Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021903.01.T01 | XP_003607490.2 | 98.596 | 285 | 4 | 0 | 1 | 285 | 1 | 285 | 0 | 578 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021903.01.T01 | Q9M1K9 | 58.889 | 270 | 108 | 3 | 15 | 282 | 4 | 272 | 1.62E-105 | 310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021903.01.T01 | G7JTV8 | 98.596 | 285 | 4 | 0 | 1 | 285 | 1 | 285 | 0.0 | 578 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480021903.01 | MsG0680032061.01 | PPI |
| MsG0480021903.01 | MsG0780039355.01 | PPI |
| MsG0480021903.01 | MsG0780041253.01 | PPI |
| MsG0480021903.01 | MsG0380012280.01 | PPI |
| MsG0480021903.01 | MsG0780041397.01 | PPI |
| MsG0480021903.01 | MsG0780040060.01 | PPI |
| MsG0480021903.01 | MsG0180003727.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021903.01.T01 | MTR_4g078630 | 98.596 | 285 | 4 | 0 | 1 | 285 | 1 | 285 | 0.0 | 578 |
| MsG0480021903.01.T01 | MTR_7g071680 | 46.786 | 280 | 132 | 6 | 15 | 279 | 25 | 302 | 1.05e-77 | 238 |
| MsG0480021903.01.T01 | MTR_4g052340 | 47.955 | 269 | 126 | 4 | 17 | 282 | 12 | 269 | 1.07e-74 | 229 |
| MsG0480021903.01.T01 | MTR_4g052350 | 46.886 | 273 | 127 | 4 | 15 | 282 | 10 | 269 | 1.14e-71 | 222 |
| MsG0480021903.01.T01 | MTR_4g052300 | 46.768 | 263 | 122 | 4 | 18 | 275 | 7 | 256 | 2.40e-70 | 218 |
| MsG0480021903.01.T01 | MTR_7g107670 | 45.946 | 259 | 133 | 5 | 17 | 272 | 31 | 285 | 3.43e-70 | 219 |
| MsG0480021903.01.T01 | MTR_4g052320 | 45.977 | 261 | 128 | 3 | 18 | 275 | 7 | 257 | 9.69e-69 | 214 |
| MsG0480021903.01.T01 | MTR_7g083870 | 45.588 | 272 | 137 | 7 | 17 | 284 | 33 | 297 | 2.14e-67 | 212 |
| MsG0480021903.01.T01 | MTR_7g110130 | 44.776 | 268 | 136 | 4 | 14 | 277 | 1 | 260 | 3.81e-66 | 207 |
| MsG0480021903.01.T01 | MTR_3g020670 | 45.091 | 275 | 144 | 4 | 5 | 274 | 1 | 273 | 8.52e-65 | 204 |
| MsG0480021903.01.T01 | MTR_6g023590 | 45.136 | 257 | 130 | 4 | 18 | 270 | 12 | 261 | 1.10e-64 | 204 |
| MsG0480021903.01.T01 | MTR_6g023990 | 45.076 | 264 | 134 | 4 | 11 | 270 | 6 | 262 | 7.52e-64 | 202 |
| MsG0480021903.01.T01 | MTR_6g023610 | 45.490 | 255 | 128 | 4 | 18 | 268 | 12 | 259 | 1.56e-63 | 201 |
| MsG0480021903.01.T01 | MTR_7g110160 | 46.241 | 266 | 110 | 5 | 14 | 274 | 1 | 238 | 1.70e-62 | 197 |
| MsG0480021903.01.T01 | MTR_2g090165 | 42.435 | 271 | 143 | 5 | 14 | 280 | 1 | 262 | 3.05e-62 | 197 |
| MsG0480021903.01.T01 | MTR_6g023910 | 42.857 | 266 | 141 | 3 | 18 | 279 | 12 | 270 | 6.79e-62 | 197 |
| MsG0480021903.01.T01 | MTR_7g105460 | 45.018 | 271 | 135 | 5 | 18 | 283 | 12 | 273 | 1.96e-61 | 196 |
| MsG0480021903.01.T01 | MTR_6g023600 | 44.922 | 256 | 130 | 4 | 18 | 269 | 12 | 260 | 4.77e-61 | 194 |
| MsG0480021903.01.T01 | MTR_7g110140 | 45.525 | 257 | 129 | 4 | 18 | 271 | 5 | 253 | 5.43e-61 | 194 |
| MsG0480021903.01.T01 | MTR_6g023950 | 46.484 | 256 | 126 | 5 | 18 | 269 | 12 | 260 | 1.71e-60 | 193 |
| MsG0480021903.01.T01 | MTR_6g023600 | 44.141 | 256 | 126 | 5 | 18 | 269 | 12 | 254 | 3.46e-57 | 184 |
| MsG0480021903.01.T01 | MTR_7g105580 | 40.613 | 261 | 126 | 6 | 17 | 274 | 6 | 240 | 5.43e-56 | 181 |
| MsG0480021903.01.T01 | MTR_7g105590 | 48.168 | 191 | 95 | 2 | 17 | 204 | 6 | 195 | 8.41e-55 | 176 |
