Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012280.01.T01 | XP_003598766.1 | 98.214 | 280 | 5 | 0 | 1 | 280 | 1 | 280 | 0 | 561 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012280.01.T01 | Q9C826 | 68.889 | 270 | 81 | 1 | 14 | 280 | 16 | 285 | 1.16E-132 | 380 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012280.01.T01 | G7IW74 | 98.214 | 280 | 5 | 0 | 1 | 280 | 1 | 280 | 0.0 | 561 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780041397.01 | MsG0380012280.01 | PPI |
| MsG0780041253.01 | MsG0380012280.01 | PPI |
| MsG0680032061.01 | MsG0380012280.01 | PPI |
| MsG0480021903.01 | MsG0380012280.01 | PPI |
| MsG0780039355.01 | MsG0380012280.01 | PPI |
| MsG0780040060.01 | MsG0380012280.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012280.01.T01 | MTR_3g020670 | 98.214 | 280 | 5 | 0 | 1 | 280 | 1 | 280 | 0.0 | 561 |
| MsG0380012280.01.T01 | MTR_7g071680 | 51.042 | 288 | 125 | 5 | 2 | 276 | 16 | 300 | 4.64e-89 | 267 |
| MsG0380012280.01.T01 | MTR_4g052340 | 48.897 | 272 | 129 | 2 | 8 | 279 | 6 | 267 | 1.20e-83 | 252 |
| MsG0380012280.01.T01 | MTR_4g052350 | 49.446 | 271 | 127 | 3 | 10 | 280 | 8 | 268 | 2.34e-82 | 249 |
| MsG0380012280.01.T01 | MTR_4g052320 | 49.057 | 265 | 126 | 2 | 15 | 279 | 7 | 262 | 1.47e-81 | 246 |
| MsG0380012280.01.T01 | MTR_4g052300 | 48.872 | 266 | 126 | 3 | 15 | 280 | 7 | 262 | 1.42e-79 | 241 |
| MsG0380012280.01.T01 | MTR_7g105460 | 48.736 | 277 | 130 | 4 | 8 | 280 | 2 | 270 | 1.40e-74 | 229 |
| MsG0380012280.01.T01 | MTR_7g107670 | 45.525 | 257 | 137 | 2 | 14 | 270 | 31 | 284 | 1.18e-71 | 223 |
| MsG0380012280.01.T01 | MTR_7g083870 | 46.970 | 264 | 124 | 4 | 14 | 270 | 33 | 287 | 1.23e-71 | 223 |
| MsG0380012280.01.T01 | MTR_4g078630 | 45.091 | 275 | 144 | 4 | 1 | 273 | 5 | 274 | 3.05e-70 | 218 |
| MsG0380012280.01.T01 | MTR_7g110130 | 45.977 | 261 | 133 | 3 | 14 | 273 | 4 | 257 | 8.63e-69 | 214 |
| MsG0380012280.01.T01 | MTR_7g110140 | 48.450 | 258 | 122 | 5 | 15 | 270 | 5 | 253 | 1.39e-68 | 213 |
| MsG0380012280.01.T01 | MTR_2g090165 | 45.283 | 265 | 134 | 5 | 14 | 276 | 4 | 259 | 4.07e-65 | 204 |
| MsG0380012280.01.T01 | MTR_7g105580 | 40.824 | 267 | 125 | 4 | 13 | 275 | 5 | 242 | 6.01e-63 | 199 |
| MsG0380012280.01.T01 | MTR_7g105590 | 50.811 | 185 | 90 | 1 | 14 | 198 | 6 | 189 | 3.51e-62 | 195 |
| MsG0380012280.01.T01 | MTR_6g023590 | 43.411 | 258 | 135 | 5 | 15 | 269 | 12 | 261 | 7.58e-61 | 194 |
| MsG0380012280.01.T01 | MTR_7g110160 | 44.151 | 265 | 121 | 4 | 14 | 277 | 4 | 242 | 1.16e-60 | 192 |
| MsG0380012280.01.T01 | MTR_6g035395 | 44.402 | 259 | 120 | 5 | 14 | 270 | 3 | 239 | 3.03e-59 | 189 |
| MsG0380012280.01.T01 | MTR_6g023990 | 42.636 | 258 | 137 | 5 | 15 | 269 | 13 | 262 | 1.39e-58 | 188 |
| MsG0380012280.01.T01 | MTR_6g023950 | 42.471 | 259 | 140 | 5 | 15 | 271 | 12 | 263 | 2.48e-55 | 179 |
| MsG0380012280.01.T01 | MTR_6g023600 | 42.537 | 268 | 141 | 6 | 6 | 269 | 3 | 261 | 3.76e-55 | 179 |
| MsG0380012280.01.T01 | MTR_6g023610 | 38.235 | 272 | 159 | 4 | 7 | 276 | 4 | 268 | 2.81e-54 | 177 |
| MsG0380012280.01.T01 | MTR_7g105570 | 53.158 | 190 | 81 | 2 | 92 | 280 | 45 | 227 | 1.54e-53 | 174 |
| MsG0380012280.01.T01 | MTR_6g023600 | 42.537 | 268 | 135 | 7 | 6 | 269 | 3 | 255 | 6.17e-53 | 173 |
| MsG0380012280.01.T01 | MTR_6g023910 | 38.346 | 266 | 155 | 4 | 6 | 269 | 3 | 261 | 4.83e-52 | 171 |
| MsG0380012280.01.T01 | MTR_3g113870 | 43.386 | 189 | 105 | 1 | 24 | 212 | 29 | 215 | 8.88e-50 | 164 |
| MsG0380012280.01.T01 | MTR_4g084800 | 46.154 | 143 | 73 | 2 | 8 | 147 | 2 | 143 | 1.08e-36 | 128 |
| MsG0380012280.01.T01 | MTR_3g085740 | 31.295 | 278 | 162 | 8 | 1 | 269 | 61 | 318 | 4.62e-28 | 110 |
| MsG0380012280.01.T01 | MTR_1g082760 | 30.827 | 266 | 162 | 6 | 12 | 268 | 36 | 288 | 1.84e-27 | 108 |
| MsG0380012280.01.T01 | MTR_7g113650 | 30.075 | 266 | 164 | 6 | 12 | 268 | 36 | 288 | 6.42e-26 | 103 |
| MsG0380012280.01.T01 | MTR_4g132850 | 34.483 | 261 | 149 | 9 | 14 | 269 | 5 | 248 | 2.04e-25 | 101 |
| MsG0380012280.01.T01 | MTR_7g094520 | 30.112 | 269 | 170 | 5 | 8 | 269 | 2 | 259 | 4.06e-25 | 100 |
| MsG0380012280.01.T01 | MTR_7g094510 | 32.234 | 273 | 142 | 8 | 16 | 269 | 6 | 254 | 8.95e-25 | 100 |
| MsG0380012280.01.T01 | MTR_4g064887 | 31.136 | 273 | 163 | 9 | 6 | 270 | 5 | 260 | 9.30e-25 | 100 |
| MsG0380012280.01.T01 | MTR_3g068070 | 31.518 | 257 | 163 | 6 | 16 | 270 | 15 | 260 | 2.27e-24 | 99.4 |
| MsG0380012280.01.T01 | MTR_4g131740 | 29.213 | 267 | 166 | 7 | 12 | 268 | 36 | 289 | 1.43e-23 | 97.8 |
| MsG0380012280.01.T01 | MTR_3g068155 | 32.472 | 271 | 168 | 8 | 4 | 270 | 5 | 264 | 1.79e-23 | 97.1 |
| MsG0380012280.01.T01 | MTR_3g068085 | 32.308 | 260 | 157 | 9 | 16 | 270 | 15 | 260 | 1.83e-23 | 97.1 |
| MsG0380012280.01.T01 | MTR_8g442750 | 32.155 | 283 | 160 | 10 | 7 | 273 | 3 | 269 | 4.21e-23 | 96.7 |
| MsG0380012280.01.T01 | MTR_1196s0010 | 29.389 | 262 | 153 | 6 | 19 | 271 | 277 | 515 | 9.99e-22 | 94.7 |
| MsG0380012280.01.T01 | MTR_4g058810 | 30.112 | 269 | 166 | 7 | 12 | 270 | 7 | 263 | 2.11e-21 | 91.3 |
