AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012068.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012068.01.T01 MTR_3g013490 82.035 1091 62 6 1 1054 48 1041 0.0 1745
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 197 sgRNAs with CRISPR-Local

Find 476 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCAAACTTCCGTTGATTT+TGG 0.136551 3:+10429373 MsG0380012068.01.T01:CDS
CAGCGGCTTCTAAATCTTTC+TGG 0.143949 3:-10430873 None:intergenic
TTGACATCAATACCATATTT+TGG 0.165689 3:-10428528 None:intergenic
CTTGATGATACATGCAAATT+TGG 0.191245 3:-10434339 None:intergenic
GGAGCAGGATATTCCTATTA+TGG 0.240828 3:+10435815 MsG0380012068.01.T01:CDS
CGATTTAAACGATTTCCTTA+TGG 0.247955 3:+10429768 MsG0380012068.01.T01:CDS
CGAAAACGATACAGAGTATT+TGG 0.259564 3:+10431841 MsG0380012068.01.T01:CDS
TATTATTCTATGTAACAAAA+AGG 0.272842 3:+10432937 MsG0380012068.01.T01:CDS
TAGGACACGCCACCGCTTAC+TGG 0.276194 3:+10432324 MsG0380012068.01.T01:CDS
TGATGCTGAACAACAGTTTC+TGG 0.281290 3:-10432406 None:intergenic
GACATGAAGTGGACCAGATT+TGG 0.281593 3:+10434236 MsG0380012068.01.T01:CDS
CACTTTCCAGAAAGATGATT+TGG 0.286384 3:+10430651 MsG0380012068.01.T01:intron
TGATATTGCTGCTGCATCTT+TGG 0.287454 3:+10432123 MsG0380012068.01.T01:CDS
TTGGCACCTTCTCCAAAATA+TGG 0.294359 3:+10428516 MsG0380012068.01.T01:CDS
TTTACCAGGAAGAATGTTAT+TGG 0.299079 3:+10435894 MsG0380012068.01.T01:intron
TGGCTTCCTTTCAGCAAGTA+TGG 0.301243 3:+10429720 MsG0380012068.01.T01:CDS
AGTTGCCATTTATTCTTATC+TGG 0.303946 3:+10428591 MsG0380012068.01.T01:CDS
GAAGCACTTATAAGGAATTC+TGG 0.304076 3:+10432833 MsG0380012068.01.T01:CDS
CGCTTCCAGATAAGAATAAA+TGG 0.304725 3:-10428596 None:intergenic
GATGAGATTGATTCAAATCT+TGG 0.310989 3:-10429312 None:intergenic
GTCCTATGGTTTAGATTAAT+AGG 0.316144 3:-10432307 None:intergenic
CACTTCATGTCATTTCGATT+TGG 0.325643 3:-10434224 None:intergenic
AGCACAACCATACAAGAATT+TGG 0.330788 3:-10433934 None:intergenic
ACAGAACAATAATCTTATTA+TGG 0.332143 3:+10432429 MsG0380012068.01.T01:CDS
AAAATAAAACTTACATTTCC+AGG 0.335084 3:-10428648 None:intergenic
TGCATGAAATACATTTGAAT+TGG 0.335534 3:-10429848 None:intergenic
GCATTCTGATGATCCTGATT+TGG 0.338169 3:+10430056 MsG0380012068.01.T01:CDS
GCTCCAAAGCACAGGACTTC+AGG 0.343088 3:-10435797 None:intergenic
AGATTTAGAAGCCGCTGGTT+AGG 0.345296 3:+10430879 MsG0380012068.01.T01:CDS
GGGAGTTGGAAGCACTTATA+AGG 0.348188 3:+10432825 MsG0380012068.01.T01:CDS
AGATCATTCACAAAATGTTT+AGG 0.348612 3:-10430090 None:intergenic
GATTTAGAAGCCGCTGGTTA+GGG 0.351442 3:+10430880 MsG0380012068.01.T01:CDS
GGAGTATTTGCGCCCAAATC+AGG 0.351900 3:-10430069 None:intergenic
TTACCTGTTGGTGTTTCCTT+TGG 0.354613 3:+10429814 MsG0380012068.01.T01:CDS
TGTATTGCATTCTCAAGATA+TGG 0.367906 3:+10431721 MsG0380012068.01.T01:CDS
CAGTTTCTGGTACTACATAT+TGG 0.369027 3:-10432393 None:intergenic
ATGAACTGCCTTCCCAAATC+TGG 0.371136 3:-10434249 None:intergenic
AGAGAATGTGGAGGTGAGTC+TGG 0.374621 3:-10430015 None:intergenic
AGCACACGTGAGTGCTCATC+TGG 0.378783 3:-10431536 None:intergenic
GATATTGCTGCTGCATCTTT+GGG 0.379441 3:+10432124 MsG0380012068.01.T01:CDS
TCTGGTGATGAAAATTATAA+TGG 0.381347 3:+10429880 MsG0380012068.01.T01:CDS
GTCAAAGAATGTTTCATATG+AGG 0.387496 3:-10432719 None:intergenic
GAAAAGGAAATTGTCAAAGT+TGG 0.388640 3:+10432540 MsG0380012068.01.T01:CDS
TTTGTTGAGGGCTAAATCAT+TGG 0.392914 3:-10430145 None:intergenic
ACATGAAGTGGACCAGATTT+GGG 0.393615 3:+10434237 MsG0380012068.01.T01:CDS
GCTTGTCTCCCTGGCACACT+TGG 0.394875 3:-10431570 None:intergenic
AAACTCTTCAATGGTTAGTT+CGG 0.401937 3:+10435706 MsG0380012068.01.T01:CDS
CATTCTGATGATCCTGATTT+GGG 0.403110 3:+10430057 MsG0380012068.01.T01:CDS
TCACCTGAAGTCCTGTGCTT+TGG 0.404774 3:+10435794 MsG0380012068.01.T01:CDS
CTTAGTGTTGCTCCATCTCC+TGG 0.409388 3:+10428630 MsG0380012068.01.T01:CDS
GAGAATATGCATTCCATGTC+AGG 0.410864 3:+10429397 MsG0380012068.01.T01:CDS
GGATTCCAAAGTTTCTTGTC+AGG 0.413636 3:+10431477 MsG0380012068.01.T01:CDS
GTTCATCTATTAGAGCAAAA+AGG 0.414060 3:+10432672 MsG0380012068.01.T01:CDS
CCCCTTGAATTTGGTGGAGA+GGG 0.416869 3:-10432878 None:intergenic
ATTGATTCAAATCTTGGGTT+GGG 0.418105 3:-10429306 None:intergenic
TGAGAACTAATGGCACGCTT+GGG 0.419204 3:-10431653 None:intergenic
CATACTTAGCTGAGAACTAA+TGG 0.420888 3:-10431663 None:intergenic
CATAAGGAAATCGTTTAAAT+CGG 0.423048 3:-10429767 None:intergenic
TCAAATGTATTTCATGCAAA+AGG 0.423154 3:+10429853 MsG0380012068.01.T01:CDS
CTAACTGATTGTCTTGCATC+TGG 0.423701 3:+10433987 MsG0380012068.01.T01:CDS
CAAACCGCCAAATTCTTGTA+TGG 0.426416 3:+10433927 MsG0380012068.01.T01:CDS
GAGGATGCCTATGCAGATAT+AGG 0.427049 3:+10429790 MsG0380012068.01.T01:CDS
TTCTTGTATGGTTGTGCTGT+TGG 0.436438 3:+10433939 MsG0380012068.01.T01:CDS
GTGAAGCAGGCACGTCTTGA+GGG 0.440618 3:+10429688 MsG0380012068.01.T01:CDS
CCCGTTAGTCTCTGACTTTG+AGG 0.442259 3:+10431865 MsG0380012068.01.T01:CDS
CGTCTTGAGGGGTTAGAAGA+TGG 0.445068 3:+10429700 MsG0380012068.01.T01:CDS
GCCTCCCTGACAAGAAACTT+TGG 0.447190 3:-10431482 None:intergenic
TTCCCTCTCCACCAAATTCA+AGG 0.449689 3:+10432876 MsG0380012068.01.T01:CDS
CGATGAAGAAAGGACTTTGA+TGG 0.450007 3:+10435734 MsG0380012068.01.T01:CDS
GTGGTGTCGAATTAGAGTTT+TGG 0.451197 3:-10432084 None:intergenic
AACATGATCCCAAGTGTGCC+AGG 0.452930 3:+10431561 MsG0380012068.01.T01:CDS
ATGAGATTGATTCAAATCTT+GGG 0.454443 3:-10429311 None:intergenic
TTCCTTCATGTTGTGCAGCA+TGG 0.455314 3:+10435666 MsG0380012068.01.T01:CDS
CTGAGAACTAATGGCACGCT+TGG 0.455473 3:-10431654 None:intergenic
CCTCAAAGTCAGAGACTAAC+GGG 0.459345 3:-10431865 None:intergenic
CATCAAAGTCCTTTCTTCAT+CGG 0.460148 3:-10435733 None:intergenic
TTCAGATTTATCATCAAACT+TGG 0.463314 3:-10429947 None:intergenic
CAAGGGAAGAAGGTGGATAC+AGG 0.464777 3:+10428568 MsG0380012068.01.T01:CDS
GAGAACACAACTTACTTGTC+AGG 0.464798 3:-10434023 None:intergenic
TGTAATGACAAAGCTTTACT+TGG 0.467043 3:-10429346 None:intergenic
CCAGAAAGATGATTTGGCTA+TGG 0.467344 3:+10430657 MsG0380012068.01.T01:intron
AAACTTACATTTCCAGGAGA+TGG 0.468158 3:-10428642 None:intergenic
AGCTATTGTAGTTGAAGAAA+AGG 0.468308 3:+10435758 MsG0380012068.01.T01:CDS
TGTGAAGCAGGCACGTCTTG+AGG 0.468605 3:+10429687 MsG0380012068.01.T01:CDS
TGGAGGAGCTTCATCAGAAA+AGG 0.468801 3:+10432524 MsG0380012068.01.T01:CDS
CCTTTCATGTGTCAGTTCTG+AGG 0.470343 3:-10432278 None:intergenic
TGTAAGAAAGCTTGTCTCCC+TGG 0.472081 3:-10431579 None:intergenic
AAGGTAACTTACTTTGTTGA+GGG 0.473392 3:-10430157 None:intergenic
GGTAGAGAGTTCCTCCTCAC+TGG 0.479205 3:+10432782 MsG0380012068.01.T01:CDS
AGCACACATGAGCTCTCATC+AGG 0.482011 3:-10431620 None:intergenic
TCTCCAAAGGAAACACCAAC+AGG 0.484133 3:-10429817 None:intergenic
GAGTGCAATAAATCCGTTGA+TGG 0.489609 3:+10432460 MsG0380012068.01.T01:CDS
CTGCATAGGCATCCTCCATA+AGG 0.490012 3:-10429783 None:intergenic
AAGACTTCGATGTATTATCA+AGG 0.493669 3:+10428550 MsG0380012068.01.T01:CDS
GAAGGTAACTTACTTTGTTG+AGG 0.493701 3:-10430158 None:intergenic
GATTGATTCAAATCTTGGGT+TGG 0.494956 3:-10429307 None:intergenic
CACTTATAAGGAATTCTGGT+GGG 0.498139 3:+10432837 MsG0380012068.01.T01:CDS
AATTGCACTTCGTGTGAAGC+AGG 0.498442 3:+10429675 MsG0380012068.01.T01:CDS
GAAGTCCTGTGCTTTGGAGC+AGG 0.501685 3:+10435800 MsG0380012068.01.T01:CDS
GGGCGTTCAAAACTCTTCAA+TGG 0.504526 3:+10435697 MsG0380012068.01.T01:CDS
AGGACACGCCACCGCTTACT+GGG 0.504530 3:+10432325 MsG0380012068.01.T01:CDS
TGCTGCATCTTTGGGAACAA+AGG 0.507289 3:+10432132 MsG0380012068.01.T01:CDS
