AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380013794.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013794.01.T01 MTR_3g452790 50.314 318 111 8 1 302 429 715 5.65e-82 264
MsG0380013794.01.T01 MTR_3g449240 48.780 328 120 6 1 312 507 802 9.89e-80 259
MsG0380013794.01.T01 MTR_3g048440 49.057 318 115 7 1 302 572 858 4.86e-78 256
MsG0380013794.01.T01 MTR_3g452760 48.615 325 115 8 1 307 484 774 5.17e-78 255
MsG0380013794.01.T01 MTR_3g048860 47.319 317 118 7 1 302 477 759 4.13e-75 246
MsG0380013794.01.T01 MTR_3g048740 47.799 318 105 7 1 302 469 741 6.34e-75 246
MsG0380013794.01.T01 MTR_3g048910 47.826 322 113 7 1 302 498 784 1.19e-72 240
MsG0380013794.01.T01 MTR_3g452730 47.664 321 118 9 1 303 488 776 1.03e-71 238
MsG0380013794.01.T01 MTR_3g452900 46.708 319 117 7 1 302 503 785 4.53e-71 236
MsG0380013794.01.T01 MTR_3g452750 45.912 318 125 8 1 302 595 881 3.06e-70 235
MsG0380013794.01.T01 MTR_3g452750 72.109 147 41 0 1 147 352 498 1.04e-61 212
MsG0380013794.01.T01 MTR_3g451890 46.082 319 123 9 1 302 132 418 5.45e-70 225
MsG0380013794.01.T01 MTR_0274s0010 47.869 305 100 9 1 299 306 557 1.15e-69 228
MsG0380013794.01.T01 MTR_3g048785 46.395 319 119 8 1 302 509 792 4.13e-69 231
MsG0380013794.01.T01 MTR_3g452210 46.688 317 120 7 3 302 386 670 8.71e-69 228
MsG0380013794.01.T01 MTR_3g451090 46.688 317 120 7 3 302 386 670 8.71e-69 228
MsG0380013794.01.T01 MTR_3g048590 46.541 318 123 8 1 302 468 754 1.07e-68 229
MsG0380013794.01.T01 MTR_0640s0020 46.605 324 114 9 1 302 502 788 1.75e-68 229
MsG0380013794.01.T01 MTR_3g452850 46.250 320 121 7 1 302 380 666 4.27e-68 226
MsG0380013794.01.T01 MTR_6g038190 47.213 305 117 6 1 305 339 599 2.76e-67 223
MsG0380013794.01.T01 MTR_3g048760 47.170 318 118 9 1 302 356 639 9.19e-67 222
MsG0380013794.01.T01 MTR_3g041560 45.171 321 123 7 1 302 476 762 4.12e-66 223
MsG0380013794.01.T01 MTR_3g452770 74.830 147 37 0 1 147 498 644 7.12e-66 222
MsG0380013794.01.T01 MTR_3g041560 45.171 321 123 7 1 302 500 786 7.37e-66 222
MsG0380013794.01.T01 MTR_3g452880 45.098 306 114 8 17 302 4 275 7.68e-66 209
MsG0380013794.01.T01 MTR_3g463540 75.510 147 36 0 1 147 476 622 4.18e-64 217
MsG0380013794.01.T01 MTR_0648s0020 71.895 153 32 2 1 147 274 421 1.36e-62 208
MsG0380013794.01.T01 MTR_4g011310 43.692 325 127 10 1 302 438 729 1.39e-61 210
MsG0380013794.01.T01 MTR_3g048470 43.252 326 116 7 1 312 285 555 1.62e-60 204
MsG0380013794.01.T01 MTR_3g452800 42.136 337 126 7 3 312 480 774 1.25e-59 205
MsG0380013794.01.T01 MTR_3g452980 74.615 130 33 0 1 130 52 181 3.14e-58 191
MsG0380013794.01.T01 MTR_8g023445 68.182 154 42 3 1 147 521 674 1.00e-53 191
MsG0380013794.01.T01 MTR_3g048920 92.473 93 7 0 149 241 87 179 1.90e-53 184
MsG0380013794.01.T01 MTR_3g452970 39.628 323 139 9 1 302 219 506 5.48e-52 180
MsG0380013794.01.T01 MTR_5g091930 81.250 96 18 0 149 244 81 176 1.40e-47 168
MsG0380013794.01.T01 MTR_3g082130 35.974 303 149 6 1 289 584 855 2.69e-44 163
MsG0380013794.01.T01 MTR_0274s0050 39.648 227 90 7 78 302 8 189 7.06e-36 129
MsG0380013794.01.T01 MTR_8g046150 32.765 293 147 8 1 287 463 711 1.76e-31 125
MsG0380013794.01.T01 MTR_0271s0040 38.034 234 96 8 91 307 1 202 5.42e-29 112
MsG0380013794.01.T01 MTR_8g041190 30.341 323 157 10 1 291 542 828 2.88e-28 116
MsG0380013794.01.T01 MTR_8g040925 30.341 323 157 10 1 291 542 828 2.88e-28 116
MsG0380013794.01.T01 MTR_0087s0040 27.793 367 167 10 1 308 661 988 7.75e-26 109
MsG0380013794.01.T01 MTR_3g050710 41.611 149 69 2 1 147 235 367 3.29e-25 105
MsG0380013794.01.T01 MTR_2g055690 39.877 163 82 4 1 147 738 900 5.95e-24 103
MsG0380013794.01.T01 MTR_0087s0070 25.937 347 177 8 2 302 401 713 1.48e-23 102
MsG0380013794.01.T01 MTR_0087s0030 27.222 360 166 11 1 302 330 651 1.89e-23 102
MsG0380013794.01.T01 MTR_0061s0050 28.659 328 162 11 1 289 705 999 5.65e-23 100
MsG0380013794.01.T01 MTR_6g016195 27.746 346 176 14 1 302 744 1059 7.40e-23 100
MsG0380013794.01.T01 MTR_0017s0270 32.645 242 111 7 1 221 122 332 1.20e-22 97.4
MsG0380013794.01.T01 MTR_8g041150 38.365 159 84 3 1 147 539 695 1.40e-22 99.8
MsG0380013794.01.T01 MTR_6g016200 27.035 344 178 13 1 301 116 429 2.32e-22 97.8
MsG0380013794.01.T01 MTR_6g016130 28.286 350 168 16 1 302 547 861 3.11e-22 98.6
MsG0380013794.01.T01 MTR_6g016140 26.957 345 179 14 1 302 622 936 4.53e-22 98.2
MsG0380013794.01.T01 MTR_6g034470 34.286 175 88 5 1 148 795 969 5.60e-22 97.8
MsG0380013794.01.T01 MTR_0017s0230 39.645 169 80 5 1 148 670 837 8.38e-22 97.4
MsG0380013794.01.T01 MTR_8g041100 38.509 161 83 3 1 147 588 746 1.13e-21 97.1
MsG0380013794.01.T01 MTR_6g038940 27.515 338 167 10 1 295 810 1112 1.98e-21 96.3
MsG0380013794.01.T01 MTR_0087s0020 26.667 330 173 12 1 302 620 908 2.58e-21 95.9
MsG0380013794.01.T01 MTR_6g034410 34.659 176 86 5 1 148 775 949 3.10e-21 95.9
MsG0380013794.01.T01 MTR_2g450870 36.842 171 91 5 1 154 615 785 4.06e-21 95.1
MsG0380013794.01.T01 MTR_3g031520 28.354 328 166 10 1 289 662 959 4.98e-21 95.1
MsG0380013794.01.T01 MTR_1g080720 37.647 170 83 5 1 148 453 621 9.06e-21 94.0
MsG0380013794.01.T01 MTR_5g085920 26.393 341 182 10 1 304 829 1137 1.47e-20 93.6
MsG0380013794.01.T01 MTR_6g038670 27.139 339 167 12 1 295 812 1114 1.79e-20 93.6