| MsG0380012280.01.T01 | MTR_4g058840 | 30.657 | 274 | 158 | 8 | 12 | 270 | 7 | 263 | 2.56e-21 | 91.3 |
| MsG0380012280.01.T01 | MTR_4g058820 | 30.657 | 274 | 158 | 8 | 12 | 270 | 7 | 263 | 2.56e-21 | 91.3 |
| MsG0380012280.01.T01 | MTR_3g068175 | 33.721 | 258 | 156 | 8 | 16 | 270 | 17 | 262 | 1.44e-20 | 89.0 |
| MsG0380012280.01.T01 | MTR_3g068065 | 31.154 | 260 | 160 | 8 | 16 | 270 | 17 | 262 | 2.21e-20 | 88.6 |
| MsG0380012280.01.T01 | MTR_4g064883 | 31.154 | 260 | 160 | 8 | 16 | 270 | 14 | 259 | 1.76e-19 | 85.9 |
| MsG0380012280.01.T01 | MTR_3g068175 | 33.206 | 262 | 156 | 9 | 16 | 270 | 17 | 266 | 2.16e-18 | 83.2 |
| MsG0380012280.01.T01 | MTR_1g051165 | 29.562 | 274 | 166 | 9 | 12 | 270 | 10 | 271 | 2.79e-18 | 82.8 |
| MsG0380012280.01.T01 | MTR_7g063330 | 33.588 | 262 | 154 | 8 | 16 | 270 | 15 | 263 | 7.56e-18 | 81.3 |
| MsG0380012280.01.T01 | MTR_4g064887 | 31.579 | 209 | 127 | 6 | 6 | 206 | 5 | 205 | 5.43e-17 | 78.2 |
| MsG0380012280.01.T01 | MTR_7g063320 | 32.830 | 265 | 151 | 9 | 16 | 269 | 15 | 263 | 6.99e-17 | 78.6 |
| MsG0380012280.01.T01 | MTR_4g097510 | 29.231 | 195 | 133 | 5 | 19 | 212 | 5 | 195 | 1.13e-16 | 78.6 |
| MsG0380012280.01.T01 | MTR_7g063270 | 31.128 | 257 | 167 | 6 | 16 | 270 | 16 | 264 | 3.39e-16 | 77.0 |
| MsG0380012280.01.T01 | MTR_4g064883 | 34.359 | 195 | 118 | 6 | 16 | 205 | 14 | 203 | 5.17e-16 | 75.5 |
| MsG0380012280.01.T01 | MTR_4g086400 | 31.364 | 220 | 131 | 8 | 18 | 223 | 6 | 219 | 1.24e-15 | 77.0 |
| MsG0380012280.01.T01 | MTR_7g063260 | 31.128 | 257 | 168 | 5 | 16 | 270 | 16 | 265 | 2.39e-15 | 74.3 |
| MsG0380012280.01.T01 | MTR_1g068955 | 28.626 | 262 | 163 | 7 | 16 | 267 | 14 | 261 | 2.45e-15 | 74.7 |
| MsG0380012280.01.T01 | MTR_8g096580 | 30.500 | 200 | 129 | 6 | 19 | 213 | 48 | 242 | 5.39e-15 | 74.3 |
| MsG0380012280.01.T01 | MTR_4g086410 | 32.589 | 224 | 123 | 10 | 18 | 223 | 6 | 219 | 1.36e-14 | 73.9 |
| MsG0380012280.01.T01 | MTR_7g063360 | 30.350 | 257 | 170 | 5 | 16 | 270 | 16 | 265 | 4.04e-14 | 70.9 |
| MsG0380012280.01.T01 | MTR_3g087850 | 29.255 | 188 | 124 | 5 | 20 | 205 | 30 | 210 | 1.03e-13 | 70.1 |
| MsG0380012280.01.T01 | MTR_3g087860 | 29.861 | 144 | 96 | 3 | 63 | 205 | 56 | 195 | 6.16e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012280.01.T01 | AT1G52340 | 68.889 | 270 | 81 | 1 | 14 | 280 | 16 | 285 | 1.19e-133 | 380 |
| MsG0380012280.01.T01 | AT3G51680 | 48.897 | 272 | 130 | 4 | 8 | 270 | 24 | 295 | 7.22e-76 | 233 |
| MsG0380012280.01.T01 | AT3G26770 | 47.328 | 262 | 128 | 5 | 13 | 270 | 38 | 293 | 1.86e-74 | 230 |
| MsG0380012280.01.T01 | AT2G47130 | 44.747 | 257 | 132 | 4 | 15 | 270 | 5 | 252 | 1.06e-68 | 214 |
| MsG0380012280.01.T01 | AT3G29250 | 45.914 | 257 | 130 | 4 | 15 | 270 | 5 | 253 | 1.06e-68 | 214 |
| MsG0380012280.01.T01 | AT3G29250 | 45.113 | 266 | 137 | 4 | 6 | 270 | 34 | 291 | 2.19e-68 | 214 |
| MsG0380012280.01.T01 | AT3G26760 | 43.446 | 267 | 139 | 4 | 10 | 270 | 30 | 290 | 4.08e-68 | 214 |
| MsG0380012280.01.T01 | AT3G29250 | 45.914 | 257 | 130 | 4 | 15 | 270 | 41 | 289 | 7.99e-68 | 213 |
| MsG0380012280.01.T01 | AT4G03140 | 45.525 | 257 | 137 | 3 | 14 | 270 | 76 | 329 | 1.15e-67 | 214 |
| MsG0380012280.01.T01 | AT3G29260 | 44.186 | 258 | 134 | 4 | 14 | 270 | 4 | 252 | 7.88e-66 | 206 |
| MsG0380012280.01.T01 | AT2G47140 | 43.023 | 258 | 138 | 4 | 14 | 270 | 4 | 253 | 3.69e-65 | 204 |
| MsG0380012280.01.T01 | AT2G47120 | 43.580 | 257 | 134 | 6 | 15 | 270 | 6 | 252 | 9.15e-62 | 196 |
| MsG0380012280.01.T01 | AT2G47120 | 43.580 | 257 | 134 | 6 | 15 | 270 | 5 | 251 | 9.79e-62 | 196 |
| MsG0380012280.01.T01 | AT3G42960 | 41.791 | 268 | 147 | 6 | 14 | 277 | 6 | 268 | 4.70e-51 | 169 |
| MsG0380012280.01.T01 | AT5G18210 | 31.461 | 267 | 159 | 7 | 16 | 271 | 8 | 261 | 3.25e-26 | 103 |
| MsG0380012280.01.T01 | AT2G29310 | 33.582 | 268 | 157 | 8 | 16 | 277 | 7 | 259 | 8.52e-26 | 102 |
| MsG0380012280.01.T01 | AT5G06060 | 31.907 | 257 | 162 | 6 | 16 | 270 | 9 | 254 | 9.43e-26 | 102 |
| MsG0380012280.01.T01 | AT2G30670 | 32.584 | 267 | 161 | 8 | 16 | 277 | 7 | 259 | 2.30e-25 | 101 |
| MsG0380012280.01.T01 | AT1G24360 | 30.657 | 274 | 168 | 8 | 2 | 269 | 60 | 317 | 7.61e-25 | 101 |
| MsG0380012280.01.T01 | AT4G13180 | 32.374 | 278 | 162 | 9 | 1 | 269 | 1 | 261 | 2.59e-24 | 99.0 |
| MsG0380012280.01.T01 | AT2G47150 | 29.921 | 254 | 114 | 6 | 18 | 269 | 3 | 194 | 3.59e-24 | 97.1 |
| MsG0380012280.01.T01 | AT1G54870 | 28.623 | 276 | 175 | 6 | 2 | 268 | 68 | 330 | 5.43e-24 | 99.8 |
| MsG0380012280.01.T01 | AT1G54870 | 28.623 | 276 | 175 | 6 | 2 | 268 | 70 | 332 | 5.88e-24 | 99.4 |
| MsG0380012280.01.T01 | AT2G29360 | 32.103 | 271 | 165 | 8 | 12 | 277 | 12 | 268 | 6.64e-24 | 98.2 |
| MsG0380012280.01.T01 | AT2G29340 | 32.463 | 268 | 160 | 8 | 16 | 277 | 7 | 259 | 6.76e-24 | 97.8 |
| MsG0380012280.01.T01 | AT2G29340 | 32.463 | 268 | 160 | 8 | 16 | 277 | 7 | 259 | 1.01e-23 | 98.2 |
| MsG0380012280.01.T01 | AT3G05260 | 28.832 | 274 | 172 | 6 | 5 | 269 | 26 | 285 | 7.20e-23 | 95.5 |
| MsG0380012280.01.T01 | AT4G05530 | 33.333 | 270 | 140 | 10 | 14 | 269 | 7 | 250 | 2.99e-22 | 93.2 |