GTAAGCGGTGGCGTGTCCTA+TGG 0.507569 3:-10432321 None:intergenic
GAATGCAATACACCCTCATC+GGG 0.510716 3:-10431710 None:intergenic
AGTACATTTCTCAGATAAAG+TGG 0.513126 3:+10432504 MsG0380012068.01.T01:CDS
TATTGCAGCATCTGAAGCAC+TGG 0.515142 3:+10429588 MsG0380012068.01.T01:CDS
GAAGTTTGAAATCAACTTGG+AGG 0.515474 3:+10429975 MsG0380012068.01.T01:CDS
TTTCATGCAAAAGGTGTGTC+TGG 0.517054 3:+10429862 MsG0380012068.01.T01:CDS
GAAATCGTTTAAATCGGAAA+GGG 0.517326 3:-10429761 None:intergenic
GACTTTAACATGTCCATCAA+CGG 0.518768 3:-10432473 None:intergenic
ATGAAGGAATTCATATTTCG+AGG 0.520308 3:+10432761 MsG0380012068.01.T01:CDS
CAAATCGAAATGACATGAAG+TGG 0.524124 3:+10434225 MsG0380012068.01.T01:CDS
GATTATCTAGTCAGAAGGAA+AGG 0.524463 3:+10432804 MsG0380012068.01.T01:CDS
TAGTCAGAAGGAAAGGGAGT+TGG 0.525630 3:+10432811 MsG0380012068.01.T01:CDS
TAACTCATCACTCTTGTCAT+CGG 0.526485 3:-10432251 None:intergenic
TCACTTTGGTTAGTTGAAAG+TGG 0.528202 3:-10432103 None:intergenic
AATATCCTGCTCCAAAGCAC+AGG 0.532381 3:-10435805 None:intergenic
GATGAAGAAAGGACTTTGAT+GGG 0.538503 3:+10435735 MsG0380012068.01.T01:CDS
TTCGGAGCACCGATGAAGAA+AGG 0.538955 3:+10435724 MsG0380012068.01.T01:CDS
CAGAAAGATTTAGAAGCCGC+TGG 0.540602 3:+10430874 MsG0380012068.01.T01:CDS
TTTAAACGATTTCCTTATGG+AGG 0.540705 3:+10429771 MsG0380012068.01.T01:CDS
GAGTTGGCATTATGCTTCAC+GGG 0.541121 3:+10434300 MsG0380012068.01.T01:CDS
GGAAATCGTTTAAATCGGAA+AGG 0.543978 3:-10429762 None:intergenic
CATGTTGTGCAGCATGGAGG+TGG 0.544627 3:+10435672 MsG0380012068.01.T01:CDS
AAATCAACGGAAGTTTGAGC+AGG 0.545564 3:-10429370 None:intergenic
ATGCAGCAGCAATATCACTT+TGG 0.547322 3:-10432117 None:intergenic
ATTATCTAGTCAGAAGGAAA+GGG 0.548027 3:+10432805 MsG0380012068.01.T01:CDS
TCCCCTTGAATTTGGTGGAG+AGG 0.548394 3:-10432879 None:intergenic
ACAGGCATGATTGCCTGACA+TGG 0.552603 3:-10429410 None:intergenic
CTTCAATACTAAGAGTTGAC+TGG 0.553475 3:+10433964 MsG0380012068.01.T01:CDS
AAAGAAGTTTGAAATCAACT+TGG 0.554143 3:+10429972 MsG0380012068.01.T01:CDS
CAAATTTGCATGTATCATCA+AGG 0.554306 3:+10434340 MsG0380012068.01.T01:CDS
AGAATGCAATACACCCTCAT+CGG 0.554727 3:-10431711 None:intergenic
TTCTAAATCTTTCTGGAGCT+AGG 0.556079 3:-10430866 None:intergenic
AGGAAGCTGCAAGCAAGATA+AGG 0.556194 3:-10432915 None:intergenic
TTGTGCAGCATGGAGGTGGA+CGG 0.557743 3:+10435676 MsG0380012068.01.T01:CDS
TCCCTCTCCACCAAATTCAA+GGG 0.559959 3:+10432877 MsG0380012068.01.T01:CDS
CTTGTCTCCCTGGCACACTT+GGG 0.562041 3:-10431569 None:intergenic
TTATTGCAGAGGTGCAATGA+AGG 0.562086 3:+10432745 MsG0380012068.01.T01:CDS
AGAGTTGGCATTATGCTTCA+CGG 0.562215 3:+10434299 MsG0380012068.01.T01:CDS
ACAACCATACAAGAATTTGG+CGG 0.565315 3:-10433931 None:intergenic
GATGTATTATCAAGGGAAGA+AGG 0.567072 3:+10428558 MsG0380012068.01.T01:CDS
CACATTCTCTATGTGGTGAG+AGG 0.568696 3:+10430028 MsG0380012068.01.T01:CDS
TTGCATTCTCAAGATATGGT+TGG 0.569084 3:+10431725 MsG0380012068.01.T01:CDS
TCTACTTACTTCAACTGAGG+TGG 0.569121 3:+10431976 MsG0380012068.01.T01:CDS
AGGTAAGCCTATATCTGCAT+AGG 0.571950 3:-10429797 None:intergenic
TGACAACACATCTTGTTCAC+AGG 0.572843 3:-10429428 None:intergenic
GTTTGAAATCAACTTGGAGG+CGG 0.578963 3:+10429978 MsG0380012068.01.T01:CDS
TGTGCAGCATGGAGGTGGAC+GGG 0.580814 3:+10435677 MsG0380012068.01.T01:CDS
CTCTCACCACATAGAGAATG+TGG 0.581087 3:-10430027 None:intergenic
CAGATTCCATACTTGCTGAA+AGG 0.584618 3:-10429726 None:intergenic
CATATTCTCTCCAAAATCAA+CGG 0.584889 3:-10429383 None:intergenic
GATTCCAAAGTTTCTTGTCA+GGG 0.584914 3:+10431478 MsG0380012068.01.T01:CDS
CCTCAGAACTGACACATGAA+AGG 0.589088 3:+10432278 MsG0380012068.01.T01:CDS
CACTGGATTATCTAGTCAGA+AGG 0.590926 3:+10432799 MsG0380012068.01.T01:CDS
GAGAACTAATGGCACGCTTG+GGG 0.591095 3:-10431652 None:intergenic
ATTTGCATGCTCGGATGCAG+AGG 0.591313 3:-10432167 None:intergenic
TTTAGAAGCCGCTGGTTAGG+GGG 0.597219 3:+10430882 MsG0380012068.01.T01:CDS
CTCCATGCTGCACAACATGA+AGG 0.597527 3:-10435668 None:intergenic
AGACTTCGATGTATTATCAA+GGG 0.599963 3:+10428551 MsG0380012068.01.T01:CDS
GGTGATGAAAATTATAATGG+AGG 0.601614 3:+10429883 MsG0380012068.01.T01:CDS
TTTCATATGAGGTGCAGAAG+TGG 0.603236 3:-10432708 None:intergenic
TTGAGGTGGACAATTGTCAA+AGG 0.604000 3:+10431882 MsG0380012068.01.T01:CDS
TTTGCATGCTCGGATGCAGA+GGG 0.604173 3:-10432166 None:intergenic
TGAGGTGGTTGAACAAATGT+CGG 0.604579 3:+10431991 MsG0380012068.01.T01:CDS
GTTAGTCTCTGACTTTGAGG+TGG 0.607087 3:+10431868 MsG0380012068.01.T01:CDS
TGTTCTGAAGCAAAGCTGCA+TGG 0.607193 3:-10431791 None:intergenic
ATTTAGAAGCCGCTGGTTAG+GGG 0.609153 3:+10430881 MsG0380012068.01.T01:CDS
TCTTTGACAAATTATTGCAG+AGG 0.610249 3:+10432734 MsG0380012068.01.T01:CDS
CCCTCTCCACCAAATTCAAG+GGG 0.610334 3:+10432878 MsG0380012068.01.T01:CDS
ACTTATAAGGAATTCTGGTG+GGG 0.612622 3:+10432838 MsG0380012068.01.T01:CDS
TATTCTACTTACTTCAACTG+AGG 0.614011 3:+10431973 MsG0380012068.01.T01:CDS
ACCTCAAAGTCAGAGACTAA+CGG 0.615352 3:-10431866 None:intergenic
AAATGTCGGAGAAGTTAACC+AGG 0.621196 3:+10432005 MsG0380012068.01.T01:CDS
TTCACACAACAAACCCGATG+AGG 0.622493 3:+10431697 MsG0380012068.01.T01:CDS
ACATGATCCCAAGTGTGCCA+GGG 0.623398 3:+10431562 MsG0380012068.01.T01:CDS
TGAAGCAGGCACGTCTTGAG+GGG 0.625500 3:+10429689 MsG0380012068.01.T01:CDS
ACATTCTCTATGTGGTGAGA+GGG 0.626169 3:+10430029 MsG0380012068.01.T01:CDS
TCCAAAGTTTCTTGTCAGGG+AGG 0.627267 3:+10431481 MsG0380012068.01.T01:CDS
GAAGTGGACCAGATTTGGGA+AGG 0.638959 3:+10434241 MsG0380012068.01.T01:CDS
TCACCTCCACATTCTCTATG+TGG 0.639331 3:+10430021 MsG0380012068.01.T01:CDS
CACCTATTAATCTAAACCAT+AGG 0.641241 3:+10432305 MsG0380012068.01.T01:CDS
GACTAGATAATCCAGTGAGG+AGG 0.642355 3:-10432793 None:intergenic
GCACTTATAAGGAATTCTGG+TGG 0.645175 3:+10432836 MsG0380012068.01.T01:CDS
CTTCATGTTGTGCAGCATGG+AGG 0.650134 3:+10435669 MsG0380012068.01.T01:CDS
TCACACAACAAACCCGATGA+GGG 0.651543 3:+10431698 MsG0380012068.01.T01:CDS
GCAGATATAGGCTTACCTGT+TGG 0.655352 3:+10429802 MsG0380012068.01.T01:CDS
AAGACAAGTATGCTCAACCC+TGG 0.662462 3:-10432023 None:intergenic
GTATTATCAAGGGAAGAAGG+TGG 0.671855 3:+10428561 MsG0380012068.01.T01:CDS
CAGAACTGACACATGAAAGG+AGG 0.673846 3:+10432281 MsG0380012068.01.T01:CDS
CATGGAACAACTGAACAAAG+AGG 0.675716 3:-10431773 None:intergenic
ACATTTCTCAGATAAAGTGG+AGG 0.694215 3:+10432507 MsG0380012068.01.T01:CDS
TCACCACATAGAGAATGTGG+AGG 0.727760 3:-10430024 None:intergenic
GAAGAGTTAACACTGTGTTG+TGG 0.739387 3:-10430700 None:intergenic
AATGTCGGAGAAGTTAACCA+GGG 0.752057 3:+10432006 MsG0380012068.01.T01:CDS
CTCAAAGTCAGAGACTAACG+GGG 0.756917 3:-10431864 None:intergenic
TCTGACTAGATAATCCAGTG+AGG 0.758137 3:-10432796 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAATTTATCTTTAATAAT+TGG + Chr3:10428806-10428825 MsG0380012068.01.T01:intron 10.0%
!!! ATATTAAATAGTATTGTTTT+AGG - Chr3:10433308-10433327 None:intergenic 10.0%
!!! ATTTTCTATAATTTAGTTTT+AGG + Chr3:10429062-10429081 MsG0380012068.01.T01:intron 10.0%
!!! TATTAAATAGTATTGTTTTA+GGG - Chr3:10433307-10433326 None:intergenic 10.0%
!!! TTTTTTTTTCTTCTTTTTTT+TGG + Chr3:10433801-10433820 MsG0380012068.01.T01:intron 10.0%
!! AAAAACAGTTTAATTGTATT+TGG - Chr3:10431001-10431020 None:intergenic 15.0%
!! AAACCAAATTGAAAAAAAAT+TGG + Chr3:10430488-10430507 MsG0380012068.01.T01:intron 15.0%
!! AACAAATTATTTGATTAATG+TGG + Chr3:10434627-10434646 MsG0380012068.01.T01:intron 15.0%
!! ACTAATAATTAGTAGTAATA+TGG + Chr3:10435369-10435388 MsG0380012068.01.T01:intron 15.0%
