AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380013811.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013811.01.T01 MTR_3g048920 98.141 269 5 0 1 269 1 269 0.0 537
MsG0380013811.01.T01 MTR_5g091930 77.778 252 53 1 18 269 15 263 1.83e-140 405
MsG0380013811.01.T01 MTR_3g051920 75.000 88 22 0 1 88 3 90 1.99e-40 140
MsG0380013811.01.T03 MTR_3g048920 77.725 211 1 1 39 249 310 474 2.74e-106 317
MsG0380013811.01.T03 MTR_5g091930 72.642 212 12 1 38 249 303 468 3.87e-101 304
MsG0380013811.01.T03 MTR_8g100030 90.000 40 2 1 1 38 3 42 3.71e-17 75.9
MsG0380013811.01.T03 MTR_3g116190 85.000 40 4 1 1 38 1 40 7.51e-17 73.6
MsG0380013811.01.T03 MTR_6g029430 87.179 39 3 1 1 37 94 132 1.80e-15 71.6
MsG0380013811.01.T03 MTR_5g092780 84.615 39 4 1 1 37 1 39 2.08e-15 70.9
MsG0380013811.01.T03 MTR_6g076070 80.000 40 6 1 1 38 1 40 3.97e-15 70.1
MsG0380013811.01.T03 MTR_6g038430 80.000 40 6 1 1 38 64 103 7.33e-15 69.3
MsG0380013811.01.T03 MTR_7g045640 82.051 39 5 1 1 37 6 44 1.21e-14 66.6
MsG0380013811.01.T03 MTR_5g089650 81.579 38 5 1 1 36 5 42 1.40e-14 68.2
MsG0380013811.01.T03 MTR_8g066785 71.739 46 10 2 1 43 29 74 2.39e-14 67.0
MsG0380013811.01.T03 MTR_3g031970 80.000 40 6 1 1 38 5 44 9.02e-14 66.2
MsG0380013811.01.T03 MTR_1g087480 35.338 133 51 6 1 131 1 100 4.22e-11 61.2
MsG0380013811.01.T03 MTR_1g043790 81.081 37 4 2 1 37 1 34 6.76e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013811.01.T01 AT2G42790 70.000 260 76 1 10 269 2 259 8.41e-129 375
MsG0380013811.01.T01 AT3G58750 70.428 257 73 1 16 269 8 264 8.42e-126 367
MsG0380013811.01.T01 AT3G58740 62.692 260 97 0 10 269 2 261 9.83e-116 341
MsG0380013811.01.T02 AT2G04865 79.310 58 12 0 82 139 245 302 1.11e-28 110
MsG0380013811.01.T02 AT2G04865 79.310 58 12 0 82 139 245 302 1.11e-28 110
MsG0380013811.01.T03 AT2G42790 67.265 223 25 2 29 249 288 464 4.93e-97 293
MsG0380013811.01.T03 AT3G58750 66.368 223 27 2 29 249 293 469 1.14e-96 292
MsG0380013811.01.T03 AT3G58740 60.664 211 33 2 39 249 302 462 2.21e-79 247

Find 185 sgRNAs with CRISPR-Local

Find 593 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCGGTTTGGGTATGGGTTC+GGG 0.178123 3:+46017289 MsG0380013811.01.T02:five_prime_UTR
GGAACTGGATTTGTTGTATA+AGG 0.186784 3:-46020479 None:intergenic
TGATCTAATTTAACAATTAT+AGG 0.209077 3:+46017553 MsG0380013811.01.T02:five_prime_UTR
ACAGGGAAAACCCGTCAAAT+TGG 0.233760 3:+46017391 MsG0380013811.01.T02:five_prime_UTR
GCTTTGGCCGTCCAACATTT+AGG 0.260824 3:-46021714 None:intergenic
AAACGAAAGCTCAGTGGTTT+TGG 0.263084 3:+46018413 MsG0380013811.01.T02:five_prime_UTR
GACCGGTTTGGGTATGGGTT+CGG 0.267597 3:+46017288 MsG0380013811.01.T02:five_prime_UTR
GATTTCCCTTTGTGCTTAGA+TGG 0.275490 3:+46021761 MsG0380013811.01.T02:CDS
ATGACATTTACAGCAGATTA+AGG 0.279807 3:-46016319 None:intergenic
CATGGCAATGGGGCGGGGTG+GGG 0.289361 3:+46016559 MsG0380013811.01.T02:five_prime_UTR
TTTACATTTGGGACCGGTTT+GGG 0.291749 3:+46017277 MsG0380013811.01.T02:five_prime_UTR
TTAAATCATAAACCATCTTT+TGG 0.294322 3:-46017497 None:intergenic
CGTCAAATTGGGTTTGGTTC+GGG 0.302615 3:+46017403 MsG0380013811.01.T02:five_prime_UTR
CGGGCGGCTAACCGCGGGTA+TGG 0.310750 3:+46017422 MsG0380013811.01.T02:five_prime_UTR
ATGAGAGGAATAATCTAAAT+AGG 0.314747 3:-46017595 None:intergenic
ATCCCCGTCCCCGACGGATT+CGG 0.315656 3:+46016673 MsG0380013811.01.T02:five_prime_UTR
TCCCCGTCCCCGACGGATTC+GGG 0.332757 3:+46016674 MsG0380013811.01.T02:five_prime_UTR
ATTTGGGACCGGTTTGGGTA+TGG 0.336621 3:+46017282 MsG0380013811.01.T02:five_prime_UTR
TTCTCTGTAGGCATGGCAAT+GGG 0.338781 3:+46016548 MsG0380013811.01.T02:five_prime_UTR
GCATGGCAATGGGGCGGGGT+GGG 0.340460 3:+46016558 MsG0380013811.01.T02:five_prime_UTR
TGTAGGCATGGCAATGGGGC+GGG 0.343102 3:+46016553 MsG0380013811.01.T02:five_prime_UTR
TTTCTCATCCCCGTTGGGTA+TGG 0.348326 3:-46016641 None:intergenic
TTTATGTGATTTCAGGGCTA+TGG 0.354411 3:+46018941 MsG0380013811.01.T02:intron
ACAAATCCAGTTCCAATTGA+TGG 0.357114 3:+46020488 MsG0380013811.01.T02:CDS
CATAGACAGGGAATACAAAA+TGG 0.359417 3:-46018541 None:intergenic
GCATGTTTCAACTGCAGTTT+GGG 0.360484 3:+46020535 MsG0380013811.01.T02:CDS
AGCATGTTTCAACTGCAGTT+TGG 0.362132 3:+46020534 MsG0380013811.01.T02:CDS
GCACGAGTTAGACGAGGATT+AGG 0.362486 3:-46017763 None:intergenic
CCGTCAAATTGGGTTTGGTT+CGG 0.362766 3:+46017402 MsG0380013811.01.T02:five_prime_UTR
GGGCGGCTAACCGCGGGTAT+GGG 0.363121 3:+46017423 MsG0380013811.01.T02:five_prime_UTR
GTTACCTAAAATTAAGTTAA+GGG 0.363311 3:-46016888 None:intergenic
GTTACCTAAAATTAAGTTAA+GGG 0.363311 3:+46017171 MsG0380013811.01.T02:five_prime_UTR
GTAGGCATGGCAATGGGGCG+GGG 0.369514 3:+46016554 MsG0380013811.01.T02:five_prime_UTR
ATGGGTATGGGACGGGTAAC+GGG 0.369764 3:-46017327 None:intergenic
TGCTGCAATTAATCTTAGAT+TGG 0.370288 3:+46016458 MsG0380013811.01.T01:CDS
GAACTGGATTTGTTGTATAA+GGG 0.371634 3:-46020478 None:intergenic
GTGCGGAGATGGGGATGGGG+CGG 0.374903 3:-46016702 None:intergenic
GGCATGGCAATGGGGCGGGG+TGG 0.375765 3:+46016557 MsG0380013811.01.T02:five_prime_UTR
TACCCAAACCCAGTCAAAAC+AGG 0.376870 3:+46017373 MsG0380013811.01.T02:five_prime_UTR
GCAATGGGGCGGGGTGGGGA+CGG 0.377819 3:+46016563 MsG0380013811.01.T02:five_prime_UTR
TCACTTTAACATTTGTTTGA+CGG 0.383473 3:+46016805 MsG0380013811.01.T02:five_prime_UTR
TTCAATTTCTCATCCCCGTT+GGG 0.387095 3:-46016646 None:intergenic
AAGCAAATAGTGCCGATTAT+CGG 0.390294 3:+46016268 MsG0380013811.01.T01:CDS
CGGGGATACCCGAATCCGTC+GGG 0.390930 3:-46016682 None:intergenic
GGCACATTGGCGGGAGTCCT+TGG 0.394748 3:+46019022 MsG0380013811.01.T02:five_prime_UTR
TTTGGGACCGGTTTGGGTAT+GGG 0.395364 3:+46017283 MsG0380013811.01.T02:five_prime_UTR
TGAGAATCGGGTATGGGGAC+GGG 0.397495 3:-46016597 None:intergenic
CATGGGTATGGGACGGGTAA+CGG 0.399554 3:-46017328 None:intergenic
TGCGGAGATGGGGATGGGGC+GGG 0.401441 3:-46016701 None:intergenic
CCGGTTTGGGTATGGGTTCG+GGG 0.402270 3:+46017290 MsG0380013811.01.T02:five_prime_UTR
TAGCAAACCTTTCCGATAAT+CGG 0.403604 3:-46016280 None:intergenic
TACCCGAATCCGTCGGGGAC+GGG 0.404089 3:-46016676 None:intergenic
AAAACCCGTCAAATTGGGTT+TGG 0.404231 3:+46017397 MsG0380013811.01.T02:five_prime_UTR
TGTATTACAACATTGCTCTT+GGG 0.404440 3:-46016766 None:intergenic
AATCCGTCGGGGACGGGGAT+GGG 0.405058 3:-46016670 None:intergenic
GTGTAAGAAAGTTTGTTAGA+TGG 0.406031 3:-46016501 None:intergenic
GTTTGGGTATGGGTTCGGGG+TGG 0.408226 3:+46017293 MsG0380013811.01.T02:five_prime_UTR
CAATGGGGCGGGGTGGGGAC+GGG 0.408782 3:+46016564 MsG0380013811.01.T02:five_prime_UTR
GCGGAGATGGGGATGGGGCG+GGG 0.410992 3:-46016700 None:intergenic
CAGAATGAAGCACGAGTAGA+TGG 0.414780 3:+46019762 MsG0380013811.01.T02:intron
ACCCGAATCCGTCGGGGACG+GGG 0.415112 3:-46016675 None:intergenic
CAGGGAAAACCCGTCAAATT+GGG 0.415829 3:+46017392 MsG0380013811.01.T02:five_prime_UTR
TTGTTACATATTCCTTAAGC+TGG 0.417840 3:+46018601 MsG0380013811.01.T02:intron
TATAGAACTGAACCATCAAT+TGG 0.420153 3:-46020500 None:intergenic
TTGGGTATGGGTAGGTTAAC+GGG 0.420731 3:-46016628 None:intergenic
TGTTACCTAAAATTAAGTTA+AGG 0.421848 3:-46016889 None:intergenic
TGTTACCTAAAATTAAGTTA+AGG 0.421848 3:+46017170 MsG0380013811.01.T02:five_prime_UTR
GGGACGGGTAACGGGTATAT+AGG 0.423247 3:-46017319 None:intergenic
TTATGTGATTTCAGGGCTAT+GGG 0.426224 3:+46018942 MsG0380013811.01.T02:intron
TTACACAAGAGGTTGTTTCC+AGG 0.427706 3:-46020658 None:intergenic
ATCATTTCAAGATTAAGCTT+TGG 0.427748 3:-46021730 None:intergenic
ATGTATTACAACATTGCTCT+TGG 0.430428 3:-46016767 None:intergenic
TGGTTCGGGCGGCTAACCGC+GGG 0.434783 3:+46017417 MsG0380013811.01.T02:five_prime_UTR
ACGGGTAAGTATATGAGAAT+CGG 0.438635 3:-46016610 None:intergenic
CCCCGAACCCATACCCAAAC+CGG 0.439485 3:-46017290 None:intergenic
AGTTTGTTAGATGGAAGAAC+AGG 0.444485 3:-46016492 None:intergenic
GAGAATCGGGTATGGGGACG+GGG 0.444974 3:-46016596 None:intergenic
GTTGGGTATGGGTAGGTTAA+CGG 0.448160 3:-46016629 None:intergenic
CCCTTTGTGCTTAGATGGAA+AGG 0.448630 3:+46021766 MsG0380013811.01.T02:CDS
TTTGGGTATGGGTTCGGGGT+GGG 0.450369 3:+46017294 MsG0380013811.01.T02:five_prime_UTR
CCTATTTCAAAACATGGGTA+TGG 0.450903 3:-46017340 None:intergenic
ACTGAACCATCAATTGGAAC+TGG 0.451788 3:-46020494 None:intergenic
TGCCAAGTATCCAGCCATAC+GGG 0.452855 3:-46019003 None:intergenic
TTAACCTACCCATACCCAAC+GGG 0.454059 3:+46016632 MsG0380013811.01.T02:five_prime_UTR
TTCAGTGCGGAGATGGGGAT+GGG 0.456661 3:-46016706 None:intergenic
AAGTATATGAGAATCGGGTA+TGG 0.458998 3:-46016604 None:intergenic
TTCTCATCCCCGTTGGGTAT+GGG 0.462345 3:-46016640 None:intergenic
AAGGTCACGGGTTCAAGTCC+TGG 0.462983 3:+46020640 MsG0380013811.01.T02:intron
CGAACCAAACCCAATTTGAC+GGG 0.468023 3:-46017401 None:intergenic
GAGGCAATTGATCAATGATC+AGG 0.468841 3:+46018637 MsG0380013811.01.T02:intron
TGAACACTACATCCAGCTTA+AGG 0.469970 3:-46018613 None:intergenic
GAATCCGTCGGGGACGGGGA+TGG 0.471992 3:-46016671 None:intergenic
TGGATACTTGGCACATTGGC+GGG 0.471996 3:+46019013 MsG0380013811.01.T02:five_prime_UTR
TCATTTCATGTTCTGCATGC+AGG 0.472168 3:-46017804 None:intergenic
CGGGTAAGTATATGAGAATC+GGG 0.472396 3:-46016609 None:intergenic
