 MsG0280011421.01.T01:CDS 40.0%
AGAAGATGTCCACTGTAAGT+AGG + Chr2:83720195-83720214 MsG0280011421.01.T01:intron 40.0%
AGGCGGTAACTTTGTAATGA+AGG - Chr2:83717493-83717512 None:intergenic 40.0%
AGGTTACTCAAGATGGTTGA+TGG + Chr2:83720397-83720416 MsG0280011421.01.T01:CDS 40.0%
ATCTCATTTCTCTCCAGAAC+CGG - Chr2:83719226-83719245 None:intergenic 40.0%
CATCAGCAATTTGGGAATGA+TGG - Chr2:83716635-83716654 None:intergenic 40.0%
CATGTCTGATGATCAAAGAG+AGG + Chr2:83720820-83720839 MsG0280011421.01.T01:CDS 40.0%
CATTGTAATATGCAGGGGTT+GGG + Chr2:83718122-83718141 MsG0280011421.01.T01:intron 40.0%
CGAATACAGCACAACTGAAA+AGG - Chr2:83721124-83721143 None:intergenic 40.0%
CGAATGTATGCCAGAAAAGA+AGG + Chr2:83716542-83716561 MsG0280011421.01.T01:CDS 40.0%
CTAACTTCAAACCGCATTGT+TGG + Chr2:83718016-83718035 MsG0280011421.01.T01:intron 40.0%
CTACCGATACATTCTGTAAC+TGG - Chr2:83716835-83716854 None:intergenic 40.0%
CTGAGTTTGCAATGCTTGAT+CGG + Chr2:83716316-83716335 MsG0280011421.01.T01:CDS 40.0%
CTTTCTTGTCCTTGTATGAC+CGG + Chr2:83716105-83716124 MsG0280011421.01.T01:CDS 40.0%
GAAGAACTCCTGGAATCTAA+AGG + Chr2:83716518-83716537 MsG0280011421.01.T01:CDS 40.0%
GAAGATGTCCACTGTAAGTA+GGG + Chr2:83720196-83720215 MsG0280011421.01.T01:intron 40.0%
GAATCATTGCAAAGCTCCAT+TGG - Chr2:83717079-83717098 None:intergenic 40.0%
GACAATCAAGGAAAAGTCCT+CGG + Chr2:83718230-83718249 MsG0280011421.01.T01:intron 40.0%
GATGCATTAAACCCAAACCA+GGG - Chr2:83717201-83717220 None:intergenic 40.0%
GGATTCAGTTCCTACAACAA+CGG + Chr2:83717318-83717337 MsG0280011421.01.T01:CDS 40.0%
GTGTACGAGGTAAAATCTTG+AGG - Chr2:83717513-83717532 None:intergenic 40.0%
GTTAATTGTGTCTCCAGCTT+AGG - Chr2:83716141-83716160 None:intergenic 40.0%
TAATGTCTGAGAAGAACTCC+TGG + Chr2:83716508-83716527 MsG0280011421.01.T01:CDS 40.0%
TACGAGGTAAAATCTTGAGG+CGG - Chr2:83717510-83717529 None:intergenic 40.0%
TATCCTTCACATGTTCCACA+TGG - Chr2:83717261-83717280 None:intergenic 40.0%
TCGGTTGTTTGAGAGTGATA+TGG + Chr2:83716335-83716354 MsG0280011421.01.T01:CDS 40.0%
TGATGCATTAAACCCAAACC+AGG - Chr2:83717202-83717221 None:intergenic 40.0%
TTACCTCGTACACCAAAGAA+AGG + Chr2:83717520-83717539 MsG0280011421.01.T01:CDS 40.0%
TTGGATGCCTTGACAATTAG+TGG + Chr2:83717602-83717621 MsG0280011421.01.T01:intron 40.0%
TTGTTGAGATCCGTTGTTGT+AGG - Chr2:83717331-83717350 None:intergenic 40.0%
TTTGCAGAGGTTACTCAAGA+TGG + Chr2:83720390-83720409 MsG0280011421.01.T01:intron 40.0%
! TGATTCGGATCGTAATGGAA+AGG + Chr2:83720749-83720768 MsG0280011421.01.T01:intron 40.0%
! TTAGGAAGGAAGGGACTTTT+TGG - Chr2:83719472-83719491 None:intergenic 40.0%