!! TATTATTCTATGTAACAAAA+AGG + Chr3:10432937-10432956 MsG0380012068.01.T01:CDS 15.0%
!!! AATTGACTTAATTAAGTATT+TGG - Chr3:10435059-10435078 None:intergenic 15.0%
!!! ATTAAATAGTATTGTTTTAG+GGG - Chr3:10433306-10433325 None:intergenic 15.0%
!!! TCTTATTCTTTTATACATTT+GGG + Chr3:10430292-10430311 MsG0380012068.01.T01:intron 15.0%
!!! TTAATTAATAATTGACTTCT+TGG + Chr3:10433706-10433725 MsG0380012068.01.T01:intron 15.0%
!!! TTTTTGTTACATAGAATAAT+AGG - Chr3:10432938-10432957 None:intergenic 15.0%
!! AAAATAAAACTTACATTTCC+AGG - Chr3:10428651-10428670 None:intergenic 20.0%
!! AAAGATAAATAGTCTGAAAA+GGG - Chr3:10431291-10431310 None:intergenic 20.0%
!! AAGGAAAAAAAAATGGAAAA+GGG - Chr3:10435652-10435671 None:intergenic 20.0%
!! ACAGAACAATAATCTTATTA+TGG + Chr3:10432429-10432448 MsG0380012068.01.T01:CDS 20.0%
!! ATGCATAACTATTAAGAAAA+AGG - Chr3:10432993-10433012 None:intergenic 20.0%
!! CATACATGACTTAATAAAAA+TGG + Chr3:10429612-10429631 MsG0380012068.01.T01:CDS 20.0%
!! GAAGATAAACATATTTGAAA+AGG - Chr3:10428867-10428886 None:intergenic 20.0%
!! GAGAAAATTTATCTAAGTAA+AGG + Chr3:10433265-10433284 MsG0380012068.01.T01:intron 20.0%
!! GTTTCAGTAAATAATACTAT+GGG - Chr3:10428889-10428908 None:intergenic 20.0%
!! TAAAAACTACTTACCATAAT+AGG - Chr3:10435831-10435850 None:intergenic 20.0%
!! TACTTGTATTTCTTTAACAT+AGG + Chr3:10430454-10430473 MsG0380012068.01.T01:intron 20.0%
!! TGTTTAGTGAATCTTATAAA+TGG - Chr3:10428770-10428789 None:intergenic 20.0%
!! TGTTTCAGTAAATAATACTA+TGG - Chr3:10428890-10428909 None:intergenic 20.0%
!! TTAAAAAGATATGTTTCCTT+TGG + Chr3:10435098-10435117 MsG0380012068.01.T01:intron 20.0%
!! TTTAGGTAAAGATATATGAA+TGG + Chr3:10430425-10430444 MsG0380012068.01.T01:intron 20.0%
!!! ATATCATTTACAGAAGTTTT+AGG - Chr3:10432352-10432371 None:intergenic 20.0%
!!! CATCAAATATTTTGAAATTG+AGG - Chr3:10433139-10433158 None:intergenic 20.0%
!!! CATTTTTAACTCCAATATAA+TGG + Chr3:10433882-10433901 MsG0380012068.01.T01:intron 20.0%
!!! GAATTTTTTTTCGTTGTTTT+AGG - Chr3:10429463-10429482 None:intergenic 20.0%
!!! GTCTTATTCTTTTATACATT+TGG + Chr3:10430291-10430310 MsG0380012068.01.T01:intron 20.0%
!!! GTTTTCGATTAGTTTAATTT+AGG + Chr3:10434502-10434521 MsG0380012068.01.T01:intron 20.0%
!!! TACATAAGCTTTAATAACTA+GGG - Chr3:10430792-10430811 None:intergenic 20.0%
!!! TATTGATTTTCATCTGTTAA+TGG + Chr3:10431029-10431048 MsG0380012068.01.T01:intron 20.0%
!!! TTAAATAGTATTGTTTTAGG+GGG - Chr3:10433305-10433324 None:intergenic 20.0%
!!! TTACATAAGCTTTAATAACT+AGG - Chr3:10430793-10430812 None:intergenic 20.0%
!!! TTTTTTTTGGAATTACTAAC+AGG + Chr3:10433814-10433833 MsG0380012068.01.T01:intron 20.0%
! AAAGAAAATGACAATTGGTA+TGG - Chr3:10430964-10430983 None:intergenic 25.0%
! AAAGACAAATCCAGTAATAT+TGG - Chr3:10430593-10430612 None:intergenic 25.0%
! AACAAATAAGCAATTGACAA+AGG - Chr3:10431077-10431096 None:intergenic 25.0%
! AACATAATAAACACACATGA+AGG - Chr3:10434417-10434436 None:intergenic 25.0%
! ACAAGTAATTTACATGATTC+TGG - Chr3:10429176-10429195 None:intergenic 25.0%
! ACATAATAAACACACATGAA+GGG - Chr3:10434416-10434435 None:intergenic 25.0%
! AGATCATTCACAAAATGTTT+AGG - Chr3:10430093-10430112 None:intergenic 25.0%
! ATTCACTAAACAATATCACT+CGG + Chr3:10428778-10428797 MsG0380012068.01.T01:intron 25.0%
! ATTGGAACTCAAAATGAATT+AGG + Chr3:10435414-10435433 MsG0380012068.01.T01:intron 25.0%
! ATTTGTCAAAATTTCAGAAG+TGG + Chr3:10434951-10434970 MsG0380012068.01.T01:intron 25.0%
! CAAAGATAAATAGTCTGAAA+AGG - Chr3:10431292-10431311 None:intergenic 25.0%
! CAACATGAAGGAAAAAAAAA+TGG - Chr3:10435659-10435678 None:intergenic 25.0%
! CAAGTAATTTACATGATTCT+GGG - Chr3:10429175-10429194 None:intergenic 25.0%
! CATAAGGAAATCGTTTAAAT+CGG - Chr3:10429770-10429789 None:intergenic 25.0%
! CTATTAAGAAAAAGGACAAA+AGG - Chr3:10432985-10433004 None:intergenic 25.0%
! GAAGGAAAAAAAAATGGAAA+AGG - Chr3:10435653-10435672 None:intergenic 25.0%
! GTTAAGTAAAGATATACGAA+TGG + Chr3:10430269-10430288 MsG0380012068.01.T01:intron 25.0%
! TAAGAGAAGTAAAAGATGAA+GGG - Chr3:10430940-10430959 None:intergenic 25.0%
! TACCAAAAGAAAATGACAAT+TGG - Chr3:10430969-10430988 None:intergenic 25.0%
! TATAATCAGTTACTACTTAC+TGG - Chr3:10435567-10435586 None:intergenic 25.0%
! TATCTATTCACTAATATGAG+AGG - Chr3:10433345-10433364 None:intergenic 25.0%
! TCAAATGTATTTCATGCAAA+AGG + Chr3:10429853-10429872 MsG0380012068.01.T01:CDS 25.0%
! TGAACCTGAAAAATGAAAAA+CGG + Chr3:10431456-10431475 MsG0380012068.01.T01:CDS 25.0%
! TGCATGAAATACATTTGAAT+TGG - Chr3:10429851-10429870 None:intergenic 25.0%
! TTCAGATTTATCATCAAACT+TGG - Chr3:10429950-10429969 None:intergenic 25.0%
! TTCCATAGATTAAAGAAACA+AGG - Chr3:10434098-10434117 None:intergenic 25.0%
! TTTGTCAAAATTTCAGAAGT+GGG + Chr3:10434952-10434971 MsG0380012068.01.T01:intron 25.0%
!! AAAGAAGTTTGAAATCAACT+TGG + Chr3:10429972-10429991 MsG0380012068.01.T01:CDS 25.0%
!! ATGAGATTGATTCAAATCTT+GGG - Chr3:10429314-10429333 None:intergenic 25.0%
!! ATTAATAATTGACTTCTTGG+TGG + Chr3:10433709-10433728 MsG0380012068.01.T01:intron 25.0%
!! ATTTTTCACTGCAATAATGT+AGG + Chr3:10432650-10432669 MsG0380012068.01.T01:intron 25.0%
!! CTCTTTCAAAAATATGCTTT+TGG - Chr3:10434283-10434302 None:intergenic 25.0%
!! TACCTTGTTTCTTTAATCTA+TGG + Chr3:10434093-10434112 MsG0380012068.01.T01:intron 25.0%
!! TCTGGTGATGAAAATTATAA+TGG + Chr3:10429880-10429899 MsG0380012068.01.T01:CDS 25.0%
!! TTGACATCAATACCATATTT+TGG - Chr3:10428531-10428550 None:intergenic 25.0%
!! TTGATGTATCTTTCAGTTTT+AGG + Chr3:10432603-10432622 MsG0380012068.01.T01:intron 25.0%
!! TTTTAATGTCAGACAAATGA+GGG - Chr3:10435508-10435527 None:intergenic 25.0%
!!! AAGCATATTTTTGAAAGAGT+TGG + Chr3:10434284-10434303 MsG0380012068.01.T01:CDS 25.0%
!!! AATTTTAGAAATTTCCCTCA+TGG - Chr3:10435146-10435165 None:intergenic 25.0%
!!! ATAATTGATGCCTTTAGAAT+TGG + Chr3:10435194-10435213 MsG0380012068.01.T01:intron 25.0%
!!! ATTTTGAGTTCCAATGAAAT+TGG - Chr3:10435409-10435428 None:intergenic 25.0%
!!! TACCAATTGTCATTTTCTTT+TGG + Chr3:10430964-10430983 MsG0380012068.01.T01:intron 25.0%
!!! TAGCATTCTCGTTTTTTTTT+TGG + Chr3:10430525-10430544 MsG0380012068.01.T01:intron 25.0%
!!! TCGCCAATTTTTTTTCAATT+TGG - Chr3:10430494-10430513 None:intergenic 25.0%
AAAACCAAGACTTTATTGCA+AGG + Chr3:10433768-10433787 MsG0380012068.01.T01:intron 30.0%
AAACCAGAATCATGAAACAA+TGG - Chr3:10434182-10434201 None:intergenic 30.0%
AAACTATCCTCCAATTTCAT+TGG + Chr3:10435396-10435415 MsG0380012068.01.T01:intron 30.0%
AAAGATATGTTTCCTTTGGT+CGG + Chr3:10435102-10435121 MsG0380012068.01.T01:intron 30.0%
AACAACAGACACCATTATAT+TGG - Chr3:10433896-10433915 None:intergenic 30.0%
AACTCAAAATGAATTAGGAC+AGG + Chr3:10435419-10435438 MsG0380012068.01.T01:intron 30.0%
AAGACTTCGATGTATTATCA+AGG + Chr3:10428550-10428569 MsG0380012068.01.T01:CDS 30.0%
AAGGTAACTTACTTTGTTGA+GGG - Chr3:10430160-10430179 None:intergenic 30.0%
AATACAGATGTTTCTTAGAC+AGG - Chr3:10430207-10430226 None:intergenic 30.0%
AATCAAGTGACTCAAATGTA+GGG - Chr3:10431241-10431260 None:intergenic 30.0%
AATCATGAAACAATGGAAAG+GGG - Chr3:10434175-10434194 None:intergenic 30.0%
AGAATCATGAAACAATGGAA+AGG - Chr3:10434177-10434196 None:intergenic 30.0%
AGACTTCGATGTATTATCAA+GGG + Chr3:10428551-10428570 MsG0380012068.01.T01:CDS 30.0%
AGAGAATGAGCAAATAAGAT+GGG - Chr3:10434782-10434801 None:intergenic 30.0%