GGTCTCATAATCTTTGTATC+CGG 0.477964 3:-46019050 None:intergenic
AAAGATTATGAGACCTCAAC+AGG 0.478244 3:+46019058 MsG0380013811.01.T02:five_prime_UTR
AGTATATGAGAATCGGGTAT+GGG 0.479699 3:-46016603 None:intergenic
AACTGCAGTTTGGGAAGGAC+AGG 0.480045 3:+46020544 MsG0380013811.01.T02:CDS
AGTTGATCTTTAAATATCAA+TGG 0.480381 3:+46016836 MsG0380013811.01.T02:five_prime_UTR
TGTAATTTAGTTCTCAGTAA+TGG 0.482995 3:+46020439 MsG0380013811.01.T02:intron
CTACATCACGATTTGCAGTT+GGG 0.484321 3:-46021801 None:intergenic
GCGGGAGTCCTTGGATGATC+CGG 0.484737 3:+46019031 MsG0380013811.01.T02:five_prime_UTR
GCTGCAATTAATCTTAGATT+GGG 0.485174 3:+46016459 MsG0380013811.01.T01:CDS
ATGACTGACTTACCAAAAGA+TGG 0.485487 3:+46017485 MsG0380013811.01.T02:five_prime_UTR
TTACATGCTTGATTCTCTGT+AGG 0.486391 3:+46016536 MsG0380013811.01.T01:CDS
AAAATTATTCAGTGCGGAGA+TGG 0.486730 3:-46016713 None:intergenic
GGATCCTTCCTGTAATCAAA+AGG 0.490889 3:-46019814 None:intergenic
CCGAACCAAACCCAATTTGA+CGG 0.493095 3:-46017402 None:intergenic
ACGATAGATAATTTAAAGAA+AGG 0.495198 3:-46019087 None:intergenic
AGTTACTTTCACCTAAATGT+TGG 0.495996 3:+46021703 MsG0380013811.01.T02:CDS
ATACCCGAATCCGTCGGGGA+CGG 0.498050 3:-46016677 None:intergenic
ATTCAATTTCTCATCCCCGT+TGG 0.499711 3:-46016647 None:intergenic
ATGAGAATCGGGTATGGGGA+CGG 0.500329 3:-46016598 None:intergenic
AAATTATTCAGTGCGGAGAT+GGG 0.500772 3:-46016712 None:intergenic
TTGGTTCGGGCGGCTAACCG+CGG 0.501400 3:+46017416 MsG0380013811.01.T02:five_prime_UTR
GCGGGGATACCCGAATCCGT+CGG 0.505570 3:-46016683 None:intergenic
GTAACAGATGTAACATAGAC+AGG 0.505615 3:-46018554 None:intergenic
AGTTCTGAGAAGACGTACTT+AGG 0.508004 3:-46017459 None:intergenic
CCTTTCCATCTAAGCACAAA+GGG 0.511085 3:-46021766 None:intergenic
ATTCAGTGCGGAGATGGGGA+TGG 0.512043 3:-46016707 None:intergenic
ATTCTCTGTAGGCATGGCAA+TGG 0.513051 3:+46016547 MsG0380013811.01.T02:five_prime_UTR
CTGTAGGCATGGCAATGGGG+CGG 0.515555 3:+46016552 MsG0380013811.01.T02:five_prime_UTR
TCAAAACATGGGTATGGGAC+GGG 0.515836 3:-46017334 None:intergenic
CAAAGGATCCCGGCCAACAA+TGG 0.516149 3:-46018504 None:intergenic
TCAGTGCGGAGATGGGGATG+GGG 0.516331 3:-46016705 None:intergenic
GTATTACAACATTGCTCTTG+GGG 0.516557 3:-46016765 None:intergenic
TTAATCTTAGATTGGGAGGA+AGG 0.521685 3:+46016466 MsG0380013811.01.T01:CDS
TCCTCGTCTAACTCGTGCAC+TGG 0.521732 3:+46017768 MsG0380013811.01.T02:five_prime_UTR
CTGGATACTTGGCACATTGG+CGG 0.525933 3:+46019012 MsG0380013811.01.T02:five_prime_UTR
TGGCCGGGATCCTTTGATTG+AGG 0.527960 3:+46018511 MsG0380013811.01.T02:five_prime_UTR
AACAATTATAGGATCACGAT+AGG 0.531116 3:+46017564 MsG0380013811.01.T02:five_prime_UTR
ATCGGGTATGGGGACGGGGA+AGG 0.534704 3:-46016592 None:intergenic
AAAATATGCATCAATATCCC+TGG 0.540960 3:+46019843 MsG0380013811.01.T02:CDS
ACTACATCACGATTTGCAGT+TGG 0.541726 3:-46021802 None:intergenic
GTGCCAAGTATCCAGCCATA+CGG 0.546898 3:-46019004 None:intergenic
ATCTAACAAACTTTCTTACA+CGG 0.547021 3:+46016503 MsG0380013811.01.T01:CDS
CTGTACGCCACCTTGCATCA+AGG 0.547774 3:+46017842 MsG0380013811.01.T02:five_prime_UTR
TTAGTTCTCAGTAATGGAAG+TGG 0.550792 3:+46020445 MsG0380013811.01.T02:intron
AACAATGGAAAACACTTCCT+CGG 0.551488 3:-46018489 None:intergenic
ACAGAGAATCAAGCATGTAA+AGG 0.553968 3:-46016533 None:intergenic
TGGATAAACACCTCAATCAA+AGG 0.556712 3:-46018521 None:intergenic
GTTTCAACTGCAGTTTGGGA+AGG 0.558515 3:+46020539 MsG0380013811.01.T02:CDS
GTATATGAGAATCGGGTATG+GGG 0.560762 3:-46016602 None:intergenic
TTCAAAACATGGGTATGGGA+CGG 0.563190 3:-46017335 None:intergenic
TCTTGTGACTGTAAGGTCAC+GGG 0.564549 3:+46020628 MsG0380013811.01.T02:intron
TGCTTGATTCTCTGTAGGCA+TGG 0.565908 3:+46016541 MsG0380013811.01.T02:five_prime_UTR
GCAATTAATCTTAGATTGGG+AGG 0.568075 3:+46016462 MsG0380013811.01.T01:CDS
CATCCCCGTTGGGTATGGGT+AGG 0.568419 3:-46016636 None:intergenic
TGGCTGGATACTTGGCACAT+TGG 0.571393 3:+46019009 MsG0380013811.01.T02:five_prime_UTR
AATTATTCAGTGCGGAGATG+GGG 0.576578 3:-46016711 None:intergenic
TTTCCCCTATTTCAAAACAT+GGG 0.577654 3:-46017345 None:intergenic
CTATTTCAAAACATGGGTAT+GGG 0.580972 3:-46017339 None:intergenic
TAGTTCTCAGTAATGGAAGT+GGG 0.582754 3:+46020446 MsG0380013811.01.T02:intron
TCCTTTCCATCTAAGCACAA+AGG 0.583026 3:-46021767 None:intergenic
ACACCTCAATCAAAGGATCC+CGG 0.586499 3:-46018514 None:intergenic
CTTTGTATCCGGATCATCCA+AGG 0.587054 3:-46019039 None:intergenic
AATAGTGCCGATTATCGGAA+AGG 0.593123 3:+46016273 MsG0380013811.01.T01:CDS
TTGTTAGATGGAAGAACAGG+TGG 0.601209 3:-46016489 None:intergenic
ACTTTCACCTAAATGTTGGA+CGG 0.605625 3:+46021707 MsG0380013811.01.T02:CDS
AGCTGGATGTAGTGTTCATG+AGG 0.607629 3:+46018618 MsG0380013811.01.T02:intron
AAACTACGATCCTAGAGCAA+AGG 0.609044 3:+46018451 MsG0380013811.01.T02:five_prime_UTR
AATCCCATCCCCGTCCCCGA+CGG 0.613022 3:+46016667 MsG0380013811.01.T02:five_prime_UTR
CAAATTGGGTTTGGTTCGGG+CGG 0.613421 3:+46017406 MsG0380013811.01.T02:five_prime_UTR
AGAATACGACTTACATCACA+TGG 0.615356 3:-46021856 None:intergenic
AGAAAGGAAATAACCTGTTG+AGG 0.620319 3:-46019071 None:intergenic
GAGAGATCTACCTTGATGCA+AGG 0.625076 3:-46017852 None:intergenic
ACCCAAACCCAGTCAAAACA+GGG 0.627168 3:+46017374 MsG0380013811.01.T02:five_prime_UTR
GCCAAGTATCCAGCCATACG+GGG 0.634149 3:-46019002 None:intergenic
TGAGAAGACGTACTTAGGCA+TGG 0.636728 3:-46017454 None:intergenic
AGTATTTATATATACATGAG+AGG 0.641084 3:-46017610 None:intergenic
AGTAATGGAAGTGGGAGCAG+CGG 0.642759 3:+46020454 MsG0380013811.01.T02:CDS
TGATGCAAGGTGGCGTACAG+CGG 0.651794 3:-46017839 None:intergenic
GGGGATACCCGAATCCGTCG+GGG 0.652187 3:-46016681 None:intergenic
GTAGATGGCAGTCAAAGTTG+AGG 0.662259 3:+46019777 MsG0380013811.01.T02:exon
AGATGGAAAGGAAAACAAAG+TGG 0.668973 3:+46021778 MsG0380013811.01.T02:CDS
TAACAGATGTAACATAGACA+GGG 0.671225 3:-46018553 None:intergenic
TTTAGGAAACGAAAGCTCAG+TGG 0.675284 3:+46018407 MsG0380013811.01.T02:intron
GTTAACCTACCCATACCCAA+CGG 0.677255 3:+46016631 MsG0380013811.01.T02:five_prime_UTR
GGCAACAAAACCCATACCCG+CGG 0.684320 3:-46017433 None:intergenic
TCTCTGTAGGCATGGCAATG+GGG 0.685146 3:+46016549 MsG0380013811.01.T02:five_prime_UTR
AGATCTACCTTGATGCAAGG+TGG 0.694022 3:-46017849 None:intergenic
TCCAGTGCACGAGTTAGACG+AGG 0.700211 3:-46017769 None:intergenic
CCAAGTATCCAGCCATACGG+GGG 0.713717 3:-46019001 None:intergenic
TAACCTACCCATACCCAACG+GGG 0.737939 3:+46016633 MsG0380013811.01.T02:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTACAAAAAGAAAATTA+AGG - Chr3:46020427-46020446 None:intergenic 10.0%
!! AATTACAAAAAGAAAATTAA+GGG - Chr3:46020426-46020445 None:intergenic 10.0%
!!! ATAAAGTAATTTTTTACATT+TGG + Chr3:46017265-46017284 MsG0380013811.01.T02:five_prime_UTR 10.0%
!!! ATTATGATTAAACATTTTTT+TGG + Chr3:46014689-46014708 MsG0380013811.01.T01:intron 10.0%
!!! GATTATTTTTTTCATAAAAT+AGG + Chr3:46017080-46017099 MsG0380013811.01.T02:five_prime_UTR 10.0%
!!! TAAAGTAATTTTTTACATTT+GGG + Chr3:46017266-46017285 MsG0380013811.01.T02:five_prime_UTR 10.0%
!!! TTATGATTAAACATTTTTTT+GGG + Chr3:46014690-46014709 MsG0380013811.01.T01:intron 10.0%
!!! TTGTTATTTTATAACATAAA+GGG + Chr3:46017112-46017131 MsG0380013811.01.T02:five_prime_UTR 10.0%
!!! TTTAATGTTTATGTTATTTT+TGG - Chr3:46013271-46013290 None:intergenic 10.0%
!! AAAACAAAACAAGAAAAAAA+AGG + Chr3:46020230-46020249 MsG0380013811.01.T02:intron 15.0%
!! AAACAAAACAAGAAAAAAAA+GGG + Chr3:46020231-46020250 MsG0380013811.01.T02:intron 15.0%
!! AAATTTCATGTTTCAAAAAA+TGG + Chr3:46019218-46019237 MsG0380013811.01.T02:intron 15.0%
!! AAGAAATTTAAAAAGAAGAA+CGG - Chr3:46020206-46020225 None:intergenic 15.0%
!! AATAAAAAAATTATTCAGTG+CGG - Chr3:46016722-46016741 None:intergenic 15.0%
!! AATAAAATAGTGAAAAATTC+AGG - Chr3:46018975-46018994 None:intergenic 15.0%
!! AATATATAGATACAAATGTT+AGG - Chr3:46020314-46020333 None:intergenic 15.0%
!! ATTTGAAAAGTTAATGTATA+TGG + Chr3:46015124-46015143 MsG0380013811.01.T01:intron 15.0%
!! GAATGAAATATAAGTAAAAA+TGG - Chr3:46015181-46015200 None:intergenic 15.0%
!! TAATAAAATAAATAGCGAAA+CGG - Chr3:46020596-46020615 None:intergenic 15.0%
!! TGATCTAATTTAACAATTAT+AGG + Chr3:46017553-46017572 MsG0380013811.01.T02:five_prime_UTR 15.0%
!!! ATTAAGAAATAGAAGTTTTT+TGG + Chr3:46016739-46016758 MsG0380013811.01.T02:five_prime_UTR 15.0%
!!! ATTCTGTTACTTAAAATTAA+AGG + Chr3:46015901-46015920 MsG0380013811.01.T01:intron 15.0%
!!! ATTGTCATTTTTTAACATAA+AGG - Chr3:46016952-46016971 None:intergenic 15.0%
!!! GATTTTTATGATGAAATATT+AGG + Chr3:46013780-46013799 MsG0380013811.01.T01:intron 15.0%
!!! GTTGTTATTTTATAACATAA+AGG + Chr3:46017111-46017130 MsG0380013811.01.T02:five_prime_UTR 15.0%
!!! TATTTTTGATTTGATCAATT+GGG + Chr3:46013683-46013702 MsG0380013811.01.T01:intron 15.0%
!!! TGAATAGTTATTTTTTACTT+TGG - Chr3:46019275-46019294 None:intergenic 15.0%
!!! TGAATTTTCAATTTTAGATT+TGG + Chr3:46013650-46013669 MsG0380013811.01.T01:intron 15.0%
!!! TTATTTTTGATTTGATCAAT+TGG + Chr3:46013682-46013701 MsG0380013811.01.T01:intron 15.0%
!!! TTCTGTTACTTAAAATTAAA+GGG + Chr3:46015902-46015921 MsG0380013811.01.T01:intron 15.0%
!!! TTTTTACTTATATTTCATTC+TGG + Chr3:46015181-46015200 MsG0380013811.01.T01:intron 15.0%