!! TCTTTAGAACAAGAGCATGG+TGG + Chr2:83716992-83717011 MsG0280011421.01.T01:CDS 40.0%
!! TGGCCATTCTGGAGTAAAAA+TGG + Chr2:83721451-83721470 MsG0280011421.01.T01:CDS 40.0%
AACAAGATCTTTGGCCGCTT+TGG + Chr2:83717346-83717365 MsG0280011421.01.T01:CDS 45.0%
AAGTTCTCGTGCCCAATTGT+CGG + Chr2:83716260-83716279 MsG0280011421.01.T01:CDS 45.0%
ACATGTTCCACATGGTTGGA+AGG - Chr2:83717253-83717272 None:intergenic 45.0%
ACATTCGCCCTTTAGATTCC+AGG - Chr2:83716529-83716548 None:intergenic 45.0%
ACTCAAATTCATGGCGAGGA+AGG + Chr2:83716744-83716763 MsG0280011421.01.T01:intron 45.0%
ACTGGATGTGGTTTCCAGTT+TGG - Chr2:83716817-83716836 None:intergenic 45.0%
AGCGATAGAAAGCCGACAAT+TGG - Chr2:83716275-83716294 None:intergenic 45.0%
ATCAGAACCTTCCAACCATG+TGG + Chr2:83717243-83717262 MsG0280011421.01.T01:CDS 45.0%
ATCCTGCTTCTTTCAGAACC+TGG - Chr2:83721210-83721229 None:intergenic 45.0%
ATTCAATTTCACGGTGTGCG+AGG + Chr2:83716574-83716593 MsG0280011421.01.T01:CDS 45.0%
CAACCATGTGGAACATGTGA+AGG + Chr2:83717255-83717274 MsG0280011421.01.T01:CDS 45.0%
CGGTCATACAAGGACAAGAA+AGG - Chr2:83716107-83716126 None:intergenic 45.0%
CTGGATGTGGTTTCCAGTTT+GGG - Chr2:83716816-83716835 None:intergenic 45.0%
CTTCACATGTTCCACATGGT+TGG - Chr2:83717257-83717276 None:intergenic 45.0%
GCATTGTAATATGCAGGGGT+TGG + Chr2:83718121-83718140 MsG0280011421.01.T01:intron 45.0%
GCGATAGAAAGCCGACAATT+GGG - Chr2:83716274-83716293 None:intergenic 45.0%
GCTGAAATTAGCCCTGGTTT+GGG + Chr2:83717187-83717206 MsG0280011421.01.T01:CDS 45.0%
GTTCAAAAACAACTCTGGCG+CGG - Chr2:83717414-83717433 None:intergenic 45.0%
GTTTATGTTCGTTCATGCCG+AGG - Chr2:83718250-83718269 None:intergenic 45.0%
TATCCTAGCCCTACTTACAG+TGG - Chr2:83720207-83720226 None:intergenic 45.0%
TATGTCAACACCGACACCAA+TGG + Chr2:83717060-83717079 MsG0280011421.01.T01:CDS 45.0%
TCAACTATGCTTAGCTGCCA+AGG + Chr2:83716868-83716887 MsG0280011421.01.T01:CDS 45.0%
TCGGCTTTCTATCGCTCAAA+AGG + Chr2:83716279-83716298 MsG0280011421.01.T01:CDS 45.0%
TCTCATTTCTCTCCAGAACC+GGG - Chr2:83719225-83719244 None:intergenic 45.0%
TGCTGAAATTAGCCCTGGTT+TGG + Chr2:83717186-83717205 MsG0280011421.01.T01:CDS 45.0%
TGTAGCAGCAGCTTCTATAG+AGG - Chr2:83717035-83717054 None:intergenic 45.0%
TTGCAAAGCTCCATTGGTGT+CGG - Chr2:83717073-83717092 None:intergenic 45.0%
TTTAGAAGAGGCCTCAAGAC+GGG + Chr2:83716071-83716090 MsG0280011421.01.T01:CDS 45.0%
! ACAAGATCTTTGGCCGCTTT+GGG + Chr2:83717347-83717366 MsG0280011421.01.T01:CDS 45.0%
! ATTGTCAAGGCATCCAACTG+TGG - Chr2:83717599-83717618 None:intergenic 45.0%