AGCTATTGTAGTTGAAGAAA+AGG + Chr3:10435758-10435777 MsG0380012068.01.T01:CDS 30.0%
AGGAAGTAAAAGAGGAAAAA+TGG - Chr3:10431202-10431221 None:intergenic 30.0%
AGTGGGAAAAATCTCATATA+AGG + Chr3:10434969-10434988 MsG0380012068.01.T01:intron 30.0%
ATACTACTATTGTGTAGTGT+AGG + Chr3:10430392-10430411 MsG0380012068.01.T01:intron 30.0%
ATAGTAGTATTCGATAACTG+TGG - Chr3:10430382-10430401 None:intergenic 30.0%
ATCTGTAAGTTCTACTATCA+TGG + Chr3:10431318-10431337 MsG0380012068.01.T01:intron 30.0%
ATGAAGGAATTCATATTTCG+AGG + Chr3:10432761-10432780 MsG0380012068.01.T01:CDS 30.0%
ATGATAGTAGAACTTACAGA+TGG - Chr3:10431319-10431338 None:intergenic 30.0%
ATTATCTAGTCAGAAGGAAA+GGG + Chr3:10432805-10432824 MsG0380012068.01.T01:CDS 30.0%
ATTTAGTTAAAGCTGCTTCA+TGG + Chr3:10435163-10435182 MsG0380012068.01.T01:intron 30.0%
CAAAGCATAAATAAGCAACT+TGG - Chr3:10435311-10435330 None:intergenic 30.0%
CAAATTTGCATGTATCATCA+AGG + Chr3:10434340-10434359 MsG0380012068.01.T01:CDS 30.0%
CAAGTTGCTTATTTATGCTT+TGG + Chr3:10435309-10435328 MsG0380012068.01.T01:intron 30.0%
CAATTCACAAGAATAGACTT+TGG - Chr3:10429128-10429147 None:intergenic 30.0%
CACCTATTAATCTAAACCAT+AGG + Chr3:10432305-10432324 MsG0380012068.01.T01:CDS 30.0%
CATAAATAAGCAACTTGGAT+TGG - Chr3:10435306-10435325 None:intergenic 30.0%
CATATTCTCTCCAAAATCAA+CGG - Chr3:10429386-10429405 None:intergenic 30.0%
CGATAGATGTACGTTTATAT+TGG + Chr3:10431124-10431143 MsG0380012068.01.T01:intron 30.0%
CGATTTAAACGATTTCCTTA+TGG + Chr3:10429768-10429787 MsG0380012068.01.T01:CDS 30.0%
CTAAGAGAAGTAAAAGATGA+AGG - Chr3:10430941-10430960 None:intergenic 30.0%
CTAAGTTTCAAATTCCATGA+GGG + Chr3:10435129-10435148 MsG0380012068.01.T01:intron 30.0%
GAAAAGGAAATTGTCAAAGT+TGG + Chr3:10432540-10432559 MsG0380012068.01.T01:CDS 30.0%
GAAATCGTTTAAATCGGAAA+GGG - Chr3:10429764-10429783 None:intergenic 30.0%
GAACTTAATTCCTGTATGTA+CGG - Chr3:10435263-10435282 None:intergenic 30.0%
GAATCATGAAACAATGGAAA+GGG - Chr3:10434176-10434195 None:intergenic 30.0%
GGAAGTAAAAGAGGAAAAAT+GGG - Chr3:10431201-10431220 None:intergenic 30.0%
GGTGATGAAAATTATAATGG+AGG + Chr3:10429883-10429902 MsG0380012068.01.T01:CDS 30.0%
GTCAAAGAATGTTTCATATG+AGG - Chr3:10432722-10432741 None:intergenic 30.0%
GTCCTATGGTTTAGATTAAT+AGG - Chr3:10432310-10432329 None:intergenic 30.0%
GTGGGAAAAATCTCATATAA+GGG + Chr3:10434970-10434989 MsG0380012068.01.T01:intron 30.0%
GTTCATACATTGACATTAGA+AGG - Chr3:10428748-10428767 None:intergenic 30.0%
GTTCATCTATTAGAGCAAAA+AGG + Chr3:10432672-10432691 MsG0380012068.01.T01:CDS 30.0%
TAACTAGGATGTATGATAGA+AGG - Chr3:10434894-10434913 None:intergenic 30.0%
TAATCAAGTGACTCAAATGT+AGG - Chr3:10431242-10431261 None:intergenic 30.0%
TACATAGATGCTTTACACAT+GGG + Chr3:10433217-10433236 MsG0380012068.01.T01:intron 30.0%
TAGTAGTATTCGATAACTGT+GGG - Chr3:10430381-10430400 None:intergenic 30.0%
TATTCTACTTACTTCAACTG+AGG + Chr3:10431973-10431992 MsG0380012068.01.T01:CDS 30.0%
TCATATGGTTCCAATTCTAA+AGG - Chr3:10435207-10435226 None:intergenic 30.0%
TCTCACATGAGAATTTCATA+TGG - Chr3:10435222-10435241 None:intergenic 30.0%
TCTTTGACAAATTATTGCAG+AGG + Chr3:10432734-10432753 MsG0380012068.01.T01:CDS 30.0%
TGAAGATATGTTTGAAGACA+TGG - Chr3:10434148-10434167 None:intergenic 30.0%
TGCAACAATGTATGTACTTT+GGG - Chr3:10433647-10433666 None:intergenic 30.0%
TGGGAAAAATCTCATATAAG+GGG + Chr3:10434971-10434990 MsG0380012068.01.T01:intron 30.0%
TGTAATGACAAAGCTTTACT+TGG - Chr3:10429349-10429368 None:intergenic 30.0%
TGTATTGCATTCTCAAGATA+TGG + Chr3:10431721-10431740 MsG0380012068.01.T01:CDS 30.0%
TTATACACTAAGGTGTGTTT+GGG - Chr3:10435533-10435552 None:intergenic 30.0%
TTGATGAATCACAAAGTAGT+TGG + Chr3:10433153-10433172 MsG0380012068.01.T01:intron 30.0%
TTGCAACAATGTATGTACTT+TGG - Chr3:10433648-10433667 None:intergenic 30.0%
TTGGACTTCAAAGAAATACT+AGG + Chr3:10433172-10433191 MsG0380012068.01.T01:intron 30.0%
TTTAAACGATTTCCTTATGG+AGG + Chr3:10429771-10429790 MsG0380012068.01.T01:CDS 30.0%
TTTACCAGGAAGAATGTTAT+TGG + Chr3:10435894-10435913 MsG0380012068.01.T01:intron 30.0%
TTTCCATTGTTTCATGATTC+TGG + Chr3:10434176-10434195 MsG0380012068.01.T01:intron 30.0%
! AAACTCTTCAATGGTTAGTT+CGG + Chr3:10435706-10435725 MsG0380012068.01.T01:CDS 30.0%
! AGTTGCCATTTATTCTTATC+TGG + Chr3:10428591-10428610 MsG0380012068.01.T01:CDS 30.0%
! ATTGATTCAAATCTTGGGTT+GGG - Chr3:10429309-10429328 None:intergenic 30.0%
! ATTGGAAAGATTTTCTCCAA+AGG - Chr3:10429833-10429852 None:intergenic 30.0%
! CTTGATGATACATGCAAATT+TGG - Chr3:10434342-10434361 None:intergenic 30.0%
! GATGAGATTGATTCAAATCT+TGG - Chr3:10429315-10429334 None:intergenic 30.0%
! GATGTTGACAATTCAACTTT+TGG + Chr3:10430335-10430354 MsG0380012068.01.T01:intron 30.0%
! TAAGTTATAAGCATCGTTCT+CGG - Chr3:10433580-10433599 None:intergenic 30.0%
! TCTTTTCATAAACGATAACC+TGG + Chr3:10433611-10433630 MsG0380012068.01.T01:intron 30.0%
! TGTACGTTTATATTGGTTAG+TGG + Chr3:10431131-10431150 MsG0380012068.01.T01:intron 30.0%
! TTCTTTAACATAGGCTTTTC+AGG + Chr3:10430463-10430482 MsG0380012068.01.T01:intron 30.0%
! TTTACTAAATCCCACGATTT+TGG - Chr3:10434998-10435017 None:intergenic 30.0%
!! ACCAACTATCTTTAAAGCTT+AGG + Chr3:10430244-10430263 MsG0380012068.01.T01:intron 30.0%
!! ATTGATACAGTTTTATGACC+AGG + Chr3:10429198-10429217 MsG0380012068.01.T01:intron 30.0%
!! CTTATTTATGCTTTGGTGTT+TGG + Chr3:10435316-10435335 MsG0380012068.01.T01:intron 30.0%
!! GAATCCGTTTTTCATTTTTC+AGG - Chr3:10431463-10431482 None:intergenic 30.0%
!! GCTTAGCAATTTGTTGTATA+TGG + Chr3:10428952-10428971 MsG0380012068.01.T01:intron 30.0%
!! GTTTTAATGTCAGACAAATG+AGG - Chr3:10435509-10435528 None:intergenic 30.0%
!! TCAATACCATATTTTGGAGA+AGG - Chr3:10428525-10428544 None:intergenic 30.0%
!! TTGATACAGTTTTATGACCA+GGG + Chr3:10429199-10429218 MsG0380012068.01.T01:intron 30.0%
!! TTTAATTTTTGTCTCCCTCT+TGG + Chr3:10431381-10431400 MsG0380012068.01.T01:intron 30.0%
!! TTTGTTTTCATTTGCATGCT+CGG - Chr3:10432179-10432198 None:intergenic 30.0%
!! TTTTGGTTAACATCTTGGTT+TGG - Chr3:10432070-10432089 None:intergenic 30.0%
!!! AGTGCTCAATTTTTTTTACC+AGG + Chr3:10435880-10435899 MsG0380012068.01.T01:intron 30.0%
!!! GTGTAGGTTTTGATTCTTTT+AGG + Chr3:10430408-10430427 MsG0380012068.01.T01:intron 30.0%
!!! TAGAGTTTTGGTTAACATCT+TGG - Chr3:10432075-10432094 None:intergenic 30.0%
!!! TCATTTTTCAGGTTCAATGA+AGG - Chr3:10431452-10431471 None:intergenic 30.0%
!!! TTTTTTGAATCGAGCAATGA+AGG - Chr3:10431422-10431441 None:intergenic 30.0%
AAAAAATGGAAAAGGGAGAG+AGG - Chr3:10435645-10435664 None:intergenic 35.0%
AAACTTACATTTCCAGGAGA+TGG - Chr3:10428645-10428664 None:intergenic 35.0%
AAATTCTCATGTGAGACCAT+TGG + Chr3:10435226-10435245 MsG0380012068.01.T01:intron 35.0%
AAGATGTGAAAAACGAGAAC+TGG + Chr3:10430835-10430854 MsG0380012068.01.T01:CDS 35.0%
AAGGTTCACGTTATACACTA+AGG - Chr3:10435543-10435562 None:intergenic 35.0%
AATCCTCAGTAGCATAAAGT+GGG - Chr3:10433067-10433086 None:intergenic 35.0%
ACAACCATACAAGAATTTGG+CGG - Chr3:10433934-10433953 None:intergenic 35.0%
ACTGCGTAAATCATACTTGT+AGG - Chr3:10433115-10433134 None:intergenic 35.0%
ACTTATAAGGAATTCTGGTG+GGG + Chr3:10432838-10432857 MsG0380012068.01.T01:CDS 35.0%
AGATAACTGCTGAAAAAGAG+AGG - Chr3:10434384-10434403 None:intergenic 35.0%
AGATGTGAAAAACGAGAACT+GGG + Chr3:10430836-10430855 MsG0380012068.01.T01:CDS 35.0%
AGCACAACCATACAAGAATT+TGG - Chr3:10433937-10433956 None:intergenic 35.0%