| MsG0380012280.01.T01 | AT5G18210 | 32.129 | 249 | 145 | 7 | 16 | 253 | 8 | 243 | 4.97e-22 | 93.2 |
| MsG0380012280.01.T01 | AT2G29330 | 32.836 | 268 | 159 | 8 | 16 | 277 | 7 | 259 | 5.98e-22 | 92.4 |
| MsG0380012280.01.T01 | AT2G29320 | 32.222 | 270 | 159 | 9 | 16 | 277 | 13 | 266 | 6.87e-22 | 92.8 |
| MsG0380012280.01.T01 | AT2G29350 | 31.250 | 272 | 161 | 8 | 16 | 279 | 15 | 268 | 1.65e-21 | 91.7 |
| MsG0380012280.01.T01 | AT3G04000 | 30.545 | 275 | 168 | 6 | 7 | 268 | 5 | 269 | 2.15e-21 | 91.3 |
| MsG0380012280.01.T01 | AT2G29150 | 30.943 | 265 | 167 | 8 | 16 | 277 | 16 | 267 | 3.59e-21 | 90.5 |
| MsG0380012280.01.T01 | AT3G55290 | 31.868 | 273 | 156 | 10 | 12 | 270 | 14 | 270 | 3.76e-21 | 90.9 |
| MsG0380012280.01.T01 | AT3G55290 | 31.868 | 273 | 156 | 10 | 12 | 270 | 13 | 269 | 3.93e-21 | 90.9 |
| MsG0380012280.01.T01 | AT3G03980 | 30.742 | 283 | 168 | 8 | 1 | 269 | 1 | 269 | 5.70e-21 | 90.1 |
| MsG0380012280.01.T01 | AT3G55310 | 29.964 | 277 | 156 | 9 | 12 | 270 | 13 | 269 | 1.82e-20 | 89.0 |
| MsG0380012280.01.T01 | AT2G29290 | 30.769 | 260 | 161 | 9 | 16 | 270 | 7 | 252 | 2.20e-20 | 88.6 |
| MsG0380012280.01.T01 | AT1G07450 | 30.712 | 267 | 165 | 9 | 16 | 277 | 8 | 259 | 3.29e-20 | 87.8 |
| MsG0380012280.01.T01 | AT2G29370 | 30.882 | 272 | 165 | 10 | 12 | 276 | 12 | 267 | 3.64e-20 | 87.8 |
| MsG0380012280.01.T01 | AT2G17845 | 30.566 | 265 | 161 | 9 | 16 | 268 | 47 | 300 | 4.01e-20 | 88.6 |
| MsG0380012280.01.T01 | AT2G29300 | 30.189 | 265 | 157 | 9 | 16 | 270 | 7 | 253 | 4.89e-20 | 87.4 |
| MsG0380012280.01.T01 | AT1G62610 | 28.782 | 271 | 168 | 8 | 12 | 270 | 10 | 267 | 6.17e-20 | 87.4 |
| MsG0380012280.01.T01 | AT1G62610 | 28.782 | 271 | 168 | 8 | 12 | 270 | 9 | 266 | 6.52e-20 | 87.4 |
| MsG0380012280.01.T01 | AT1G62610 | 28.782 | 271 | 168 | 8 | 12 | 270 | 15 | 272 | 7.00e-20 | 87.4 |
| MsG0380012280.01.T01 | AT1G62610 | 28.782 | 271 | 168 | 8 | 12 | 270 | 11 | 268 | 7.00e-20 | 87.4 |
| MsG0380012280.01.T01 | AT1G63380 | 28.413 | 271 | 169 | 8 | 12 | 270 | 11 | 268 | 9.57e-20 | 87.0 |
| MsG0380012280.01.T01 | AT1G63380 | 28.413 | 271 | 169 | 8 | 12 | 270 | 13 | 270 | 1.01e-19 | 87.0 |
| MsG0380012280.01.T01 | AT1G63380 | 28.413 | 271 | 169 | 8 | 12 | 270 | 15 | 272 | 1.05e-19 | 87.0 |
| MsG0380012280.01.T01 | AT2G29300 | 30.189 | 265 | 157 | 9 | 16 | 270 | 7 | 253 | 1.18e-19 | 86.7 |
| MsG0380012280.01.T01 | AT1G63380 | 28.413 | 271 | 169 | 8 | 12 | 270 | 18 | 275 | 1.26e-19 | 86.7 |
| MsG0380012280.01.T01 | AT1G07440 | 30.000 | 270 | 171 | 8 | 13 | 277 | 7 | 263 | 2.72e-19 | 85.5 |
| MsG0380012280.01.T01 | AT3G46170 | 29.851 | 268 | 168 | 7 | 12 | 270 | 22 | 278 | 3.35e-19 | 85.5 |
| MsG0380012280.01.T01 | AT2G29310 | 31.474 | 251 | 151 | 8 | 33 | 277 | 22 | 257 | 7.99e-19 | 84.0 |
| MsG0380012280.01.T01 | AT2G29260 | 29.630 | 270 | 169 | 5 | 7 | 270 | 59 | 313 | 1.62e-18 | 84.3 |
| MsG0380012280.01.T01 | AT5G65205 | 30.579 | 242 | 145 | 9 | 20 | 248 | 10 | 241 | 8.36e-18 | 81.6 |
| MsG0380012280.01.T01 | AT1G49670 | 34.615 | 208 | 113 | 7 | 18 | 208 | 6 | 207 | 1.18e-17 | 83.2 |
| MsG0380012280.01.T01 | AT1G49670 | 34.615 | 208 | 113 | 7 | 18 | 208 | 6 | 207 | 1.32e-17 | 83.2 |
| MsG0380012280.01.T01 | AT3G12800 | 30.403 | 273 | 155 | 10 | 18 | 273 | 12 | 266 | 2.52e-17 | 80.5 |
| MsG0380012280.01.T01 | AT2G29310 | 34.518 | 197 | 117 | 5 | 16 | 206 | 7 | 197 | 8.71e-17 | 77.4 |
| MsG0380012280.01.T01 | AT2G29340 | 33.503 | 197 | 119 | 5 | 16 | 206 | 7 | 197 | 1.00e-16 | 77.0 |
| MsG0380012280.01.T01 | AT2G29340 | 33.503 | 197 | 119 | 5 | 16 | 206 | 7 | 197 | 1.00e-16 | 77.0 |
| MsG0380012280.01.T01 | AT5G10050 | 27.500 | 240 | 155 | 7 | 20 | 248 | 9 | 240 | 1.06e-15 | 75.9 |
| MsG0380012280.01.T01 | AT2G29320 | 28.968 | 252 | 157 | 8 | 33 | 277 | 12 | 248 | 2.55e-15 | 74.3 |
| MsG0380012280.01.T01 | AT2G29350 | 32.487 | 197 | 117 | 7 | 18 | 206 | 17 | 205 | 7.63e-15 | 72.4 |
| MsG0380012280.01.T01 | AT2G29320 | 35.204 | 196 | 112 | 7 | 16 | 203 | 13 | 201 | 1.01e-14 | 71.6 |
| MsG0380012280.01.T01 | AT2G29350 | 29.675 | 246 | 147 | 8 | 42 | 279 | 3 | 230 | 1.39e-14 | 71.6 |
| MsG0380012280.01.T01 | AT3G01980 | 26.259 | 278 | 179 | 9 | 12 | 279 | 4 | 265 | 8.64e-14 | 70.1 |
| MsG0380012280.01.T01 | AT3G01980 | 26.259 | 278 | 179 | 9 | 12 | 279 | 4 | 265 | 8.64e-14 | 70.1 |
| MsG0380012280.01.T01 | AT1G10310 | 30.319 | 188 | 127 | 4 | 19 | 205 | 18 | 202 | 1.12e-13 | 69.3 |
| MsG0380012280.01.T01 | AT5G50690 | 32.778 | 180 | 109 | 5 | 13 | 186 | 42 | 215 | 3.41e-13 | 68.2 |
| MsG0380012280.01.T01 | AT5G50590 | 32.778 | 180 | 109 | 5 | 13 | 186 | 42 | 215 | 3.41e-13 | 68.2 |
| MsG0380012280.01.T01 | AT3G01980 | 27.948 | 229 | 149 | 7 | 57 | 279 | 23 | 241 | 1.96e-12 | 65.9 |
| MsG0380012280.01.T01 | AT5G50770 | 28.293 | 205 | 132 | 7 | 1 | 198 | 30 | 226 | 4.65e-11 | 62.8 |
Find 80 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAACAATGCCGGAATTTC+CGG | 0.202788 | 3:+14055316 | MsG0380012280.01.T01:CDS |
| TCTATCTCCCTCAGGTTATT+AGG | 0.276724 | 3:+14055052 | MsG0380012280.01.T01:intron |
| AAAGAATGTTGCAGCTGAAT+TGG | 0.300735 | 3:+14055558 | MsG0380012280.01.T01:CDS |