! CACAACTGAAAAGGTGTGTG+TGG - Chr2:83721115-83721134 None:intergenic 45.0%
! CGATCAAGCATTGCAAACTC+AGG - Chr2:83716318-83716337 None:intergenic 45.0%
! CTTTAGAAGAGGCCTCAAGA+CGG + Chr2:83716070-83716089 MsG0280011421.01.T01:CDS 45.0%
!! CACTGCTGTTTCTCCCTTAT+AGG - Chr2:83716369-83716388 None:intergenic 45.0%
!! GAAACTGCTTTTAGCAGTGC+TGG + Chr2:83717448-83717467 MsG0280011421.01.T01:CDS 45.0%
!! ATATATATATATATATATAC+AGG - Chr2:83719439-83719458 None:intergenic 5.0%
!! TCATAAAAAAAAAAAAAAAT+CGG - Chr2:83719020-83719039 None:intergenic 5.0%
!!! ATTTTAAATAATTAATATAG+AGG + Chr2:83718483-83718502 MsG0280011421.01.T01:intron 5.0%
!!! TATTATTTTTTTTTTTTTGA+AGG + Chr2:83717923-83717942 MsG0280011421.01.T01:intron 5.0%
!!! TTATTTTTTTTTTAAGAAAA+TGG - Chr2:83720147-83720166 None:intergenic 5.0%
AACGCTTCTCCGGTCATACA+AGG - Chr2:83716117-83716136 None:intergenic 50.0%
AAGGTGAGTGCAGTGTCCTT+AGG - Chr2:83719490-83719509 None:intergenic 50.0%
ACTTTCTCCTGCAGGATCCT+TGG - Chr2:83716888-83716907 None:intergenic 50.0%
AGGAAACAGAAGGCAGCTCA+CGG + Chr2:83716594-83716613 MsG0280011421.01.T01:CDS 50.0%
ATGGCGAGGAAGGAAACGAA+AGG + Chr2:83716754-83716773 MsG0280011421.01.T01:intron 50.0%
ATTTCTCTCCAGAACCGGGA+GGG - Chr2:83719221-83719240 None:intergenic 50.0%
CAGCTTAGGAAACGCTTCTC+CGG - Chr2:83716127-83716146 None:intergenic 50.0%
CGCTTTCCTGTGCCTTTCTT+TGG - Chr2:83717535-83717554 None:intergenic 50.0%
CTGGAGAAACTTTCTCCTGC+AGG - Chr2:83716896-83716915 None:intergenic 50.0%
CTTCACTGTGTGGCACGAAA+CGG + Chr2:83716664-83716683 MsG0280011421.01.T01:CDS 50.0%
GCAGTGTCCTTAGGAAGGAA+GGG - Chr2:83719481-83719500 None:intergenic 50.0%
TCACAGGTTCTTGGCCATTC+TGG + Chr2:83721440-83721459 MsG0280011421.01.T01:intron 50.0%
TGAGTGCAGTGTCCTTAGGA+AGG - Chr2:83719486-83719505 None:intergenic 50.0%
TGCAGTGTCCTTAGGAAGGA+AGG - Chr2:83719482-83719501 None:intergenic 50.0%
TGTCCACTGTAAGTAGGGCT+AGG + Chr2:83720201-83720220 MsG0280011421.01.T01:intron 50.0%
TTTGTTTACCCTCCCGGTTC+TGG + Chr2:83719210-83719229 MsG0280011421.01.T01:intron 50.0%
! AAGAAAGGCACAGGAAAGCG+AGG + Chr2:83717535-83717554 MsG0280011421.01.T01:CDS 50.0%
! CGTACACCAAAGAAAGGCAC+AGG + Chr2:83717526-83717545 MsG0280011421.01.T01:CDS 50.0%
! GTGCCTTTCTTTGGTGTACG+AGG - Chr2:83717526-83717545 None:intergenic 50.0%
ACGGTGTGCGAGGAAACAGA+AGG + Chr2:83716584-83716603 MsG0280011421.01.T01:CDS 55.0%
ACTGTGTGGCACGAAACGGA+AGG + Chr2:83716668-83716687 MsG0280011421.01.T01:CDS 55.0%
CATTTCTCTCCAGAACCGGG+AGG - Chr2:83719222-83719241 None:intergenic 55.0%