| MsG0480021903.01.T01 | MTR_6g035395 | 41.538 | 260 | 134 | 5 | 17 | 276 | 3 | 244 | 2.84e-53 | 174 |
| MsG0480021903.01.T01 | MTR_3g113870 | 42.714 | 199 | 108 | 4 | 32 | 227 | 34 | 229 | 2.67e-47 | 158 |
| MsG0480021903.01.T01 | MTR_7g105570 | 44.554 | 202 | 101 | 4 | 84 | 283 | 38 | 230 | 8.35e-39 | 136 |
| MsG0480021903.01.T01 | MTR_4g084800 | 49.242 | 132 | 64 | 1 | 17 | 145 | 11 | 142 | 8.50e-36 | 125 |
| MsG0480021903.01.T01 | MTR_7g113650 | 29.811 | 265 | 158 | 7 | 18 | 269 | 39 | 288 | 5.50e-24 | 99.0 |
| MsG0480021903.01.T01 | MTR_1g082760 | 30.189 | 265 | 157 | 6 | 18 | 269 | 39 | 288 | 8.03e-24 | 98.6 |
| MsG0480021903.01.T01 | MTR_4g132850 | 30.682 | 264 | 159 | 7 | 16 | 272 | 4 | 250 | 1.19e-23 | 97.1 |
| MsG0480021903.01.T01 | MTR_3g085740 | 30.000 | 270 | 163 | 9 | 10 | 270 | 66 | 318 | 4.35e-21 | 91.3 |
| MsG0480021903.01.T01 | MTR_3g068155 | 28.958 | 259 | 165 | 8 | 19 | 271 | 19 | 264 | 9.17e-21 | 89.7 |
| MsG0480021903.01.T01 | MTR_7g094510 | 30.385 | 260 | 160 | 6 | 19 | 269 | 6 | 253 | 9.34e-21 | 89.4 |
| MsG0480021903.01.T01 | MTR_3g068070 | 29.167 | 264 | 158 | 9 | 19 | 271 | 15 | 260 | 1.44e-20 | 89.0 |
| MsG0480021903.01.T01 | MTR_4g131740 | 27.113 | 284 | 177 | 8 | 1 | 270 | 23 | 290 | 4.97e-20 | 88.2 |
| MsG0480021903.01.T01 | MTR_3g068065 | 30.000 | 260 | 163 | 9 | 19 | 272 | 17 | 263 | 9.09e-20 | 87.0 |
| MsG0480021903.01.T01 | MTR_3g068085 | 30.943 | 265 | 152 | 12 | 19 | 271 | 15 | 260 | 3.13e-19 | 85.5 |
| MsG0480021903.01.T01 | MTR_1196s0010 | 30.800 | 250 | 157 | 5 | 22 | 269 | 277 | 512 | 3.67e-19 | 87.4 |
| MsG0480021903.01.T01 | MTR_7g094520 | 29.008 | 262 | 163 | 7 | 19 | 270 | 11 | 259 | 4.12e-18 | 82.0 |
| MsG0480021903.01.T01 | MTR_7g063360 | 29.008 | 262 | 165 | 7 | 19 | 271 | 16 | 265 | 1.17e-17 | 80.9 |
| MsG0480021903.01.T01 | MTR_4g064887 | 28.044 | 271 | 152 | 11 | 19 | 271 | 15 | 260 | 9.77e-17 | 78.6 |
| MsG0480021903.01.T01 | MTR_1g051165 | 27.208 | 283 | 170 | 7 | 10 | 271 | 4 | 271 | 1.94e-16 | 77.8 |
| MsG0480021903.01.T01 | MTR_4g058810 | 28.676 | 272 | 173 | 7 | 11 | 271 | 2 | 263 | 3.51e-15 | 74.3 |
| MsG0480021903.01.T01 | MTR_4g058840 | 28.897 | 263 | 167 | 6 | 19 | 271 | 11 | 263 | 4.32e-15 | 73.9 |
| MsG0480021903.01.T01 | MTR_4g058820 | 28.897 | 263 | 167 | 6 | 19 | 271 | 11 | 263 | 4.32e-15 | 73.9 |
| MsG0480021903.01.T01 | MTR_7g063390 | 27.757 | 263 | 167 | 7 | 19 | 271 | 16 | 265 | 1.71e-14 | 72.0 |
| MsG0480021903.01.T01 | MTR_7g063260 | 27.547 | 265 | 167 | 5 | 19 | 272 | 16 | 266 | 3.42e-14 | 71.2 |
| MsG0480021903.01.T01 | MTR_8g096580 | 29.592 | 196 | 129 | 3 | 22 | 211 | 48 | 240 | 6.03e-14 | 71.2 |
| MsG0480021903.01.T01 | MTR_3g068175 | 27.206 | 272 | 179 | 8 | 6 | 271 | 4 | 262 | 1.75e-13 | 69.3 |
| MsG0480021903.01.T01 | MTR_7g063320 | 26.336 | 262 | 170 | 6 | 19 | 270 | 15 | 263 | 2.15e-13 | 68.9 |
| MsG0480021903.01.T01 | MTR_8g442750 | 29.021 | 286 | 162 | 11 | 5 | 270 | 1 | 265 | 2.50e-13 | 69.3 |
| MsG0480021903.01.T01 | MTR_4g086400 | 28.922 | 204 | 127 | 4 | 21 | 208 | 6 | 207 | 9.36e-13 | 68.6 |
| MsG0480021903.01.T01 | MTR_4g097510 | 31.771 | 192 | 115 | 6 | 22 | 205 | 5 | 188 | 1.13e-12 | 67.0 |
| MsG0480021903.01.T01 | MTR_1g068955 | 28.358 | 268 | 168 | 7 | 12 | 268 | 7 | 261 | 1.89e-12 | 66.6 |