MsG0380013794.01.T01 MTR_5g085910 26.168 321 178 9 1 305 822 1099 2.68e-20 92.8
MsG0380013794.01.T01 MTR_6g038730 28.655 342 158 14 1 295 843 1145 3.10e-20 92.8
MsG0380013794.01.T01 MTR_6g051800 27.476 313 168 9 1 294 638 910 5.68e-20 92.0
MsG0380013794.01.T01 MTR_6g016050 32.749 171 91 3 1 147 883 1053 5.77e-20 92.0
MsG0380013794.01.T01 MTR_6g038790 26.567 335 168 11 1 295 317 613 6.93e-20 91.3
MsG0380013794.01.T01 MTR_6g038790 26.567 335 168 11 1 295 327 623 6.95e-20 91.3
MsG0380013794.01.T01 MTR_0087s0050 34.320 169 83 5 1 143 629 795 1.18e-19 90.9
MsG0380013794.01.T01 MTR_6g039180 26.627 338 168 11 2 295 877 1178 1.55e-19 90.5
MsG0380013794.01.T01 MTR_6g039180 35.374 147 88 2 2 146 805 946 3.67e-12 68.2
MsG0380013794.01.T01 MTR_5g069580 27.844 334 162 13 1 289 594 893 1.96e-19 90.1
MsG0380013794.01.T01 MTR_5g069580 34.667 150 88 3 1 147 138 280 1.32e-12 69.3
MsG0380013794.01.T01 MTR_5g069580 36.429 140 79 3 1 137 186 318 2.17e-12 68.9
MsG0380013794.01.T01 MTR_5g069580 34.000 150 89 3 1 147 162 304 2.77e-12 68.6
MsG0380013794.01.T01 MTR_5g069580 34.677 124 73 2 25 147 116 232 2.82e-11 65.5
MsG0380013794.01.T01 MTR_4g018970 25.352 355 178 13 1 302 605 925 2.07e-19 90.1
MsG0380013794.01.T01 MTR_5g085970 25.970 335 182 9 2 302 681 983 3.05e-19 89.7
MsG0380013794.01.T01 MTR_1g047190 27.492 331 165 12 1 289 179 476 3.17e-19 89.0
MsG0380013794.01.T01 MTR_2g046780 35.714 154 83 4 1 138 218 371 5.17e-19 88.2
MsG0380013794.01.T01 MTR_6g037750 28.363 342 156 14 1 295 898 1197 9.46e-19 88.2
MsG0380013794.01.T01 MTR_6g037750 31.214 173 90 5 1 166 119 269 7.60e-12 67.4
MsG0380013794.01.T01 MTR_7g014430 26.970 330 163 11 1 291 619 909 1.27e-18 87.8
MsG0380013794.01.T01 MTR_6g038980 28.116 345 158 15 3 295 489 795 1.68e-18 87.4
MsG0380013794.01.T01 MTR_5g081920 27.245 323 173 9 1 299 394 678 1.75e-18 87.0
MsG0380013794.01.T01 MTR_4g016780 37.500 160 87 4 1 147 395 554 2.41e-18 86.7
MsG0380013794.01.T01 MTR_6g034450 34.437 151 82 3 1 148 522 658 4.68e-18 85.9
MsG0380013794.01.T01 MTR_7g083800 35.811 148 62 3 17 147 60 191 5.15e-18 81.6
MsG0380013794.01.T01 MTR_2g017480 36.646 161 87 4 1 147 670 829 8.57e-18 85.5
MsG0380013794.01.T01 MTR_7g098240 32.143 168 93 3 1 147 316 483 1.77e-17 84.0
MsG0380013794.01.T01 MTR_2g017450 35.976 164 88 3 1 147 591 754 2.10e-17 84.0
MsG0380013794.01.T01 MTR_2g064580 29.388 245 121 8 1 223 266 480 2.54e-17 83.6
MsG0380013794.01.T01 MTR_4g016910 34.595 185 83 5 1 147 380 564 2.83e-17 83.6
MsG0380013794.01.T01 MTR_2g055360 34.568 162 87 4 1 147 482 639 2.90e-17 83.6
MsG0380013794.01.T01 MTR_2g017470 26.970 330 186 12 1 299 669 974 2.93e-17 83.6
MsG0380013794.01.T01 MTR_6g039110 25.949 316 158 10 20 295 801 1080 4.39e-17 83.2
MsG0380013794.01.T01 MTR_1g098980 36.424 151 68 3 1 148 660 785 8.34e-17 82.4
MsG0380013794.01.T01 MTR_6g038910 26.471 340 168 13 1 295 765 1067 2.22e-16 81.3
MsG0380013794.01.T01 MTR_4g015960 34.054 185 84 5 1 147 299 483 2.98e-16 80.5
MsG0380013794.01.T01 MTR_4g015960 29.375 160 80 3 1 158 204 332 3.30e-11 65.1
MsG0380013794.01.T01 MTR_1g101250 31.383 188 88 5 1 147 823 1010 3.75e-16 80.5
MsG0380013794.01.T01 MTR_1g101250 29.870 154 75 3 2 154 564 685 1.04e-11 66.6
MsG0380013794.01.T01 MTR_1g101250 33.117 154 86 5 1 147 583 726 2.64e-11 65.5
MsG0380013794.01.T01 MTR_5g047390 27.089 347 154 14 1 288 724 1030 5.27e-16 80.1
MsG0380013794.01.T01 MTR_4g015930 31.383 188 88 4 1 147 392 579 7.06e-16 79.3
MsG0380013794.01.T01 MTR_4g015930 31.383 188 88 4 1 147 392 579 7.47e-16 79.3
MsG0380013794.01.T01 MTR_4g015930 31.383 188 88 4 1 147 482 669 8.40e-16 79.3
MsG0380013794.01.T01 MTR_4g015930 31.383 188 88 4 1 147 480 667 8.54e-16 79.3
MsG0380013794.01.T01 MTR_4g015930 31.383 188 88 4 1 147 700 887 8.95e-16 79.3
MsG0380013794.01.T01 MTR_4g015930 31.383 188 88 4 1 147 482 669 9.11e-16 79.0
MsG0380013794.01.T01 MTR_4g015930 31.383 188 88 4 1 147 700 887 1.13e-15 79.0
MsG0380013794.01.T01 MTR_4g015930 31.383 188 88 4 1 147 700 887 1.15e-15 79.0
MsG0380013794.01.T01 MTR_6g038760 24.629 337 194 11 1 293 80 400 1.44e-15 77.8
MsG0380013794.01.T01 MTR_4g040360 31.325 166 91 4 1 147 733 894 1.59e-15 78.6
MsG0380013794.01.T01 MTR_2g069880 29.730 222 107 7 21 223 276 467 1.87e-15 77.8
MsG0380013794.01.T01 MTR_1g079520 34.132 167 90 4 1 147 101 267 3.13e-15 77.4
MsG0380013794.01.T01 MTR_1g079520 28.959 221 138 6 1 216 404 610 1.61e-12 69.3
MsG0380013794.01.T01 MTR_1g079520 31.176 170 101 5 1 154 221 390 8.99e-12 67.0
MsG0380013794.01.T01 MTR_8g089000 36.538 156 83 4 6 147 586 739 4.05e-15 77.0
MsG0380013794.01.T01 MTR_7g098610 34.000 150 91 2 1 148 153 296 4.53e-15 77.0
MsG0380013794.01.T01 MTR_4g011860 34.132 167 90 3 1 148 770 935 1.23e-14 75.9
MsG0380013794.01.T01 MTR_6g088770 29.834 181 100 4 1 171 139 302 1.67e-14 75.1
MsG0380013794.01.T01 MTR_4g094790 32.026 153 89 3 1 147 686 829 2.08e-14 75.1
MsG0380013794.01.T01 MTR_4g094790 32.168 143 80 5 1 137 567 698 1.10e-11 66.6
MsG0380013794.01.T01 MTR_4g029710 31.410 156 82 5 6 149 114 256 2.66e-14 74.7
MsG0380013794.01.T01 MTR_5g021670 33.929 168 85 4 1 145 556 720 3.15e-14 74.7
MsG0380013794.01.T01 MTR_5g021670 32.192 146 87 5 6 147 393 530 3.13e-11 65.5