AGTAGTATTCGATAACTGTG+GGG - Chr3:10430380-10430399 None:intergenic 35.0%
ATCATGAAACAATGGAAAGG+GGG - Chr3:10434174-10434193 None:intergenic 35.0%
ATCGTGGGATTTAGTAAAAG+AGG + Chr3:10435000-10435019 MsG0380012068.01.T01:intron 35.0%
ATCTTGCATTCTAACCCTTA+CGG - Chr3:10434730-10434749 None:intergenic 35.0%
CAAATCGAAATGACATGAAG+TGG + Chr3:10434225-10434244 MsG0380012068.01.T01:CDS 35.0%
CAAGATATTTCCGTACATAC+AGG + Chr3:10435250-10435269 MsG0380012068.01.T01:intron 35.0%
CACTTATAAGGAATTCTGGT+GGG + Chr3:10432837-10432856 MsG0380012068.01.T01:CDS 35.0%
CACTTTCCAGAAAGATGATT+TGG + Chr3:10430651-10430670 MsG0380012068.01.T01:intron 35.0%
CAGCGAAATATAAAGAGATC+AGG - Chr3:10429230-10429249 None:intergenic 35.0%
CATACTTAGCTGAGAACTAA+TGG - Chr3:10431666-10431685 None:intergenic 35.0%
CATCAAAGTCCTTTCTTCAT+CGG - Chr3:10435736-10435755 None:intergenic 35.0%
CATTCTGATGATCCTGATTT+GGG + Chr3:10430057-10430076 MsG0380012068.01.T01:CDS 35.0%
CCTAAGTTTCAAATTCCATG+AGG + Chr3:10435128-10435147 MsG0380012068.01.T01:intron 35.0%
CCTTTGACAATGTGACTATT+GGG - Chr3:10433514-10433533 None:intergenic 35.0%
CGCTTCCAGATAAGAATAAA+TGG - Chr3:10428599-10428618 None:intergenic 35.0%
CTATTAGAGCAAAAAGGCAA+CGG + Chr3:10432678-10432697 MsG0380012068.01.T01:CDS 35.0%
CTGCGTAAATCATACTTGTA+GGG - Chr3:10433114-10433133 None:intergenic 35.0%
CTGTATGTACGGAAATATCT+TGG - Chr3:10435252-10435271 None:intergenic 35.0%
CTGTTATATCAATTCACGAG+CGG - Chr3:10434584-10434603 None:intergenic 35.0%
CTTCAATACTAAGAGTTGAC+TGG + Chr3:10433964-10433983 MsG0380012068.01.T01:CDS 35.0%
GAAGGTAACTTACTTTGTTG+AGG - Chr3:10430161-10430180 None:intergenic 35.0%
GAATCTAATTCCTTCCAAGA+GGG - Chr3:10431398-10431417 None:intergenic 35.0%
GACGTATCACATATTAACTG+AGG - Chr3:10433420-10433439 None:intergenic 35.0%
GACTTTAACATGTCCATCAA+CGG - Chr3:10432476-10432495 None:intergenic 35.0%
GAGAAGGCAATAACATAACT+GGG - Chr3:10430770-10430789 None:intergenic 35.0%
GAGAGAATGAGCAAATAAGA+TGG - Chr3:10434783-10434802 None:intergenic 35.0%
GATGAAGAAAGGACTTTGAT+GGG + Chr3:10435735-10435754 MsG0380012068.01.T01:CDS 35.0%
GATGTATTATCAAGGGAAGA+AGG + Chr3:10428558-10428577 MsG0380012068.01.T01:CDS 35.0%
GATTATCTAGTCAGAAGGAA+AGG + Chr3:10432804-10432823 MsG0380012068.01.T01:CDS 35.0%
GATTCCAAAGTTTCTTGTCA+GGG + Chr3:10431478-10431497 MsG0380012068.01.T01:CDS 35.0%
GCTTTGCTCATATTCTTGTT+TGG + Chr3:10431357-10431376 MsG0380012068.01.T01:intron 35.0%
GGAAATCGTTTAAATCGGAA+AGG - Chr3:10429765-10429784 None:intergenic 35.0%
GGAAGCAAAGAAAAGGTAAA+GGG - Chr3:10433046-10433065 None:intergenic 35.0%
GGACTGTATCAAAGACAAAA+TGG - Chr3:10433493-10433512 None:intergenic 35.0%
GGCCAGTTTAAAAAATGTCA+CGG + Chr3:10431050-10431069 MsG0380012068.01.T01:intron 35.0%
GTACATAGATGCTTTACACA+TGG + Chr3:10433216-10433235 MsG0380012068.01.T01:intron 35.0%
GTAGGAAGAATGAAGGAATT+AGG - Chr3:10434758-10434777 None:intergenic 35.0%
GTTATACACTAAGGTGTGTT+TGG - Chr3:10435534-10435553 None:intergenic 35.0%
TAAACGATAACCTGGTTGTT+AGG + Chr3:10433619-10433638 MsG0380012068.01.T01:intron 35.0%
TAAAGTGGGAAGCAAAGAAA+AGG - Chr3:10433053-10433072 None:intergenic 35.0%
TAACTCATCACTCTTGTCAT+CGG - Chr3:10432254-10432273 None:intergenic 35.0%
TCAGTTACTACTTACTGGTA+AGG - Chr3:10435562-10435581 None:intergenic 35.0%
TCATTGTCAATGCATAGGAT+AGG + Chr3:10434044-10434063 MsG0380012068.01.T01:intron 35.0%
TCCTTTGACAATGTGACTAT+TGG - Chr3:10433515-10433534 None:intergenic 35.0%
TCTTTATATTTCGCTGAAGC+AGG + Chr3:10429234-10429253 MsG0380012068.01.T01:intron 35.0%
TGAATCTAATTCCTTCCAAG+AGG - Chr3:10431399-10431418 None:intergenic 35.0%
TGACATTAGAAGGTTACACT+TGG - Chr3:10428738-10428757 None:intergenic 35.0%
TGCTTATGTGACACATAACT+AGG - Chr3:10434909-10434928 None:intergenic 35.0%
TGTTCTCATTGTCAATGCAT+AGG + Chr3:10434039-10434058 MsG0380012068.01.T01:intron 35.0%
TTGAATTGTCAACATCACAC+AGG - Chr3:10430331-10430350 None:intergenic 35.0%
TTGAGTTCCAATGAAATTGG+AGG - Chr3:10435406-10435425 None:intergenic 35.0%
TTGCATTCTCAAGATATGGT+TGG + Chr3:10431725-10431744 MsG0380012068.01.T01:CDS 35.0%
TTTGTTGAGGGCTAAATCAT+TGG - Chr3:10430148-10430167 None:intergenic 35.0%
! ACATGGGCTTATGCTATTTA+AGG + Chr3:10433233-10433252 MsG0380012068.01.T01:intron 35.0%
! AGCTTTAATAACTAGGGAGA+AGG - Chr3:10430786-10430805 None:intergenic 35.0%
! ATGGACTGATCACTTGTAAT+GGG + Chr3:10428971-10428990 MsG0380012068.01.T01:intron 35.0%
! CAAATCATCTTTCTGGAAAG+TGG - Chr3:10430653-10430672 None:intergenic 35.0%
! CACTTCATGTCATTTCGATT+TGG - Chr3:10434227-10434246 None:intergenic 35.0%
! CCTCATGGAATTTGAAACTT+AGG - Chr3:10435131-10435150 None:intergenic 35.0%
! CGAAAACGATACAGAGTATT+TGG + Chr3:10431841-10431860 MsG0380012068.01.T01:CDS 35.0%
! CTTCTTTTTCCCCTTGAATT+TGG - Chr3:10432890-10432909 None:intergenic 35.0%
! GAAGCACTTATAAGGAATTC+TGG + Chr3:10432833-10432852 MsG0380012068.01.T01:CDS 35.0%
! GAAGTTTGAAATCAACTTGG+AGG + Chr3:10429975-10429994 MsG0380012068.01.T01:CDS 35.0%
! GATTGATTCAAATCTTGGGT+TGG - Chr3:10429310-10429329 None:intergenic 35.0%
! TATGGACTGATCACTTGTAA+TGG + Chr3:10428970-10428989 MsG0380012068.01.T01:intron 35.0%
! TCACTTTGGTTAGTTGAAAG+TGG - Chr3:10432106-10432125 None:intergenic 35.0%
! TCTTGAAGAAGCATATGTGT+TGG + Chr3:10433452-10433471 MsG0380012068.01.T01:intron 35.0%
!! ATTTATGCTTTGGTGTTTGG+AGG + Chr3:10435319-10435338 MsG0380012068.01.T01:intron 35.0%
!! CAGTTTCTGGTACTACATAT+TGG - Chr3:10432396-10432415 None:intergenic 35.0%
!! GCCTAAGCTTTAAAGATAGT+TGG - Chr3:10430248-10430267 None:intergenic 35.0%
!! TGATACAGTTTTATGACCAG+GGG + Chr3:10429200-10429219 MsG0380012068.01.T01:intron 35.0%
!! TTCTAAATCTTTCTGGAGCT+AGG - Chr3:10430869-10430888 None:intergenic 35.0%
!! TTTATGCTTTGGTGTTTGGA+GGG + Chr3:10435320-10435339 MsG0380012068.01.T01:intron 35.0%
!!! GACCGTGACATTTTTTAAAC+TGG - Chr3:10431055-10431074 None:intergenic 35.0%
AAATCAACGGAAGTTTGAGC+AGG - Chr3:10429373-10429392 None:intergenic 40.0%
AAATGTCGGAGAAGTTAACC+AGG + Chr3:10432005-10432024 MsG0380012068.01.T01:CDS 40.0%
AATGTCGGAGAAGTTAACCA+GGG + Chr3:10432006-10432025 MsG0380012068.01.T01:CDS 40.0%
ACAGATGTTTCTTAGACAGG+CGG - Chr3:10430204-10430223 None:intergenic 40.0%
ACATGAAGTGGACCAGATTT+GGG + Chr3:10434237-10434256 MsG0380012068.01.T01:CDS 40.0%
ACATTCTCTATGTGGTGAGA+GGG + Chr3:10430029-10430048 MsG0380012068.01.T01:CDS 40.0%
ACCTCAAAGTCAGAGACTAA+CGG - Chr3:10431869-10431888 None:intergenic 40.0%
ACGACCAATAACATTCTTCC+TGG - Chr3:10435901-10435920 None:intergenic 40.0%
AGAATGCAATACACCCTCAT+CGG - Chr3:10431714-10431733 None:intergenic 40.0%
AGAGTTGGCATTATGCTTCA+CGG + Chr3:10434299-10434318 MsG0380012068.01.T01:CDS 40.0%
AGGTAAGCCTATATCTGCAT+AGG - Chr3:10429800-10429819 None:intergenic 40.0%
ATATAAGGGGACCAAAATCG+TGG + Chr3:10434984-10435003 MsG0380012068.01.T01:intron 40.0%
ATGCAGCAGCAATATCACTT+TGG - Chr3:10432120-10432139 None:intergenic 40.0%
CAAACCGCCAAATTCTTGTA+TGG + Chr3:10433927-10433946 MsG0380012068.01.T01:CDS 40.0%
CAATGTGCAGGAAGTAAAAG+AGG - Chr3:10431210-10431229 None:intergenic 40.0%
CACTAAACAATATCACTCGG+AGG + Chr3:10428781-10428800 MsG0380012068.01.T01:intron 40.0%
CACTGGATTATCTAGTCAGA+AGG + Chr3:10432799-10432818 MsG0380012068.01.T01:CDS 40.0%
CATGGAACAACTGAACAAAG+AGG - Chr3:10431776-10431795 None:intergenic 40.0%
CCATAGCCAAATCATCTTTC+TGG - Chr3:10430660-10430679 None:intergenic 40.0%