| AAGAATGTTGCAGCTGAATT+GGG | 0.332776 | 3:+14055559 | MsG0380012280.01.T01:CDS |
| AACGATGCTTTCTCCAATTC+CGG | 0.333693 | 3:-14055104 | None:intergenic |
| AAACCTGTTGCGACACAATA+AGG | 0.353421 | 3:-14055613 | None:intergenic |
| ATGTCCACATTGCGGATATC+AGG | 0.353991 | 3:-14055349 | None:intergenic |
| ACAAGGTGCTCCGGAAATTC+CGG | 0.362111 | 3:-14055326 | None:intergenic |
| GGTAAAGTCGCTGTGGTAAC+TGG | 0.398077 | 3:+14055073 | MsG0380012280.01.T01:CDS |
| ACTGGTGGAGCATCCGGAAT+TGG | 0.400185 | 3:+14055091 | MsG0380012280.01.T01:CDS |
| TGTCGCAACAGGTTTGGCTT+TGG | 0.407028 | 3:+14055621 | MsG0380012280.01.T01:CDS |
| TCACCTTATTGTGTCGCAAC+AGG | 0.411141 | 3:+14055610 | MsG0380012280.01.T01:CDS |
| CTTTGATTCCTTAAGTGATC+CGG | 0.413172 | 3:+14055195 | MsG0380012280.01.T01:CDS |
| AGCAGAAGTGGAAGCATTGA+TGG | 0.419475 | 3:-14052743 | None:intergenic |
| TTATTGTGTCGCAACAGGTT+TGG | 0.420837 | 3:+14055615 | MsG0380012280.01.T01:CDS |
| GATTGTTAATTTACTTAAGC+AGG | 0.425153 | 3:+14055884 | MsG0380012280.01.T01:three_prime_UTR |
| TTATTAATGTACCTTTGTGC+TGG | 0.426595 | 3:-14052766 | None:intergenic |
| GCAAGCTCCTTAGGAGGGTT+AGG | 0.430890 | 3:+14055490 | MsG0380012280.01.T01:CDS |
| TCCAAGGTCGTCTTGGACAT+CGG | 0.440509 | 3:-14055164 | None:intergenic |
| ACTTCATAGACAAGCTATAG+TGG | 0.444738 | 3:-14055961 | None:intergenic |
| GTGGTAACTGGTGGAGCATC+CGG | 0.445609 | 3:+14055085 | MsG0380012280.01.T01:CDS |
| TCCATCGCCTTCGCTAAATT+CGG | 0.449150 | 3:+14055277 | MsG0380012280.01.T01:CDS |
| TAGCACCATGGGTATGGAAT+AGG | 0.450060 | 3:-14055129 | None:intergenic |
| TCAAGTGTAGCAAGCTCCTT+AGG | 0.457194 | 3:+14055481 | MsG0380012280.01.T01:CDS |
| CCCGACAAAAGAACGAAAAC+CGG | 0.460507 | 3:-14055683 | None:intergenic |
| AGTATTGAACATAAATGTAA+AGG | 0.463762 | 3:+14055387 | MsG0380012280.01.T01:CDS |
| GGAGAGAATCTGATGGTTGA+TGG | 0.464560 | 3:+14055799 | MsG0380012280.01.T01:CDS |
| TCCTCAGTTCTCTCATCCTC+AGG | 0.465574 | 3:-14055652 | None:intergenic |
| GTATTGAACATAAATGTAAA+GGG | 0.471340 | 3:+14055388 | MsG0380012280.01.T01:CDS |
| TAATCCCCACACAGCATGCT+TGG | 0.473559 | 3:-14055533 | None:intergenic |
| GATGATGCAAAGTATATAAG+TGG | 0.480032 | 3:+14055778 | MsG0380012280.01.T01:CDS |
| GCTTCTGTCCAAGGTCGTCT+TGG | 0.493536 | 3:-14055171 | None:intergenic |
| AAACTTTAGCACCATGGGTA+TGG | 0.496130 | 3:-14055135 | None:intergenic |
| GAGCAGCATGTTTCATTCCA+TGG | 0.496219 | 3:-14055417 | None:intergenic |
| GACATCATGGTCAACAATGC+CGG | 0.499370 | 3:+14055307 | MsG0380012280.01.T01:CDS |
| CCATTGTGATGTCGCGGTAG+AGG | 0.514187 | 3:+14055234 | MsG0380012280.01.T01:CDS |
| GGCTTTGGCTCATTTGCCTG+AGG | 0.514401 | 3:+14055636 | MsG0380012280.01.T01:CDS |
| AAAAGAACGAAAACCGGCCA+TGG | 0.520265 | 3:-14055677 | None:intergenic |
| AGGTTCCAAGCATGCTGTGT+GGG | 0.524350 | 3:+14055528 | MsG0380012280.01.T01:CDS |
| GATATCAGGACAAGGTGCTC+CGG | 0.531705 | 3:-14055335 | None:intergenic |
| TATCTGATCCCAAAGAAAAG+TGG | 0.546549 | 3:+14055442 | MsG0380012280.01.T01:CDS |
| TGATATCCGCAATGTGGACA+TGG | 0.549030 | 3:+14055351 | MsG0380012280.01.T01:CDS |
| ATGTGGTCCTAACCCTCCTA+AGG | 0.551278 | 3:-14055497 | None:intergenic |
| ATTGTTAATTTACTTAAGCA+GGG | 0.551315 | 3:+14055885 | MsG0380012280.01.T01:three_prime_UTR |
| AATCAAAGAGCTTCTGTCCA+AGG | 0.553131 | 3:-14055180 | None:intergenic |
| ATTCGGCACTCTAGACATCA+TGG | 0.560079 | 3:+14055294 | MsG0380012280.01.T01:CDS |
| AGAACTGAGGATGCCATGGC+CGG | 0.563331 | 3:+14055664 | MsG0380012280.01.T01:CDS |
| AGTGTAGCAAGCTCCTTAGG+AGG | 0.569352 | 3:+14055484 | MsG0380012280.01.T01:CDS |
| CCTTTGTGCTGGAGCAGAAG+TGG | 0.571821 | 3:-14052755 | None:intergenic |
| AGAATGTTGCAGCTGAATTG+GGG | 0.576958 | 3:+14055560 | MsG0380012280.01.T01:CDS |
| GCCGATGTCCAAGACGACCT+TGG | 0.579145 | 3:+14055163 | MsG0380012280.01.T01:CDS |
| GCCGAATTTAGCGAAGGCGA+TGG | 0.583309 | 3:-14055278 | None:intergenic |
| ACTTTGCATCATCACTTGCA+AGG | 0.589403 | 3:-14055768 | None:intergenic |
| GCAGCTGAATTGGGGAATCA+CGG | 0.591429 | 3:+14055568 | MsG0380012280.01.T01:CDS |
| GTTCGCCTATTCCATACCCA+TGG | 0.598440 | 3:+14055124 | MsG0380012280.01.T01:CDS |
| TGAGAGAACTGAGGATGCCA+TGG | 0.598847 | 3:+14055660 | MsG0380012280.01.T01:CDS |
| TATACAAACTTTAGCACCAT+GGG | 0.600611 | 3:-14055140 | None:intergenic |
| GTGTAGCAAGCTCCTTAGGA+GGG | 0.600708 | 3:+14055485 | MsG0380012280.01.T01:CDS |
| AAAGTCGCTGTGGTAACTGG+TGG | 0.611046 | 3:+14055076 | MsG0380012280.01.T01:CDS |
| GGTTCCAAGCATGCTGTGTG+GGG | 0.621291 | 3:+14055529 | MsG0380012280.01.T01:CDS |
| ATCACTTGCAAGGAAGAGCA+CGG | 0.637744 | 3:-14055758 | None:intergenic |
| CCTCTACCGCGACATCACAA+TGG | 0.645195 | 3:-14055234 | None:intergenic |
| TATAAGTGGAGAGAATCTGA+TGG | 0.659662 | 3:+14055792 | MsG0380012280.01.T01:CDS |
| CTATACAAACTTTAGCACCA+TGG | 0.660195 | 3:-14055141 | None:intergenic |
| TTAGGACCACATGGATACAC+AGG | 0.660593 | 3:+14055508 | MsG0380012280.01.T01:CDS |
| TAGAGTGCCGAATTTAGCGA+AGG | 0.661229 | 3:-14055284 | None:intergenic |
| TTAGGAGGGTTAGGACCACA+TGG | 0.665372 | 3:+14055499 | MsG0380012280.01.T01:CDS |
| CAGGTTCCAAGCATGCTGTG+TGG | 0.666698 | 3:+14055527 | MsG0380012280.01.T01:CDS |