!! AAAAAAATCAGATGTAGAAA+TGG - Chr3:46018859-46018878 None:intergenic 20.0%
!! AAACAAATTACTTGTAGAAT+TGG - Chr3:46020022-46020041 None:intergenic 20.0%
!! AATAGAAAATCCAGTTATAA+AGG + Chr3:46019442-46019461 MsG0380013811.01.T02:intron 20.0%
!! AATGTAGAAATTGGAAAAAT+AGG - Chr3:46015806-46015825 None:intergenic 20.0%
!! AATTATTAAAAGAAGCAGAA+AGG - Chr3:46013726-46013745 None:intergenic 20.0%
!! ACGATAGATAATTTAAAGAA+AGG - Chr3:46019090-46019109 None:intergenic 20.0%
!! AGAAATTTAAAAAGAAGAAC+GGG - Chr3:46020205-46020224 None:intergenic 20.0%
!! AGTATTTATATATACATGAG+AGG - Chr3:46017613-46017632 None:intergenic 20.0%
!! AGTTGATCTTTAAATATCAA+TGG + Chr3:46016836-46016855 MsG0380013811.01.T02:five_prime_UTR 20.0%
!! ATATATTAATTTATGGAGCA+TGG + Chr3:46019384-46019403 MsG0380013811.01.T02:intron 20.0%
!! CAATCTTATTCAAATATTCT+GGG - Chr3:46018911-46018930 None:intergenic 20.0%
!! CGTTACAAAAAAAAAGATAA+AGG - Chr3:46016922-46016941 None:intergenic 20.0%
!! CTAACAAAATTCTCAAATAA+CGG - Chr3:46021312-46021331 None:intergenic 20.0%
!! GGTAAAAGTAACAAAAAAAT+GGG + Chr3:46019239-46019258 MsG0380013811.01.T02:intron 20.0%
!! GTAGAATTGGAATAAATTAA+AGG - Chr3:46020009-46020028 None:intergenic 20.0%
!! GTTACCTAAAATTAAGTTAA+GGG + Chr3:46017171-46017190 MsG0380013811.01.T02:five_prime_UTR 20.0%
!! GTTACCTAAAATTAAGTTAA+GGG - Chr3:46017190-46017171 None:intergenic 20.0%
!! TCAACAATTTCTTATATTGA+TGG + Chr3:46014117-46014136 MsG0380013811.01.T01:CDS 20.0%
!! TCAATCTTATTCAAATATTC+TGG - Chr3:46018912-46018931 None:intergenic 20.0%
!! TCGTTACAAAAAAAAGATAA+AGG + Chr3:46017140-46017159 MsG0380013811.01.T02:five_prime_UTR 20.0%
!! TGGTAAAAGTAACAAAAAAA+TGG + Chr3:46019238-46019257 MsG0380013811.01.T02:intron 20.0%
!! TGTTACCTAAAATTAAGTTA+AGG + Chr3:46017170-46017189 MsG0380013811.01.T02:five_prime_UTR 20.0%
!! TGTTACCTAAAATTAAGTTA+AGG - Chr3:46017189-46017170 None:intergenic 20.0%
!! TTAAATTATCTATCGTGTTA+TGG + Chr3:46019094-46019113 MsG0380013811.01.T02:intron 20.0%
!! TTGTCATGTTAATAAAAACT+AGG - Chr3:46017215-46017234 None:intergenic 20.0%
!! TTTATGATGAAATATTAGGT+GGG + Chr3:46013784-46013803 MsG0380013811.01.T01:intron 20.0%
!! TTTGTAGTAAATAGCATATT+TGG - Chr3:46015394-46015413 None:intergenic 20.0%
!!! AACTATGTTGTTTATTCTTT+AGG + Chr3:46018390-46018409 MsG0380013811.01.T02:intron 20.0%
!!! ACTTTGTTATTTCATTTAAC+TGG + Chr3:46014971-46014990 MsG0380013811.01.T01:intron 20.0%
!!! ATCTAAGATACTCTAAATTT+TGG + Chr3:46016060-46016079 MsG0380013811.01.T01:intron 20.0%
!!! CTCTAATAATTTTTTGCTTA+AGG - Chr3:46014303-46014322 None:intergenic 20.0%
!!! CTTTTTGCTTATATTTCATT+CGG - Chr3:46015101-46015120 None:intergenic 20.0%
!!! GATAATCAAATAATTTTAGC+TGG + Chr3:46014402-46014421 MsG0380013811.01.T01:intron 20.0%
!!! TGAGTTTGATGAATTTTTTT+TGG + Chr3:46017050-46017069 MsG0380013811.01.T02:five_prime_UTR 20.0%
!!! TGATTCTTAACTTTATTTTG+TGG + Chr3:46015769-46015788 MsG0380013811.01.T01:intron 20.0%
!!! TTAAATCATAAACCATCTTT+TGG - Chr3:46017500-46017519 None:intergenic 20.0%
!!! TTACATTTTCTCAATTATAC+TGG + Chr3:46021592-46021611 MsG0380013811.01.T02:intron 20.0%
!!! TTAGTCTTTTGTTCTTTTAA+GGG + Chr3:46020151-46020170 MsG0380013811.01.T02:intron 20.0%
!!! TTCATATATGTTTTAATGCA+GGG + Chr3:46016211-46016230 MsG0380013811.01.T01:intron 20.0%
!!! TTTAGTCTTTTGTTCTTTTA+AGG + Chr3:46020150-46020169 MsG0380013811.01.T02:intron 20.0%
!!! TTTCATATATGTTTTAATGC+AGG + Chr3:46016210-46016229 MsG0380013811.01.T01:intron 20.0%
!!! TTTTATGATGAAATATTAGG+TGG + Chr3:46013783-46013802 MsG0380013811.01.T01:intron 20.0%
!!! TTTTTGCTTATATTTCATTC+GGG - Chr3:46015100-46015119 None:intergenic 20.0%
!!! TTTTTTGGGATCAAATTTTA+TGG + Chr3:46014704-46014723 MsG0380013811.01.T01:intron 20.0%
! AAAATAGTGAAAAATTCAGG+TGG - Chr3:46018972-46018991 None:intergenic 25.0%
! AAAGAACAAAAGACTAAAGA+AGG - Chr3:46020148-46020167 None:intergenic 25.0%
! AAATTTGCCAATACATCAAA+AGG - Chr3:46020120-46020139 None:intergenic 25.0%
! AAGAACCTAGAAGAAATAAA+AGG - Chr3:46018291-46018310 None:intergenic 25.0%
! AATAAAAGGTAACATTAACC+TGG - Chr3:46018277-46018296 None:intergenic 25.0%
! AATACAAAAAATGCTCATGA+GGG - Chr3:46018121-46018140 None:intergenic 25.0%
! AATCTATTCAAATGTTACAC+CGG + Chr3:46013957-46013976 MsG0380013811.01.T01:intron 25.0%
! AGTTACAAATGTAACATATG+AGG - Chr3:46014351-46014370 None:intergenic 25.0%
! ATAATTACACTTGAGAGATT+AGG - Chr3:46014660-46014679 None:intergenic 25.0%
! ATCATTTCAAGATTAAGCTT+TGG - Chr3:46021733-46021752 None:intergenic 25.0%
! ATCTAACAAACTTTCTTACA+CGG + Chr3:46016503-46016522 MsG0380013811.01.T01:CDS 25.0%
! ATGAGAGGAATAATCTAAAT+AGG - Chr3:46017598-46017617 None:intergenic 25.0%
! ATGCCATTATTTGATTATGT+AGG + Chr3:46018731-46018750 MsG0380013811.01.T02:intron 25.0%
! CAACATATAACAAGATTCTT+TGG - Chr3:46017979-46017998 None:intergenic 25.0%
! CATTGTCAAAATGTAGAAAT+TGG - Chr3:46015815-46015834 None:intergenic 25.0%
! CTACCTACATAATCAAATAA+TGG - Chr3:46018737-46018756 None:intergenic 25.0%
! GATAATTGTTATGTTAACAG+TGG + Chr3:46015000-46015019 MsG0380013811.01.T01:intron 25.0%
! GCTATATTATAGCAACTATT+TGG - Chr3:46015423-46015442 None:intergenic 25.0%
! GGATTACCTATATATTAATC+CGG - Chr3:46018838-46018857 None:intergenic 25.0%
! GTTAATTCTTCCTTTATAAC+TGG - Chr3:46019455-46019474 None:intergenic 25.0%
! TAAGCATGTAGTATTCAAAA+TGG + Chr3:46014513-46014532 MsG0380013811.01.T01:intron 25.0%
! TAATCATATGTTGAAACCTA+TGG - Chr3:46020048-46020067 None:intergenic 25.0%
! TACTTATATTTCATTCTGGT+GGG + Chr3:46015185-46015204 MsG0380013811.01.T01:intron 25.0%
! TATCAATAAAGATTGCTGAT+TGG + Chr3:46018310-46018329 MsG0380013811.01.T02:intron 25.0%
! TCAACTAACTAAGTATCAAT+TGG + Chr3:46019144-46019163 MsG0380013811.01.T02:intron 25.0%
! TCACTTTAACATTTGTTTGA+CGG + Chr3:46016805-46016824 MsG0380013811.01.T02:five_prime_UTR 25.0%
! TCATCAAACTTTATAGCATT+TGG - Chr3:46019673-46019692 None:intergenic 25.0%
! TTACTTATATTTCATTCTGG+TGG + Chr3:46015184-46015203 MsG0380013811.01.T01:intron 25.0%
! TTGAATAAGATTGATCTGAT+GGG + Chr3:46018918-46018937 MsG0380013811.01.T02:intron 25.0%
! TTTGAATAAGATTGATCTGA+TGG + Chr3:46018917-46018936 MsG0380013811.01.T02:intron 25.0%
!! AAATATCAATGGTAGCTTTT+AGG + Chr3:46016847-46016866 MsG0380013811.01.T02:five_prime_UTR 25.0%
!! TAAACTTTTCCAAGTCTTTT+TGG + Chr3:46017903-46017922 MsG0380013811.01.T02:intron 25.0%
!! TAGTCCCTTAACTTAATTTT+AGG + Chr3:46016884-46016903 MsG0380013811.01.T02:five_prime_UTR 25.0%
!! TAGTCCCTTAACTTAATTTT+AGG - Chr3:46016903-46016884 None:intergenic 25.0%
!! TCGATTTGTTTCAATGAATA+AGG - Chr3:46020280-46020299 None:intergenic 25.0%
!! TTTGAGAATTTTGTTAGATG+CGG + Chr3:46021315-46021334 MsG0380013811.01.T02:intron 25.0%
!!! AAGATACTCTAAATTTTGGT+AGG + Chr3:46016064-46016083 MsG0380013811.01.T01:intron 25.0%
!!! AAGTAATTTGTTTGTTCCAT+AGG + Chr3:46020029-46020048 MsG0380013811.01.T02:intron 25.0%
!!! AATTACTTCCTTTTGATTAC+AGG + Chr3:46019806-46019825 MsG0380013811.01.T02:CDS 25.0%
!!! ATCGTGATGTAGTTTTTTAT+CGG + Chr3:46021812-46021831 MsG0380013811.01.T02:CDS 25.0%
!!! ATTGATGCATATTTTAGTGA+TGG - Chr3:46019838-46019857 None:intergenic 25.0%
!!! ATTTTAGTGTTGTCAAATAG+CGG + Chr3:46015322-46015341 MsG0380013811.01.T01:intron 25.0%
!!! CTTTTTTCCTTTTGATGTAT+TGG + Chr3:46020110-46020129 MsG0380013811.01.T02:intron 25.0%
!!! GCAGAACTTTATTTTTTGTT+AGG + Chr3:46016127-46016146 MsG0380013811.01.T01:intron 25.0%
!!! TAATTTTTTACATTTGGGAC+CGG + Chr3:46017271-46017290 MsG0380013811.01.T02:five_prime_UTR 25.0%
!!! TGTAATTTAGTTCTCAGTAA+TGG + Chr3:46020439-46020458 MsG0380013811.01.T02:intron 25.0%
!!! TGTTACCTTTTATTTCTTCT+AGG + Chr3:46018283-46018302 MsG0380013811.01.T02:intron 25.0%
!!! TTTGAGTTCCTTGAATTTTA+AGG + Chr3:46014634-46014653 MsG0380013811.01.T01:intron 25.0%
AAAATATGCATCAATATCCC+TGG + Chr3:46019843-46019862 MsG0380013811.01.T02:CDS 30.0%
AAACCTATCTTGAGAAAATG+AGG - Chr3:46015073-46015092 None:intergenic 30.0%
AACAATTATAGGATCACGAT+AGG + Chr3:46017564-46017583 MsG0380013811.01.T02:five_prime_UTR 30.0%
AAGAAGAAACTTCTTTACCA+GGG - Chr3:46019863-46019882 None:intergenic 30.0%
AATAAAAAGACTCATGCTAG+TGG + Chr3:46013880-46013899 MsG0380013811.01.T01:intron 30.0%
AATAACGGCAAATACATTAC+AGG - Chr3:46021297-46021316 None:intergenic 30.0%
AATATAGCTCCATTTCATAG+TGG + Chr3:46015435-46015454 MsG0380013811.01.T01:intron 30.0%
AATCACCTTCTTGAAATCAT+TGG - Chr3:46013574-46013593 None:intergenic 30.0%
AATGCAACCTTCAATTATAC+AGG + Chr3:46018182-46018201 MsG0380013811.01.T02:intron 30.0%
AATTTAAAAAGAAGAACGGG+AGG - Chr3:46020202-46020221 None:intergenic 30.0%
ACTGGTGTATTTATCTAACT+TGG + Chr3:46015501-46015520 MsG0380013811.01.T01:intron 30.0%
ACTTCTCGAAAAGAAATGAA+TGG - Chr3:46015294-46015313 None:intergenic 30.0%
AGAACAGTTATATAACAGTC+AGG - Chr3:46020787-46020806 None:intergenic 30.0%
AGATTAGGCCTTAAAATTCA+AGG - Chr3:46014645-46014664 None:intergenic 30.0%
AGTTCTGCTCATAATATTAG+AGG - Chr3:46016115-46016134 None:intergenic 30.0%
ATAACGGCAAATACATTACA+GGG - Chr3:46021296-46021315 None:intergenic 30.0%