CCCAATAGTCACATTGTCAA+AGG + Chr3:10433511-10433530 MsG0380012068.01.T01:intron 40.0%
CGATGAAGAAAGGACTTTGA+TGG + Chr3:10435734-10435753 MsG0380012068.01.T01:CDS 40.0%
CTAACTGATTGTCTTGCATC+TGG + Chr3:10433987-10434006 MsG0380012068.01.T01:CDS 40.0%
GAAGAGTTAACACTGTGTTG+TGG - Chr3:10430703-10430722 None:intergenic 40.0%
GAATCCTCAGTAGCATAAAG+TGG - Chr3:10433068-10433087 None:intergenic 40.0%
GAATTAGGACAGGACTTTGA+GGG + Chr3:10435429-10435448 MsG0380012068.01.T01:intron 40.0%
GACACATACACAGTTATCAG+AGG - Chr3:10433020-10433039 None:intergenic 40.0%
GAGAACACAACTTACTTGTC+AGG - Chr3:10434026-10434045 None:intergenic 40.0%
GAGAATACCTTTCTCTGTTG+AGG - Chr3:10434696-10434715 None:intergenic 40.0%
GAGAATATGCATTCCATGTC+AGG + Chr3:10429397-10429416 MsG0380012068.01.T01:CDS 40.0%
GAGCATCTCACCAATATTAC+TGG + Chr3:10430580-10430599 MsG0380012068.01.T01:intron 40.0%
GAGTGCAATAAATCCGTTGA+TGG + Chr3:10432460-10432479 MsG0380012068.01.T01:CDS 40.0%
GATATTGCTGCTGCATCTTT+GGG + Chr3:10432124-10432143 MsG0380012068.01.T01:CDS 40.0%
GCACTTATAAGGAATTCTGG+TGG + Chr3:10432836-10432855 MsG0380012068.01.T01:CDS 40.0%
GCATTCTGATGATCCTGATT+TGG + Chr3:10430056-10430075 MsG0380012068.01.T01:CDS 40.0%
GGAGAAGGCAATAACATAAC+TGG - Chr3:10430771-10430790 None:intergenic 40.0%
GGAGCAGGATATTCCTATTA+TGG + Chr3:10435815-10435834 MsG0380012068.01.T01:CDS 40.0%
GGATTCCAAAGTTTCTTGTC+AGG + Chr3:10431477-10431496 MsG0380012068.01.T01:CDS 40.0%
GGGAAGCAAAGAAAAGGTAA+AGG - Chr3:10433047-10433066 None:intergenic 40.0%
GTAAAAGAGGAAAAATGGGC+AGG - Chr3:10431197-10431216 None:intergenic 40.0%
GTATTATCAAGGGAAGAAGG+TGG + Chr3:10428561-10428580 MsG0380012068.01.T01:CDS 40.0%
GTTTGGAGAGTTTGAGAGAA+AGG - Chr3:10434807-10434826 None:intergenic 40.0%
TACGGAAATATCTTGGCCAA+TGG - Chr3:10435245-10435264 None:intergenic 40.0%
TATAAGGGGACCAAAATCGT+GGG + Chr3:10434985-10435004 MsG0380012068.01.T01:intron 40.0%
TCATGAGTACAGCACATTAG+AGG + Chr3:10435031-10435050 MsG0380012068.01.T01:intron 40.0%
TCTACTTACTTCAACTGAGG+TGG + Chr3:10431976-10431995 MsG0380012068.01.T01:CDS 40.0%
TCTCAAACTCTCCAAACCTT+GGG + Chr3:10434810-10434829 MsG0380012068.01.T01:intron 40.0%
TCTGACTAGATAATCCAGTG+AGG - Chr3:10432799-10432818 None:intergenic 40.0%
TGAATTAGGACAGGACTTTG+AGG + Chr3:10435428-10435447 MsG0380012068.01.T01:intron 40.0%
TGACAACACATCTTGTTCAC+AGG - Chr3:10429431-10429450 None:intergenic 40.0%
TGACTCAAATGTAGGGAGTA+GGG - Chr3:10431234-10431253 None:intergenic 40.0%
TGAGCAAATAAGATGGGAGT+AGG - Chr3:10434776-10434795 None:intergenic 40.0%
TGAGCCTTGCAATAAAGTCT+TGG - Chr3:10433775-10433794 None:intergenic 40.0%
TGAGGTGGTTGAACAAATGT+CGG + Chr3:10431991-10432010 MsG0380012068.01.T01:CDS 40.0%
TGATATTGCTGCTGCATCTT+TGG + Chr3:10432123-10432142 MsG0380012068.01.T01:CDS 40.0%
TGATGCTGAACAACAGTTTC+TGG - Chr3:10432409-10432428 None:intergenic 40.0%
TTCTTGTATGGTTGTGCTGT+TGG + Chr3:10433939-10433958 MsG0380012068.01.T01:CDS 40.0%
TTGAGGTGGACAATTGTCAA+AGG + Chr3:10431882-10431901 MsG0380012068.01.T01:CDS 40.0%
TTGGCACCTTCTCCAAAATA+TGG + Chr3:10428516-10428535 MsG0380012068.01.T01:CDS 40.0%
TTTCATATGAGGTGCAGAAG+TGG - Chr3:10432711-10432730 None:intergenic 40.0%
TTTGACCCAAAAGCTAAAGC+TGG + Chr3:10433538-10433557 MsG0380012068.01.T01:intron 40.0%
! ATTTTTGTCTCCCTCTTGGA+AGG + Chr3:10431385-10431404 MsG0380012068.01.T01:intron 40.0%
! CAGATTCCATACTTGCTGAA+AGG - Chr3:10429729-10429748 None:intergenic 40.0%
! CCAGAAAGATGATTTGGCTA+TGG + Chr3:10430657-10430676 MsG0380012068.01.T01:intron 40.0%
! CTAAGCAATCAGTTAGCTTC+TGG - Chr3:10428938-10428957 None:intergenic 40.0%
! CTTTTTCCCCTTGAATTTGG+TGG - Chr3:10432887-10432906 None:intergenic 40.0%
! GTTTGAAATCAACTTGGAGG+CGG + Chr3:10429978-10429997 MsG0380012068.01.T01:CDS 40.0%
! TTACCTGTTGGTGTTTCCTT+TGG + Chr3:10429814-10429833 MsG0380012068.01.T01:CDS 40.0%
! TTATTGCAGAGGTGCAATGA+AGG + Chr3:10432745-10432764 MsG0380012068.01.T01:CDS 40.0%
! TTTCATGCAAAAGGTGTGTC+TGG + Chr3:10429862-10429881 MsG0380012068.01.T01:CDS 40.0%
!! GTGGTGTCGAATTAGAGTTT+TGG - Chr3:10432087-10432106 None:intergenic 40.0%
!! TAATTGACTTCTTGGTGGTG+AGG + Chr3:10433714-10433733 MsG0380012068.01.T01:intron 40.0%
!!! AAGTTTTAGGACCCAGTAAG+CGG - Chr3:10432339-10432358 None:intergenic 40.0%
!!! GCTCAAACTTCCGTTGATTT+TGG + Chr3:10429373-10429392 MsG0380012068.01.T01:CDS 40.0%
AAACTTAGGCAACCGACCAA+AGG - Chr3:10435117-10435136 None:intergenic 45.0%
AAGACAAGTATGCTCAACCC+TGG - Chr3:10432026-10432045 None:intergenic 45.0%
AATATCCTGCTCCAAAGCAC+AGG - Chr3:10435808-10435827 None:intergenic 45.0%
AATTGCACTTCGTGTGAAGC+AGG + Chr3:10429675-10429694 MsG0380012068.01.T01:CDS 45.0%
ACATCCTCTTCACCTGGATT+GGG + Chr3:10434859-10434878 MsG0380012068.01.T01:intron 45.0%
ACTAACACATCCTCTTCACC+TGG + Chr3:10434853-10434872 MsG0380012068.01.T01:intron 45.0%
ACTTTGGGTACCTAACAACC+AGG - Chr3:10433632-10433651 None:intergenic 45.0%
AGAAGCTCCTCAACAGAGAA+AGG + Chr3:10434686-10434705 MsG0380012068.01.T01:intron 45.0%
AGGAAGCTGCAAGCAAGATA+AGG - Chr3:10432918-10432937 None:intergenic 45.0%
AGGTGAAGAGGATGTGTTAG+TGG - Chr3:10434854-10434873 None:intergenic 45.0%
ATGAACTGCCTTCCCAAATC+TGG - Chr3:10434252-10434271 None:intergenic 45.0%
CACATTCTCTATGTGGTGAG+AGG + Chr3:10430028-10430047 MsG0380012068.01.T01:CDS 45.0%
CAGAAAGATTTAGAAGCCGC+TGG + Chr3:10430874-10430893 MsG0380012068.01.T01:CDS 45.0%
CAGAACTGACACATGAAAGG+AGG + Chr3:10432281-10432300 MsG0380012068.01.T01:CDS 45.0%
CAGCGGCTTCTAAATCTTTC+TGG - Chr3:10430876-10430895 None:intergenic 45.0%
CCTCAAAGTCAGAGACTAAC+GGG - Chr3:10431868-10431887 None:intergenic 45.0%
CCTCAGAACTGACACATGAA+AGG + Chr3:10432278-10432297 MsG0380012068.01.T01:CDS 45.0%
CCTTTCATGTGTCAGTTCTG+AGG - Chr3:10432281-10432300 None:intergenic 45.0%
CTCAAAGTCAGAGACTAACG+GGG - Chr3:10431867-10431886 None:intergenic 45.0%
CTCTCAAACTCTCCAAACCT+TGG + Chr3:10434809-10434828 MsG0380012068.01.T01:intron 45.0%
CTCTCACCACATAGAGAATG+TGG - Chr3:10430030-10430049 None:intergenic 45.0%
CTTCCCACTTTATGCTACTG+AGG + Chr3:10433061-10433080 MsG0380012068.01.T01:intron 45.0%
GAATGCAATACACCCTCATC+GGG - Chr3:10431713-10431732 None:intergenic 45.0%
GACATGAAGTGGACCAGATT+TGG + Chr3:10434236-10434255 MsG0380012068.01.T01:CDS 45.0%
GACTAGATAATCCAGTGAGG+AGG - Chr3:10432796-10432815 None:intergenic 45.0%
GAGGATCTTACTTGCAGGTT+CGG - Chr3:10433377-10433396 None:intergenic 45.0%
GAGGATGCCTATGCAGATAT+AGG + Chr3:10429790-10429809 MsG0380012068.01.T01:CDS 45.0%
GAGTTGGCATTATGCTTCAC+GGG + Chr3:10434300-10434319 MsG0380012068.01.T01:CDS 45.0%
GATGGGAGTAGGAAGAATGA+AGG - Chr3:10434765-10434784 None:intergenic 45.0%
GCAGATATAGGCTTACCTGT+TGG + Chr3:10429802-10429821 MsG0380012068.01.T01:CDS 45.0%
GCAGATATGTGTGCTAGAGT+AGG - Chr3:10429106-10429125 None:intergenic 45.0%
GGGCGTTCAAAACTCTTCAA+TGG + Chr3:10435697-10435716 MsG0380012068.01.T01:CDS 45.0%
GGTGAAGAGGATGTGTTAGT+GGG - Chr3:10434853-10434872 None:intergenic 45.0%
GTGACTCAAATGTAGGGAGT+AGG - Chr3:10431235-10431254 None:intergenic 45.0%
GTGTGCTAGAGTAGGTCATT+GGG - Chr3:10429098-10429117 None:intergenic 45.0%
TAGTCAGAAGGAAAGGGAGT+TGG + Chr3:10432811-10432830 MsG0380012068.01.T01:CDS 45.0%
TATGTGATACGTCTGCCAAC+TGG + Chr3:10433427-10433446 MsG0380012068.01.T01:intron 45.0%
TCACACAACAAACCCGATGA+GGG + Chr3:10431698-10431717 MsG0380012068.01.T01:CDS 45.0%