| CCACTTCTGCTCCAGCACAA+AGG | 0.668460 | 3:+14052755 | MsG0380012280.01.T01:CDS |
| GAGAATCTGATGGTTGATGG+AGG | 0.675115 | 3:+14055802 | MsG0380012280.01.T01:CDS |
| TTGTCCTGATATCCGCAATG+TGG | 0.677376 | 3:+14055345 | MsG0380012280.01.T01:CDS |
| ATTCCGCCATGTCCACATTG+CGG | 0.679257 | 3:-14055357 | None:intergenic |
| GTTATTAGGTAAAGTCGCTG+TGG | 0.686687 | 3:+14055066 | MsG0380012280.01.T01:CDS |
| AGAGTTAACTGCTGACGATG+TGG | 0.691358 | 3:+14055729 | MsG0380012280.01.T01:CDS |
| TTTCGTCCATTGTGATGTCG+CGG | 0.702507 | 3:+14055228 | MsG0380012280.01.T01:CDS |
| GAAGGCGATGGATACTGCAG+TGG | 0.703018 | 3:-14055266 | None:intergenic |
| TTGGAACCTGTGTATCCATG+TGG | 0.707353 | 3:-14055514 | None:intergenic |
| TATCCGCAATGTGGACATGG+CGG | 0.711517 | 3:+14055354 | MsG0380012280.01.T01:CDS |
| ACATTGCGGATATCAGGACA+AGG | 0.713879 | 3:-14055343 | None:intergenic |
| GCCTGAGGATGAGAGAACTG+AGG | 0.754801 | 3:+14055651 | MsG0380012280.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTAATTCTAACTAAAAA+TGG | - | Chr3:14053541-14053560 | None:intergenic | 15.0% |
| !! | AGATCTAAATTAATGTTTAT+TGG | + | Chr3:14053219-14053238 | MsG0380012280.01.T01:intron | 15.0% |
| !! | GATCTAAATTAATGTTTATT+GGG | + | Chr3:14053220-14053239 | MsG0380012280.01.T01:intron | 15.0% |
| !!! | ATGATAAATCTAAAATTCAT+AGG | - | Chr3:14053873-14053892 | None:intergenic | 15.0% |
| !! | AAAATGAGAATTTATAATGC+AGG | + | Chr3:14054361-14054380 | MsG0380012280.01.T01:intron | 20.0% |
| !! | AAGAAATTGAAGCTAATATT+TGG | + | Chr3:14054533-14054552 | MsG0380012280.01.T01:intron | 20.0% |
| !! | ATTGTTAATTTACTTAAGCA+GGG | + | Chr3:14055885-14055904 | MsG0380012280.01.T01:three_prime_UTR | 20.0% |
| !! | CAAAAAGGATAATTTAATGA+AGG | + | Chr3:14054662-14054681 | MsG0380012280.01.T01:intron | 20.0% |
| !! | GTATTGAACATAAATGTAAA+GGG | + | Chr3:14055388-14055407 | MsG0380012280.01.T01:CDS | 20.0% |
| !! | TATATACCAAAATATAGACA+TGG | - | Chr3:14053634-14053653 | None:intergenic | 20.0% |
| !! | TTGGCATGAAAAAAAAATTA+TGG | + | Chr3:14054291-14054310 | MsG0380012280.01.T01:intron | 20.0% |
| !!! | AGTATTGAACATAAATGTAA+AGG | + | Chr3:14055387-14055406 | MsG0380012280.01.T01:CDS | 20.0% |
| !!! | ATGAAGTTCTTTTTTTGTTT+TGG | - | Chr3:14053765-14053784 | None:intergenic | 20.0% |
| !!! | ATTCTTATCAAGACTTTTTT+TGG | + | Chr3:14052826-14052845 | MsG0380012280.01.T01:intron | 20.0% |
| !!! | TGATTATCTAGAATTGATTT+TGG | - | Chr3:14053567-14053586 | None:intergenic | 20.0% |
| !!! | TTAAACTTACTTTTACATGA+AGG | + | Chr3:14053501-14053520 | MsG0380012280.01.T01:intron | 20.0% |
| !!! | TTATGAAGGAATTTGAATTT+TGG | - | Chr3:14053903-14053922 | None:intergenic | 20.0% |
| ! | AAATTCCTTCATAATGAGAT+TGG | + | Chr3:14053909-14053928 | MsG0380012280.01.T01:intron | 25.0% |
| ! | AACATGTCAGAATCAATTAT+AGG | - | Chr3:14053368-14053387 | None:intergenic | 25.0% |
| ! | AATGAAGGTTGAATCAATTT+AGG | + | Chr3:14054677-14054696 | MsG0380012280.01.T01:intron | 25.0% |
| ! | AGTTATGTATTACTCAGATA+TGG | + | Chr3:14054562-14054581 | MsG0380012280.01.T01:intron | 25.0% |
| ! | GATTGTTAATTTACTTAAGC+AGG | + | Chr3:14055884-14055903 | MsG0380012280.01.T01:three_prime_UTR | 25.0% |
| ! | TAATTCAGAAATCAGTGATA+TGG | - | Chr3:14054881-14054900 | None:intergenic | 25.0% |
| ! | TATAACCAATCTCATTATGA+AGG | - | Chr3:14053917-14053936 | None:intergenic | 25.0% |
| ! | TCATAGGAATCACATTATTT+GGG | - | Chr3:14053857-14053876 | None:intergenic | 25.0% |
| ! | TTCATAGGAATCACATTATT+TGG | - | Chr3:14053858-14053877 | None:intergenic | 25.0% |
| ! | TTCTAACTAAAAATGGTTTG+TGG | - | Chr3:14053534-14053553 | None:intergenic | 25.0% |
| !! | AAGTAAGTAAATTCTAGCTA+AGG | - | Chr3:14054735-14054754 | None:intergenic | 25.0% |
| !! | AGCATGATGATTTTATATGT+TGG | - | Chr3:14054413-14054432 | None:intergenic | 25.0% |
| !! | GAGATTGGTTATATAATTTG+AGG | + | Chr3:14053924-14053943 | MsG0380012280.01.T01:intron | 25.0% |
| !! | TTTTGGACACTAGAAATTTA+CGG | + | Chr3:14053973-14053992 | MsG0380012280.01.T01:intron | 25.0% |
| !!! | ATTTGAATTCTTCAAGTTGT+TGG | + | Chr3:14053000-14053019 | MsG0380012280.01.T01:intron | 25.0% |
| !!! | TAATTTGCTACTAATATCTG+AGG | + | Chr3:14054601-14054620 | MsG0380012280.01.T01:intron | 25.0% |
| !!! | TATCACTGATTTCTGAATTA+TGG | + | Chr3:14054881-14054900 | MsG0380012280.01.T01:intron | 25.0% |
| !!! | TTTTCATTGAGAGTATGTTT+GGG | + | Chr3:14053263-14053282 | MsG0380012280.01.T01:intron | 25.0% |
| ATAGGAATCACATTATTTGG+GGG | - | Chr3:14053855-14053874 | None:intergenic | 30.0% | |
| ATTTCTTCAACCAAGAAGTA+GGG | + | Chr3:14054158-14054177 | MsG0380012280.01.T01:intron | 30.0% | |
| CATAGGAATCACATTATTTG+GGG | - | Chr3:14053856-14053875 | None:intergenic | 30.0% | |
| CTTTAGACCTACAAATATGT+TGG | - | Chr3:14054189-14054208 | None:intergenic | 30.0% | |
| GATGATGCAAAGTATATAAG+TGG | + | Chr3:14055778-14055797 | MsG0380012280.01.T01:CDS | 30.0% | |
| GATTTCTGAATTATGGATTC+TGG | + | Chr3:14054888-14054907 | MsG0380012280.01.T01:intron | 30.0% | |
| TATACAAACTTTAGCACCAT+GGG | - | Chr3:14055143-14055162 | None:intergenic | 30.0% | |