ATGACATTTACAGCAGATTA+AGG - Chr3:46016322-46016341 None:intergenic 30.0%
ATGCACTTGTATAATGAATG+TGG + Chr3:46015714-46015733 MsG0380013811.01.T01:intron 30.0%
ATGTATTACAACATTGCTCT+TGG - Chr3:46016770-46016789 None:intergenic 30.0%
ATTTGCATCAGGATGAAAAA+TGG - Chr3:46015621-46015640 None:intergenic 30.0%
CAAAAACACAATACTGAGTT+TGG + Chr3:46019483-46019502 MsG0380013811.01.T02:intron 30.0%
CAAAACAAGAAAAAAAAGGG+AGG + Chr3:46020234-46020253 MsG0380013811.01.T02:intron 30.0%
CAATACAAAAAATGCTCATG+AGG - Chr3:46018122-46018141 None:intergenic 30.0%
CAATTTCCATCACAAAAGTA+AGG - Chr3:46015751-46015770 None:intergenic 30.0%
CCTTTGTCATGATACTTTAA+AGG + Chr3:46015256-46015275 MsG0380013811.01.T01:intron 30.0%
CGTTAATACATTACATTAGC+AGG + Chr3:46020809-46020828 MsG0380013811.01.T02:intron 30.0%
CTATTTCAAAACATGGGTAT+GGG - Chr3:46017342-46017361 None:intergenic 30.0%
GATAGAGTCTTCTATTTGAA+TGG - Chr3:46016004-46016023 None:intergenic 30.0%
GATCCACATATCATAAACAA+AGG - Chr3:46014754-46014773 None:intergenic 30.0%
GCTGCAATTAATCTTAGATT+GGG + Chr3:46016459-46016478 MsG0380013811.01.T01:CDS 30.0%
GCTTATCTTCTTTATCTTGT+AGG + Chr3:46021234-46021253 MsG0380013811.01.T02:intron 30.0%
GTAGAAATTGGAAAAATAGG+AGG - Chr3:46015803-46015822 None:intergenic 30.0%
GTAGAACACTTAAAAAGAAG+AGG - Chr3:46021455-46021474 None:intergenic 30.0%
GTTCAAATTCCACTATGAAA+TGG - Chr3:46015447-46015466 None:intergenic 30.0%
GTTTGAAAGAACAATGACAA+AGG - Chr3:46021477-46021496 None:intergenic 30.0%
TAAAGGGACTTTGTTAAGAA+AGG + Chr3:46015918-46015937 MsG0380013811.01.T01:intron 30.0%
TAACAGATGTAACATAGACA+GGG - Chr3:46018556-46018575 None:intergenic 30.0%
TAAGAAGAAACTTCTTTACC+AGG - Chr3:46019864-46019883 None:intergenic 30.0%
TACACCTAAACAGATTGAAT+TGG + Chr3:46020887-46020906 MsG0380013811.01.T02:intron 30.0%
TATAGAACTGAACCATCAAT+TGG - Chr3:46020503-46020522 None:intergenic 30.0%
TATTAATTTATGGAGCATGG+TGG + Chr3:46019387-46019406 MsG0380013811.01.T02:intron 30.0%
TCTACTCCGGATTAATATAT+AGG + Chr3:46018829-46018848 MsG0380013811.01.T02:five_prime_UTR 30.0%
TGCTGCAATTAATCTTAGAT+TGG + Chr3:46016458-46016477 MsG0380013811.01.T01:CDS 30.0%
TGTAAATTCTTGTGACTGTA+AGG + Chr3:46020621-46020640 MsG0380013811.01.T02:intron 30.0%
TGTATTACAACATTGCTCTT+GGG - Chr3:46016769-46016788 None:intergenic 30.0%
TGTTTCAATGAATAAGGACA+AGG - Chr3:46020274-46020293 None:intergenic 30.0%
TTGTTACATATTCCTTAAGC+TGG + Chr3:46018601-46018620 MsG0380013811.01.T02:intron 30.0%
TTTCCCCTATTTCAAAACAT+GGG - Chr3:46017348-46017367 None:intergenic 30.0%
! AGTTACTTTCACCTAAATGT+TGG + Chr3:46021703-46021722 MsG0380013811.01.T02:CDS 30.0%
! ATGCATATCTTTTCAGTGTA+TGG + Chr3:46014838-46014857 MsG0380013811.01.T01:intron 30.0%
! GTTCTGTCAATTTGTAGTTT+TGG + Chr3:46019979-46019998 MsG0380013811.01.T02:intron 30.0%
! TTGAGAATTTTGTTAGATGC+GGG + Chr3:46021316-46021335 MsG0380013811.01.T02:intron 30.0%
! TTTTCCCCTATTTCAAAACA+TGG - Chr3:46017349-46017368 None:intergenic 30.0%
!! CCTTTAAAGTATCATGACAA+AGG - Chr3:46015259-46015278 None:intergenic 30.0%
!! GAACTGGATTTGTTGTATAA+GGG - Chr3:46020481-46020500 None:intergenic 30.0%
!! GTGTAAGAAAGTTTGTTAGA+TGG - Chr3:46016504-46016523 None:intergenic 30.0%
!! GTTGCATAACATTGTTTTGT+AGG + Chr3:46015526-46015545 MsG0380013811.01.T01:intron 30.0%
!! TCTTATATTGATGGTGATGA+GGG + Chr3:46014126-46014145 MsG0380013811.01.T01:CDS 30.0%
!! TGTATACCTTACTTTTGTGA+TGG + Chr3:46015742-46015761 MsG0380013811.01.T01:intron 30.0%
!! TTCTTATATTGATGGTGATG+AGG + Chr3:46014125-46014144 MsG0380013811.01.T01:CDS 30.0%
!!! ATACCCATGTTTTGAAATAG+GGG + Chr3:46017342-46017361 MsG0380013811.01.T02:five_prime_UTR 30.0%
!!! CATACCCATGTTTTGAAATA+GGG + Chr3:46017341-46017360 MsG0380013811.01.T02:five_prime_UTR 30.0%
!!! TGATGTAGTTTTTTATCGGA+AGG + Chr3:46021816-46021835 MsG0380013811.01.T02:CDS 30.0%
!!! TGTTTATTTTGACGTTTGTC+TGG + Chr3:46015855-46015874 MsG0380013811.01.T01:intron 30.0%
!!! TTTTTTAAGACCTTTGCTCT+AGG - Chr3:46018464-46018483 None:intergenic 30.0%
AAAATTATTCAGTGCGGAGA+TGG - Chr3:46016716-46016735 None:intergenic 35.0%
AAAGATGTCGCACTATTGAT+TGG + Chr3:46021018-46021037 MsG0380013811.01.T02:intron 35.0%
AAAGATTATGAGACCTCAAC+AGG + Chr3:46019058-46019077 MsG0380013811.01.T02:five_prime_UTR 35.0%
AAATTATTCAGTGCGGAGAT+GGG - Chr3:46016715-46016734 None:intergenic 35.0%
AACAATGGAAAACACTTCCT+CGG - Chr3:46018492-46018511 None:intergenic 35.0%
AAGTATATGAGAATCGGGTA+TGG - Chr3:46016607-46016626 None:intergenic 35.0%
AATGTCAACGACTACAACAA+CGG + Chr3:46013326-46013345 MsG0380013811.01.T01:intron 35.0%
ACAAATCCAGTTCCAATTGA+TGG + Chr3:46020488-46020507 MsG0380013811.01.T02:CDS 35.0%
ACAACCTCTTGTGTAAAAAC+AGG + Chr3:46020665-46020684 MsG0380013811.01.T02:CDS 35.0%
ACACTTCAAAACTTGATCAG+TGG + Chr3:46020859-46020878 MsG0380013811.01.T02:intron 35.0%
ACAGAGAATCAAGCATGTAA+AGG - Chr3:46016536-46016555 None:intergenic 35.0%
ACGGGTAAGTATATGAGAAT+CGG - Chr3:46016613-46016632 None:intergenic 35.0%
ACTTTCACCTAAATGTTGGA+CGG + Chr3:46021707-46021726 MsG0380013811.01.T02:CDS 35.0%
AGAAAGGAAATAACCTGTTG+AGG - Chr3:46019074-46019093 None:intergenic 35.0%
AGAATACGACTTACATCACA+TGG - Chr3:46021859-46021878 None:intergenic 35.0%
AGAGTCACAAAACAATGTTG+AGG + Chr3:46014437-46014456 MsG0380013811.01.T01:intron 35.0%
AGATGGAAAGGAAAACAAAG+TGG + Chr3:46021778-46021797 MsG0380013811.01.T02:CDS 35.0%
AGCATTTGGTTGAAAATACG+AGG - Chr3:46019659-46019678 None:intergenic 35.0%
AGTAATGCTTAAGAAGCTGT+AGG + Chr3:46020087-46020106 MsG0380013811.01.T02:intron 35.0%
AGTATATGAGAATCGGGTAT+GGG - Chr3:46016606-46016625 None:intergenic 35.0%
ATATAGAGGATACCCAATTG+AGG + Chr3:46014158-46014177 MsG0380013811.01.T01:CDS 35.0%
ATCAACACCACTGCAAATAA+GGG - Chr3:46018013-46018032 None:intergenic 35.0%
CAAAGCCAATGATTTCAAGA+AGG + Chr3:46013566-46013585 MsG0380013811.01.T01:CDS 35.0%
CAACCTCTTGTGTAAAAACA+GGG + Chr3:46020666-46020685 MsG0380013811.01.T02:CDS 35.0%
CATAGACAGGGAATACAAAA+TGG - Chr3:46018544-46018563 None:intergenic 35.0%
CATATGAGATATGACACTTC+CGG - Chr3:46014207-46014226 None:intergenic 35.0%
CCTATTTCAAAACATGGGTA+TGG - Chr3:46017343-46017362 None:intergenic 35.0%
CTCAAAATGCTGAGTGAAAT+TGG + Chr3:46018210-46018229 MsG0380013811.01.T02:five_prime_UTR 35.0%
GAAATTGGAAAAATAGGAGG+AGG - Chr3:46015800-46015819 None:intergenic 35.0%
GAACTTTGTATAGTGATTGC+AGG - Chr3:46015237-46015256 None:intergenic 35.0%
GAGAAGAAATCAAATCACAC+CGG - Chr3:46013979-46013998 None:intergenic 35.0%
GAGCAGTGTTTAAATATCCA+GGG - Chr3:46014089-46014108 None:intergenic 35.0%
GAGCTAACGAGGTAATTAAA+TGG + Chr3:46018088-46018107 MsG0380013811.01.T02:intron 35.0%
GATTAGTATTAAGACTTCGC+AGG + Chr3:46020063-46020082 MsG0380013811.01.T02:intron 35.0%
GCAATTAATCTTAGATTGGG+AGG + Chr3:46016462-46016481 MsG0380013811.01.T01:CDS 35.0%
GGTATCTTCGAGATTGAAAA+AGG + Chr3:46019115-46019134 MsG0380013811.01.T02:intron 35.0%
GGTCTCATAATCTTTGTATC+CGG - Chr3:46019053-46019072 None:intergenic 35.0%
GGTCTTAAAAAAATTGACCG+AGG + Chr3:46018472-46018491 MsG0380013811.01.T02:five_prime_UTR 35.0%
GGTGTATTTATCTAACTTGG+TGG + Chr3:46015504-46015523 MsG0380013811.01.T01:intron 35.0%
GTAACAGATGTAACATAGAC+AGG - Chr3:46018557-46018576 None:intergenic 35.0%
GTATTACAACATTGCTCTTG+GGG - Chr3:46016768-46016787 None:intergenic 35.0%
GTGGCTGTTATTATCAGTAT+TGG + Chr3:46015019-46015038 MsG0380013811.01.T01:intron 35.0%
TAAGAAATTGTTGATCGCAC+AGG - Chr3:46014111-46014130 None:intergenic 35.0%
TAGATTTACACCAGCATATC+CGG - Chr3:46013943-46013962 None:intergenic 35.0%
TAGCAAACCTTTCCGATAAT+CGG - Chr3:46016283-46016302 None:intergenic 35.0%
TAGCGTTAAACATCCACTAA+TGG - Chr3:46021418-46021437 None:intergenic 35.0%
TATGACAAGAATTTACACCC+CGG - Chr3:46020763-46020782 None:intergenic 35.0%
TCTGCCAATTCAATCTGTTT+AGG - Chr3:46020894-46020913 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + Chr3:46020671-46020690 MsG0380013811.01.T02:intron 35.0%
TGCAAGTCAGTTACAAGAAT+GGG + Chr3:46014873-46014892 MsG0380013811.01.T01:CDS 35.0%
TGGATAAACACCTCAATCAA+AGG - Chr3:46018524-46018543 None:intergenic 35.0%
TGTTGCTCTATCAATTCCAT+TGG - Chr3:46021207-46021226 None:intergenic 35.0%
TTAATCTTAGATTGGGAGGA+AGG + Chr3:46016466-46016485 MsG0380013811.01.T01:CDS 35.0%
TTACATGCTTGATTCTCTGT+AGG + Chr3:46016536-46016555 MsG0380013811.01.T01:CDS 35.0%
TTAGACCAAACTGTATCTTC+TGG - Chr3:46017936-46017955 None:intergenic 35.0%
TTATGTGATTTCAGGGCTAT+GGG + Chr3:46018942-46018961 MsG0380013811.01.T02:intron 35.0%
TTATTATGCGTATGCAGTGT+TGG + Chr3:46021680-46021699 MsG0380013811.01.T02:intron 35.0%
TTGGGTATCCTCTATATCTA+AGG - Chr3:46014155-46014174 None:intergenic 35.0%
TTTATGTGATTTCAGGGCTA+TGG + Chr3:46018941-46018960 MsG0380013811.01.T02:intron 35.0%
TTTGCATCTCAGTTAGTCAA+TGG - Chr3:46014791-46014810 None:intergenic 35.0%
! AAAACTCAAAGCACCATTAG+TGG + Chr3:46021402-46021421 MsG0380013811.01.T02:intron 35.0%
! AACAATACCCTTATTTGCAG+TGG + Chr3:46018003-46018022 MsG0380013811.01.T02:intron 35.0%
! AACGCTTTTCACTTGAATGT+CGG + Chr3:46020976-46020995 MsG0380013811.01.T02:intron 35.0%
! AAGATGTCGCACTATTGATT+GGG + Chr3:46021019-46021038 MsG0380013811.01.T02:intron 35.0%