| MsG0480021903.01.T01 | MTR_8g096620 | 27.638 | 199 | 128 | 5 | 16 | 205 | 42 | 233 | 3.55e-12 | 66.2 |
| MsG0480021903.01.T01 | MTR_7g063330 | 26.616 | 263 | 171 | 7 | 19 | 272 | 15 | 264 | 5.15e-12 | 65.1 |
| MsG0480021903.01.T01 | MTR_3g068175 | 26.449 | 276 | 180 | 9 | 6 | 271 | 4 | 266 | 9.56e-12 | 64.3 |
| MsG0480021903.01.T01 | MTR_7g063270 | 26.792 | 265 | 168 | 7 | 19 | 272 | 16 | 265 | 1.37e-11 | 63.9 |
| MsG0480021903.01.T01 | MTR_8g044240 | 26.531 | 196 | 129 | 4 | 25 | 207 | 75 | 268 | 3.52e-11 | 63.2 |
| MsG0480021903.01.T01 | MTR_7g076660 | 30.000 | 160 | 97 | 6 | 22 | 166 | 8 | 167 | 3.53e-11 | 62.8 |
| MsG0480021903.01.T01 | MTR_7g080410 | 28.774 | 212 | 126 | 8 | 22 | 212 | 41 | 248 | 4.05e-11 | 62.8 |
| MsG0480021903.01.T01 | MTR_4g086410 | 28.000 | 200 | 128 | 3 | 21 | 205 | 6 | 204 | 4.54e-11 | 63.5 |
| MsG0480021903.01.T01 | MTR_7g080410 | 29.245 | 212 | 125 | 8 | 22 | 212 | 41 | 248 | 4.85e-11 | 62.4 |
| MsG0480021903.01.T01 | MTR_7g076660 | 30.435 | 161 | 95 | 7 | 22 | 166 | 7 | 166 | 7.18e-11 | 62.0 |
| MsG0480021903.01.T01 | MTR_7g076655 | 31.447 | 159 | 92 | 7 | 24 | 166 | 9 | 166 | 9.81e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021903.01.T01 | AT3G42960 | 58.889 | 270 | 108 | 3 | 15 | 282 | 4 | 272 | 1.65e-106 | 310 |
| MsG0480021903.01.T01 | AT3G51680 | 46.520 | 273 | 135 | 3 | 14 | 275 | 27 | 299 | 2.23e-72 | 225 |
| MsG0480021903.01.T01 | AT3G26770 | 45.977 | 261 | 131 | 7 | 17 | 272 | 39 | 294 | 2.96e-67 | 212 |
| MsG0480021903.01.T01 | AT2G47140 | 45.946 | 259 | 129 | 4 | 14 | 269 | 1 | 251 | 1.31e-66 | 208 |
| MsG0480021903.01.T01 | AT3G26760 | 42.803 | 264 | 145 | 5 | 17 | 276 | 34 | 295 | 2.20e-63 | 202 |
| MsG0480021903.01.T01 | AT4G03140 | 42.966 | 263 | 143 | 5 | 17 | 276 | 76 | 334 | 6.83e-63 | 202 |
| MsG0480021903.01.T01 | AT2G47120 | 41.634 | 257 | 137 | 5 | 18 | 271 | 6 | 252 | 4.00e-58 | 187 |
| MsG0480021903.01.T01 | AT2G47120 | 41.634 | 257 | 137 | 5 | 18 | 271 | 5 | 251 | 4.33e-58 | 187 |
| MsG0480021903.01.T01 | AT3G29250 | 42.692 | 260 | 132 | 6 | 18 | 271 | 5 | 253 | 1.62e-57 | 185 |
| MsG0480021903.01.T01 | AT3G29250 | 41.573 | 267 | 139 | 6 | 11 | 271 | 34 | 289 | 4.29e-57 | 185 |
| MsG0480021903.01.T01 | AT3G29260 | 42.045 | 264 | 135 | 6 | 14 | 271 | 1 | 252 | 4.95e-57 | 184 |
| MsG0480021903.01.T01 | AT2G47130 | 40.467 | 257 | 141 | 3 | 18 | 271 | 5 | 252 | 3.02e-56 | 182 |
| MsG0480021903.01.T01 | AT3G29250 | 42.471 | 259 | 132 | 6 | 19 | 271 | 44 | 291 | 4.55e-56 | 183 |
| MsG0480021903.01.T01 | AT1G52340 | 42.264 | 265 | 144 | 3 | 17 | 274 | 16 | 278 | 1.60e-55 | 181 |
| MsG0480021903.01.T01 | AT2G47150 | 28.800 | 250 | 120 | 5 | 21 | 270 | 3 | 194 | 2.31e-23 | 95.1 |
| MsG0480021903.01.T01 | AT2G29310 | 27.857 | 280 | 159 | 8 | 19 | 282 | 7 | 259 | 4.41e-22 | 93.2 |
| MsG0480021903.01.T01 | AT1G54870 | 28.679 | 265 | 161 | 6 | 18 | 269 | 81 | 330 | 9.18e-22 | 93.6 |
| MsG0480021903.01.T01 | AT1G54870 | 28.679 | 265 | 161 | 6 | 18 | 269 | 83 | 332 | 1.02e-21 | 93.6 |
| MsG0480021903.01.T01 | AT3G03980 | 30.037 | 273 | 157 | 8 | 16 | 269 | 11 | 268 | 2.36e-21 | 91.3 |
| MsG0480021903.01.T01 | AT4G05530 | 30.827 | 266 | 156 | 9 | 16 | 272 | 6 | 252 | 1.05e-20 | 89.4 |