| TATTTCTTCAACCAAGAAGT+AGG | + | Chr3:14054157-14054176 | MsG0380012280.01.T01:intron | 30.0% | |
| TGAGAATTTATAATGCAGGT+AGG | + | Chr3:14054365-14054384 | MsG0380012280.01.T01:intron | 30.0% | |
| TTATTAATGTACCTTTGTGC+TGG | - | Chr3:14052769-14052788 | None:intergenic | 30.0% | |
| ! | GTTTAACTTCCATAGTAAGA+CGG | + | Chr3:14054107-14054126 | MsG0380012280.01.T01:intron | 30.0% |
| ! | TGGACGAAAAAAACATTTTC+CGG | - | Chr3:14055217-14055236 | None:intergenic | 30.0% |
| !! | ACTTACTTTTGACCAAATTC+AGG | + | Chr3:14054747-14054766 | MsG0380012280.01.T01:intron | 30.0% |
| !! | GTTTTCATTGAGAGTATGTT+TGG | + | Chr3:14053262-14053281 | MsG0380012280.01.T01:intron | 30.0% |
| !! | TCTTGTATTTTAGATGAGCT+TGG | + | Chr3:14054272-14054291 | MsG0380012280.01.T01:intron | 30.0% |
| !!! | ATTATTGAGCCACTTTTCTT+TGG | - | Chr3:14055454-14055473 | None:intergenic | 30.0% |
| !!! | TGAATTATGGATTCTGGTTT+TGG | + | Chr3:14054894-14054913 | MsG0380012280.01.T01:intron | 30.0% |
| !!! | TTATTGAGCCACTTTTCTTT+GGG | - | Chr3:14055453-14055472 | None:intergenic | 30.0% |
| AAAGAATGTTGCAGCTGAAT+TGG | + | Chr3:14055558-14055577 | MsG0380012280.01.T01:CDS | 35.0% | |
| AACAAATAAGAGATCTGCTG+AGG | + | Chr3:14052975-14052994 | MsG0380012280.01.T01:intron | 35.0% | |
| AAGAATGTTGCAGCTGAATT+GGG | + | Chr3:14055559-14055578 | MsG0380012280.01.T01:CDS | 35.0% | |
| AATGATTGAAACACTGAGAG+TGG | - | Chr3:14055012-14055031 | None:intergenic | 35.0% | |
| ACTTCATAGACAAGCTATAG+TGG | - | Chr3:14055964-14055983 | None:intergenic | 35.0% | |
| AGAAGGACTATGTGTATGTT+TGG | + | Chr3:14053296-14053315 | MsG0380012280.01.T01:intron | 35.0% | |
| AGCGAACCATAGTTTAAATC+CGG | + | Chr3:14054207-14054226 | MsG0380012280.01.T01:intron | 35.0% | |
| ATCAAAACATCCAGATCCTA+AGG | - | Chr3:14054335-14054354 | None:intergenic | 35.0% | |
| CATTGTGTCACAGATAAACA+TGG | - | Chr3:14054941-14054960 | None:intergenic | 35.0% | |
| CTATACAAACTTTAGCACCA+TGG | - | Chr3:14055144-14055163 | None:intergenic | 35.0% | |
| CTTTGATTCCTTAAGTGATC+CGG | + | Chr3:14055195-14055214 | MsG0380012280.01.T01:CDS | 35.0% | |
| GACCAAATTCAGGATTAACA+GGG | + | Chr3:14054757-14054776 | MsG0380012280.01.T01:intron | 35.0% | |
| GACCTACAAATATGTTGGAT+CGG | - | Chr3:14054184-14054203 | None:intergenic | 35.0% | |
| GACTTTACCTAATAACCTGA+GGG | - | Chr3:14055062-14055081 | None:intergenic | 35.0% | |
| GCTTCAACTAGAATCACTTA+TGG | - | Chr3:14053422-14053441 | None:intergenic | 35.0% | |
| GGATGTATCACGCAAATAAT+TGG | - | Chr3:14053347-14053366 | None:intergenic | 35.0% | |
| TATAAGTGGAGAGAATCTGA+TGG | + | Chr3:14055792-14055811 | MsG0380012280.01.T01:CDS | 35.0% | |
| TATCACGCAAATAATTGGTC+TGG | - | Chr3:14053342-14053361 | None:intergenic | 35.0% | |
| TATCTGATCCCAAAGAAAAG+TGG | + | Chr3:14055442-14055461 | MsG0380012280.01.T01:CDS | 35.0% | |
| TCAACTAGAATCACTTATGG+AGG | - | Chr3:14053419-14053438 | None:intergenic | 35.0% | |
| TGACCAAATTCAGGATTAAC+AGG | + | Chr3:14054756-14054775 | MsG0380012280.01.T01:intron | 35.0% | |
| TGTGTGTTTAGTTGTGAAGT+GGG | - | Chr3:14053611-14053630 | None:intergenic | 35.0% | |
| ! | AACATTTTCCGGATCACTTA+AGG | - | Chr3:14055206-14055225 | None:intergenic | 35.0% |
| ! | AAGTGATTCTAGTTGAAGCT+AGG | + | Chr3:14053423-14053442 | MsG0380012280.01.T01:intron | 35.0% |
| ! | AATGTAAAGGGAGTTTTCCA+TGG | + | Chr3:14055400-14055419 | MsG0380012280.01.T01:CDS | 35.0% |
| ! | CACACACCATGTCTATATTT+TGG | + | Chr3:14053625-14053644 | MsG0380012280.01.T01:intron | 35.0% |
| ! | GAGGGTTACAACAAAAGTAT+GGG | + | Chr3:14054800-14054819 | MsG0380012280.01.T01:intron | 35.0% |
| !! | TCTTCAAGTTGTTGGCTTTA+TGG | + | Chr3:14053008-14053027 | MsG0380012280.01.T01:intron | 35.0% |
| !!! | GATTTCTCAGGCATGTTTTT+TGG | + | Chr3:14053956-14053975 | MsG0380012280.01.T01:intron | 35.0% |
| !!! | TCCTTTTTGAACTTTGAGAC+CGG | - | Chr3:14054651-14054670 | None:intergenic | 35.0% |
| AAACATCCAGATCCTAAGGA+TGG | - | Chr3:14054331-14054350 | None:intergenic | 40.0% | |
| AAACCTGTTGCGACACAATA+AGG | - | Chr3:14055616-14055635 | None:intergenic | 40.0% | |
| AAACTTTAGCACCATGGGTA+TGG | - | Chr3:14055138-14055157 | None:intergenic | 40.0% | |
| AACGATGCTTTCTCCAATTC+CGG | - | Chr3:14055107-14055126 | None:intergenic | 40.0% | |
| AATCAAAGAGCTTCTGTCCA+AGG | - | Chr3:14055183-14055202 | None:intergenic | 40.0% | |
| ACCGGTCTCAAAGTTCAAAA+AGG | + | Chr3:14054647-14054666 | MsG0380012280.01.T01:intron | 40.0% | |
| ACTTTGCATCATCACTTGCA+AGG | - | Chr3:14055771-14055790 | None:intergenic | 40.0% | |
| AGAATGTTGCAGCTGAATTG+GGG | + | Chr3:14055560-14055579 | MsG0380012280.01.T01:CDS | 40.0% | |
| CCATAGTTTAAATCCGGTGT+AGG | + | Chr3:14054213-14054232 | MsG0380012280.01.T01:intron | 40.0% | |
| CCTACACCGGATTTAAACTA+TGG | - | Chr3:14054216-14054235 | None:intergenic | 40.0% | |
| CGACTTTACCTAATAACCTG+AGG | - | Chr3:14055063-14055082 | None:intergenic | 40.0% | |
| CTTATTAAACCAGCACAGCA+GGG | - | Chr3:14054025-14054044 | None:intergenic | 40.0% | |
| GACAAACTTAGTCAACACAC+AGG | - | Chr3:14052934-14052953 | None:intergenic | 40.0% | |
| GACCCTGTTAATCCTGAATT+TGG | - | Chr3:14054762-14054781 | None:intergenic | 40.0% | |