CCAGCTGCTGAAATTAGCCC+TGG + Chr2:83717181-83717200 MsG0280011421.01.T01:CDS 55.0%
CCAGGGCTAATTTCAGCAGC+TGG - Chr2:83717184-83717203 None:intergenic 55.0%
GCCAAACTCAACCCGTCTTG+AGG - Chr2:83716085-83716104 None:intergenic 55.0%
TTAGCTGCCAAGGATCCTGC+AGG + Chr2:83716878-83716897 MsG0280011421.01.T01:CDS 55.0%
TTCTCAGGAAGTCTTGGGCC+AGG + Chr2:83721189-83721208 MsG0280011421.01.T01:intron 55.0%
! CAAGAGCATGGTGGTGAGAC+TGG + Chr2:83717001-83717020 MsG0280011421.01.T01:CDS 55.0%
! GTCAAGGCATCCAACTGTGG+CGG - Chr2:83717596-83717615 None:intergenic 55.0%
!! CGGAGAAGCGTTTCCTAAGC+TGG + Chr2:83716125-83716144 MsG0280011421.01.T01:CDS 55.0%
!! GCCTCAAGACGGGTTGAGTT+TGG + Chr2:83716081-83716100 MsG0280011421.01.T01:CDS 55.0%
!! GGCCAGGTTCTGAAAGAAGC+AGG + Chr2:83721205-83721224 MsG0280011421.01.T01:CDS 55.0%
TCTGTGGATGCCGCCACAGT+TGG + Chr2:83717583-83717602 MsG0280011421.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 83716021 83721496 83716021 ID=MsG0280011421.01;Name=MsG0280011421.01
Chr2 mRNA 83716021 83721496 83716021 ID=MsG0280011421.01.T01;Parent=MsG0280011421.01;Name=MsG0280011421.01.T01;_AED=0.41;_eAED=0.42;_QI=0|0|0|1|1|1|7|0|611
Chr2 exon 83716021 83716737 83716021 ID=MsG0280011421.01.T01:exon:3120;Parent=MsG0280011421.01.T01
Chr2 exon 83716836 83717556 83716836 ID=MsG0280011421.01.T01:exon:3121;Parent=MsG0280011421.01.T01
Chr2 exon 83719848 83719972 83719848 ID=MsG0280011421.01.T01:exon:3122;Parent=MsG0280011421.01.T01
Chr2 exon 83720397 83720472 83720397 ID=MsG0280011421.01.T01:exon:3123;Parent=MsG0280011421.01.T01
Chr2 exon 83720771 83720841 83720771 ID=MsG0280011421.01.T01:exon:3124;Parent=MsG0280011421.01.T01
Chr2 exon 83721196 83721270 83721196 ID=MsG0280011421.01.T01:exon:3125;Parent=MsG0280011421.01.T01
Chr2 exon 83721446 83721496 83721446 ID=MsG0280011421.01.T01:exon:3126;Parent=MsG0280011421.01.T01
Chr2 CDS 83716021 83716737 83716021 ID=MsG0280011421.01.T01:cds;Parent=MsG0280011421.01.T01
Chr2 CDS 83716836 83717556 83716836 ID=MsG0280011421.01.T01:cds;Parent=MsG0280011421.01.T01
Chr2 CDS 83719848 83719972 83719848 ID=MsG0280011421.01.T01:cds;Parent=MsG0280011421.01.T01
Chr2 CDS 83720397 83720472 83720397 ID=MsG0280011421.01.T01:cds;Parent=MsG0280011421.01.T01
Chr2 CDS 83720771 83720841 83720771 ID=MsG0280011421.01.T01:cds;Parent=MsG0280011421.01.T01
Chr2 CDS 83721196 83721270 83721196 ID=MsG0280011421.01.T01:cds;Parent=MsG0280011421.01.T01
Chr2 CDS 83721446 83721496 83721446 ID=MsG0280011421.01.T01:cds;Parent=MsG0280011421.01.T01
Gene Sequence

>MsG0280011421.01.T01