| MsG0480021903.01.T01 | AT5G06060 | 28.958 | 259 | 165 | 7 | 19 | 271 | 9 | 254 | 1.75e-20 | 89.0 |
| MsG0480021903.01.T01 | AT5G18210 | 30.943 | 265 | 153 | 8 | 19 | 268 | 8 | 257 | 2.33e-20 | 88.6 |
| MsG0480021903.01.T01 | AT3G04000 | 28.676 | 272 | 163 | 7 | 16 | 269 | 11 | 269 | 2.49e-20 | 88.6 |
| MsG0480021903.01.T01 | AT5G18210 | 32.271 | 251 | 140 | 8 | 19 | 254 | 8 | 243 | 4.21e-20 | 88.2 |
| MsG0480021903.01.T01 | AT3G05260 | 29.930 | 284 | 167 | 10 | 1 | 270 | 20 | 285 | 6.75e-20 | 87.8 |
| MsG0480021903.01.T01 | AT2G30670 | 27.170 | 265 | 162 | 7 | 19 | 271 | 7 | 252 | 1.16e-19 | 86.7 |
| MsG0480021903.01.T01 | AT2G29330 | 27.899 | 276 | 164 | 8 | 19 | 282 | 7 | 259 | 4.81e-19 | 84.7 |
| MsG0480021903.01.T01 | AT1G24360 | 29.304 | 273 | 161 | 9 | 5 | 270 | 70 | 317 | 1.05e-18 | 84.7 |
| MsG0480021903.01.T01 | AT2G29320 | 27.437 | 277 | 165 | 8 | 19 | 282 | 13 | 266 | 8.30e-18 | 81.6 |
| MsG0480021903.01.T01 | AT2G29360 | 25.993 | 277 | 179 | 9 | 5 | 271 | 1 | 261 | 1.54e-17 | 80.9 |
| MsG0480021903.01.T01 | AT2G29290 | 28.261 | 276 | 163 | 9 | 19 | 282 | 7 | 259 | 1.60e-17 | 80.5 |
| MsG0480021903.01.T01 | AT2G29340 | 26.786 | 280 | 162 | 8 | 19 | 282 | 7 | 259 | 2.41e-17 | 80.1 |
| MsG0480021903.01.T01 | AT1G07450 | 27.863 | 262 | 163 | 9 | 19 | 271 | 8 | 252 | 2.69e-17 | 80.1 |
| MsG0480021903.01.T01 | AT2G29350 | 26.996 | 263 | 160 | 8 | 21 | 271 | 17 | 259 | 3.16e-17 | 80.1 |
| MsG0480021903.01.T01 | AT2G29150 | 29.151 | 271 | 160 | 9 | 11 | 269 | 8 | 258 | 3.41e-17 | 79.7 |
| MsG0480021903.01.T01 | AT2G29260 | 28.571 | 266 | 157 | 8 | 19 | 271 | 68 | 313 | 3.62e-17 | 80.5 |
| MsG0480021903.01.T01 | AT2G29340 | 26.786 | 280 | 162 | 8 | 19 | 282 | 7 | 259 | 4.58e-17 | 80.1 |
| MsG0480021903.01.T01 | AT1G63380 | 28.676 | 272 | 172 | 8 | 12 | 271 | 14 | 275 | 7.04e-17 | 79.3 |
| MsG0480021903.01.T01 | AT1G63380 | 28.676 | 272 | 172 | 8 | 12 | 271 | 7 | 268 | 7.41e-17 | 79.0 |
| MsG0480021903.01.T01 | AT1G63380 | 28.623 | 276 | 176 | 7 | 7 | 271 | 5 | 270 | 8.30e-17 | 79.0 |
| MsG0480021903.01.T01 | AT1G63380 | 28.676 | 272 | 172 | 8 | 12 | 271 | 11 | 272 | 8.35e-17 | 79.0 |
| MsG0480021903.01.T01 | AT2G29300 | 25.843 | 267 | 164 | 8 | 19 | 271 | 7 | 253 | 9.78e-17 | 78.6 |
| MsG0480021903.01.T01 | AT2G29310 | 27.039 | 233 | 138 | 7 | 55 | 282 | 52 | 257 | 1.09e-16 | 78.2 |
| MsG0480021903.01.T01 | AT1G62610 | 28.159 | 277 | 178 | 6 | 6 | 271 | 1 | 267 | 1.12e-16 | 78.6 |
| MsG0480021903.01.T01 | AT2G29300 | 25.843 | 267 | 164 | 8 | 19 | 271 | 7 | 253 | 1.52e-16 | 78.2 |
| MsG0480021903.01.T01 | AT1G62610 | 27.305 | 282 | 180 | 7 | 1 | 271 | 1 | 268 | 1.71e-16 | 78.2 |
| MsG0480021903.01.T01 | AT2G29370 | 27.437 | 277 | 175 | 10 | 5 | 271 | 1 | 261 | 1.72e-16 | 77.8 |
| MsG0480021903.01.T01 | AT1G62610 | 28.309 | 272 | 173 | 7 | 12 | 271 | 5 | 266 | 1.77e-16 | 77.8 |
| MsG0480021903.01.T01 | AT1G07440 | 27.957 | 279 | 159 | 10 | 19 | 282 | 12 | 263 | 1.85e-16 | 77.8 |
| MsG0480021903.01.T01 | AT3G55290 | 30.303 | 264 | 162 | 8 | 19 | 271 | 18 | 270 | 1.95e-16 | 77.8 |
| MsG0480021903.01.T01 | AT1G62610 | 28.309 | 272 | 173 | 7 | 12 | 271 | 11 | 272 | 2.02e-16 | 77.8 |