MsG0380013794.01.T01 MTR_5g021670 29.333 150 96 4 1 147 412 554 9.06e-11 63.9
MsG0380013794.01.T01 MTR_1g080440 30.968 155 87 3 1 147 201 343 4.05e-14 74.3
MsG0380013794.01.T01 MTR_2g017495 31.884 138 69 3 6 143 554 666 4.15e-14 73.9
MsG0380013794.01.T01 MTR_2g437730 33.333 150 91 3 1 147 578 721 4.35e-14 73.9
MsG0380013794.01.T01 MTR_4g105520 31.515 165 94 4 1 146 561 725 4.83e-14 73.9
MsG0380013794.01.T01 MTR_7g096980 30.000 170 94 4 1 147 636 803 5.57e-14 73.9
MsG0380013794.01.T01 MTR_4g032320 31.788 151 91 3 1 147 312 454 6.32e-14 73.6
MsG0380013794.01.T01 MTR_4g032320 33.333 144 88 3 1 142 360 497 1.06e-11 66.6
MsG0380013794.01.T01 MTR_4g040420 34.194 155 87 3 1 140 726 880 6.87e-14 73.6
MsG0380013794.01.T01 MTR_4g037720 32.317 164 90 3 1 143 382 545 9.15e-14 73.2
MsG0380013794.01.T01 MTR_4g037720 28.141 199 98 5 1 155 238 435 3.41e-11 65.1
MsG0380013794.01.T01 MTR_2g040910 34.437 151 84 5 3 147 387 528 9.75e-14 73.2
MsG0380013794.01.T01 MTR_2g040910 30.065 153 94 4 1 148 433 577 3.47e-11 65.1
MsG0380013794.01.T01 MTR_8g469830 32.317 164 91 6 3 146 232 395 1.20e-13 72.8
MsG0380013794.01.T01 MTR_7g009940 33.793 145 84 4 1 141 94 230 1.27e-13 72.4
MsG0380013794.01.T01 MTR_1g096260 34.307 137 82 2 1 137 285 413 1.35e-13 72.4
MsG0380013794.01.T01 MTR_1g096270 34.307 137 82 2 1 137 408 536 1.41e-13 72.4
MsG0380013794.01.T01 MTR_1g096270 32.394 142 82 4 3 140 172 303 3.08e-11 65.1
MsG0380013794.01.T01 MTR_3g109820 34.328 134 74 2 19 148 150 273 1.47e-13 72.4
MsG0380013794.01.T01 MTR_4g040330 33.548 155 88 3 1 140 734 888 2.31e-13 72.0
MsG0380013794.01.T01 MTR_7g067530 32.000 150 71 3 1 148 409 529 2.54e-13 71.6
MsG0380013794.01.T01 MTR_7g067530 28.302 212 124 8 10 215 105 294 2.57e-11 65.5
MsG0380013794.01.T01 MTR_7g067530 30.864 162 91 4 1 141 137 298 8.72e-11 63.9
MsG0380013794.01.T01 MTR_2g017805 27.914 326 165 15 1 293 102 390 2.65e-13 70.9
MsG0380013794.01.T01 MTR_5g086810 36.029 136 77 3 8 140 283 411 3.50e-13 71.2
MsG0380013794.01.T01 MTR_1g099250 35.000 140 74 5 1 137 71 196 3.70e-13 68.9
MsG0380013794.01.T01 MTR_0400s0040 34.000 150 87 4 1 146 610 751 4.79e-13 70.9
MsG0380013794.01.T01 MTR_0400s0040 32.215 149 81 4 3 143 492 628 5.17e-12 67.8
MsG0380013794.01.T01 MTR_0400s0040 34.167 120 71 2 23 141 106 218 5.53e-11 64.7
MsG0380013794.01.T01 MTR_0365s0030 34.000 150 87 4 1 146 610 751 4.79e-13 70.9
MsG0380013794.01.T01 MTR_0365s0030 32.215 149 81 4 3 143 492 628 5.17e-12 67.8
MsG0380013794.01.T01 MTR_0365s0030 34.167 120 71 2 23 141 106 218 5.53e-11 64.7
MsG0380013794.01.T01 MTR_5g025950 30.625 160 80 3 1 158 433 563 5.16e-13 70.9
MsG0380013794.01.T01 MTR_5g025950 32.886 149 87 4 3 146 387 527 6.46e-13 70.5
MsG0380013794.01.T01 MTR_7g066590 29.448 163 95 4 1 143 392 554 5.26e-13 70.5
MsG0380013794.01.T01 MTR_7g066590 31.293 147 82 1 20 147 509 655 1.07e-12 69.7
MsG0380013794.01.T01 MTR_6g088790 36.691 139 74 5 6 140 422 550 5.94e-13 70.5
MsG0380013794.01.T01 MTR_5g096530 32.867 143 88 3 1 141 325 461 5.95e-13 70.5
MsG0380013794.01.T01 MTR_4g037015 30.488 164 93 3 1 143 304 467 6.03e-13 70.5
MsG0380013794.01.T01 MTR_4g037015 28.643 199 97 5 1 155 160 357 4.64e-12 67.8
MsG0380013794.01.T01 MTR_5g025890 28.144 167 99 3 3 148 384 550 6.23e-13 70.5
MsG0380013794.01.T01 MTR_3g070220 31.737 167 93 5 3 148 377 543 7.26e-13 70.5
MsG0380013794.01.T01 MTR_5g026160 34.667 150 87 5 3 148 362 504 7.71e-13 70.1
MsG0380013794.01.T01 MTR_7g028432 30.488 164 93 3 1 143 380 543 7.84e-13 70.1
MsG0380013794.01.T01 MTR_7g028432 28.643 199 97 5 1 155 236 433 6.47e-12 67.4
MsG0380013794.01.T01 MTR_5g024450 31.138 167 94 4 3 148 392 558 8.00e-13 70.1
MsG0380013794.01.T01 MTR_7g022160 32.215 149 69 3 1 147 354 472 8.60e-13 70.1
MsG0380013794.01.T01 MTR_2g070020 30.519 154 91 4 1 148 440 583 8.67e-13 70.1
MsG0380013794.01.T01 MTR_2g070020 31.847 157 84 5 1 147 512 655 2.81e-11 65.5
MsG0380013794.01.T01 MTR_2g070020 30.822 146 93 3 3 146 466 605 4.55e-11 64.7
MsG0380013794.01.T01 MTR_3g095100 30.814 172 106 4 1 171 272 431 8.80e-13 70.1
MsG0380013794.01.T01 MTR_4g014070 29.293 198 106 7 1 175 205 391 1.05e-12 69.7
MsG0380013794.01.T01 MTR_1g039220 31.757 148 69 3 1 146 611 728 1.19e-12 69.7
MsG0380013794.01.T01 MTR_1g039220 29.487 156 88 4 1 147 179 321 1.48e-12 69.3
MsG0380013794.01.T01 MTR_1g039220 34.899 149 89 3 1 147 323 465 2.82e-12 68.6
MsG0380013794.01.T01 MTR_1g039220 33.548 155 83 3 1 147 227 369 3.26e-12 68.2
MsG0380013794.01.T01 MTR_1g039220 33.333 144 88 3 6 147 280 417 3.52e-11 65.1
MsG0380013794.01.T01 MTR_1g039220 31.788 151 83 5 1 143 467 605 4.60e-11 64.7
MsG0380013794.01.T01 MTR_7g007560 30.201 149 86 3 18 148 89 237 1.33e-12 69.3
MsG0380013794.01.T01 MTR_7g073290 30.323 155 88 3 1 147 158 300 1.35e-12 69.3
MsG0380013794.01.T01 MTR_7g073290 32.168 143 87 5 1 140 206 341 6.02e-11 64.3
MsG0380013794.01.T01 MTR_2g016200 33.813 139 84 2 1 137 438 570 1.36e-12 69.3
MsG0380013794.01.T01 MTR_2g449790 32.667 150 91 4 1 147 192 334 1.49e-12 69.3
MsG0380013794.01.T01 MTR_1g040555 32.168 143 65 2 6 146 391 503 1.62e-12 69.3
MsG0380013794.01.T01 MTR_8g047220 32.667 150 91 3 1 147 166 308 1.70e-12 69.3
MsG0380013794.01.T01 MTR_1g039240 34.247 146 81 4 1 141 206 341 1.86e-12 68.9