ATGGAGAAACAGAATGATTTGGAAAATTTCCGTCATGCTGTTGATTGTGCTTTAGAAGAGGCCTCAAGACGGGTTGAGTTTGGCCTTTCTTGTCCTTGTATGACCGGAGAAGCGTTTCCTAAGCTGGAGACACAATTAACGACTAATGCTGCGCCATCTTTTGAACCTATGCAACTTGTCAATTTTGTCAAATCATTAGCTCAGTCACCACTTACTGAATTTGATAGACTCGAGTTTGTAAGTTCTCGTGCCCAATTGTCGGCTTTCTATCGCTCAAAAGGCTATTCTCAACTGCCTGAGTTTGCAATGCTTGATCGGTTGTTTGAGAGTGATATGGAAATTCTGCCTATAAGGGAGAAACAGCAGTGCGATGATCAAATTAATGAGCAAGTTTTGATGAAAACCCATGAAGTATTCTCACAGAAGTCGCAGCACATCTCTCAGAATATGAAGCAAACTGGCAAAAAGAAGAAACTTTTGTCAGATTTAATGTCTGAGAAGAACTCCTGGAATCTAAAGGGCGAATGTATGCCAGAAAAGAAGGCTGATGATAATTCAATTTCACGGTGTGCGAGGAAACAGAAGGCAGCTCACGGTACTAATGAATATTTCCATCATTCCCAAATTGCTGATGATAAATCAACTTCACTGTGTGGCACGAAACGGAAGGCAGCTTATGATACTTCTGACGATGATTCCGTAGTTACCAAATTTCTGTTACAGAATGTATCGGTAGATGAGATGCAGTCTCAACTATGCTTAGCTGCCAAGGATCCTGCAGGAGAAAGTTTCTCCAGTGACATGATATACTTCTTTTCAGAATTTGAAAAGTTCACCGGCCGTAAAAATTCTGTTTTTCTAGAGCATGGATTGTCTTTAGAACAAGAGCATGGTGGTGAGACTGGAGTAGTAACCTCTATAGAAGCTGCTGCTACATCTTCTATGTCAACACCGACACCAATGGAGCTTTGCAATGATTCTTATTGGACTGATAGAATAATTCAAAGCATTTCTGAAGAGGAGACACTGTTGAAAAACCAGAATGAAAGAGATGAACTTTTGCCAGCTGCTGAAATTAGCCCTGGTTTGGGTTTAATGCATCAAGAAAGCAATGGAAATCTTGGATCAGAACCTTCCAACCATGTGGAACATGTGAAGGATAGTTCTCCGACTTCTCTTACTCTGAAATTTACAAACTTGGATTCAGTTCCTACAACAACGGATCTCAACAAGATCTTTGGCCGCTTTGGGACACTAATTGAATCAAAGACTAAACTTCTCGAGAAGACTAACCGCGCCAGAGTTGTTTTTGAACGATATTGTGATGCAGAAACTGCTTTTAGCAGTGCTGGAAAGTATAGCATATTTGGACCTTCATTACAAAGTTACCGCCTCAAGATTTTACCTCGTACACCAAAGAAAGGCACAGGAAAGCGAGTTTCTCAACAGGAAATAGTGTGTTTGTATGAACGCTTTTGTCAACTTGACAGAAATGCTAAAGGCTTTATTTCATCTGATGAGTTCTTGTCAATTCCTGAGTTTGTTATGAATCCACTTTCTCAGAGGTTACTCAAGATGGTTGATGGTTTGAATTTTAAAGACTTTGTGGCCTTTTTATCTGCATTTAGTACAAAAGCTGGTGTCTTTCAAAGACATATGGAAGTTCTAAAAGATTTGTCTGGTTCATACATGTCTGATGATCAAAGAGAGGAAGTCTTGGGCCAGGTTCTGAAAGAAGCAGGATACTCAAAAGACTGCTACTTGACATTGGATGATTTCATTAAGGTTCTTGGCCATTCTGGAGTAAAAATGGATGTTGAAGTTCCTGTTGATTAA
Protein sequence

>MsG0280011421.01.T01

MEKQNDLENFRHAVDCALEEASRRVEFGLSCPCMTGEAFPKLETQLTTNAAPSFEPMQLVNFVKSLAQSPLTEFDRLEFVSSRAQLSAFYRSKGYSQLPEFAMLDRLFESDMEILPIREKQQCDDQINEQVLMKTHEVFSQKSQHISQNMKQTGKKKKLLSDLMSEKNSWNLKGECMPEKKADDNSISRCARKQKAAHGTNEYFHHSQIADDKSTSLCGTKRKAAYDTSDDDSVVTKFLLQNVSVDEMQSQLCLAAKDPAGESFSSDMIYFFSEFEKFTGRKNSVFLEHGLSLEQEHGGETGVVTSIEAAATSSMSTPTPMELCNDSYWTDRIIQSISEEETLLKNQNERDELLPAAEISPGLGLMHQESNGNLGSEPSNHVEHVKDSSPTSLTLKFTNLDSVPTTTDLNKIFGRFGTLIESKTKLLEKTNRARVVFERYCDAETAFSSAGKYSIFGPSLQSYRLKILPRTPKKGTGKRVSQQEIVCLYERFCQLDRNAKGFISSDEFLSIPEFVMNPLSQRLLKMVDGLNFKDFVAFLSAFSTKAGVFQRHMEVLKDLSGSYMSDDQREEVLGQVLKEAGYSKDCYLTLDDFIKVLGHSGVKMDVEVPVD*