| MsG0480021903.01.T01 | AT3G55290 | 29.545 | 264 | 164 | 7 | 19 | 271 | 17 | 269 | 2.17e-16 | 77.8 |
| MsG0480021903.01.T01 | AT3G55310 | 29.699 | 266 | 161 | 8 | 19 | 271 | 17 | 269 | 2.37e-16 | 77.8 |
| MsG0480021903.01.T01 | AT4G13180 | 28.520 | 277 | 171 | 9 | 5 | 270 | 1 | 261 | 4.42e-16 | 76.6 |
| MsG0480021903.01.T01 | AT2G29310 | 29.648 | 199 | 119 | 5 | 19 | 205 | 7 | 196 | 5.97e-16 | 75.1 |
| MsG0480021903.01.T01 | AT2G29290 | 27.948 | 229 | 141 | 7 | 55 | 282 | 37 | 242 | 1.73e-14 | 72.0 |
| MsG0480021903.01.T01 | AT1G49670 | 28.502 | 207 | 118 | 4 | 21 | 205 | 6 | 204 | 2.41e-14 | 73.6 |
| MsG0480021903.01.T01 | AT1G49670 | 28.502 | 207 | 118 | 4 | 21 | 205 | 6 | 204 | 2.94e-14 | 73.2 |
| MsG0480021903.01.T01 | AT5G50770 | 31.553 | 206 | 124 | 6 | 7 | 205 | 38 | 233 | 4.58e-14 | 71.6 |
| MsG0480021903.01.T01 | AT2G29350 | 28.934 | 197 | 119 | 6 | 21 | 205 | 17 | 204 | 5.49e-14 | 70.1 |
| MsG0480021903.01.T01 | AT2G29350 | 26.368 | 201 | 133 | 5 | 72 | 271 | 35 | 221 | 1.12e-13 | 69.3 |
| MsG0480021903.01.T01 | AT3G46170 | 26.937 | 271 | 177 | 7 | 12 | 271 | 18 | 278 | 4.50e-13 | 68.6 |
| MsG0480021903.01.T01 | AT5G50600 | 28.571 | 245 | 149 | 9 | 4 | 232 | 31 | 265 | 4.62e-13 | 68.9 |
| MsG0480021903.01.T01 | AT5G50700 | 28.571 | 245 | 149 | 9 | 4 | 232 | 31 | 265 | 4.62e-13 | 68.9 |
| MsG0480021903.01.T01 | AT2G17845 | 28.195 | 266 | 164 | 9 | 19 | 269 | 47 | 300 | 8.38e-13 | 67.8 |
| MsG0480021903.01.T01 | AT2G29320 | 27.230 | 213 | 136 | 6 | 72 | 282 | 53 | 248 | 1.01e-12 | 67.0 |
| MsG0480021903.01.T01 | AT2G29320 | 28.788 | 198 | 119 | 6 | 19 | 203 | 13 | 201 | 3.94e-12 | 64.7 |
| MsG0480021903.01.T01 | AT3G47350 | 29.358 | 218 | 131 | 7 | 21 | 225 | 46 | 253 | 6.29e-12 | 65.5 |
| MsG0480021903.01.T01 | AT3G47350 | 28.634 | 227 | 139 | 7 | 12 | 225 | 37 | 253 | 8.01e-12 | 65.1 |
| MsG0480021903.01.T01 | AT2G29340 | 27.979 | 193 | 118 | 5 | 19 | 199 | 7 | 190 | 8.96e-12 | 63.5 |
| MsG0480021903.01.T01 | AT2G29340 | 27.979 | 193 | 118 | 5 | 19 | 199 | 7 | 190 | 8.96e-12 | 63.5 |
Find 44 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAAATTATTTGCAGAAAA+TGG | 0.160943 | 4:+65814399 | MsG0480021903.01.T01:CDS |
| TGATTCAATGTCAGATTCTT+TGG | 0.249438 | 4:-65814511 | None:intergenic |
| CTCAAAATTTAGCTCCAAAA+AGG | 0.265907 | 4:+65814240 | MsG0480021903.01.T01:CDS |
| ATGAATGCAAGTTTGCTTAA+AGG | 0.265952 | 4:+65815098 | MsG0480021903.01.T01:CDS |
| GAACAATTGAGTGAGTTTAT+TGG | 0.274099 | 4:+65815074 | MsG0480021903.01.T01:CDS |
| TTACTTTCAATCAATCTCTT+TGG | 0.274120 | 4:+65814777 | MsG0480021903.01.T01:CDS |
| GCTCATAATCTTTCAGTTGA+TGG | 0.326713 | 4:+65815194 | MsG0480021903.01.T01:CDS |
| TGAATGCAAGTTTGCTTAAA+GGG | 0.337129 | 4:+65815099 | MsG0480021903.01.T01:CDS |
| TTTCTCTTCACTTAGGATCT+TGG | 0.355190 | 4:-65815256 | None:intergenic |
| AGAAGTGCGGCGTGTGAATT+AGG | 0.357629 | 4:+65814951 | MsG0480021903.01.T01:CDS |
| TTCAACAATGCAGGAATTGC+AGG | 0.375946 | 4:+65814579 | MsG0480021903.01.T01:CDS |
| TTGCAGCATGTTTGATTCCA+TGG | 0.396161 | 4:-65814806 | None:intergenic |
| CAGTTAACCTTTCAATATCA+TGG | 0.401447 | 4:+65814535 | MsG0480021903.01.T01:CDS |
| ACAGGTGGTGCAAGAGGAAT+TGG | 0.404629 | 4:+65814366 | MsG0480021903.01.T01:CDS |