! AATAGCGAAACGGAAAGTAT+TGG - Chr3:46020586-46020605 None:intergenic 35.0%
! AATTCCATTGGAGCATCATT+TGG - Chr3:46021195-46021214 None:intergenic 35.0%
! ATGACTGACTTACCAAAAGA+TGG + Chr3:46017485-46017504 MsG0380013811.01.T02:five_prime_UTR 35.0%
! ATGTTTCTCATCTTTTCAGC+TGG + Chr3:46015681-46015700 MsG0380013811.01.T01:intron 35.0%
! CAATTTCACTCAGCATTTTG+AGG - Chr3:46018212-46018231 None:intergenic 35.0%
! CATGATACTTTAAAGGAGAG+TGG + Chr3:46015263-46015282 MsG0380013811.01.T01:intron 35.0%
! CTACGACATGTATTTTGCAA+TGG + Chr3:46020385-46020404 MsG0380013811.01.T02:intron 35.0%
! CTGATGAGTATTTTGTCAAG+AGG + Chr3:46018784-46018803 MsG0380013811.01.T02:five_prime_UTR 35.0%
! GACATGTATTTTGCAATGGA+GGG + Chr3:46020389-46020408 MsG0380013811.01.T02:intron 35.0%
! GATGGGTTTATGTGATTTCA+GGG + Chr3:46018935-46018954 MsG0380013811.01.T02:intron 35.0%
! TACTTTAAAGGAGAGTGGTT+AGG + Chr3:46015268-46015287 MsG0380013811.01.T01:intron 35.0%
! TAGTTCTCAGTAATGGAAGT+GGG + Chr3:46020446-46020465 MsG0380013811.01.T02:intron 35.0%
! TCAAATTTTATGGCCTGACA+TGG + Chr3:46014714-46014733 MsG0380013811.01.T01:intron 35.0%
! TCCGAGATACTTTTCACAAA+CGG - Chr3:46021097-46021116 None:intergenic 35.0%
! TGGCCTTTGTTTATGATATG+TGG + Chr3:46014748-46014767 MsG0380013811.01.T01:intron 35.0%
! TTAGTTCTCAGTAATGGAAG+TGG + Chr3:46020445-46020464 MsG0380013811.01.T02:intron 35.0%
! TTGCCTCATTTTCTCAAGAT+AGG + Chr3:46015067-46015086 MsG0380013811.01.T01:intron 35.0%
!! AAGCAAATAGTGCCGATTAT+CGG + Chr3:46016268-46016287 MsG0380013811.01.T01:CDS 35.0%
!! ACTTCCTTTTGATTACAGGA+AGG + Chr3:46019810-46019829 MsG0380013811.01.T02:CDS 35.0%
!! AGTTTGTTAGATGGAAGAAC+AGG - Chr3:46016495-46016514 None:intergenic 35.0%
!! CTTATATTGATGGTGATGAG+GGG + Chr3:46014127-46014146 MsG0380013811.01.T01:CDS 35.0%
!! CTTGAAATCATTGGCTTTGA+CGG - Chr3:46013565-46013584 None:intergenic 35.0%
!! GAAAGTGTTGTTTGTGTAAC+TGG + Chr3:46019322-46019341 MsG0380013811.01.T02:intron 35.0%
!! GGAACTGGATTTGTTGTATA+AGG - Chr3:46020482-46020501 None:intergenic 35.0%
!! TCCGTTTGTGAAAAGTATCT+CGG + Chr3:46021093-46021112 MsG0380013811.01.T02:intron 35.0%
!! TGATGGGTTTATGTGATTTC+AGG + Chr3:46018934-46018953 MsG0380013811.01.T02:intron 35.0%
!!! AGTTTTTTATCGGAAGGCTT+TGG + Chr3:46021822-46021841 MsG0380013811.01.T02:CDS 35.0%
!!! CCATACCCATGTTTTGAAAT+AGG + Chr3:46017340-46017359 MsG0380013811.01.T02:five_prime_UTR 35.0%
!!! TGTGTAACTGGTTTTTGTGA+AGG + Chr3:46019334-46019353 MsG0380013811.01.T02:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - Chr3:46020672-46020691 None:intergenic 35.0%
AAAACCCGTCAAATTGGGTT+TGG + Chr3:46017397-46017416 MsG0380013811.01.T02:five_prime_UTR 40.0%
AAAAGACTCATGCTAGTGGA+CGG + Chr3:46013884-46013903 MsG0380013811.01.T01:intron 40.0%
AAACAAAGGCCATAACAGCA+GGG - Chr3:46014740-46014759 None:intergenic 40.0%
AAACTACGATCCTAGAGCAA+AGG + Chr3:46018451-46018470 MsG0380013811.01.T02:five_prime_UTR 40.0%
AAGTGTGTTCATGACATCTG+AGG - Chr3:46020845-46020864 None:intergenic 40.0%
AATTATTCAGTGCGGAGATG+GGG - Chr3:46016714-46016733 None:intergenic 40.0%
ACATATGTGCGACGTCTAAT+CGG - Chr3:46014575-46014594 None:intergenic 40.0%
ACCATATTCTTGACCACTAC+AGG + Chr3:46021261-46021280 MsG0380013811.01.T02:intron 40.0%
ACTACATCACGATTTGCAGT+TGG - Chr3:46021805-46021824 None:intergenic 40.0%
ACTGAACCATCAATTGGAAC+TGG - Chr3:46020497-46020516 None:intergenic 40.0%
AGCATGTTTCAACTGCAGTT+TGG + Chr3:46020534-46020553 MsG0380013811.01.T02:CDS 40.0%
AGGACAGCCTGTATAATTGA+AGG - Chr3:46018192-46018211 None:intergenic 40.0%
AGTGTGTTCATGACATCTGA+GGG - Chr3:46020844-46020863 None:intergenic 40.0%
ATGTCCAAATGATGCTCCAA+TGG + Chr3:46021188-46021207 MsG0380013811.01.T02:intron 40.0%
ATTCAATTTCTCATCCCCGT+TGG - Chr3:46016650-46016669 None:intergenic 40.0%
ATTGAATTGGCAGAGAAAGC+TGG + Chr3:46020900-46020919 MsG0380013811.01.T02:intron 40.0%
ATTGATGGGGAACCTGATAT+AGG + Chr3:46021048-46021067 MsG0380013811.01.T02:intron 40.0%
CAACGTGTCAATGATATGTC+TGG + Chr3:46021618-46021637 MsG0380013811.01.T02:intron 40.0%
CAATAGTGCGACATCTTTGA+GGG - Chr3:46021016-46021035 None:intergenic 40.0%
CAGTGCAGAAAAATGCATAG+TGG - Chr3:46017726-46017745 None:intergenic 40.0%
CATCAACACCACTGCAAATA+AGG - Chr3:46018014-46018033 None:intergenic 40.0%
CCAATGACCAATTAATCAGG+GGG - Chr3:46013919-46013938 None:intergenic 40.0%
CCCAATGACCAATTAATCAG+GGG - Chr3:46013920-46013939 None:intergenic 40.0%
CCCCTGATTAATTGGTCATT+GGG + Chr3:46013917-46013936 MsG0380013811.01.T01:intron 40.0%
CCTTTCCATCTAAGCACAAA+GGG - Chr3:46021769-46021788 None:intergenic 40.0%
CGGGTAAGTATATGAGAATC+GGG - Chr3:46016612-46016631 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + Chr3:46020697-46020716 MsG0380013811.01.T02:intron 40.0%
CTACATCACGATTTGCAGTT+GGG - Chr3:46021804-46021823 None:intergenic 40.0%
CTATATGTGACCCTGCATAA+AGG - Chr3:46014268-46014287 None:intergenic 40.0%
CTGCAAGTCAGTTACAAGAA+TGG + Chr3:46014872-46014891 MsG0380013811.01.T01:CDS 40.0%
CTTGAATGTCGGTGAAATGA+CGG + Chr3:46020987-46021006 MsG0380013811.01.T02:intron 40.0%
CTTGACCACTACAGGAAATA+AGG + Chr3:46021269-46021288 MsG0380013811.01.T02:intron 40.0%
GAAATTGAAAGTAACTGCGC+CGG - Chr3:46021572-46021591 None:intergenic 40.0%
GAGGAAACTCTAATGCATGT+GGG - Chr3:46019640-46019659 None:intergenic 40.0%
GAGGCAATTGATCAATGATC+AGG + Chr3:46018637-46018656 MsG0380013811.01.T02:intron 40.0%
GATGTATACACTGCTATTGC+TGG + Chr3:46018030-46018049 MsG0380013811.01.T02:five_prime_UTR 40.0%
GATTTCCCTTTGTGCTTAGA+TGG + Chr3:46021761-46021780 MsG0380013811.01.T02:CDS 40.0%
GCATGTTTCAACTGCAGTTT+GGG + Chr3:46020535-46020554 MsG0380013811.01.T02:CDS 40.0%
GCATTAACAAGTACACCCAA+AGG - Chr3:46015584-46015603 None:intergenic 40.0%
GCCCAATGACCAATTAATCA+GGG - Chr3:46013921-46013940 None:intergenic 40.0%
GCTTTCCAGAAGATACAGTT+TGG + Chr3:46017928-46017947 MsG0380013811.01.T02:intron 40.0%
GGAGCAGTGTTTAAATATCC+AGG - Chr3:46014090-46014109 None:intergenic 40.0%
GGATCCTTCCTGTAATCAAA+AGG - Chr3:46019817-46019836 None:intergenic 40.0%
GTATATGAGAATCGGGTATG+GGG - Chr3:46016605-46016624 None:intergenic 40.0%
GTATGCGTAAGACCTATATC+AGG - Chr3:46021063-46021082 None:intergenic 40.0%
GTGCATGAAACCTTTATGCA+GGG + Chr3:46014255-46014274 MsG0380013811.01.T01:intron 40.0%
TAAACAAAGGCCATAACAGC+AGG - Chr3:46014741-46014760 None:intergenic 40.0%
TATGTAGGTAGTTGTTGCCT+TGG + Chr3:46018746-46018765 MsG0380013811.01.T02:intron 40.0%
TCAACTAGACCAGAGATAAG+TGG - Chr3:46020937-46020956 None:intergenic 40.0%
TCAATAGTGCGACATCTTTG+AGG - Chr3:46021017-46021036 None:intergenic 40.0%
TCAGATAGTCCACTTATCTC+TGG + Chr3:46020925-46020944 MsG0380013811.01.T02:intron 40.0%
TCATTTCATGTTCTGCATGC+AGG - Chr3:46017807-46017826 None:intergenic 40.0%
TCCTGTAGTGGTCAAGAATA+TGG - Chr3:46021265-46021284 None:intergenic 40.0%
TCCTTTCCATCTAAGCACAA+AGG - Chr3:46021770-46021789 None:intergenic 40.0%
TCTCAGCTAACTCCTCAATT+GGG - Chr3:46014173-46014192 None:intergenic 40.0%
TCTCTGGTCTAGTTGAATGA+TGG + Chr3:46020941-46020960 MsG0380013811.01.T02:intron 40.0%
TGAACACTACATCCAGCTTA+AGG - Chr3:46018616-46018635 None:intergenic 40.0%
TGATTAATTGGTCATTGGGC+CGG + Chr3:46013921-46013940 MsG0380013811.01.T01:intron 40.0%
TGTGCATGAAACCTTTATGC+AGG + Chr3:46014254-46014273 MsG0380013811.01.T01:intron 40.0%
TTCAAAACATGGGTATGGGA+CGG - Chr3:46017338-46017357 None:intergenic 40.0%
TTCAATTTCTCATCCCCGTT+GGG - Chr3:46016649-46016668 None:intergenic 40.0%
TTCTCAGCTAACTCCTCAAT+TGG - Chr3:46014174-46014193 None:intergenic 40.0%
TTCTTGTGACTGTAAGGTCA+CGG + Chr3:46020627-46020646 MsG0380013811.01.T02:intron 40.0%
TTGCGGCAGTAGAAAATATG+AGG - Chr3:46019734-46019753 None:intergenic 40.0%
TTGCTTTGCAGATATCAGCT+GGG + Chr3:46014034-46014053 MsG0380013811.01.T01:intron 40.0%
TTGTTAGATGGAAGAACAGG+TGG - Chr3:46016492-46016511 None:intergenic 40.0%
TTTAGGAAACGAAAGCTCAG+TGG + Chr3:46018407-46018426 MsG0380013811.01.T02:intron 40.0%
TTTGCTTTGCAGATATCAGC+TGG + Chr3:46014033-46014052 MsG0380013811.01.T01:intron 40.0%
! AAACGAAAGCTCAGTGGTTT+TGG + Chr3:46018413-46018432 MsG0380013811.01.T02:five_prime_UTR 40.0%
! AAGTGTTTTCCATTGTTGGC+CGG + Chr3:46018495-46018514 MsG0380013811.01.T02:five_prime_UTR 40.0%
! ACTGTTGTTGATGAACGTAC+TGG + Chr3:46013504-46013523 MsG0380013811.01.T01:CDS 40.0%
! AGTATTGAAGTCTCTCCTGA+TGG + Chr3:46013537-46013556 MsG0380013811.01.T01:CDS 40.0%
! CACTATGCATTTTTCTGCAC+TGG + Chr3:46017724-46017743 MsG0380013811.01.T02:five_prime_UTR 40.0%
! CGACATGTATTTTGCAATGG+AGG + Chr3:46020388-46020407 MsG0380013811.01.T02:intron 40.0%
! CTGTTGTTGATGAACGTACT+GGG + Chr3:46013505-46013524 MsG0380013811.01.T01:CDS 40.0%
! TCATTCTTGTACAGAGCACT+AGG + Chr3:46021366-46021385 MsG0380013811.01.T02:intron 40.0%
! TTACACAAGAGGTTGTTTCC+AGG - Chr3:46020661-46020680 None:intergenic 40.0%
! TTCATTCTGAGGGGAAATTG+CGG - Chr3:46019751-46019770 None:intergenic 40.0%
! TTTACATTTGGGACCGGTTT+GGG + Chr3:46017277-46017296 MsG0380013811.01.T02:five_prime_UTR 40.0%
!! AATAGTGCCGATTATCGGAA+AGG + Chr3:46016273-46016292 MsG0380013811.01.T01:CDS 40.0%