TCACCACATAGAGAATGTGG+AGG - Chr3:10430027-10430046 None:intergenic 45.0%
TCACCTCCACATTCTCTATG+TGG + Chr3:10430021-10430040 MsG0380012068.01.T01:CDS 45.0%
TCCAAAGTTTCTTGTCAGGG+AGG + Chr3:10431481-10431500 MsG0380012068.01.T01:CDS 45.0%
TCCCTCTCCACCAAATTCAA+GGG + Chr3:10432877-10432896 MsG0380012068.01.T01:CDS 45.0%
TCTCCAAAGGAAACACCAAC+AGG - Chr3:10429820-10429839 None:intergenic 45.0%
TGAGAACTAATGGCACGCTT+GGG - Chr3:10431656-10431675 None:intergenic 45.0%
TGCTTCTTCAAGACACCAGT+TGG - Chr3:10433445-10433464 None:intergenic 45.0%
TGGAGGAGCTTCATCAGAAA+AGG + Chr3:10432524-10432543 MsG0380012068.01.T01:CDS 45.0%
TGGCTTCCTTTCAGCAAGTA+TGG + Chr3:10429720-10429739 MsG0380012068.01.T01:CDS 45.0%
TGTAAGAAAGCTTGTCTCCC+TGG - Chr3:10431582-10431601 None:intergenic 45.0%
TGTGTGCTAGAGTAGGTCAT+TGG - Chr3:10429099-10429118 None:intergenic 45.0%
TTAGACAGGCGGAACAGAAA+GGG - Chr3:10430193-10430212 None:intergenic 45.0%
TTCACACAACAAACCCGATG+AGG + Chr3:10431697-10431716 MsG0380012068.01.T01:CDS 45.0%
TTCCCTCTCCACCAAATTCA+AGG + Chr3:10432876-10432895 MsG0380012068.01.T01:CDS 45.0%
TTCCTTCATGTTGTGCAGCA+TGG + Chr3:10435666-10435685 MsG0380012068.01.T01:CDS 45.0%
! ACTACATGCAAAGTGCTCTG+AGG - Chr3:10433396-10433415 None:intergenic 45.0%
! AGATTTAGAAGCCGCTGGTT+AGG + Chr3:10430879-10430898 MsG0380012068.01.T01:CDS 45.0%
! ATTTAGAAGCCGCTGGTTAG+GGG + Chr3:10430881-10430900 MsG0380012068.01.T01:CDS 45.0%
! GATTTAGAAGCCGCTGGTTA+GGG + Chr3:10430880-10430899 MsG0380012068.01.T01:CDS 45.0%
! GTTAGTCTCTGACTTTGAGG+TGG + Chr3:10431868-10431887 MsG0380012068.01.T01:CDS 45.0%
! TATTGCAGCATCTGAAGCAC+TGG + Chr3:10429588-10429607 MsG0380012068.01.T01:CDS 45.0%
! TGCTGCATCTTTGGGAACAA+AGG + Chr3:10432132-10432151 MsG0380012068.01.T01:CDS 45.0%
!! GGGAGTTGGAAGCACTTATA+AGG + Chr3:10432825-10432844 MsG0380012068.01.T01:CDS 45.0%
!! TGTTCTGAAGCAAAGCTGCA+TGG - Chr3:10431794-10431813 None:intergenic 45.0%
!!! ACACCACCAGCTTTAGCTTT+TGG - Chr3:10433547-10433566 None:intergenic 45.0%
!!! CACCACCAGCTTTAGCTTTT+GGG - Chr3:10433546-10433565 None:intergenic 45.0%
!! AAATTAAAAAAATTTATAAG+TGG - Chr3:10434449-10434468 None:intergenic 5.0%
!! TTTAAAAAATAAAAAGAAAA+AGG + Chr3:10434537-10434556 MsG0380012068.01.T01:intron 5.0%
!!! TTTTCTTTTTATTTTTTAAA+AGG - Chr3:10434537-10434556 None:intergenic 5.0%
AAAGAGATCAGGCAAACCCC+TGG - Chr3:10429219-10429238 None:intergenic 50.0%
AACATGATCCCAAGTGTGCC+AGG + Chr3:10431561-10431580 MsG0380012068.01.T01:CDS 50.0%
ACAGGCATGATTGCCTGACA+TGG - Chr3:10429413-10429432 None:intergenic 50.0%
ACATGATCCCAAGTGTGCCA+GGG + Chr3:10431562-10431581 MsG0380012068.01.T01:CDS 50.0%
AGAGAATGTGGAGGTGAGTC+TGG - Chr3:10430018-10430037 None:intergenic 50.0%
AGCACACATGAGCTCTCATC+AGG - Chr3:10431623-10431642 None:intergenic 50.0%
AGGAAAAATGGGCAGGCTCT+TGG - Chr3:10431190-10431209 None:intergenic 50.0%
AGGTTATCCAAGCCCAATCC+AGG - Chr3:10434874-10434893 None:intergenic 50.0%
ATTTGCATGCTCGGATGCAG+AGG - Chr3:10432170-10432189 None:intergenic 50.0%
CAAGGGAAGAAGGTGGATAC+AGG + Chr3:10428568-10428587 MsG0380012068.01.T01:CDS 50.0%
CACATCCTCTTCACCTGGAT+TGG + Chr3:10434858-10434877 MsG0380012068.01.T01:intron 50.0%
CAGAAAGGGCAAGGTGAAGA+AGG - Chr3:10430179-10430198 None:intergenic 50.0%
CCAAACCTTGGGCTTAGCAA+AGG + Chr3:10434821-10434840 MsG0380012068.01.T01:intron 50.0%
CCCTCTCCACCAAATTCAAG+GGG + Chr3:10432878-10432897 MsG0380012068.01.T01:CDS 50.0%
CCTTTGCTAAGCCCAAGGTT+TGG - Chr3:10434824-10434843 None:intergenic 50.0%
CGTCTTGAGGGGTTAGAAGA+TGG + Chr3:10429700-10429719 MsG0380012068.01.T01:CDS 50.0%
CTCCATGCTGCACAACATGA+AGG - Chr3:10435671-10435690 None:intergenic 50.0%
CTCTAACTGCCTAGCCGTAA+GGG + Chr3:10434713-10434732 MsG0380012068.01.T01:intron 50.0%
CTGAGAACTAATGGCACGCT+TGG - Chr3:10431657-10431676 None:intergenic 50.0%
CTGCATAGGCATCCTCCATA+AGG - Chr3:10429786-10429805 None:intergenic 50.0%
CTTAGACAGGCGGAACAGAA+AGG - Chr3:10430194-10430213 None:intergenic 50.0%
CTTCATGTTGTGCAGCATGG+AGG + Chr3:10435669-10435688 MsG0380012068.01.T01:CDS 50.0%
GAAGTGGACCAGATTTGGGA+AGG + Chr3:10434241-10434260 MsG0380012068.01.T01:CDS 50.0%
GACCCAAAAGCTAAAGCTGG+TGG + Chr3:10433541-10433560 MsG0380012068.01.T01:intron 50.0%
GAGAACTAATGGCACGCTTG+GGG - Chr3:10431655-10431674 None:intergenic 50.0%
GCATTCTAACCCTTACGGCT+AGG - Chr3:10434725-10434744 None:intergenic 50.0%
GCCTCCCTGACAAGAAACTT+TGG - Chr3:10431485-10431504 None:intergenic 50.0%
GTGAACCTTTGCTAAGCCCA+AGG - Chr3:10434829-10434848 None:intergenic 50.0%
GTGTTTGGAGGGAAGGGAAA+GGG + Chr3:10435331-10435350 MsG0380012068.01.T01:intron 50.0%
GTTAGGGGGTTGGACATCTA+AGG + Chr3:10430896-10430915 MsG0380012068.01.T01:CDS 50.0%
TCACCTGAAGTCCTGTGCTT+TGG + Chr3:10435794-10435813 MsG0380012068.01.T01:CDS 50.0%
TCTCTAACTGCCTAGCCGTA+AGG + Chr3:10434712-10434731 MsG0380012068.01.T01:intron 50.0%
TTTGCATGCTCGGATGCAGA+GGG - Chr3:10432169-10432188 None:intergenic 50.0%
! CCCCTTGAATTTGGTGGAGA+GGG - Chr3:10432881-10432900 None:intergenic 50.0%
! CCCGTTAGTCTCTGACTTTG+AGG + Chr3:10431865-10431884 MsG0380012068.01.T01:CDS 50.0%
! CTTAGTGTTGCTCCATCTCC+TGG + Chr3:10428630-10428649 MsG0380012068.01.T01:CDS 50.0%
! GGAGTATTTGCGCCCAAATC+AGG - Chr3:10430072-10430091 None:intergenic 50.0%
! TCCCCTTGAATTTGGTGGAG+AGG - Chr3:10432882-10432901 None:intergenic 50.0%
! TTTAGAAGCCGCTGGTTAGG+GGG + Chr3:10430882-10430901 MsG0380012068.01.T01:CDS 50.0%
!! CAGGACTTTGAGGGTTTTGG+AGG + Chr3:10435438-10435457 MsG0380012068.01.T01:intron 50.0%
!! GCTCTGAGGATCTTACTTGC+AGG - Chr3:10433382-10433401 None:intergenic 50.0%
!! GCTTTGGTGTTTGGAGGGAA+GGG + Chr3:10435325-10435344 MsG0380012068.01.T01:intron 50.0%
!! GGACAGGACTTTGAGGGTTT+TGG + Chr3:10435435-10435454 MsG0380012068.01.T01:intron 50.0%
!! TGCTTTGGTGTTTGGAGGGA+AGG + Chr3:10435324-10435343 MsG0380012068.01.T01:intron 50.0%
!! TGTTGAGGAGCTTCTAGCTC+TGG - Chr3:10434681-10434700 None:intergenic 50.0%
!! TTCGGAGCACCGATGAAGAA+AGG + Chr3:10435724-10435743 MsG0380012068.01.T01:CDS 50.0%
!!! TTTTAGGACCCAGTAAGCGG+TGG - Chr3:10432336-10432355 None:intergenic 50.0%
AAAATGGGCAGGCTCTTGGC+AGG - Chr3:10431186-10431205 None:intergenic 55.0%
AGCACACGTGAGTGCTCATC+TGG - Chr3:10431539-10431558 None:intergenic 55.0%
AGGGAAGGGAAAGGGTTGAG+AGG + Chr3:10435339-10435358 MsG0380012068.01.T01:intron 55.0%
AGGGAGTAGGGACAATGTGC+AGG - Chr3:10431222-10431241 None:intergenic 55.0%
ATGTCCAACCCCCTAACCAG+CGG - Chr3:10430893-10430912 None:intergenic 55.0%
CAAGCCCAATCCAGGTGAAG+AGG - Chr3:10434866-10434885 None:intergenic 55.0%
CATGTTGTGCAGCATGGAGG+TGG + Chr3:10435672-10435691 MsG0380012068.01.T01:CDS 55.0%
CTTGTCTCCCTGGCACACTT+GGG - Chr3:10431572-10431591 None:intergenic 55.0%
GCTCCAAAGCACAGGACTTC+AGG - Chr3:10435800-10435819 None:intergenic 55.0%
GGTAGAGAGTTCCTCCTCAC+TGG + Chr3:10432782-10432801 MsG0380012068.01.T01:CDS 55.0%
GGTGTTTGGAGGGAAGGGAA+AGG + Chr3:10435330-10435349 MsG0380012068.01.T01:intron 55.0%
GTGAAGCAGGCACGTCTTGA+GGG + Chr3:10429688-10429707 MsG0380012068.01.T01:CDS 55.0%
TGAAGCAGGCACGTCTTGAG+GGG + Chr3:10429689-10429708 MsG0380012068.01.T01:CDS 55.0%
TGTGAAGCAGGCACGTCTTG+AGG + Chr3:10429687-10429706 MsG0380012068.01.T01:CDS 55.0%
TTGTGCAGCATGGAGGTGGA+CGG + Chr3:10435676-10435695 MsG0380012068.01.T01:CDS 55.0%
! CTCTTCACCTGGATTGGGCT+TGG + Chr3:10434864-10434883 MsG0380012068.01.T01:intron 55.0%