| TGTTGAACATTATGTCCAAT+TGG | 0.431580 | 4:-65814563 | None:intergenic |
| GGTAAGGTAGCAGTTATAAC+AGG | 0.432290 | 4:+65814348 | MsG0480021903.01.T01:CDS |
| AATATCATGGAAAGGCCAAT+TGG | 0.441411 | 4:+65814548 | MsG0480021903.01.T01:CDS |
| TCAAGTGCAGCTGCAACTAT+AGG | 0.447304 | 4:+65814873 | MsG0480021903.01.T01:CDS |
| CCCGTAATTGCAGGCTATGA+AGG | 0.465657 | 4:+65814714 | MsG0480021903.01.T01:intron |
| GACATAATGTTCAACAATGC+AGG | 0.481153 | 4:+65814570 | MsG0480021903.01.T01:CDS |
| AGGGTTGCTGAATCAATTGA+TGG | 0.484224 | 4:+65814465 | MsG0480021903.01.T01:CDS |
| AATCTCTTTGGAACAATCCA+TGG | 0.489840 | 4:+65814789 | MsG0480021903.01.T01:CDS |
| TACAATGTCAAAATCAGCTA+TGG | 0.496795 | 4:+65814917 | MsG0480021903.01.T01:CDS |
| GGCCTTTCCATGATATTGAA+AGG | 0.509972 | 4:-65814542 | None:intergenic |
| TTCTAGATGAAGAAGGCACC+AGG | 0.520405 | 4:+65814445 | MsG0480021903.01.T01:CDS |
| AACCTTTCAATATCATGGAA+AGG | 0.544623 | 4:+65814540 | MsG0480021903.01.T01:CDS |
| GCAAGTTTGCTTAAAGGGAG+AGG | 0.554131 | 4:+65815104 | MsG0480021903.01.T01:CDS |
| GTTAATTGTGTTTCTCCGCA+CGG | 0.557216 | 4:+65814990 | MsG0480021903.01.T01:CDS |
| CATAATCTTTCAGTTGATGG+TGG | 0.564721 | 4:+65815197 | MsG0480021903.01.T01:CDS |
| ATGTCAAAATCAGCTATGGA+TGG | 0.568969 | 4:+65814921 | MsG0480021903.01.T01:CDS |
| ATCAATTGATTCAGCAACCC+TGG | 0.571405 | 4:-65814463 | None:intergenic |
| AAGCATAACAACACTTGACA+TGG | 0.580277 | 4:+65814740 | MsG0480021903.01.T01:CDS |
| GCTGATGTTCTAGATGAAGA+AGG | 0.589049 | 4:+65814438 | MsG0480021903.01.T01:CDS |
| GTTATAACAGGTGGTGCAAG+AGG | 0.590120 | 4:+65814360 | MsG0480021903.01.T01:CDS |
| AGTGCAGCTGCAACTATAGG+TGG | 0.592641 | 4:+65814876 | MsG0480021903.01.T01:CDS |
| AACAACTGATGATGTTGCAC+AGG | 0.603862 | 4:+65815130 | MsG0480021903.01.T01:CDS |
| GCATTCAAAAGCATCTCAGA+AGG | 0.609801 | 4:-65815017 | None:intergenic |
| ATAGGTGGATTCGCTTCACA+TGG | 0.610255 | 4:+65814891 | MsG0480021903.01.T01:CDS |
| GCTGCAAAAGCAATGATCAA+AGG | 0.629252 | 4:+65814822 | MsG0480021903.01.T01:CDS |
| AAGGTAGCAGTTATAACAGG+TGG | 0.652683 | 4:+65814351 | MsG0480021903.01.T01:CDS |
| ATCTCAGAAGGAACGCCGTG+CGG | 0.661162 | 4:-65815005 | None:intergenic |
| GGATGGATTAATGAGAAGTG+CGG | 0.667924 | 4:+65814938 | MsG0480021903.01.T01:CDS |
| TCTAGATGAAGAAGGCACCA+GGG | 0.716790 | 4:+65814446 | MsG0480021903.01.T01:CDS |
| TCTACATTCTGAATCATACG+TGG | 0.728605 | 4:-65814215 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATTTAATATCATATGAT+AGG | - | Chr4:65814298-65814317 | None:intergenic | 15.0% |
| !!! | AATTTTGGAAGAAAAAAAAA+TGG | + | Chr4:65814628-65814647 | MsG0480021903.01.T01:intron | 15.0% |
| !!! | TTTCTTTTGAAATGTTTTTA+AGG | + | Chr4:65814319-65814338 | MsG0480021903.01.T01:intron | 15.0% |
| !!! | ATAGTTTTGTTTCGATATTT+AGG | + | Chr4:65814662-65814681 | MsG0480021903.01.T01:intron | 20.0% |
| !!! | GAATGGTTTATTTTGAATTT+TGG | + | Chr4:65814613-65814632 | MsG0480021903.01.T01:intron | 20.0% |
| !!! | TTGAATGCTTTTAAATGTTA+CGG | + | Chr4:65815032-65815051 | MsG0480021903.01.T01:CDS | 20.0% |
| ! | GCAAAATTATTTGCAGAAAA+TGG | + | Chr4:65814399-65814418 | MsG0480021903.01.T01:CDS | 25.0% |
| ! | TTACTTTCAATCAATCTCTT+TGG | + | Chr4:65814777-65814796 | MsG0480021903.01.T01:CDS | 25.0% |