MsG0380013794.01.T01 MTR_1g039240 28.859 149 98 3 1 147 301 443 1.88e-11 65.9
MsG0380013794.01.T01 MTR_1g039240 29.697 165 97 5 1 159 637 788 2.18e-11 65.9
MsG0380013794.01.T01 MTR_1g039240 30.723 166 95 4 1 146 589 754 2.24e-11 65.9
MsG0380013794.01.T01 MTR_2g073560 29.213 178 104 4 6 180 167 325 2.08e-12 68.9
MsG0380013794.01.T01 MTR_5g090100 30.986 142 90 4 1 140 226 361 2.16e-12 68.9
MsG0380013794.01.T01 MTR_5g087090 36.429 140 81 3 3 140 278 411 2.98e-12 68.6
MsG0380013794.01.T01 MTR_2g072610 35.374 147 86 4 1 144 381 521 3.07e-12 68.2
MsG0380013794.01.T01 MTR_0400s0030 34.459 148 81 5 6 147 328 465 3.18e-12 68.2
MsG0380013794.01.T01 MTR_0365s0020 34.459 148 81 5 6 147 328 465 3.18e-12 68.2
MsG0380013794.01.T01 MTR_4g035200 32.278 158 97 5 1 154 103 254 3.22e-12 68.2
MsG0380013794.01.T01 MTR_6g068970 37.681 138 73 5 3 137 486 613 3.27e-12 68.2
MsG0380013794.01.T01 MTR_7g081720 37.419 155 76 6 1 146 230 372 3.27e-12 68.2
MsG0380013794.01.T01 MTR_7g081720 33.103 145 81 4 1 139 519 653 8.57e-11 63.9
MsG0380013794.01.T01 MTR_8g047210 32.000 150 92 3 1 147 151 293 3.74e-12 68.2
MsG0380013794.01.T01 MTR_8g047210 34.507 142 79 4 1 137 175 307 1.75e-11 65.9
MsG0380013794.01.T01 MTR_1g039310 31.928 166 93 4 1 146 586 751 4.18e-12 68.2
MsG0380013794.01.T01 MTR_3g093930 32.571 175 101 7 1 169 407 570 4.50e-12 67.8
MsG0380013794.01.T01 MTR_3g093930 31.507 146 90 4 1 141 307 447 1.87e-11 65.9
MsG0380013794.01.T01 MTR_6g036870 30.345 145 94 2 6 148 377 516 4.78e-12 67.8
MsG0380013794.01.T01 MTR_6g016210 25.664 339 183 12 1 302 672 978 5.01e-12 67.8
MsG0380013794.01.T01 MTR_1395s0010 33.577 137 83 2 1 137 285 413 5.26e-12 67.4
MsG0380013794.01.T01 MTR_7g007620 37.500 144 75 6 1 140 191 323 5.47e-12 67.4
MsG0380013794.01.T01 MTR_7g039330 30.667 150 88 3 3 146 431 570 5.53e-12 67.8
MsG0380013794.01.T01 MTR_5g096340 29.655 145 70 2 1 143 312 426 5.72e-12 67.4
MsG0380013794.01.T01 MTR_8g036920 30.872 149 81 4 1 140 134 269 5.75e-12 66.6
MsG0380013794.01.T01 MTR_5g085700 31.333 150 70 3 6 152 239 358 5.85e-12 67.4
MsG0380013794.01.T01 MTR_5g085700 29.333 150 97 3 1 148 187 329 1.94e-11 65.9
MsG0380013794.01.T01 MTR_5g085700 32.886 149 90 3 1 146 474 615 4.04e-11 65.1
MsG0380013794.01.T01 MTR_7g446180 30.769 169 95 5 1 148 205 372 6.00e-12 67.0
MsG0380013794.01.T01 MTR_2g075060 29.412 136 74 2 20 147 92 213 6.03e-12 67.4
MsG0380013794.01.T01 MTR_5g086600 36.220 127 73 2 8 132 175 295 6.19e-12 67.0
MsG0380013794.01.T01 MTR_0491s0020 32.000 150 92 3 1 147 142 284 6.22e-12 66.6
MsG0380013794.01.T01 MTR_7g023730 31.333 150 93 4 1 147 180 322 7.39e-12 66.2
MsG0380013794.01.T01 MTR_2g073630 31.667 180 103 4 3 180 153 314 7.60e-12 67.0
MsG0380013794.01.T01 MTR_2g078810 29.936 157 100 3 1 147 449 605 9.72e-12 67.0
MsG0380013794.01.T01 MTR_2g073600 29.744 195 105 6 6 180 167 349 9.74e-12 66.6
MsG0380013794.01.T01 MTR_4g094610 32.886 149 92 3 1 146 534 677 1.01e-11 67.0
MsG0380013794.01.T01 MTR_2g078810 29.936 157 100 3 1 147 469 625 1.06e-11 66.6
MsG0380013794.01.T01 MTR_1g100787 32.258 155 95 4 2 147 529 682 1.08e-11 66.6
MsG0380013794.01.T01 MTR_1g100787 31.788 151 84 4 6 137 438 588 5.35e-11 64.7
MsG0380013794.01.T01 MTR_1g100787 29.480 173 97 4 5 172 101 253 7.11e-11 64.3
MsG0380013794.01.T01 MTR_1g100787 28.824 170 95 4 3 148 686 853 8.13e-11 63.9
MsG0380013794.01.T01 MTR_5g082920 31.013 158 101 3 3 158 180 331 1.10e-11 66.6
MsG0380013794.01.T01 MTR_1g029940 33.108 148 92 3 1 146 327 469 1.10e-11 66.6
MsG0380013794.01.T01 MTR_1g029940 35.417 144 77 5 1 137 399 533 2.73e-11 65.5
MsG0380013794.01.T01 MTR_8g089210 34.043 141 80 5 3 138 369 501 1.12e-11 66.6
MsG0380013794.01.T01 MTR_8g089210 27.219 169 94 4 6 146 269 436 3.89e-11 65.1
MsG0380013794.01.T01 MTR_7g010000 31.579 152 88 4 1 146 116 257 1.28e-11 66.2
MsG0380013794.01.T01 MTR_7g010000 31.298 131 60 1 18 148 87 187 6.87e-11 64.3
MsG0380013794.01.T01 MTR_5g026200 33.108 148 87 3 3 148 296 433 1.31e-11 66.2
MsG0380013794.01.T01 MTR_4g036695 30.233 172 97 5 1 150 179 349 1.37e-11 66.2
MsG0380013794.01.T01 MTR_6g036790 33.333 156 88 6 3 151 362 508 1.37e-11 66.2
MsG0380013794.01.T01 MTR_1g040615 32.168 143 65 3 6 146 611 723 1.52e-11 66.2
MsG0380013794.01.T01 MTR_5g025840 23.875 289 180 7 1 263 369 643 1.61e-11 66.2
MsG0380013794.01.T01 MTR_5g021290 26.364 220 140 5 3 205 133 347 1.74e-11 65.5
MsG0380013794.01.T01 MTR_1g102500 30.986 142 88 4 1 139 425 559 2.06e-11 65.9
MsG0380013794.01.T01 MTR_1g102500 31.690 142 81 4 6 141 334 465 3.17e-11 65.1
MsG0380013794.01.T01 MTR_7g081410 34.615 130 78 3 19 147 93 216 2.15e-11 65.9
MsG0380013794.01.T01 MTR_7g066620 31.034 145 83 2 20 147 574 718 2.40e-11 65.5
MsG0380013794.01.T01 MTR_1g040545 30.070 143 68 2 6 146 491 603 2.48e-11 65.5
MsG0380013794.01.T01 MTR_5g086570 33.813 139 81 4 1 137 655 784 2.82e-11 65.5
MsG0380013794.01.T01 MTR_1g040575 33.088 136 59 3 6 139 604 709 2.84e-11 65.5
MsG0380013794.01.T01 MTR_4g088320 29.586 169 111 3 1 167 314 476 2.85e-11 65.5
MsG0380013794.01.T01 MTR_6g088755 32.609 138 84 3 5 141 408 537 2.86e-11 65.5
MsG0380013794.01.T01 MTR_1g038890 32.515 163 89 7 1 155 467 616 3.34e-11 65.1
MsG0380013794.01.T01 MTR_1g038890 30.345 145 93 3 1 143 251 389 7.07e-11 64.3