!! AGTTCTGAGAAGACGTACTT+AGG - Chr3:46017462-46017481 None:intergenic 40.0%
!! CATTTTTCTGCACTGGCAAT+CGG + Chr3:46017731-46017750 MsG0380013811.01.T02:five_prime_UTR 40.0%
!! CCAAATGTTGACTTCTACTC+CGG + Chr3:46018816-46018835 MsG0380013811.01.T02:five_prime_UTR 40.0%
!! TCATTGAAGGTGTTAAAGCC+AGG + Chr3:46018256-46018275 MsG0380013811.01.T02:five_prime_UTR 40.0%
!! TCTTGTAACTGACTTGCAGA+AGG - Chr3:46014871-46014890 None:intergenic 40.0%
!! TTTATTTGCTATCCCCCGTA+TGG + Chr3:46018989-46019008 MsG0380013811.01.T02:five_prime_UTR 40.0%
!! TTTTACATTTGGGACCGGTT+TGG + Chr3:46017276-46017295 MsG0380013811.01.T02:five_prime_UTR 40.0%
!! TTTTGACTGGGTTTGGGTAT+GGG - Chr3:46017372-46017391 None:intergenic 40.0%
!!! ACTGGTTTTTGTGAAGGAAG+TGG + Chr3:46019340-46019359 MsG0380013811.01.T02:intron 40.0%
!!! GAGGAAGTGTTTTCCATTGT+TGG + Chr3:46018491-46018510 MsG0380013811.01.T02:five_prime_UTR 40.0%
AAAAGCAAATGCGAGGTGCA+GGG + Chr3:46019531-46019550 MsG0380013811.01.T02:intron 45.0%
ACACCTCAATCAAAGGATCC+CGG - Chr3:46018517-46018536 None:intergenic 45.0%
ACAGAATCGGGTTACACAAG+TGG + Chr3:46021123-46021142 MsG0380013811.01.T02:intron 45.0%
ACAGGGAAAACCCGTCAAAT+TGG + Chr3:46017391-46017410 MsG0380013811.01.T02:five_prime_UTR 45.0%
ACATTACATTAGCAGGAGCG+CGG + Chr3:46020816-46020835 MsG0380013811.01.T02:intron 45.0%
ACCCAAACCCAGTCAAAACA+GGG + Chr3:46017374-46017393 MsG0380013811.01.T02:five_prime_UTR 45.0%
AGACAGAGCAATCTTCTCCA+AGG - Chr3:46018766-46018785 None:intergenic 45.0%
AGATCTACCTTGATGCAAGG+TGG - Chr3:46017852-46017871 None:intergenic 45.0%
AGCTCGTAAAAGCAAATGCG+AGG + Chr3:46019524-46019543 MsG0380013811.01.T02:intron 45.0%
AGCTGGATGTAGTGTTCATG+AGG + Chr3:46018618-46018637 MsG0380013811.01.T02:intron 45.0%
ATCAGCTGGGAAGAATGACA+AGG + Chr3:46014047-46014066 MsG0380013811.01.T01:CDS 45.0%
ATTCTCTGTAGGCATGGCAA+TGG + Chr3:46016547-46016566 MsG0380013811.01.T02:five_prime_UTR 45.0%
CAACACTCAGCTTTACCACA+GGG + Chr3:46014910-46014929 MsG0380013811.01.T01:CDS 45.0%
CAGAATGAAGCACGAGTAGA+TGG + Chr3:46019762-46019781 MsG0380013811.01.T02:intron 45.0%
CAGGGAAAACCCGTCAAATT+GGG + Chr3:46017392-46017411 MsG0380013811.01.T02:five_prime_UTR 45.0%
CCCCCTGATTAATTGGTCAT+TGG + Chr3:46013916-46013935 MsG0380013811.01.T01:intron 45.0%
CCCTTTGTGCTTAGATGGAA+AGG + Chr3:46021766-46021785 MsG0380013811.01.T02:CDS 45.0%
CCGAACCAAACCCAATTTGA+CGG - Chr3:46017405-46017424 None:intergenic 45.0%
CCGGAGTAGAAGTCAACATT+TGG - Chr3:46018819-46018838 None:intergenic 45.0%
CCTCAAGATGCACATCCTTT+GGG + Chr3:46015566-46015585 MsG0380013811.01.T01:CDS 45.0%
CGAACATCGAAGAATGACAC+CGG + Chr3:46021550-46021569 MsG0380013811.01.T02:intron 45.0%
CGAACCAAACCCAATTTGAC+GGG - Chr3:46017404-46017423 None:intergenic 45.0%
CGAGGAAACTCTAATGCATG+TGG - Chr3:46019641-46019660 None:intergenic 45.0%
CTACTCGTGCTTCATTCTGA+GGG - Chr3:46019761-46019780 None:intergenic 45.0%
CTATATGGACCTCTTCATGG+TGG + Chr3:46018066-46018085 MsG0380013811.01.T02:five_prime_UTR 45.0%
CTTTGTATCCGGATCATCCA+AGG - Chr3:46019042-46019061 None:intergenic 45.0%
GAGAGATCTACCTTGATGCA+AGG - Chr3:46017855-46017874 None:intergenic 45.0%
GAGATATGACACTTCCGGAA+AGG - Chr3:46014202-46014221 None:intergenic 45.0%
GAGGGGATCCTTAGATATAG+AGG + Chr3:46014144-46014163 MsG0380013811.01.T01:CDS 45.0%
GCATCTCAGTTAGTCAATGG+TGG - Chr3:46014788-46014807 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + Chr3:46020696-46020715 MsG0380013811.01.T02:intron 45.0%
GCTCTATATGGACCTCTTCA+TGG + Chr3:46018063-46018082 MsG0380013811.01.T02:five_prime_UTR 45.0%
GCTGCGTACAATACACCAAA+TGG + Chr3:46020693-46020712 MsG0380013811.01.T02:intron 45.0%
GGAAAGCAGCCAAAAAGACT+TGG - Chr3:46017915-46017934 None:intergenic 45.0%
GGACTCAAACTTTATGACCC+TGG + Chr3:46014069-46014088 MsG0380013811.01.T01:CDS 45.0%
GGCCCAATGACCAATTAATC+AGG - Chr3:46013922-46013941 None:intergenic 45.0%
GTAGATGGCAGTCAAAGTTG+AGG + Chr3:46019777-46019796 MsG0380013811.01.T02:exon 45.0%
GTATACACTGCTATTGCTGG+CGG + Chr3:46018033-46018052 MsG0380013811.01.T02:five_prime_UTR 45.0%
GTTAACCTACCCATACCCAA+CGG + Chr3:46016631-46016650 MsG0380013811.01.T02:five_prime_UTR 45.0%
GTTGGGTATGGGTAGGTTAA+CGG - Chr3:46016632-46016651 None:intergenic 45.0%
GTTTCAACTGCAGTTTGGGA+AGG + Chr3:46020539-46020558 MsG0380013811.01.T02:CDS 45.0%
TAAAAGCAAATGCGAGGTGC+AGG + Chr3:46019530-46019549 MsG0380013811.01.T02:intron 45.0%
TACCCAAACCCAGTCAAAAC+AGG + Chr3:46017373-46017392 MsG0380013811.01.T02:five_prime_UTR 45.0%
TACTCGTGCTTCATTCTGAG+GGG - Chr3:46019760-46019779 None:intergenic 45.0%
TCAAAACATGGGTATGGGAC+GGG - Chr3:46017337-46017356 None:intergenic 45.0%
TCAACACTCAGCTTTACCAC+AGG + Chr3:46014909-46014928 MsG0380013811.01.T01:CDS 45.0%
TCAGCTGGGAAGAATGACAA+GGG + Chr3:46014048-46014067 MsG0380013811.01.T01:CDS 45.0%
TCTACTCGTGCTTCATTCTG+AGG - Chr3:46019762-46019781 None:intergenic 45.0%
TCTCGGAAGAGCAACAGAAT+CGG + Chr3:46021110-46021129 MsG0380013811.01.T02:intron 45.0%
TCTTGTGACTGTAAGGTCAC+GGG + Chr3:46020628-46020647 MsG0380013811.01.T02:intron 45.0%
TGAGAAGACGTACTTAGGCA+TGG - Chr3:46017457-46017476 None:intergenic 45.0%
TGATTGGGCTCGCAATTGAT+GGG + Chr3:46021034-46021053 MsG0380013811.01.T02:intron 45.0%
TGCTTGATTCTCTGTAGGCA+TGG + Chr3:46016541-46016560 MsG0380013811.01.T02:five_prime_UTR 45.0%
TGGATGTTTAACGCTACTGC+AGG + Chr3:46021422-46021441 MsG0380013811.01.T02:intron 45.0%
TTAACCTACCCATACCCAAC+GGG + Chr3:46016632-46016651 MsG0380013811.01.T02:five_prime_UTR 45.0%
TTCACAAACGGAACTGCATG+AGG - Chr3:46021085-46021104 None:intergenic 45.0%
TTCTCTGTAGGCATGGCAAT+GGG + Chr3:46016548-46016567 MsG0380013811.01.T02:five_prime_UTR 45.0%
TTGATTGGGCTCGCAATTGA+TGG + Chr3:46021033-46021052 MsG0380013811.01.T02:intron 45.0%
TTGGGTATGGGTAGGTTAAC+GGG - Chr3:46016631-46016650 None:intergenic 45.0%
! AGGGACCTTATTTCCTGTAG+TGG - Chr3:46021277-46021296 None:intergenic 45.0%
! AGTGTTTTCCATTGTTGGCC+GGG + Chr3:46018496-46018515 MsG0380013811.01.T02:five_prime_UTR 45.0%
! CCGTCAAATTGGGTTTGGTT+CGG + Chr3:46017402-46017421 MsG0380013811.01.T02:five_prime_UTR 45.0%
! CGATCTGCGATTGATAACAC+TGG + Chr3:46015483-46015502 MsG0380013811.01.T01:intron 45.0%
! CGTCAAATTGGGTTTGGTTC+GGG + Chr3:46017403-46017422 MsG0380013811.01.T02:five_prime_UTR 45.0%
! TGCTTTTACGAGCTACACGT+AGG - Chr3:46019518-46019537 None:intergenic 45.0%
!! AGCTGAGAAAAGCACCTTTC+CGG + Chr3:46014185-46014204 MsG0380013811.01.T01:CDS 45.0%
!! AGCTTTACCACAGGGTGTTT+TGG + Chr3:46014918-46014937 MsG0380013811.01.T01:CDS 45.0%
!! GTGTTACTTACTCTGAGAGC+AGG - Chr3:46015644-46015663 None:intergenic 45.0%
!!! GGGTTTTCCCTGTTTTGACT+GGG - Chr3:46017384-46017403 None:intergenic 45.0%
!!! GTTTTGACTGGGTTTGGGTA+TGG - Chr3:46017373-46017392 None:intergenic 45.0%
!!! TCCCTGTTTTGACTGGGTTT+GGG - Chr3:46017378-46017397 None:intergenic 45.0%
!!! TTCCCTGTTTTGACTGGGTT+TGG - Chr3:46017379-46017398 None:intergenic 45.0%
!! TATATATTAGTTAAAAAAAA+TGG + Chr3:46020326-46020345 MsG0380013811.01.T02:intron 5.0%
!! TTAGTTTATATATTAATTTA+TGG + Chr3:46019377-46019396 MsG0380013811.01.T02:intron 5.0%
AACTGCAGTTTGGGAAGGAC+AGG + Chr3:46020544-46020563 MsG0380013811.01.T02:CDS 50.0%
AAGCTCACCAAAACACCCTG+TGG - Chr3:46014928-46014947 None:intergenic 50.0%
AATCGGGTTACACAAGTGGC+GGG + Chr3:46021127-46021146 MsG0380013811.01.T02:intron 50.0%
AGAAGAACGGGAGGATGCAA+TGG - Chr3:46020193-46020212 None:intergenic 50.0%
AGCGTTCCCTTGACATTGGA+CGG - Chr3:46013483-46013502 None:intergenic 50.0%
AGGTGCAGGGTAAGACAAAG+AGG + Chr3:46019544-46019563 MsG0380013811.01.T02:intron 50.0%
AGTGAGCGTTCCCTTGACAT+TGG - Chr3:46013487-46013506 None:intergenic 50.0%
ATGAGAATCGGGTATGGGGA+CGG - Chr3:46016601-46016620 None:intergenic 50.0%
CCCAAAGGATGTGCATCTTG+AGG - Chr3:46015569-46015588 None:intergenic 50.0%
CTCGGAAGAGCAACAGAATC+GGG + Chr3:46021111-46021130 MsG0380013811.01.T02:intron 50.0%
CTGAGAGCAGGATTTGCATC+AGG - Chr3:46015632-46015651 None:intergenic 50.0%
CTGGATACTTGGCACATTGG+CGG + Chr3:46019012-46019031 MsG0380013811.01.T02:five_prime_UTR 50.0%
GAATCGGGTTACACAAGTGG+CGG + Chr3:46021126-46021145 MsG0380013811.01.T02:intron 50.0%
GAGCTGTGAGGGTGGATAAA+CGG - Chr3:46013380-46013399 None:intergenic 50.0%
GATTGGGCTCGCAATTGATG+GGG + Chr3:46021035-46021054 MsG0380013811.01.T02:intron 50.0%
GCACGAGTTAGACGAGGATT+AGG - Chr3:46017766-46017785 None:intergenic 50.0%
GCAGGGTAAGACAAAGAGGA+AGG + Chr3:46019548-46019567 MsG0380013811.01.T02:intron 50.0%
GCCTCAAGATGCACATCCTT+TGG + Chr3:46015565-46015584 MsG0380013811.01.T01:CDS 50.0%
GCGGGATGGTGAAGCTAAAT+TGG + Chr3:46021145-46021164 MsG0380013811.01.T02:intron 50.0%
GCTTTGGCCGTCCAACATTT+AGG - Chr3:46021717-46021736 None:intergenic 50.0%
GTGCCAAGTATCCAGCCATA+CGG - Chr3:46019007-46019026 None:intergenic 50.0%
TAACCTACCCATACCCAACG+GGG + Chr3:46016633-46016652 MsG0380013811.01.T02:five_prime_UTR 50.0%
TAGATGCGGGCAATATGCCT+GGG + Chr3:46021329-46021348 MsG0380013811.01.T02:intron 50.0%
TCGTTAGCTCCACCATGAAG+AGG - Chr3:46018078-46018097 None:intergenic 50.0%
TCTCCACCGTCCAATGTCAA+GGG + Chr3:46013474-46013493 MsG0380013811.01.T01:CDS 50.0%