| !! | AACAAGATTACTAACCTTTT+TGG | - | Chr4:65814257-65814276 | None:intergenic | 25.0% |
| AACCTTTCAATATCATGGAA+AGG | + | Chr4:65814540-65814559 | MsG0480021903.01.T01:CDS | 30.0% | |
| ATGATCAAAGGTAAAAAAGG+AGG | + | Chr4:65814834-65814853 | MsG0480021903.01.T01:CDS | 30.0% | |
| CAGTTAACCTTTCAATATCA+TGG | + | Chr4:65814535-65814554 | MsG0480021903.01.T01:CDS | 30.0% | |
| GAACAATTGAGTGAGTTTAT+TGG | + | Chr4:65815074-65815093 | MsG0480021903.01.T01:CDS | 30.0% | |
| GCAATGATCAAAGGTAAAAA+AGG | + | Chr4:65814831-65814850 | MsG0480021903.01.T01:CDS | 30.0% | |
| TACAATGTCAAAATCAGCTA+TGG | + | Chr4:65814917-65814936 | MsG0480021903.01.T01:CDS | 30.0% | |
| TGATTCAATGTCAGATTCTT+TGG | - | Chr4:65814514-65814533 | None:intergenic | 30.0% | |
| TGTTGAACATTATGTCCAAT+TGG | - | Chr4:65814566-65814585 | None:intergenic | 30.0% | |
| ! | ATGAATGCAAGTTTGCTTAA+AGG | + | Chr4:65815098-65815117 | MsG0480021903.01.T01:CDS | 30.0% |
| ! | CTCAAAATTTAGCTCCAAAA+AGG | + | Chr4:65814240-65814259 | MsG0480021903.01.T01:CDS | 30.0% |
| ! | GTTTCGATATTTAGGTTCAT+CGG | + | Chr4:65814670-65814689 | MsG0480021903.01.T01:intron | 30.0% |
| ! | TGAATGCAAGTTTGCTTAAA+GGG | + | Chr4:65815099-65815118 | MsG0480021903.01.T01:CDS | 30.0% |
| !!! | GAAATGTTTTTAAGGCTACT+AGG | + | Chr4:65814327-65814346 | MsG0480021903.01.T01:intron | 30.0% |
| AAGCATAACAACACTTGACA+TGG | + | Chr4:65814740-65814759 | MsG0480021903.01.T01:CDS | 35.0% | |
| AATATCATGGAAAGGCCAAT+TGG | + | Chr4:65814548-65814567 | MsG0480021903.01.T01:CDS | 35.0% | |
| ATGTCAAAATCAGCTATGGA+TGG | + | Chr4:65814921-65814940 | MsG0480021903.01.T01:CDS | 35.0% | |
| GACATAATGTTCAACAATGC+AGG | + | Chr4:65814570-65814589 | MsG0480021903.01.T01:CDS | 35.0% | |
| GCTCATAATCTTTCAGTTGA+TGG | + | Chr4:65815194-65815213 | MsG0480021903.01.T01:CDS | 35.0% | |
| TCTACATTCTGAATCATACG+TGG | - | Chr4:65814218-65814237 | None:intergenic | 35.0% | |
| ! | ATTTAGGTTCATCGGATCAT+TGG | + | Chr4:65814678-65814697 | MsG0480021903.01.T01:intron | 35.0% |
| !! | AATCTCTTTGGAACAATCCA+TGG | + | Chr4:65814789-65814808 | MsG0480021903.01.T01:CDS | 35.0% |
| !! | CATAATCTTTCAGTTGATGG+TGG | + | Chr4:65815197-65815216 | MsG0480021903.01.T01:CDS | 35.0% |
| !!! | GTTTTTAAGGCTACTAGGTA+AGG | + | Chr4:65814332-65814351 | MsG0480021903.01.T01:intron | 35.0% |
| !!! | TTTTTGGCTAGTGATGAATC+TGG | + | Chr4:65815161-65815180 | MsG0480021903.01.T01:CDS | 35.0% |
| AAGGTAGCAGTTATAACAGG+TGG | + | Chr4:65814351-65814370 | MsG0480021903.01.T01:CDS | 40.0% | |
| AGGGTTGCTGAATCAATTGA+TGG | + | Chr4:65814465-65814484 | MsG0480021903.01.T01:CDS | 40.0% | |
| GCTGCAAAAGCAATGATCAA+AGG | + | Chr4:65814822-65814841 | MsG0480021903.01.T01:CDS | 40.0% | |
| GGCCTTTCCATGATATTGAA+AGG | - | Chr4:65814545-65814564 | None:intergenic | 40.0% | |
| GGTAAGGTAGCAGTTATAAC+AGG | + | Chr4:65814348-65814367 | MsG0480021903.01.T01:CDS | 40.0% | |
| GTTAATTGTGTTTCTCCGCA+CGG | + | Chr4:65814990-65815009 | MsG0480021903.01.T01:CDS | 40.0% | |
| TCCTTCATAGCCTGCAATTA+CGG | - | Chr4:65814718-65814737 | None:intergenic | 40.0% | |
| TTCAACAATGCAGGAATTGC+AGG | + | Chr4:65814579-65814598 | MsG0480021903.01.T01:CDS | 40.0% | |
| TTGCAGCATGTTTGATTCCA+TGG | - | Chr4:65814809-65814828 | None:intergenic | 40.0% | |