| GGAGGGTTACAACAAAAGTA+TGG | + | Chr3:14054799-14054818 | MsG0380012280.01.T01:intron | 40.0% | |
| GGTTGTGTCACAGATAAACA+TGG | - | Chr3:14054920-14054939 | None:intergenic | 40.0% | |
| GTGTGTGTTTAGTTGTGAAG+TGG | - | Chr3:14053612-14053631 | None:intergenic | 40.0% | |
| GTTATTAGGTAAAGTCGCTG+TGG | + | Chr3:14055066-14055085 | MsG0380012280.01.T01:CDS | 40.0% | |
| TCAACCTTCAAATCTTCCAC+CGG | + | Chr3:14054629-14054648 | MsG0380012280.01.T01:intron | 40.0% | |
| TCTATCTCCCTCAGGTTATT+AGG | + | Chr3:14055052-14055071 | MsG0380012280.01.T01:intron | 40.0% | |
| TCTGGTACTCAATGTAGAAG+TGG | - | Chr3:14053324-14053343 | None:intergenic | 40.0% | |
| TCTTATTAAACCAGCACAGC+AGG | - | Chr3:14054026-14054045 | None:intergenic | 40.0% | |
| TTATTGTGTCGCAACAGGTT+TGG | + | Chr3:14055615-14055634 | MsG0380012280.01.T01:CDS | 40.0% | |
| ! | TCATTGAGAGTATGTTTGGG+TGG | + | Chr3:14053266-14053285 | MsG0380012280.01.T01:intron | 40.0% |
| !! | AGGATTTCTGCTGATTTCTC+AGG | + | Chr3:14053944-14053963 | MsG0380012280.01.T01:intron | 40.0% |
| !!! | TTTTTGAACTTTGAGACCGG+TGG | - | Chr3:14054648-14054667 | None:intergenic | 40.0% |
| AAAAGAACGAAAACCGGCCA+TGG | - | Chr3:14055680-14055699 | None:intergenic | 45.0% | |
| ACATTGCGGATATCAGGACA+AGG | - | Chr3:14055346-14055365 | None:intergenic | 45.0% | |
| AGAGTTAACTGCTGACGATG+TGG | + | Chr3:14055729-14055748 | MsG0380012280.01.T01:CDS | 45.0% | |
| ATCACTTGCAAGGAAGAGCA+CGG | - | Chr3:14055761-14055780 | None:intergenic | 45.0% | |
| ATGAGAGAGCCAAGTACACA+AGG | - | Chr3:14053829-14053848 | None:intergenic | 45.0% | |
| ATGTCCACATTGCGGATATC+AGG | - | Chr3:14055352-14055371 | None:intergenic | 45.0% | |
| ATTCGGCACTCTAGACATCA+TGG | + | Chr3:14055294-14055313 | MsG0380012280.01.T01:CDS | 45.0% | |
| CAAGTACACAAGGCTAAGGT+TGG | - | Chr3:14053819-14053838 | None:intergenic | 45.0% | |
| CCCGACAAAAGAACGAAAAC+CGG | - | Chr3:14055686-14055705 | None:intergenic | 45.0% | |
| GACATCATGGTCAACAATGC+CGG | + | Chr3:14055307-14055326 | MsG0380012280.01.T01:CDS | 45.0% | |
| GAGCAGCATGTTTCATTCCA+TGG | - | Chr3:14055420-14055439 | None:intergenic | 45.0% | |
| GATTCTTCGCCGTCTTACTA+TGG | - | Chr3:14054119-14054138 | None:intergenic | 45.0% | |
| GGAGAGAATCTGATGGTTGA+TGG | + | Chr3:14055799-14055818 | MsG0380012280.01.T01:CDS | 45.0% | |
| GGCCGATCCAACATATTTGT+AGG | + | Chr3:14054179-14054198 | MsG0380012280.01.T01:intron | 45.0% | |
| GGGAAAAACGCAAACTTGCA+GGG | + | Chr3:14055703-14055722 | MsG0380012280.01.T01:CDS | 45.0% | |
| GTCAACAATGCCGGAATTTC+CGG | + | Chr3:14055316-14055335 | MsG0380012280.01.T01:CDS | 45.0% | |
| GTTTGGGTGGAAGGTTTAGA+AGG | + | Chr3:14053279-14053298 | MsG0380012280.01.T01:intron | 45.0% | |
| TAGCACCATGGGTATGGAAT+AGG | - | Chr3:14055132-14055151 | None:intergenic | 45.0% | |
| TCAAGTGTAGCAAGCTCCTT+AGG | + | Chr3:14055481-14055500 | MsG0380012280.01.T01:CDS | 45.0% | |
| TCACCTTATTGTGTCGCAAC+AGG | + | Chr3:14055610-14055629 | MsG0380012280.01.T01:CDS | 45.0% | |
| TCCATCGCCTTCGCTAAATT+CGG | + | Chr3:14055277-14055296 | MsG0380012280.01.T01:CDS | 45.0% | |
| TGATATCCGCAATGTGGACA+TGG | + | Chr3:14055351-14055370 | MsG0380012280.01.T01:CDS | 45.0% | |
| TTAGGACCACATGGATACAC+AGG | + | Chr3:14055508-14055527 | MsG0380012280.01.T01:CDS | 45.0% | |
| TTATGCTACCAGCCATCCTT+AGG | + | Chr3:14054316-14054335 | MsG0380012280.01.T01:intron | 45.0% | |
| TTGGAACCTGTGTATCCATG+TGG | - | Chr3:14055517-14055536 | None:intergenic | 45.0% | |
| TTGTCCTGATATCCGCAATG+TGG | + | Chr3:14055345-14055364 | MsG0380012280.01.T01:CDS | 45.0% | |
| TTTCGTCCATTGTGATGTCG+CGG | + | Chr3:14055228-14055247 | MsG0380012280.01.T01:CDS | 45.0% | |
| ! | CCGGTTTTCGTTCTTTTGTC+GGG | + | Chr3:14055683-14055702 | MsG0380012280.01.T01:CDS | 45.0% |
| ! | TGAGAGTATGTTTGGGTGGA+AGG | + | Chr3:14053270-14053289 | MsG0380012280.01.T01:intron | 45.0% |
| !! | AGCAGAAGTGGAAGCATTGA+TGG | - | Chr3:14052746-14052765 | None:intergenic | 45.0% |
| !! | CAACCTTAGCCTTGTGTACT+TGG | + | Chr3:14053817-14053836 | MsG0380012280.01.T01:intron | 45.0% |
| !! | GAGAATCTGATGGTTGATGG+AGG | + | Chr3:14055802-14055821 | MsG0380012280.01.T01:CDS | 45.0% |
| !! | GCCGGTTTTCGTTCTTTTGT+CGG | + | Chr3:14055682-14055701 | MsG0380012280.01.T01:CDS | 45.0% |
| !! | TAGAGTGCCGAATTTAGCGA+AGG | - | Chr3:14055287-14055306 | None:intergenic | 45.0% |
| AAAGTCGCTGTGGTAACTGG+TGG | + | Chr3:14055076-14055095 | MsG0380012280.01.T01:CDS | 50.0% | |
| AATCCGGTGTAGGACTTTCG+CGG | + | Chr3:14054223-14054242 | MsG0380012280.01.T01:intron | 50.0% | |
| AGGTTCCAAGCATGCTGTGT+GGG | + | Chr3:14055528-14055547 | MsG0380012280.01.T01:CDS | 50.0% | |
| AGTGTAGCAAGCTCCTTAGG+AGG | + | Chr3:14055484-14055503 | MsG0380012280.01.T01:CDS | 50.0% | |
| ATCCAGATCCTAAGGATGGC+TGG | - | Chr3:14054327-14054346 | None:intergenic | 50.0% | |
| ATGTGGTCCTAACCCTCCTA+AGG | - | Chr3:14055500-14055519 | None:intergenic | 50.0% | |
| ATTCCGCCATGTCCACATTG+CGG | - | Chr3:14055360-14055379 | None:intergenic | 50.0% | |
| CGGGAAAAACGCAAACTTGC+AGG | + | Chr3:14055702-14055721 | MsG0380012280.01.T01:CDS | 50.0% | |