TCTCTGTAGGCATGGCAATG+GGG + Chr3:46016549-46016568 MsG0380013811.01.T02:five_prime_UTR 50.0%
TGCCAAGTATCCAGCCATAC+GGG - Chr3:46019006-46019025 None:intergenic 50.0%
TGGAGAGATCCCAGAAGAAG+CGG - Chr3:46013460-46013479 None:intergenic 50.0%
TGGATACTTGGCACATTGGC+GGG + Chr3:46019013-46019032 MsG0380013811.01.T02:five_prime_UTR 50.0%
TGGCTGGATACTTGGCACAT+TGG + Chr3:46019009-46019028 MsG0380013811.01.T02:five_prime_UTR 50.0%
TTAGATGCGGGCAATATGCC+TGG + Chr3:46021328-46021347 MsG0380013811.01.T02:intron 50.0%
TTCTCATCCCCGTTGGGTAT+GGG - Chr3:46016643-46016662 None:intergenic 50.0%
TTTCTCATCCCCGTTGGGTA+TGG - Chr3:46016644-46016663 None:intergenic 50.0%
! AGTAATGGAAGTGGGAGCAG+CGG + Chr3:46020454-46020473 MsG0380013811.01.T02:CDS 50.0%
! TCTTCATGGTGGAGCTAACG+AGG + Chr3:46018077-46018096 MsG0380013811.01.T02:five_prime_UTR 50.0%
!! ATTTGGGACCGGTTTGGGTA+TGG + Chr3:46017282-46017301 MsG0380013811.01.T02:five_prime_UTR 50.0%
!! CAAATTGGGTTTGGTTCGGG+CGG + Chr3:46017406-46017425 MsG0380013811.01.T02:five_prime_UTR 50.0%
!! GGATTGGCCCCCTGATTAAT+TGG + Chr3:46013909-46013928 MsG0380013811.01.T01:intron 50.0%
!! TTTGGGACCGGTTTGGGTAT+GGG + Chr3:46017283-46017302 MsG0380013811.01.T02:five_prime_UTR 50.0%
!!! CGGGTTTTCCCTGTTTTGAC+TGG - Chr3:46017385-46017404 None:intergenic 50.0%
AAGAAGCGGAGAGGTGGAGA+GGG - Chr3:46013446-46013465 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + Chr3:46020640-46020659 MsG0380013811.01.T02:intron 55.0%
ACGGGAGGATGCAATGGACA+AGG - Chr3:46020187-46020206 None:intergenic 55.0%
ACTGCTATTGCTGGCGGTGT+TGG + Chr3:46018039-46018058 MsG0380013811.01.T02:five_prime_UTR 55.0%
AGATCCCAGAAGAAGCGGAG+AGG - Chr3:46013455-46013474 None:intergenic 55.0%
AGGAAGCAGGTGAGCTGTGA+GGG - Chr3:46013391-46013410 None:intergenic 55.0%
ATGGGTATGGGACGGGTAAC+GGG - Chr3:46017330-46017349 None:intergenic 55.0%
ATTCAGTGCGGAGATGGGGA+TGG - Chr3:46016710-46016729 None:intergenic 55.0%
CAAAGGATCCCGGCCAACAA+TGG - Chr3:46018507-46018526 None:intergenic 55.0%
CATAACAGCAGGGCCATGTC+AGG - Chr3:46014730-46014749 None:intergenic 55.0%
CATGGGTATGGGACGGGTAA+CGG - Chr3:46017331-46017350 None:intergenic 55.0%
CCAAGTATCCAGCCATACGG+GGG - Chr3:46019004-46019023 None:intergenic 55.0%
CTCTCCACCGTCCAATGTCA+AGG + Chr3:46013473-46013492 MsG0380013811.01.T01:CDS 55.0%
CTGACATGGCCCTGCTGTTA+TGG + Chr3:46014728-46014747 MsG0380013811.01.T01:intron 55.0%
CTGTACGCCACCTTGCATCA+AGG + Chr3:46017842-46017861 MsG0380013811.01.T02:five_prime_UTR 55.0%
GCCAAGTATCCAGCCATACG+GGG - Chr3:46019005-46019024 None:intergenic 55.0%
GCGGCTATAGCGCTGTAACA+TGG + Chr3:46015341-46015360 MsG0380013811.01.T01:intron 55.0%
GGCAACAAAACCCATACCCG+CGG - Chr3:46017436-46017455 None:intergenic 55.0%
GTTCCCTTGACATTGGACGG+TGG - Chr3:46013480-46013499 None:intergenic 55.0%
TAGGAAGCAGGTGAGCTGTG+AGG - Chr3:46013392-46013411 None:intergenic 55.0%
TCCACCTCTCCGCTTCTTCT+GGG + Chr3:46013448-46013467 MsG0380013811.01.T01:CDS 55.0%
TCCAGTGCACGAGTTAGACG+AGG - Chr3:46017772-46017791 None:intergenic 55.0%
TCCTCGTCTAACTCGTGCAC+TGG + Chr3:46017768-46017787 MsG0380013811.01.T02:five_prime_UTR 55.0%
TGAGAATCGGGTATGGGGAC+GGG - Chr3:46016600-46016619 None:intergenic 55.0%
TGATGCAAGGTGGCGTACAG+CGG - Chr3:46017842-46017861 None:intergenic 55.0%
TGGCCGGGATCCTTTGATTG+AGG + Chr3:46018511-46018530 MsG0380013811.01.T02:five_prime_UTR 55.0%
TTCAGTGCGGAGATGGGGAT+GGG - Chr3:46016709-46016728 None:intergenic 55.0%
TTTGGGTATGGGTTCGGGGT+GGG + Chr3:46017294-46017313 MsG0380013811.01.T02:five_prime_UTR 55.0%
! AGACTCATGCTAGTGGACGG+TGG + Chr3:46013887-46013906 MsG0380013811.01.T01:intron 55.0%
! ATGCTAGTGGACGGTGGGAT+TGG + Chr3:46013893-46013912 MsG0380013811.01.T01:intron 55.0%
! GACTCATGCTAGTGGACGGT+GGG + Chr3:46013888-46013907 MsG0380013811.01.T01:intron 55.0%
! GGCGGTGTTGGAGCTCTATA+TGG + Chr3:46018051-46018070 MsG0380013811.01.T02:five_prime_UTR 55.0%
! TTTGCTATCCCCCGTATGGC+TGG + Chr3:46018993-46019012 MsG0380013811.01.T02:five_prime_UTR 55.0%
!! ACCGGTTTGGGTATGGGTTC+GGG + Chr3:46017289-46017308 MsG0380013811.01.T02:five_prime_UTR 55.0%
!! GACCGGTTTGGGTATGGGTT+CGG + Chr3:46017288-46017307 MsG0380013811.01.T02:five_prime_UTR 55.0%
!! GGGACGGGTAACGGGTATAT+AGG - Chr3:46017322-46017341 None:intergenic 55.0%
!! TTGGCTTTGACGGTGCCATC+AGG - Chr3:46013555-46013574 None:intergenic 55.0%
AAGCAGGTGAGCTGTGAGGG+TGG - Chr3:46013388-46013407 None:intergenic 60.0%
ACTGAAGCTCCCGCATACGC+AGG - Chr3:46020737-46020756 None:intergenic 60.0%
ATACCCGAATCCGTCGGGGA+CGG - Chr3:46016680-46016699 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + Chr3:46020741-46020760 MsG0380013811.01.T02:intron 60.0%
CATCCCCGTTGGGTATGGGT+AGG - Chr3:46016639-46016658 None:intergenic 60.0%
CCCCCGTATGGCTGGATACT+TGG + Chr3:46019001-46019020 MsG0380013811.01.T02:five_prime_UTR 60.0%
CCCCGAACCCATACCCAAAC+CGG - Chr3:46017293-46017312 None:intergenic 60.0%
CGAAGATGCACGACGCTGCA+CGG + Chr3:46013352-46013371 MsG0380013811.01.T01:CDS 60.0%
CTCCACCTCTCCGCTTCTTC+TGG + Chr3:46013447-46013466 MsG0380013811.01.T01:CDS 60.0%
CTGAAGCTCCCGCATACGCA+GGG - Chr3:46020736-46020755 None:intergenic 60.0%
CTGTAGGCATGGCAATGGGG+CGG + Chr3:46016552-46016571 MsG0380013811.01.T02:five_prime_UTR 60.0%
GAAGAAGCGGAGAGGTGGAG+AGG - Chr3:46013447-46013466 None:intergenic 60.0%
GAGAATCGGGTATGGGGACG+GGG - Chr3:46016599-46016618 None:intergenic 60.0%
GAGCTACACGTAGGCGCAGT+TGG - Chr3:46019509-46019528 None:intergenic 60.0%
GCGGGAGTCCTTGGATGATC+CGG + Chr3:46019031-46019050 MsG0380013811.01.T02:five_prime_UTR 60.0%
GGTCATTGGGCCGGATATGC+TGG + Chr3:46013930-46013949 MsG0380013811.01.T01:intron 60.0%
GTTTGGGTATGGGTTCGGGG+TGG + Chr3:46017293-46017312 MsG0380013811.01.T02:five_prime_UTR 60.0%
TCAGTGCGGAGATGGGGATG+GGG - Chr3:46016708-46016727 None:intergenic 60.0%
TCCCAGAAGAAGCGGAGAGG+TGG - Chr3:46013452-46013471 None:intergenic 60.0%
TGTAGGCATGGCAATGGGGC+GGG + Chr3:46016553-46016572 MsG0380013811.01.T02:five_prime_UTR 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + Chr3:46020709-46020728 MsG0380013811.01.T02:intron 60.0%
! GGGTTACACAAGTGGCGGGA+TGG + Chr3:46021131-46021150 MsG0380013811.01.T02:intron 60.0%
! TGACAACGCTGCTGCTTCCC+AGG - Chr3:46021349-46021368 None:intergenic 60.0%
!! AGGTGGTGGAGGTAGGAAGC+AGG - Chr3:46013404-46013423 None:intergenic 60.0%
!! CCGGTTTGGGTATGGGTTCG+GGG + Chr3:46017290-46017309 MsG0380013811.01.T02:five_prime_UTR 60.0%
AAGCGGAGAGGTGGAGAGGG+TGG - Chr3:46013443-46013462 None:intergenic 65.0%
AATCCCATCCCCGTCCCCGA+CGG + Chr3:46016667-46016686 MsG0380013811.01.T02:five_prime_UTR 65.0%
AATCCGTCGGGGACGGGGAT+GGG - Chr3:46016673-46016692 None:intergenic 65.0%
ATCGGGTATGGGGACGGGGA+AGG - Chr3:46016595-46016614 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG - Chr3:46020724-46020743 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - Chr3:46020711-46020730 None:intergenic 65.0%
CGGGGATACCCGAATCCGTC+GGG - Chr3:46016685-46016704 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + Chr3:46020724-46020743 MsG0380013811.01.T02:intron 65.0%
GCATACGCAGGGTCCGGGAA+GGG - Chr3:46020725-46020744 None:intergenic 65.0%
GCGGGGATACCCGAATCCGT+CGG - Chr3:46016686-46016705 None:intergenic 65.0%
GGCACATTGGCGGGAGTCCT+TGG + Chr3:46019022-46019041 MsG0380013811.01.T02:five_prime_UTR 65.0%
GGGGATACCCGAATCCGTCG+GGG - Chr3:46016684-46016703 None:intergenic 65.0%
GTAGGCATGGCAATGGGGCG+GGG + Chr3:46016554-46016573 MsG0380013811.01.T02:five_prime_UTR 65.0%
TACCCGAATCCGTCGGGGAC+GGG - Chr3:46016679-46016698 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + Chr3:46020742-46020761 MsG0380013811.01.T02:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + Chr3:46020725-46020744 MsG0380013811.01.T02:intron 65.0%
! ATCCCCGTCCCCGACGGATT+CGG + Chr3:46016673-46016692 MsG0380013811.01.T02:five_prime_UTR 65.0%
!! TTGGTTCGGGCGGCTAACCG+CGG + Chr3:46017416-46017435 MsG0380013811.01.T02:five_prime_UTR 65.0%
ACCCGAATCCGTCGGGGACG+GGG - Chr3:46016678-46016697 None:intergenic 70.0%
CATGGCAATGGGGCGGGGTG+GGG + Chr3:46016559-46016578 MsG0380013811.01.T02:five_prime_UTR 70.0%
CGCATACGCAGGGTCCGGGA+AGG - Chr3:46020726-46020745 None:intergenic 70.0%
CGGAGAGGTGGAGAGGGTGG+AGG - Chr3:46013440-46013459 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG - Chr3:46020730-46020749 None:intergenic 70.0%
GAATCCGTCGGGGACGGGGA+TGG - Chr3:46016674-46016693 None:intergenic 70.0%
GCATGGCAATGGGGCGGGGT+GGG + Chr3:46016558-46016577 MsG0380013811.01.T02:five_prime_UTR 70.0%
GCGGGAGCTTCAGTGCACCG+GGG + Chr3:46020743-46020762 MsG0380013811.01.T02:intron 70.0%
GCTCCCGCATACGCAGGGTC+CGG - Chr3:46020731-46020750 None:intergenic 70.0%
GGGCGGCTAACCGCGGGTAT+GGG + Chr3:46017423-46017442 MsG0380013811.01.T02:five_prime_UTR 70.0%
GTGCGGAGATGGGGATGGGG+CGG - Chr3:46016705-46016724 None:intergenic 70.0%
GTGGAGAGGGTGGAGGAGCG+CGG - Chr3:46013433-46013452 None:intergenic 70.0%
TGCGGAGATGGGGATGGGGC+GGG - Chr3:46016704-46016723 None:intergenic 70.0%
! TCCCCGTCCCCGACGGATTC+GGG + Chr3:46016674-46016693 MsG0380013811.01.T02:five_prime_UTR 70.0%