MsG0380013794.01.T01 MTR_5g063760 30.357 168 94 5 1 148 293 457 3.77e-11 64.7
MsG0380013794.01.T01 MTR_6g471240 30.000 170 96 5 1 147 723 892 3.78e-11 65.1
MsG0380013794.01.T01 MTR_6g036840 30.201 149 93 4 3 147 387 528 3.79e-11 65.1
MsG0380013794.01.T01 MTR_6g036840 31.333 150 72 3 1 148 433 553 8.17e-11 63.9
MsG0380013794.01.T01 MTR_7g081410 30.357 168 93 5 3 147 170 336 4.15e-11 65.1
MsG0380013794.01.T01 MTR_1g047670 27.586 174 104 4 1 153 445 617 4.79e-11 64.7
MsG0380013794.01.T01 MTR_7g051040 31.544 149 94 3 1 147 375 517 5.37e-11 64.7
MsG0380013794.01.T01 MTR_5g079980 29.371 143 94 2 6 147 250 386 5.71e-11 64.3
MsG0380013794.01.T01 MTR_1g069470 30.464 151 93 4 1 147 193 335 5.73e-11 64.3
MsG0380013794.01.T01 MTR_3g060880 29.730 148 96 3 1 146 330 471 5.82e-11 64.3
MsG0380013794.01.T01 MTR_7g045860 34.266 143 62 4 6 146 567 679 5.95e-11 64.3
MsG0380013794.01.T01 MTR_8g077105 33.094 139 85 2 1 137 306 438 6.48e-11 64.3
MsG0380013794.01.T01 MTR_8g469870 28.105 153 87 4 6 141 132 278 7.12e-11 62.8
MsG0380013794.01.T01 MTR_5g063740 30.952 168 93 5 1 148 669 833 7.31e-11 63.9
MsG0380013794.01.T01 MTR_2g017420 27.190 331 182 13 1 299 681 984 7.55e-11 63.9
MsG0380013794.01.T01 MTR_5g087370 30.220 182 102 8 1 171 386 553 7.59e-11 63.9
MsG0380013794.01.T01 MTR_8g470970 30.216 139 87 4 6 141 132 263 7.64e-11 62.8
MsG0380013794.01.T01 MTR_1g107500 29.911 224 129 10 1 215 112 316 8.28e-11 63.2
MsG0380013794.01.T01 MTR_7g007550 29.139 151 97 3 1 148 126 269 8.45e-11 63.5
MsG0380013794.01.T01 MTR_3g437630 31.126 151 93 5 1 147 276 419 9.43e-11 63.9
MsG0380013794.01.T01 MTR_1g040625 31.902 163 91 6 1 155 48 198 9.60e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013794.01.T01 AT2G42790 76.042 96 23 0 149 244 77 172 5.64e-45 161
MsG0380013794.01.T01 AT3G58750 75.000 96 24 0 149 244 82 177 1.64e-44 160
MsG0380013794.01.T01 AT3G58740 73.958 96 25 0 149 244 79 174 8.15e-44 157
MsG0380013794.01.T01 AT2G34930 33.557 149 93 2 1 147 692 836 1.55e-19 90.5
MsG0380013794.01.T01 AT1G74170 30.601 183 91 3 1 147 648 830 7.88e-18 85.5
MsG0380013794.01.T01 AT1G74170 30.601 183 91 3 1 147 716 898 7.90e-18 85.5
MsG0380013794.01.T01 AT3G53240 32.620 187 86 5 1 147 603 789 2.87e-17 84.0
MsG0380013794.01.T01 AT3G53240 32.620 187 86 5 1 147 567 753 2.91e-17 83.6
MsG0380013794.01.T01 AT3G53240 32.620 187 86 5 1 147 567 753 2.91e-17 83.6
MsG0380013794.01.T01 AT4G20140 30.952 168 96 4 1 157 676 834 1.71e-15 78.6
MsG0380013794.01.T01 AT4G20140 32.692 156 90 4 1 150 268 414 7.18e-13 70.5
MsG0380013794.01.T01 AT4G20140 31.884 138 62 2 5 140 224 331 8.70e-12 67.0
MsG0380013794.01.T01 AT5G44700 29.870 154 93 3 1 148 677 821 4.78e-15 77.0
MsG0380013794.01.T01 AT5G44700 29.310 174 90 5 1 147 245 412 3.77e-11 65.1
MsG0380013794.01.T01 AT5G44700 30.201 149 96 2 1 147 149 291 9.97e-11 63.9
MsG0380013794.01.T01 AT4G36180 33.333 147 82 3 1 141 433 569 2.10e-14 75.1
MsG0380013794.01.T01 AT3G20820 35.616 146 78 5 1 140 132 267 2.49e-14 73.9
MsG0380013794.01.T01 AT1G25320 30.357 168 92 5 1 145 96 261 4.37e-14 73.9
MsG0380013794.01.T01 AT2G42800 31.973 147 90 3 7 150 152 291 5.28e-14 73.2
MsG0380013794.01.T01 AT1G71400 36.220 127 75 2 20 146 136 256 6.99e-14 73.6
MsG0380013794.01.T01 AT1G71400 30.769 156 96 3 3 156 358 503 1.47e-11 66.2
MsG0380013794.01.T01 AT5G63930 30.337 178 91 5 1 151 374 545 8.25e-14 73.2
MsG0380013794.01.T01 AT5G63930 30.337 178 91 5 1 151 438 609 8.38e-14 73.2
MsG0380013794.01.T01 AT5G56040 33.784 148 90 2 1 146 318 459 8.90e-14 73.2
MsG0380013794.01.T01 AT5G56040 33.784 148 90 2 1 146 318 459 1.25e-13 72.8
MsG0380013794.01.T01 AT5G07280 32.143 140 85 3 1 137 429 561 2.11e-13 72.0
MsG0380013794.01.T01 AT5G07280 33.125 160 94 5 1 156 633 783 1.55e-12 69.3
MsG0380013794.01.T01 AT5G07280 31.111 135 84 3 10 141 79 207 5.33e-11 64.7
MsG0380013794.01.T01 AT5G07280 30.065 153 97 4 3 146 479 630 7.69e-11 64.3
MsG0380013794.01.T01 AT1G08590 32.895 152 90 4 1 148 154 297 2.18e-13 72.0
MsG0380013794.01.T01 AT1G08590 32.215 149 93 3 1 147 202 344 4.81e-12 67.8
MsG0380013794.01.T01 AT5G49290 28.191 188 94 5 1 147 583 770 3.15e-13 71.6
MsG0380013794.01.T01 AT5G49290 28.191 188 94 5 1 147 608 795 3.18e-13 71.6
MsG0380013794.01.T01 AT5G49290 28.191 188 94 5 1 147 608 795 3.18e-13 71.6
MsG0380013794.01.T01 AT5G49290 28.191 188 94 5 1 147 608 795 3.18e-13 71.6
MsG0380013794.01.T01 AT5G49290 28.191 188 94 5 1 147 555 742 3.20e-13 71.2
MsG0380013794.01.T01 AT5G49290 28.191 188 94 5 1 147 622 809 3.65e-13 71.2
MsG0380013794.01.T01 AT5G49290 28.191 188 94 5 1 147 365 552 3.76e-13 71.2
MsG0380013794.01.T01 AT5G49290 28.191 188 94 5 1 147 580 767 3.83e-13 71.2
MsG0380013794.01.T01 AT1G17230 31.818 154 83 3 4 148 195 335 1.45e-12 69.3
MsG0380013794.01.T01 AT1G17230 30.899 178 90 5 1 151 432 603 2.54e-12 68.6
MsG0380013794.01.T01 AT1G17230 31.818 154 83 3 4 148 195 335 1.67e-12 69.3
MsG0380013794.01.T01 AT1G17230 30.899 178 90 5 1 151 432 603 2.86e-12 68.6
MsG0380013794.01.T01 AT1G17230 31.818 154 83 3 4 148 195 335 1.69e-12 69.3
MsG0380013794.01.T01 AT1G17230 30.899 178 90 5 1 151 432 603 2.57e-12 68.6
MsG0380013794.01.T01 AT3G56370 27.389 157 81 3 1 155 148 273 1.99e-12 68.9