| CTCTGCTATCTATCTCCCTC+AGG | + | Chr3:14055044-14055063 | MsG0380012280.01.T01:intron | 50.0% | |
| GAGACCGGTGGAAGATTTGA+AGG | - | Chr3:14054636-14054655 | None:intergenic | 50.0% | |
| GAGCCAAGTACACAAGGCTA+AGG | - | Chr3:14053823-14053842 | None:intergenic | 50.0% | |
| GCAGCTGAATTGGGGAATCA+CGG | + | Chr3:14055568-14055587 | MsG0380012280.01.T01:CDS | 50.0% | |
| GGTAAAGTCGCTGTGGTAAC+TGG | + | Chr3:14055073-14055092 | MsG0380012280.01.T01:CDS | 50.0% | |
| GTGTAGCAAGCTCCTTAGGA+GGG | + | Chr3:14055485-14055504 | MsG0380012280.01.T01:CDS | 50.0% | |
| GTTCGCCTATTCCATACCCA+TGG | + | Chr3:14055124-14055143 | MsG0380012280.01.T01:CDS | 50.0% | |
| TAACAGGGTCCCTTTCCCAT+CGG | + | Chr3:14054772-14054791 | MsG0380012280.01.T01:intron | 50.0% | |
| TAATCCCCACACAGCATGCT+TGG | - | Chr3:14055536-14055555 | None:intergenic | 50.0% | |
| TACCAGCCATCCTTAGGATC+TGG | + | Chr3:14054322-14054341 | MsG0380012280.01.T01:intron | 50.0% | |
| TATCCGCAATGTGGACATGG+CGG | + | Chr3:14055354-14055373 | MsG0380012280.01.T01:CDS | 50.0% | |
| TCCAAGGTCGTCTTGGACAT+CGG | - | Chr3:14055167-14055186 | None:intergenic | 50.0% | |
| TCCTCAGTTCTCTCATCCTC+AGG | - | Chr3:14055655-14055674 | None:intergenic | 50.0% | |
| TGAGAGAACTGAGGATGCCA+TGG | + | Chr3:14055660-14055679 | MsG0380012280.01.T01:CDS | 50.0% | |
| TGTAACCCTCCGATTCCGAT+GGG | - | Chr3:14054790-14054809 | None:intergenic | 50.0% | |
| TTAGGAGGGTTAGGACCACA+TGG | + | Chr3:14055499-14055518 | MsG0380012280.01.T01:CDS | 50.0% | |
| TTGTAACCCTCCGATTCCGA+TGG | - | Chr3:14054791-14054810 | None:intergenic | 50.0% | |
| ! | ACAAGGTGCTCCGGAAATTC+CGG | - | Chr3:14055329-14055348 | None:intergenic | 50.0% |
| ! | GATATCAGGACAAGGTGCTC+CGG | - | Chr3:14055338-14055357 | None:intergenic | 50.0% |
| ! | TGTCGCAACAGGTTTGGCTT+TGG | + | Chr3:14055621-14055640 | MsG0380012280.01.T01:CDS | 50.0% |
| !!! | AGTTTTTTGCCCTGCTGTGC+TGG | + | Chr3:14054013-14054032 | MsG0380012280.01.T01:intron | 50.0% |
| AGAACTGAGGATGCCATGGC+CGG | + | Chr3:14055664-14055683 | MsG0380012280.01.T01:CDS | 55.0% | |
| CAGGTTCCAAGCATGCTGTG+TGG | + | Chr3:14055527-14055546 | MsG0380012280.01.T01:CDS | 55.0% | |
| CCACTTCTGCTCCAGCACAA+AGG | + | Chr3:14052755-14052774 | MsG0380012280.01.T01:CDS | 55.0% | |
| CCATTGTGATGTCGCGGTAG+AGG | + | Chr3:14055234-14055253 | MsG0380012280.01.T01:CDS | 55.0% | |
| CCTCCGATTCCGATGGGAAA+GGG | - | Chr3:14054784-14054803 | None:intergenic | 55.0% | |
| CCTCTACCGCGACATCACAA+TGG | - | Chr3:14055237-14055256 | None:intergenic | 55.0% | |
| CCTTTCCCATCGGAATCGGA+GGG | + | Chr3:14054782-14054801 | MsG0380012280.01.T01:intron | 55.0% | |
| CCTTTGTGCTGGAGCAGAAG+TGG | - | Chr3:14052758-14052777 | None:intergenic | 55.0% | |
| GAAGGCGATGGATACTGCAG+TGG | - | Chr3:14055269-14055288 | None:intergenic | 55.0% | |
| GCAAGCTCCTTAGGAGGGTT+AGG | + | Chr3:14055490-14055509 | MsG0380012280.01.T01:CDS | 55.0% | |
| GCCGAATTTAGCGAAGGCGA+TGG | - | Chr3:14055281-14055300 | None:intergenic | 55.0% | |
| GCCTGAGGATGAGAGAACTG+AGG | + | Chr3:14055651-14055670 | MsG0380012280.01.T01:CDS | 55.0% | |
| GCTTCTGTCCAAGGTCGTCT+TGG | - | Chr3:14055174-14055193 | None:intergenic | 55.0% | |
| GGTCCCTTTCCCATCGGAAT+CGG | + | Chr3:14054778-14054797 | MsG0380012280.01.T01:intron | 55.0% | |
| GGTTCCAAGCATGCTGTGTG+GGG | + | Chr3:14055529-14055548 | MsG0380012280.01.T01:CDS | 55.0% | |
| GTTGGATCGGCCCTACTTCT+TGG | - | Chr3:14054171-14054190 | None:intergenic | 55.0% | |
| ! | ACTGGTGGAGCATCCGGAAT+TGG | + | Chr3:14055091-14055110 | MsG0380012280.01.T01:CDS | 55.0% |
| ! | GGCTTTGGCTCATTTGCCTG+AGG | + | Chr3:14055636-14055655 | MsG0380012280.01.T01:CDS | 55.0% |
| ! | GTGGTAACTGGTGGAGCATC+CGG | + | Chr3:14055085-14055104 | MsG0380012280.01.T01:CDS | 55.0% |
| CCCTCCGATTCCGATGGGAA+AGG | - | Chr3:14054785-14054804 | None:intergenic | 60.0% | |
| CCCTTTCCCATCGGAATCGG+AGG | + | Chr3:14054781-14054800 | MsG0380012280.01.T01:intron | 60.0% | |
| GCACCGCGAAAGTCCTACAC+CGG | - | Chr3:14054229-14054248 | None:intergenic | 60.0% | |
| GCCGATGTCCAAGACGACCT+TGG | + | Chr3:14055163-14055182 | MsG0380012280.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 14052679 | 14056011 | 14052679 | ID=MsG0380012280.01;Name=MsG0380012280.01 |
| Chr3 | mRNA | 14052679 | 14056011 | 14052679 | ID=MsG0380012280.01.T01;Parent=MsG0380012280.01;Name=MsG0380012280.01.T01;_AED=0.37;_eAED=0.37;_QI=54|1|1|1|1|1|2|147|280 |
| Chr3 | exon | 14052679 | 14052776 | 14052679 | ID=MsG0380012280.01.T01:exon:635;Parent=MsG0380012280.01.T01 |
| Chr3 | exon | 14055066 | 14056011 | 14055066 | ID=MsG0380012280.01.T01:exon:636;Parent=MsG0380012280.01.T01 |
| Chr3 | five_prime_UTR | 14052679 | 14052732 | 14052679 | ID=MsG0380012280.01.T01:five_prime_utr;Parent=MsG0380012280.01.T01 |
| Chr3 | CDS | 14052733 | 14052776 | 14052733 | ID=MsG0380012280.01.T01:cds;Parent=MsG0380012280.01.T01 |
| Chr3 | CDS | 14055066 | 14055864 | 14055066 | ID=MsG0380012280.01.T01:cds;Parent=MsG0380012280.01.T01 |
| Chr3 | three_prime_UTR | 14055865 | 14056011 | 14055865 | ID=MsG0380012280.01.T01:three_prime_utr;Parent=MsG0380012280.01.T01 |
| Gene Sequence |
| Protein sequence |