| ! | AACAACTGATGATGTTGCAC+AGG | + | Chr4:65815130-65815149 | MsG0480021903.01.T01:CDS | 40.0% |
| ! | ATCAATTGATTCAGCAACCC+TGG | - | Chr4:65814466-65814485 | None:intergenic | 40.0% |
| ! | GCTGATGTTCTAGATGAAGA+AGG | + | Chr4:65814438-65814457 | MsG0480021903.01.T01:CDS | 40.0% |
| !! | GCATTCAAAAGCATCTCAGA+AGG | - | Chr4:65815020-65815039 | None:intergenic | 40.0% |
| !! | GGATGGATTAATGAGAAGTG+CGG | + | Chr4:65814938-65814957 | MsG0480021903.01.T01:CDS | 40.0% |
| ACAATGCAGGAATTGCAGGT+AGG | + | Chr4:65814583-65814602 | MsG0480021903.01.T01:intron | 45.0% | |
| CCTTCATAGCCTGCAATTAC+GGG | - | Chr4:65814717-65814736 | None:intergenic | 45.0% | |
| GTTATAACAGGTGGTGCAAG+AGG | + | Chr4:65814360-65814379 | MsG0480021903.01.T01:CDS | 45.0% | |
| TCAAGTGCAGCTGCAACTAT+AGG | + | Chr4:65814873-65814892 | MsG0480021903.01.T01:CDS | 45.0% | |
| ! | ATAGGTGGATTCGCTTCACA+TGG | + | Chr4:65814891-65814910 | MsG0480021903.01.T01:CDS | 45.0% |
| ! | GCAAGTTTGCTTAAAGGGAG+AGG | + | Chr4:65815104-65815123 | MsG0480021903.01.T01:CDS | 45.0% |
| ! | GGTTCATCGGATCATTGGTT+TGG | + | Chr4:65814683-65814702 | MsG0480021903.01.T01:intron | 45.0% |
| ! | TGCACAGGCTGTTCTGTTTT+TGG | + | Chr4:65815145-65815164 | MsG0480021903.01.T01:CDS | 45.0% |
| !! | TCTAGATGAAGAAGGCACCA+GGG | + | Chr4:65814446-65814465 | MsG0480021903.01.T01:CDS | 45.0% |
| !! | TTCTAGATGAAGAAGGCACC+AGG | + | Chr4:65814445-65814464 | MsG0480021903.01.T01:CDS | 45.0% |
| ACAGGTGGTGCAAGAGGAAT+TGG | + | Chr4:65814366-65814385 | MsG0480021903.01.T01:CDS | 50.0% | |
| AGTGCAGCTGCAACTATAGG+TGG | + | Chr4:65814876-65814895 | MsG0480021903.01.T01:CDS | 50.0% | |
| CCCGTAATTGCAGGCTATGA+AGG | + | Chr4:65814714-65814733 | MsG0480021903.01.T01:intron | 50.0% | |
| GGAATTGCAGGTAGGTGCAA+TGG | + | Chr4:65814591-65814610 | MsG0480021903.01.T01:intron | 50.0% | |
| GTTCTAACGCCCGTAATTGC+AGG | + | Chr4:65814705-65814724 | MsG0480021903.01.T01:intron | 50.0% | |
| TGCAGGTAGGTGCAATGGAA+TGG | + | Chr4:65814596-65814615 | MsG0480021903.01.T01:intron | 50.0% | |
| ! | AGAAGTGCGGCGTGTGAATT+AGG | + | Chr4:65814951-65814970 | MsG0480021903.01.T01:CDS | 50.0% |
| ATCTCAGAAGGAACGCCGTG+CGG | - | Chr4:65815008-65815027 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 65814209 | 65815271 | 65814209 | ID=MsG0480021903.01;Name=MsG0480021903.01 |
| Chr4 | mRNA | 65814209 | 65815271 | 65814209 | ID=MsG0480021903.01.T01;Parent=MsG0480021903.01;Name=MsG0480021903.01.T01;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|3|0|285 |
| Chr4 | exon | 65814209 | 65814261 | 65814209 | ID=MsG0480021903.01.T01:exon:20676;Parent=MsG0480021903.01.T01 |
| Chr4 | exon | 65814341 | 65814600 | 65814341 | ID=MsG0480021903.01.T01:exon:20677;Parent=MsG0480021903.01.T01 |
| Chr4 | exon | 65814727 | 65815271 | 65814727 | ID=MsG0480021903.01.T01:exon:20678;Parent=MsG0480021903.01.T01 |
| Chr4 | CDS | 65814209 | 65814261 | 65814209 | ID=MsG0480021903.01.T01:cds;Parent=MsG0480021903.01.T01 |
| Chr4 | CDS | 65814341 | 65814600 | 65814341 | ID=MsG0480021903.01.T01:cds;Parent=MsG0480021903.01.T01 |
| Chr4 | CDS | 65814727 | 65815271 | 65814727 | ID=MsG0480021903.01.T01:cds;Parent=MsG0480021903.01.T01 |
| Gene Sequence |
| Protein sequence |