MsG0380013794.01.T01 AT3G56370 31.613 155 91 4 1 141 268 421 3.70e-11 65.1
MsG0380013794.01.T01 AT1G35710 35.570 149 81 4 1 144 587 725 2.10e-12 68.9
MsG0380013794.01.T01 AT1G35710 30.247 162 90 5 3 154 181 329 5.70e-11 64.7
MsG0380013794.01.T01 AT3G11080 30.233 172 99 4 1 151 154 325 4.65e-12 67.8
MsG0380013794.01.T01 AT3G11080 30.233 172 99 4 1 151 154 325 4.65e-12 67.8
MsG0380013794.01.T01 AT2G15080 30.822 146 91 3 1 143 117 255 5.19e-12 67.8
MsG0380013794.01.T01 AT2G15080 30.822 146 91 3 1 143 117 255 5.19e-12 67.8
MsG0380013794.01.T01 AT5G53890 29.375 160 97 4 1 147 431 587 5.56e-12 67.8
MsG0380013794.01.T01 AT3G28890 33.571 140 87 1 7 146 110 243 8.21e-12 67.0
MsG0380013794.01.T01 AT3G28890 30.636 173 109 4 1 171 126 289 3.41e-11 65.1
MsG0380013794.01.T01 AT3G28890 33.571 140 87 1 7 146 110 243 8.21e-12 67.0
MsG0380013794.01.T01 AT3G28890 30.636 173 109 4 1 171 126 289 3.41e-11 65.1
MsG0380013794.01.T01 AT1G65380 29.814 161 96 5 1 155 320 469 8.48e-12 67.0
MsG0380013794.01.T01 AT3G23110 29.730 148 71 3 3 147 262 379 8.83e-12 67.0
MsG0380013794.01.T01 AT4G28650 30.968 155 87 4 1 147 145 287 9.72e-12 67.0
MsG0380013794.01.T01 AT4G28650 31.677 161 84 4 6 143 390 547 9.72e-12 67.0
MsG0380013794.01.T01 AT4G26540 32.432 148 92 2 1 146 315 456 1.12e-11 66.6
MsG0380013794.01.T01 AT5G01890 28.272 191 89 5 1 143 242 432 1.18e-11 66.6
MsG0380013794.01.T01 AT1G33600 30.899 178 106 5 1 166 155 327 1.19e-11 66.2
MsG0380013794.01.T01 AT1G33600 30.899 178 106 5 1 166 155 327 1.19e-11 66.2
MsG0380013794.01.T01 AT1G74190 29.012 162 99 6 1 148 137 296 1.28e-11 66.6
MsG0380013794.01.T01 AT2G02780 33.333 141 83 3 1 139 136 267 1.29e-11 66.2
MsG0380013794.01.T01 AT1G74360 29.167 168 98 5 1 147 257 424 1.31e-11 66.6
MsG0380013794.01.T01 AT2G02780 33.333 141 83 3 1 139 136 267 1.43e-11 66.2
MsG0380013794.01.T01 AT2G02780 33.333 141 83 3 1 139 136 267 1.56e-11 66.2
MsG0380013794.01.T01 AT1G73080 32.484 157 85 3 1 136 535 691 1.95e-11 65.9
MsG0380013794.01.T01 AT3G11010 30.405 148 95 3 1 146 174 315 2.26e-11 65.9
MsG0380013794.01.T01 AT3G24240 29.530 149 95 4 1 146 423 564 2.32e-11 65.9
MsG0380013794.01.T01 AT3G11010 30.405 148 95 3 1 146 111 252 2.35e-11 65.5
MsG0380013794.01.T01 AT5G48940 30.909 165 97 4 5 163 404 557 2.42e-11 65.9
MsG0380013794.01.T01 AT1G17750 31.818 176 98 7 1 154 488 663 2.49e-11 65.5
MsG0380013794.01.T01 AT1G66830 34.586 133 78 3 25 155 97 222 3.04e-11 65.1
MsG0380013794.01.T01 AT3G28040 30.070 143 90 4 1 140 228 363 3.11e-11 65.5
MsG0380013794.01.T01 AT1G56140 30.579 121 78 2 27 147 107 221 3.84e-11 65.1
MsG0380013794.01.T01 AT3G47570 29.167 168 97 3 1 147 366 532 4.29e-11 65.1
MsG0380013794.01.T01 AT2G26380 30.714 140 90 2 6 143 162 296 5.32e-11 64.3
MsG0380013794.01.T01 AT2G33170 30.872 149 94 4 6 151 479 621 8.52e-11 63.9
MsG0380013794.01.T01 AT2G33170 30.872 149 94 4 6 151 479 621 8.52e-11 63.9
MsG0380013794.01.T01 AT2G26330 30.345 145 89 3 3 143 314 450 9.74e-11 63.9
MsG0380013794.01.T01 AT2G24130 30.137 146 90 4 1 141 374 512 9.75e-11 63.9

Find 64 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCAGCCAATAACTTATT+TGG 0.153231 3:+45747519 MsG0380013794.01.T01:CDS
CACTTCTCCAAATAAGTTAT+TGG 0.196586 3:-45747526 None:intergenic
GGCTGAGAAAAGCACCTTTC+CGG 0.262415 3:+45751095 MsG0380013794.01.T01:CDS
TTCTCAGCCAATTCCTCAAT+TGG 0.318218 3:-45751081 None:intergenic
TCAACAATTTCTTATATTGA+TGG 0.338960 3:+45751027 MsG0380013794.01.T01:CDS
AAAGTTCCTTTGTCATGAAA+TGG 0.350283 3:+45752167 MsG0380013794.01.T01:CDS
CAAACTCAATGTAACTTTGA+TGG 0.354138 3:+45752228 MsG0380013794.01.T01:CDS
AGGATACCCAATTGAGGAAT+TGG 0.358737 3:+45751074 MsG0380013794.01.T01:CDS
TTTGCTTTGCAGATATCAAC+TGG 0.364371 3:+45750943 MsG0380013794.01.T01:intron
AATAGTCCCTTCAAATTGAT+TGG 0.364917 3:-45747292 None:intergenic
TCAGCTTTACCACGGTGTTT+TGG 0.366915 3:+45751835 MsG0380013794.01.T01:CDS
TTGGGTATCCTCTATATCTA+AGG 0.367156 3:-45751062 None:intergenic
AAGTGCCATCGGAATTGTTT+CGG 0.377544 3:+45747544 MsG0380013794.01.T01:CDS
GATTGGAGGCATGATAAATA+TGG 0.391771 3:+45747629 MsG0380013794.01.T01:CDS
TTGTCTAAAATCACTACATT+TGG 0.413235 3:-45752625 None:intergenic
GAACTTTGTATAGTGATTGC+AGG 0.413946 3:-45752151 None:intergenic
TCTCAGCCAATTCCTCAATT+GGG 0.429884 3:-45751080 None:intergenic
TGCAAGTCAGTTACAAGAAT+GGG 0.444351 3:+45751792 MsG0380013794.01.T01:CDS
AATGGAGGCATGCATACTTT+CGG 0.446660 3:+45752185 MsG0380013794.01.T01:CDS
TTATCTCACAATAATTTGAC+TGG 0.451746 3:+45747591 MsG0380013794.01.T01:CDS
GGAGCAGTGTTTAAATATCC+AGG 0.455528 3:-45750997 None:intergenic
ATCATGCCTCCAATCGTCTT+CGG 0.456286 3:-45747621 None:intergenic
AGGTCAATAGTTCGCCTATC+CGG 0.456869 3:-45747498 None:intergenic
TCTCTCTTATTTGTTTCACT+TGG 0.458896 3:+45747332 MsG0380013794.01.T01:CDS
TTGAGAGCCAATCAATTTGA+AGG 0.470953 3:+45747285 MsG0380013794.01.T01:CDS
TCTTATATTGATGGTGATGA+GGG 0.476694 3:+45751036 MsG0380013794.01.T01:CDS
TGTCGACAACTTGACAGATA+TGG 0.477923 3:+45747395 MsG0380013794.01.T01:CDS
ACAATTGGGAATCATGAACT+TGG 0.485437 3:+45747200 None:intergenic
CATATGAGATATGACACTTC+CGG 0.491125 3:-45751114 None:intergenic
TTTCGGTTTATTAATAGAGT+AGG 0.503547 3:+45752202 MsG0380013794.01.T01:CDS