!! GAAGTCCTGTGCTTTGGAGC+AGG + Chr3:10435800-10435819 MsG0380012068.01.T01:CDS 55.0%
AGGACACGCCACCGCTTACT+GGG + Chr3:10432325-10432344 MsG0380012068.01.T01:CDS 60.0%
CAGGCGGAACAGAAAGGGCA+AGG - Chr3:10430188-10430207 None:intergenic 60.0%
GCTTGTCTCCCTGGCACACT+TGG - Chr3:10431573-10431592 None:intergenic 60.0%
GTAAGCGGTGGCGTGTCCTA+TGG - Chr3:10432324-10432343 None:intergenic 60.0%
TAGGACACGCCACCGCTTAC+TGG + Chr3:10432324-10432343 MsG0380012068.01.T01:CDS 60.0%
TGTGCAGCATGGAGGTGGAC+GGG + Chr3:10435677-10435696 MsG0380012068.01.T01:CDS 60.0%
! GAAGCCGCTGGTTAGGGGGT+TGG + Chr3:10430886-10430905 MsG0380012068.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 10428516 10435970 10428516 ID=MsG0380012068.01;Name=MsG0380012068.01
Chr3 mRNA 10428516 10435970 10428516 ID=MsG0380012068.01.T01;Parent=MsG0380012068.01;Name=MsG0380012068.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0|0|1|1|1|10|0|1072
Chr3 exon 10428516 10428656 10428516 ID=MsG0380012068.01.T01:exon:20987;Parent=MsG0380012068.01.T01
Chr3 exon 10429256 10430167 10429256 ID=MsG0380012068.01.T01:exon:20988;Parent=MsG0380012068.01.T01
Chr3 exon 10430661 10430748 10430661 ID=MsG0380012068.01.T01:exon:20989;Parent=MsG0380012068.01.T01
Chr3 exon 10430835 10430917 10430835 ID=MsG0380012068.01.T01:exon:20990;Parent=MsG0380012068.01.T01
Chr3 exon 10431407 10432580 10431407 ID=MsG0380012068.01.T01:exon:20991;Parent=MsG0380012068.01.T01
Chr3 exon 10432672 10432958 10432672 ID=MsG0380012068.01.T01:exon:20992;Parent=MsG0380012068.01.T01
Chr3 exon 10433924 10434030 10433924 ID=MsG0380012068.01.T01:exon:20993;Parent=MsG0380012068.01.T01
Chr3 exon 10434211 10434361 10434211 ID=MsG0380012068.01.T01:exon:20994;Parent=MsG0380012068.01.T01
Chr3 exon 10435630 10435836 10435630 ID=MsG0380012068.01.T01:exon:20995;Parent=MsG0380012068.01.T01
Chr3 exon 10435902 10435970 10435902 ID=MsG0380012068.01.T01:exon:20996;Parent=MsG0380012068.01.T01
Chr3 CDS 10428516 10428656 10428516 ID=MsG0380012068.01.T01:cds;Parent=MsG0380012068.01.T01
Chr3 CDS 10429256 10430167 10429256 ID=MsG0380012068.01.T01:cds;Parent=MsG0380012068.01.T01
Chr3 CDS 10430661 10430748 10430661 ID=MsG0380012068.01.T01:cds;Parent=MsG0380012068.01.T01
Chr3 CDS 10430835 10430917 10430835 ID=MsG0380012068.01.T01:cds;Parent=MsG0380012068.01.T01
Chr3 CDS 10431407 10432580 10431407 ID=MsG0380012068.01.T01:cds;Parent=MsG0380012068.01.T01
Chr3 CDS 10432672 10432958 10432672 ID=MsG0380012068.01.T01:cds;Parent=MsG0380012068.01.T01
Chr3 CDS 10433924 10434030 10433924 ID=MsG0380012068.01.T01:cds;Parent=MsG0380012068.01.T01
Chr3 CDS 10434211 10434361 10434211 ID=MsG0380012068.01.T01:cds;Parent=MsG0380012068.01.T01
Chr3 CDS 10435630 10435836 10435630 ID=MsG0380012068.01.T01:cds;Parent=MsG0380012068.01.T01
Chr3 CDS 10435902 10435970 10435902 ID=MsG0380012068.01.T01:cds;Parent=MsG0380012068.01.T01
Gene Sequence

>MsG0380012068.01.T01

TTGGCACCTTCTCCAAAATATGGTATTGATGTCAAAGACTTCGATGTATTATCAAGGGAAGAAGGTGGATACAGGAGTTGCCATTTATTCTTATCTGGAAGCGATAGTTCATCTCTTAGTGTTGCTCCATCTCCTGGAAATGTGTTTCAGTTTAGTCTGCATCTTTCTTCAGATGTCGATTCATTCGTTTGCCCAACCCAAGATTTGAATCAATCTCATCATGCAGTTGCACCAAGTAAAGCTTTGTCATTACAACCTGCTCAAACTTCCGTTGATTTTGGAGAGAATATGCATTCCATGTCAGGCAATCATGCCTGTGAACAAGATGTGTTGTCAACATTCATTCCTAAAACAACGAAAAAAAATTCTTTAAAATCTCTCATCGATACAAATGATTCTGTTAAACAACAGAAAGAAAAATCGAAAGTCGAATGTTTCGAAAATAATGATATCAGTGATGCAGTTGAACTTTCTATTGCAGCATCTGAAGCACTGGTCATACATGACTTAATAAAAATGGAGTCAGTATCAGAAACATTGAGTACAGAAGCTGTACTTGAAATTGCACTTCGTGTGAAGCAGGCACGTCTTGAGGGGTTAGAAGATGGCTTCCTTTCAGCAAGTATGGAATCTGACTGTAGTGATTCCCTTTCCGATTTAAACGATTTCCTTATGGAGGATGCCTATGCAGATATAGGCTTACCTGTTGGTGTTTCCTTTGGAGAAAATCTTTCCAATTCAAATGTATTTCATGCAAAAGGTGTGTCTGGTGATGAAAATTATAATGGAGGCAATAATAAACATAATGATAGAGAGCTTACATCTCAACTTGCCAAGTTTGATGATAAATCTGAACAAAAGAAGTTTGAAATCAACTTGGAGGCGGAAGTGCAGCGAATTCCAGACTCACCTCCACATTCTCTATGTGGTGAGAGGGTAATGCATTCTGATGATCCTGATTTGGGCGCAAATACTCCTAAACATTTTGTGAATGATCTTTTTACATCTAATCAGTACAAAGAGAATAATACCAATGATTTAGCCCTCAACAAAAAAGATGATTTGGCTATGGCTGATTTTACTTCTATCAAGCCACAACACAGTGTTAACTCTTCACGTTTTCAGACTTCTGAAAATTTCAAAGATGTGAAAAACGAGAACTGGGCAGCTTACCTAGCTCCAGAAAGATTTAGAAGCCGCTGGTTAGGGGGTTGGACATCTAAGGAATTAGATTCACCTTCATTGCTCGATTCAAAAAAAGCTTCACCTTCATTGAACCTGAAAAATGAAAAACGGATTCCAAAGTTTCTTGTCAGGGAGGCAAGCTTTCTTACAGAATCTGCAGACATTATTCCAGATGAGCACTCACGTGTGCTGAAACATGATCCCAAGTGTGCCAGGGAGACAAGCTTTCTTACAGAATCAGTAGATATTGTTCCTGATGAGAGCTCATGTGTGCTGAAACATGACCCCAAGCGTGCCATTAGTTCTCAGCTAAGTATGCACTGTCAAGTTTCACACAACAAACCCGATGAGGGTGTATTGCATTCTCAAGATATGGTTGGATGTTCTAGTCTGTCATTGAACGATCCTCTTTGTTCAGTTGTTCCATGCAGCTTTGCTTCAGAACATGACAATTATGAAACTCATATTGACAACGAAAACGATACAGAGTATTTGGCCCCGTTAGTCTCTGACTTTGAGGTGGACAATTGTCAAAGGATCTCAGATAAGAATACTACATTCGACTGTAGAGATGAGAAAATCACATCTATAATAGATTGTAAAGATATTCTACTTACTTCAACTGAGGTGGTTGAACAAATGTCGGAGAAGTTAACCAGGGTTGAGCATACTTGTCTTACGACTTATAGCATGATCTTACCAAACCAAGATGTTAACCAAAACTCTAATTCGACACCACTTTCAACTAACCAAAGTGATATTGCTGCTGCATCTTTGGGAACAAAGGTTTCAGAGTCTCCCTCTGCATCCGAGCATGCAAATGAAAACAAAAATGAAGTAAATCATCAACATTCGATTGATCAAAAGTCAATTATACAAATAACCGATGACAAGAGTGATGAGTTAAAAGCCTCAGAACTGACACATGAAAGGAGGTCACCTATTAATCTAAACCATAGGACACGCCACCGCTTACTGGGTCCTAAAACTTCTGTAAATGATATCAGTATAGAGAAAAATATAAACCAATATGTAGTACCAGAAACTGTTGTTCAGCATCAACAGAACAATAATCTTATTATGGTACAAGTTGAGTGCAATAAATCCGTTGATGGACATGTTAAAGTCAGAAAGCAAGTACATTTCTCAGATAAAGTGGAGGAGCTTCATCAGAAAAGGAAATTGTCAAAGTTGGAATCTTCAGATAAAAAATGTTCATCTATTAGAGCAAAAAGGCAACGGTCATTGACCACTTCTGCACCTCATATGAAACATTCTTTGACAAATTATTGCAGAGGTGCAATGAAGGAATTCATATTTCGAGGTAGAGAGTTCCTCCTCACTGGATTATCTAGTCAGAAGGAAAGGGAGTTGGAAGCACTTATAAGGAATTCTGGTGGGGTTATACTTTATGATATTCCCTCTCCACCAAATTCAAGGGGAAAAAGAAGTTCAACCTTATCTTGCTTGCAGCTTCCTATTATTCTATGTAACAAAAAGCTGCAAACCGCCAAATTCTTGTATGGTTGTGCTGTTGGTGCTTCAATACTAAGAGTTGACTGGCTAACTGATTGTCTTGCATCTGGAACTATTTTGCTACCTGACAAATACATGATTCTTCCAAATCGAAATGACATGAAGTGGACCAGATTTGGGAAGGCAGTTCATCGCAGAAACCAAAAGCATATTTTTGAAAGAGTTGGCATTATGCTTCACGGGAAGCATAGTTTCTGCACCAAATTTGCATGTATCATCAAGTCTGAACTTACTCCTCTCTCCCTTTTCCATTTTTTTTTCCTTCATGTTGTGCAGCATGGAGGTGGACGGGCGTTCAAAACTCTTCAATGGTTAGTTCGGAGCACCGATGAAGAAAGGACTTTGATGGGAGCTATTGTAGTTGAAGAAAAGGCTACGATATCACGTCACCTGAAGTCCTGTGCTTTGGAGCAGGATATTCCTATTATGGAAGAATGTTATTGGTCGTGCATTAACATGCTCAAGAATTCTGCTATTTATAAAGAATCTCTCATATGA
Protein sequence

>MsG0380012068.01.T01

LAPSPKYGIDVKDFDVLSREEGGYRSCHLFLSGSDSSSLSVAPSPGNVFQFSLHLSSDVDSFVCPTQDLNQSHHAVAPSKALSLQPAQTSVDFGENMHSMSGNHACEQDVLSTFIPKTTKKNSLKSLIDTNDSVKQQKEKSKVECFENNDISDAVELSIAASEALVIHDLIKMESVSETLSTEAVLEIALRVKQARLEGLEDGFLSASMESDCSDSLSDLNDFLMEDAYADIGLPVGVSFGENLSNSNVFHAKGVSGDENYNGGNNKHNDRELTSQLAKFDDKSEQKKFEINLEAEVQRIPDSPPHSLCGERVMHSDDPDLGANTPKHFVNDLFTSNQYKENNTNDLALNKKDDLAMADFTSIKPQHSVNSSRFQTSENFKDVKNENWAAYLAPERFRSRWLGGWTSKELDSPSLLDSKKASPSLNLKNEKRIPKFLVREASFLTESADIIPDEHSRVLKHDPKCARETSFLTESVDIVPDESSCVLKHDPKRAISSQLSMHCQVSHNKPDEGVLHSQDMVGCSSLSLNDPLCSVVPCSFASEHDNYETHIDNENDTEYLAPLVSDFEVDNCQRISDKNTTFDCRDEKITSIIDCKDILLTSTEVVEQMSEKLTRVEHTCLTTYSMILPNQDVNQNSNSTPLSTNQSDIAAASLGTKVSESPSASEHANENKNEVNHQHSIDQKSIIQITDDKSDELKASELTHERRSPINLNHRTRHRLLGPKTSVNDISIEKNINQYVVPETVVQHQQNNNLIMVQVECNKSVDGHVKVRKQVHFSDKVEELHQKRKLSKLESSDKKCSSIRAKRQRSLTTSAPHMKHSLTNYCRGAMKEFIFRGREFLLTGLSSQKERELEALIRNSGGVILYDIPSPPNSRGKRSSTLSCLQLPIILCNKKLQTAKFLYGCAVGASILRVDWLTDCLASGTILLPDKYMILPNRNDMKWTRFGKAVHRRNQKHIFERVGIMLHGKHSFCTKFACIIKSELTPLSLFHFFFLHVVQHGGGRAFKTLQWLVRSTDEERTLMGAIVVEEKATISRHLKSCALEQDIPIMEECYWSCINMLKNSAIYKESLI*