! TGGTTCGGGCGGCTAACCGC+GGG + Chr3:46017417-46017436 MsG0380013811.01.T02:five_prime_UTR 70.0%
!! GCGGAGGAGGTGGTGGAGGT+AGG - Chr3:46013411-46013430 None:intergenic 70.0%
CAATGGGGCGGGGTGGGGAC+GGG + Chr3:46016564-46016583 MsG0380013811.01.T02:five_prime_UTR 75.0%
CGGGCGGCTAACCGCGGGTA+TGG + Chr3:46017422-46017441 MsG0380013811.01.T02:five_prime_UTR 75.0%
GCAATGGGGCGGGGTGGGGA+CGG + Chr3:46016563-46016582 MsG0380013811.01.T02:five_prime_UTR 75.0%
GCGGAGATGGGGATGGGGCG+GGG - Chr3:46016703-46016722 None:intergenic 75.0%
GGCATGGCAATGGGGCGGGG+TGG + Chr3:46016557-46016576 MsG0380013811.01.T02:five_prime_UTR 75.0%
! GAGAGGGTGGAGGAGCGCGG+CGG - Chr3:46013430-46013449 None:intergenic 75.0%
! GAGCGCGGCGGAGGAGGTGG+TGG - Chr3:46013418-46013437 None:intergenic 80.0%
!! AGGGTGGAGGAGCGCGGCGG+AGG - Chr3:46013427-46013446 None:intergenic 80.0%
!! CGCGGCGGAGGAGGTGGTGG+AGG - Chr3:46013415-46013434 None:intergenic 80.0%
!! GAGGAGCGCGGCGGAGGAGG+TGG - Chr3:46013421-46013440 None:intergenic 80.0%
!! GTGGAGGAGCGCGGCGGAGG+AGG - Chr3:46013424-46013443 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 46013256 46021924 46013256 ID=MsG0380013811.01;Name=MsG0380013811.01
Chr3 mRNA 46013256 46016557 46013256 ID=MsG0380013811.01.T01;Parent=MsG0380013811.01;Name=MsG0380013811.01.T01;_AED=0.49;_eAED=0.49;_QI=71|1|1|1|0.5|0.58|17|0|269
Chr3 exon 46016232 46016294 46016232 ID=MsG0380013811.01.T01:exon:6309;Parent=MsG0380013811.01.T01
Chr3 exon 46016444 46016557 46016444 ID=MsG0380013811.01.T01:exon:6310;Parent=MsG0380013811.01.T01
Chr3 five_prime_UTR 46013256 46013326 46013256 ID=MsG0380013811.01.T01:five_prime_utr;Parent=MsG0380013811.01.T01
Chr3 CDS 46013327 46013587 46013327 ID=MsG0380013811.01.T01:cds;Parent=MsG0380013811.01.T01
Chr3 CDS 46014045 46014225 46014045 ID=MsG0380013811.01.T01:cds;Parent=MsG0380013811.01.T01
Chr3 CDS 46014854 46014939 46014854 ID=MsG0380013811.01.T01:cds;Parent=MsG0380013811.01.T01
Chr3 CDS 46015548 46015652 46015548 ID=MsG0380013811.01.T01:cds;Parent=MsG0380013811.01.T01
Chr3 CDS 46016232 46016294 46016232 ID=MsG0380013811.01.T01:cds;Parent=MsG0380013811.01.T01
Chr3 CDS 46016444 46016557 46016444 ID=MsG0380013811.01.T01:cds;Parent=MsG0380013811.01.T01
Chr3 mRNA 46013256 46021924 46013256 ID=MsG0380013811.01.T02;Parent=MsG0380013811.01;Name=MsG0380013811.01.T02;_AED=0.50;_eAED=0.51;_QI=2732|0.85|0.86|1|0.64|0.73|15|0|157
Chr3 exon 46016232 46016330 46016232 ID=MsG0380013811.01.T02:exon:6311;Parent=MsG0380013811.01.T02
Chr3 exon 46016444 46017863 46016444 ID=MsG0380013811.01.T02:exon:6312;Parent=MsG0380013811.01.T02
Chr3 exon 46018412 46018532 46018412 ID=MsG0380013811.01.T02:exon:6315;Parent=MsG0380013811.01.T02
Chr3 exon 46018956 46019079 46018956 ID=MsG0380013811.01.T02:exon:6317;Parent=MsG0380013811.01.T02
Chr3 exon 46019765 46019864 46019765 ID=MsG0380013811.01.T02:exon:6318;Parent=MsG0380013811.01.T02
Chr3 exon 46020449 46020565 46020449 ID=MsG0380013811.01.T02:exon:6319;Parent=MsG0380013811.01.T02
Chr3 exon 46020643 46020687 46020643 ID=MsG0380013811.01.T02:exon:6320;Parent=MsG0380013811.01.T02
Chr3 exon 46021697 46021924 46021697 ID=MsG0380013811.01.T02:exon:6321;Parent=MsG0380013811.01.T02
Chr3 five_prime_UTR 46013256 46013587 46013256 ID=MsG0380013811.01.T02:five_prime_utr;Parent=MsG0380013811.01.T02
Chr3 five_prime_UTR 46014045 46014225 46014045 ID=MsG0380013811.01.T02:five_prime_utr;Parent=MsG0380013811.01.T02
Chr3 five_prime_UTR 46014854 46014939 46014854 ID=MsG0380013811.01.T02:five_prime_utr;Parent=MsG0380013811.01.T02
Chr3 five_prime_UTR 46015548 46015652 46015548 ID=MsG0380013811.01.T02:five_prime_utr;Parent=MsG0380013811.01.T02
Chr3 five_prime_UTR 46016232 46016330 46016232 ID=MsG0380013811.01.T02:five_prime_utr;Parent=MsG0380013811.01.T02
Chr3 five_prime_UTR 46016444 46017863 46016444 ID=MsG0380013811.01.T02:five_prime_utr;Parent=MsG0380013811.01.T02
Chr3 five_prime_UTR 46018023 46018098 46018023 ID=MsG0380013811.01.T02:five_prime_utr;Parent=MsG0380013811.01.T02
Chr3 five_prime_UTR 46018204 46018277 46018204 ID=MsG0380013811.01.T02:five_prime_utr;Parent=MsG0380013811.01.T02
Chr3 five_prime_UTR 46018412 46018532 46018412 ID=MsG0380013811.01.T02:five_prime_utr;Parent=MsG0380013811.01.T02
Chr3 five_prime_UTR 46018753 46018850 46018753 ID=MsG0380013811.01.T02:five_prime_utr;Parent=MsG0380013811.01.T02
Chr3 five_prime_UTR 46018956 46019079 46018956 ID=MsG0380013811.01.T02:five_prime_utr;Parent=MsG0380013811.01.T02
Chr3 five_prime_UTR 46019765 46019780 46019765 ID=MsG0380013811.01.T02:five_prime_utr;Parent=MsG0380013811.01.T02
Chr3 CDS 46019781 46019864 46019781 ID=MsG0380013811.01.T02:cds;Parent=MsG0380013811.01.T02
Chr3 CDS 46020449 46020565 46020449 ID=MsG0380013811.01.T02:cds;Parent=MsG0380013811.01.T02
Chr3 CDS 46020643 46020687 46020643 ID=MsG0380013811.01.T02:cds;Parent=MsG0380013811.01.T02
Chr3 CDS 46021697 46021924 46021697 ID=MsG0380013811.01.T02:cds;Parent=MsG0380013811.01.T02
Chr3 mRNA 46017301 46019097 46017301 ID=MsG0380013811.01.T03;Parent=MsG0380013811.01;Name=MsG0380013811.01.T03;_AED=0.50;_eAED=0.66;_QI=0|0.6|0.5|1|0.8|0.83|6|0|253
Chr3 exon 46017301 46017413 46017301 ID=MsG0380013811.01.T03:exon:6322;Parent=MsG0380013811.01.T03
Chr3 exon 46018412 46018670 46018412 ID=MsG0380013811.01.T03:exon:6323;Parent=MsG0380013811.01.T03
Chr3 exon 46018956 46019097 46018956 ID=MsG0380013811.01.T03:exon:6324;Parent=MsG0380013811.01.T03
Chr3 CDS 46017301 46017413 46017301 ID=MsG0380013811.01.T03:cds;Parent=MsG0380013811.01.T03
Chr3 CDS 46018023 46018098 46018023 ID=MsG0380013811.01.T03:cds;Parent=MsG0380013811.01.T03
Chr3 CDS 46018204 46018277 46018204 ID=MsG0380013811.01.T03:cds;Parent=MsG0380013811.01.T03
Chr3 CDS 46018412 46018670 46018412 ID=MsG0380013811.01.T03:cds;Parent=MsG0380013811.01.T03
Chr3 CDS 46018753 46018850 46018753 ID=MsG0380013811.01.T03:cds;Parent=MsG0380013811.01.T03
Chr3 CDS 46018956 46019097 46018956 ID=MsG0380013811.01.T03:cds;Parent=MsG0380013811.01.T03
Gene Sequence

>MsG0380013811.01.T01

ATGTCAACGACTACAACAACGGAATCGAAGATGCACGACGCTGCACGGAACCGTTTATCCACCCTCACAGCTCACCTGCTTCCTACCTCCACCACCTCCTCCGCCGCGCTCCTCCACCCTCTCCACCTCTCCGCTTCTTCTGGGATCTCTCCACCGTCCAATGTCAAGGGAACGCTCACTGTTGTTGATGAACGTACTGGGAAGAAGTATAGTATTGAAGTCTCTCCTGATGGCACCGTCAAAGCCAATGATTTCAAGAAGATATCAGCTGGGAAGAATGACAAGGGACTCAAACTTTATGACCCTGGATATTTAAACACTGCTCCTGTGCGATCAACAATTTCTTATATTGATGGTGATGAGGGGATCCTTAGATATAGAGGATACCCAATTGAGGAGTTAGCTGAGAAAAGCACCTTTCCGGAAGTGTCATATCTCATATTGTATGGAAATTTGCCTTCTGCAAGTCAGTTACAAGAATGGGAGTTTGCTATATCTCAACACTCAGCTTTACCACAGGGTGTTTTGGATCTCATACAAGCTATGCCTCAAGATGCACATCCTTTGGGTGTACTTGTTAATGCTCTGAGTGCTTTATCCATTTTTCATCCTGATGCAAATCCTGCTCTCAGAGGTCTTGATATCTACAACTCAAAGCAAGTGAGAGACAAGCAAATAGTGCCGATTATCGGAAAGATAACAACAATTGCTGCTGCAATTAATCTTAGATTGGGAGGAAGGCCACCTGTTCTTCCATCTAACAAACTTTCTTACACGGAGAACTTCCTTTACATGCTTGATTCTCTGTAG

>MsG0380013811.01.T02

ATGGCAGTCAAAGTTGAGGATTGTCAATTACTTCCTTTTGATTACAGGAAGGATCCATCACTAAAATATGCATCAATATCCCTGTTCTCAGTAATGGAAGTGGGAGCAGCGGACCCTTATACAACAAATCCAGTTCCAATTGATGGTTCAGTTCTATATGATCAAGACAAGCATGTTTCAACTGCAGTTTGGGAAGGACAGGTCACGGGTTCAAGTCCTGGAAACAACCTCTTGTGTAAAAACAGGTGTTGGAGTTACTTTCACCTAAATGTTGGACGGCCAAAGCTTAATCTTGAAATGATGCATGATCGATTTCCCTTTGTGCTTAGATGGAAAGGAAAACAAAGTGGCCCAACTGCAAATCGTGATGTAGTTTTTTATCGGAAGGCTTTGGATTCTCTAAAACCATGTGATGTAAGTCGTATTCTCATTTCTATGTTTAATGTTAATGATAATGTTCTATATATCCTTTGA

>MsG0380013811.01.T03

ATGGGTTCGGGGTGGGTACCTATATACCCGTTACCCGTCCCATACCCATGTTTTGAAATAGGGGAAAACCCATACCCAAACCCAGTCAAAACAGGGAAAACCCGTCAAATTGGTGGTGTTGATGTATACACTGCTATTGCTGGCGGTGTTGGAGCTCTATATGGACCTCTTCATGGTGGAGCTAACGAGGCTGTCCTCAAAATGCTGAGTGAAATTGGAAGTGTTGATAACATTCCAGAGTTCATTGAAGGTGTTAAAGCCAGGAAACGAAAGCTCAGTGGTTTTGGACATCGTGTGTACAAAAACTACGATCCTAGAGCAAAGGTCTTAAAAAAATTGACCGAGGAAGTGTTTTCCATTGTTGGCCGGGATCCTTTGATTGAGGTGTTTATCCATTTTGTATTCCCTGTCTATGTTACATCTGTTACATATTTTTTTGTTGAACTGCATGTTTGTTACATATTCCTTAAGCTGGATGTAGTGTTCATGAGGCAATTGATCAATGATCAGGACTATGAATTCGTAGTTGTTGCCTTGGAGAAGATTGCTCTGTCTGATGAGTATTTTGTCAAGAGGAAGCTATATCCAAATGTTGACTTCTACTCCGGATTAATATATAGGGCTATGGGATTTCCACCTGAATTTTTCACTATTTTATTTGCTATCCCCCGTATGGCTGGATACTTGGCACATTGGCGGGAGTCCTTGGATGATCCGGATACAAAGATTATGAGACCTCAACAGGTTATTTCCTTTCTTTAA
Protein sequence

>MsG0380013811.01.T01

MSTTTTTESKMHDAARNRLSTLTAHLLPTSTTSSAALLHPLHLSASSGISPPSNVKGTLTVVDERTGKKYSIEVSPDGTVKANDFKKISAGKNDKGLKLYDPGYLNTAPVRSTISYIDGDEGILRYRGYPIEELAEKSTFPEVSYLILYGNLPSASQLQEWEFAISQHSALPQGVLDLIQAMPQDAHPLGVLVNALSALSIFHPDANPALRGLDIYNSKQVRDKQIVPIIGKITTIAAAINLRLGGRPPVLPSNKLSYTENFLYMLDSL*

>MsG0380013811.01.T02

MAVKVEDCQLLPFDYRKDPSLKYASISLFSVMEVGAADPYTTNPVPIDGSVLYDQDKHVSTAVWEGQVTGSSPGNNLLCKNRCWSYFHLNVGRPKLNLEMMHDRFPFVLRWKGKQSGPTANRDVVFYRKALDSLKPCDVSRILISMFNVNDNVLYIL*

>MsG0380013811.01.T03

MGSGWVPIYPLPVPYPCFEIGENPYPNPVKTGKTRQIGGVDVYTAIAGGVGALYGPLHGGANEAVLKMLSEIGSVDNIPEFIEGVKARKRKLSGFGHRVYKNYDPRAKVLKKLTEEVFSIVGRDPLIEVFIHFVFPVYVTSVTYFFVELHVCYIFLKLDVVFMRQLINDQDYEFVVVALEKIALSDEYFVKRKLYPNVDFYSGLIYRAMGFPPEFFTILFAIPRMAGYLAHWRESLDDPDTKIMRPQQVISFL*