CTGCAAGTCAGTTACAAGAA+TGG 0.506092 3:+45751791 MsG0380013794.01.T01:CDS
CAAATAAGTTATTGGCTGAA+AGG 0.506862 3:-45747518 None:intergenic
AAGTTATGTGACGTCATGAT+TGG 0.508610 3:-45747249 None:intergenic
TTCTTATATTGATGGTGATG+AGG 0.518608 3:+45751035 MsG0380013794.01.T01:CDS
GGAACAATTCCGAAGACGAT+TGG 0.518912 3:+45747612 MsG0380013794.01.T01:CDS
AAACCTATCTTGAGAAAATG+AGG 0.525414 3:-45751987 None:intergenic
TTATATTTATGAAGTCGAAC+CGG 0.526214 3:+45747479 MsG0380013794.01.T01:CDS
GTCAAGTTGTCGACACACTT+TGG 0.527333 3:-45747387 None:intergenic
CTGAAAGTTTATTATGTGCA+AGG 0.533550 3:-45747356 None:intergenic
GAGGGGATCCTTAGATATAG+AGG 0.533890 3:+45751054 MsG0380013794.01.T01:CDS
TAAGAAATTGTTGATCGCAC+AGG 0.539966 3:-45751018 None:intergenic
TTTATGAAGTCGAACCGGAT+AGG 0.549438 3:+45747484 MsG0380013794.01.T01:CDS
ACAATTCCGAAGACGATTGG+AGG 0.562991 3:+45747615 MsG0380013794.01.T01:CDS
TTATCAGGTGGTTATTAATG+TGG 0.563512 3:+45752399 MsG0380013794.01.T01:intron
TGAGAGCCAATCAATTTGAA+GGG 0.581808 3:+45747286 MsG0380013794.01.T01:CDS
ACATGATTGCATTCATTCTG+TGG 0.591466 3:-45752563 None:intergenic
TCTTGTAACTGACTTGCAGA+AGG 0.597030 3:-45751787 None:intergenic
GTTCCTTTGTCATGAAATGG+AGG 0.597840 3:+45752170 MsG0380013794.01.T01:CDS
GAGAGATTGAATAGTTGTTG+CGG 0.600825 3:-45747315 None:intergenic
GAGATATGACACTTCCGGAA+AGG 0.610123 3:-45751109 None:intergenic
CAATTGGGAATCATGAACTT+GGG 0.610647 3:+45747201 None:intergenic
GGACTCAAACTTTATGACCC+TGG 0.610890 3:+45750979 MsG0380013794.01.T01:CDS
CTTATTTGGAGAAGTGCCAT+CGG 0.612870 3:+45747533 MsG0380013794.01.T01:CDS
ATATAGAGGATACCCAATTG+AGG 0.617167 3:+45751068 MsG0380013794.01.T01:CDS
CTTATATTGATGGTGATGAG+GGG 0.628137 3:+45751037 MsG0380013794.01.T01:CDS
GAGCAGTGTTTAAATATCCA+GGG 0.630707 3:-45750996 None:intergenic
ATGCCTCCATTTCATGACAA+AGG 0.631642 3:-45752173 None:intergenic
GACGTCACATAACTTAGTAG+TGG 0.652010 3:+45747257 MsG0380013794.01.T01:CDS
ACAAGCCGAAACAATTCCGA+TGG 0.662411 3:-45747549 None:intergenic
TTGCTTTGCAGATATCAACT+GGG 0.666648 3:+45750944 MsG0380013794.01.T01:intron
ATCAACTGGGAAGAATGACA+AGG 0.680165 3:+45750957 MsG0380013794.01.T01:CDS
CTCAACACTCAGCTTTACCA+CGG 0.680779 3:+45751827 MsG0380013794.01.T01:CDS
TCAACTGGGAAGAATGACAA+GGG 0.700148 3:+45750958 MsG0380013794.01.T01:CDS
AAAAGCTCACCAAAACACCG+TGG 0.805856 3:-45751844 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAATTAAATATATTAA+TGG + Chr3:45749971-45749990 MsG0380013794.01.T01:intron 0.0%
!! AATATATTTAATTATATTAA+TGG - Chr3:45749969-45749988 None:intergenic 0.0%
!!! AAATATTAAATTTTATTTAA+GGG + Chr3:45749772-45749791 MsG0380013794.01.T01:intron 0.0%
!!! TAAATATTAAATTTTATTTA+AGG + Chr3:45749771-45749790 MsG0380013794.01.T01:intron 0.0%
!! AAAATTCAAAAACAATTAAT+AGG + Chr3:45749845-45749864 MsG0380013794.01.T01:intron 10.0%
!!! GTAAAATTTTAAGTAAATTT+TGG - Chr3:45748821-45748840 None:intergenic 10.0%
!!! TTTATATAAAATGGTTATTT+TGG - Chr3:45748851-45748870 None:intergenic 10.0%
!! AAAAGTTAAAGATAAAAGTA+AGG + Chr3:45750233-45750252 MsG0380013794.01.T01:intron 15.0%
!! AAAGTTAAAGATAAAAGTAA+GGG + Chr3:45750234-45750253 MsG0380013794.01.T01:intron 15.0%
!! ATTTGAAAAGTTAATGTATA+TGG + Chr3:45752041-45752060 MsG0380013794.01.T01:intron 15.0%
!! GAATGAAATATAAGTAAAAA+TGG - Chr3:45752098-45752117 None:intergenic 15.0%
!! TAGAAGAAAAATAAATATGA+TGG + Chr3:45748615-45748634 MsG0380013794.01.T01:intron 15.0%
!!! AAGATGTTTTAATTTACTTT+AGG - Chr3:45749194-45749213 None:intergenic 15.0%
!!! AATTAGGATTAAACATTTTT+TGG + Chr3:45751611-45751630 MsG0380013794.01.T01:intron 15.0%
!!! ACATAAATTTTTAGAAAGTA+TGG + Chr3:45748725-45748744 MsG0380013794.01.T01:intron 15.0%
!!! ACATCAACAATTTTAATTAA+TGG - Chr3:45749356-45749375 None:intergenic 15.0%
!!! ATAATCTTGTTCTTATTTAT+TGG - Chr3:45747713-45747732 None:intergenic 15.0%
!!! ATCTTTTTACTATTACTTTT+AGG - Chr3:45750440-45750459 None:intergenic 15.0%
!!! ATTAGGATTAAACATTTTTT+GGG + Chr3:45751612-45751631 MsG0380013794.01.T01:intron 15.0%
!!! CTAATTTGTAATTTCATATA+GGG - Chr3:45748644-45748663 None:intergenic 15.0%
!!! GATTTTTATGATGAAATATT+AGG + Chr3:45750690-45750709 MsG0380013794.01.T01:intron 15.0%
!!! TATTTTTGATTTGATCAATT+GGG + Chr3:45750593-45750612 MsG0380013794.01.T01:intron 15.0%
!!! TTAATCTATCTTTTTACTAT+TGG - Chr3:45750447-45750466 None:intergenic 15.0%
!!! TTATTTTTGATTTGATCAAT+TGG + Chr3:45750592-45750611 MsG0380013794.01.T01:intron 15.0%
!!! TTTTTACTTATATTTCATTC+TGG + Chr3:45752098-45752117 MsG0380013794.01.T01:intron 15.0%
!! AAAGATTAAAGCAAATGAAA+TGG - Chr3:45752381-45752400 None:intergenic 20.0%
!! AACTTAAATTCAGTTTAAGT+AGG + Chr3:45749377-45749396 MsG0380013794.01.T01:intron 20.0%
!! AATATGTGAAATGTTTATAC+AGG - Chr3:45747812-45747831 None:intergenic 20.0%
!! AATGTGTTAAATGTCAATAT+AGG + Chr3:45749896-45749915 MsG0380013794.01.T01:intron 20.0%
!! ATATGAAATTACAAATTAGG+AGG + Chr3:45748645-45748664 MsG0380013794.01.T01:intron 20.0%
!! ATATGTGAAATGTTTATACA+GGG - Chr3:45747811-45747830 None:intergenic 20.0%
!! CATATATATATTATCAAAGC+TGG + Chr3:45748335-45748354 MsG0380013794.01.T01:intron 20.0%
!! CCTATATGAAATTACAAATT+AGG + Chr3:45748642-45748661 MsG0380013794.01.T01:intron 20.0%
!! GATCAATAAAACTATTAAGT+AGG - Chr3:45752309-45752328 None:intergenic 20.0%
!! TCAACAATTTCTTATATTGA+TGG + Chr3:45751027-45751046 MsG0380013794.01.T01:CDS 20.0%
!! TCAATCTCTATAAAAGATTA+AGG + Chr3:45748951-45748970 MsG0380013794.01.T01:intron 20.0%
!! TTACATGATTTACTTAAACT+GGG + Chr3:45749554-45749573 MsG0380013794.01.T01:intron 20.0%
!! TTATGTAGAATCATTAAACA+AGG + Chr3:45749456-45749475 MsG0380013794.01.T01:intron 20.0%
!! TTTACATGATTTACTTAAAC+TGG + Chr3:45749553-45749572 MsG0380013794.01.T01:intron 20.0%
!!! ACTTTGTTATTTCATTTAAC+TGG + Chr3:45751888-45751907 MsG0380013794.01.T01:intron 20.0%
!!! AGATTAAATTTTGAATGATG+TGG + Chr3:45750460-45750479 MsG0380013794.01.T01:intron 20.0%
!!! ATCTAGTGTAAAATAACTTT+TGG - Chr3:45748534-45748553 None:intergenic 20.0%
!!! ATCTTTTTACTATTGGAAAT+TGG - Chr3:45750557-45750576 None:intergenic 20.0%
!!! CCTAATTTGTAATTTCATAT+AGG - Chr3:45748645-45748664 None:intergenic 20.0%
!!! CTACAACTTTAAAATTTTAG+TGG - Chr3:45748109-45748128 None:intergenic 20.0%
!!! CTTCTTTTATGTATGTATAT+TGG - Chr3:45750502-45750521 None:intergenic 20.0%
!!! CTTTTTGCTTAAATTTCATT+CGG - Chr3:45752018-45752037 None:intergenic 20.0%
!!! GAGTATAAATTTTCACAAAA+AGG + Chr3:45750054-45750073 MsG0380013794.01.T01:intron 20.0%
!!! GATAATCAAATAATTTTAGC+TGG + Chr3:45751312-45751331 MsG0380013794.01.T01:intron 20.0%
!!! TGATTTTGGAAGAAAAAAAA+AGG + Chr3:45749721-45749740 MsG0380013794.01.T01:intron 20.0%
!!! TTTTTGCTTAAATTTCATTC+GGG - Chr3:45752017-45752036 None:intergenic 20.0%
!!! TTTTTTGGGATCAAATTTTA+TGG + Chr3:45751626-45751645 MsG0380013794.01.T01:intron 20.0%
! AATCTATTCAAATGTTTCAC+CGG + Chr3:45750867-45750886 MsG0380013794.01.T01:intron 25.0%
! ATAATTACACTTGAGAGATT+AGG - Chr3:45751576-45751595 None:intergenic 25.0%
! ATGAACAAAAACATTACAAC+AGG - Chr3:45752523-45752542 None:intergenic 25.0%
! CATGTAAACTTAGTTTAAGT+AGG - Chr3:45749541-45749560 None:intergenic 25.0%
! CATGTTAAGAAACTCAAAAA+TGG + Chr3:45750283-45750302 MsG0380013794.01.T01:intron 25.0%
! CATTTGCTTTAATCTTTATC+AGG + Chr3:45752384-45752403 MsG0380013794.01.T01:intron 25.0%
! GATTGTTTATGGATAAAAGA+GGG - Chr3:45748919-45748938 None:intergenic 25.0%
! GTTGGAAATATACAGAAAAA+TGG - Chr3:45749125-45749144 None:intergenic 25.0%
! TAAGCATGTAGTATTCAAAA+TGG + Chr3:45751428-45751447 MsG0380013794.01.T01:intron 25.0%
! TACCAACTAAGCTATAATTA+CGG - Chr3:45750081-45750100 None:intergenic 25.0%
! TACTATTGGAAATTGGAAAT+TGG - Chr3:45750550-45750569 None:intergenic 25.0%
! TACTTATATTTCATTCTGGA+GGG + Chr3:45752102-45752121 MsG0380013794.01.T01:intron 25.0%
! TCGTCGAAAAAACAATTAAA+AGG + Chr3:45749871-45749890 MsG0380013794.01.T01:intron 25.0%
! TGATTGTTTATGGATAAAAG+AGG - Chr3:45748920-45748939 None:intergenic 25.0%
! TTACTTATATTTCATTCTGG+AGG + Chr3:45752101-45752120 MsG0380013794.01.T01:intron 25.0%
! TTATATTTATGAAGTCGAAC+CGG + Chr3:45747479-45747498 MsG0380013794.01.T01:CDS 25.0%
! TTATCTCACAATAATTTGAC+TGG + Chr3:45747591-45747610 MsG0380013794.01.T01:CDS 25.0%
! TTTCGGTTTATTAATAGAGT+AGG + Chr3:45752202-45752221 MsG0380013794.01.T01:CDS 25.0%
!! AATGTCTTTTGTTCATATCA+AGG + Chr3:45748491-45748510 MsG0380013794.01.T01:intron 25.0%
!! CATTGAAAAACCTTTTATAC+AGG + Chr3:45752540-45752559 MsG0380013794.01.T01:intron 25.0%
!! CTTTGATGGTAAAGTTAAAA+AGG + Chr3:45752242-45752261 MsG0380013794.01.T01:intron 25.0%
!! CTTTTATCCATAAACAATCA+TGG + Chr3:45748920-45748939 MsG0380013794.01.T01:intron 25.0%
!! TAATTATAGCTTAGTTGGTA+GGG + Chr3:45750081-45750100 MsG0380013794.01.T01:intron 25.0%
!! TACTTTTATGCAATAGAGTA+TGG - Chr3:45749221-45749240 None:intergenic 25.0%
!! TATTGAGTACAAACTTGTTT+AGG + Chr3:45747784-45747803 MsG0380013794.01.T01:intron 25.0%
!! TTGTCTAAAATCACTACATT+TGG - Chr3:45752628-45752647 None:intergenic 25.0%
!! TTTTGTAAACAACTCAATTG+TGG - Chr3:45747451-45747470 None:intergenic 25.0%
!!! AAAAGATTAAGGCTTTGTTT+GGG + Chr3:45748962-45748981 MsG0380013794.01.T01:intron 25.0%
!!! ATTTATTGGTTTAATCCCAT+TGG - Chr3:45747699-45747718 None:intergenic 25.0%
!!! TAAAAGATTAAGGCTTTGTT+TGG + Chr3:45748961-45748980 MsG0380013794.01.T01:intron 25.0%
!!! TATGCATATTTTTCAGTGTA+TGG + Chr3:45751757-45751776 MsG0380013794.01.T01:intron 25.0%
!!! TGCTTAAAGAAGTATGATTT+TGG + Chr3:45749707-45749726 MsG0380013794.01.T01:intron 25.0%
!!! TTACTATTACTTTTAGGCAA+AGG - Chr3:45750434-45750453 None:intergenic 25.0%
!!! TTTATTGGTTTAATCCCATT+GGG - Chr3:45747698-45747717 None:intergenic 25.0%
!!! TTTGAGTTCCTTGAATTTTA+AGG + Chr3:45751550-45751569 MsG0380013794.01.T01:intron 25.0%
!!! TTTTTTTTAACAAATAGCCC+AGG - Chr3:45750173-45750192 None:intergenic 25.0%
AAACCTATCTTGAGAAAATG+AGG - Chr3:45751990-45752009 None:intergenic 30.0%
AAAGTTCCTTTGTCATGAAA+TGG + Chr3:45752167-45752186 MsG0380013794.01.T01:CDS 30.0%
AATAAAAAGACTCATGCTAG+TGG + Chr3:45750790-45750809 MsG0380013794.01.T01:intron 30.0%
AATAGTCCCTTCAAATTGAT+TGG - Chr3:45747295-45747314 None:intergenic 30.0%
AATTACACCGCATGTATTTA+TGG - Chr3:45749822-45749841 None:intergenic 30.0%
ACAGAAAAATGGACAAAATG+AGG - Chr3:45749114-45749133 None:intergenic 30.0%
ACCAACTAAGCTATAATTAC+GGG - Chr3:45750080-45750099 None:intergenic 30.0%
AGATTAGGCCTTAAAATTCA+AGG - Chr3:45751561-45751580 None:intergenic 30.0%
AGTTACAAACGTAACATATG+AGG - Chr3:45751261-45751280 None:intergenic 30.0%
ATGAAACCCAAAGGAAAAAA+AGG - Chr3:45749631-45749650 None:intergenic 30.0%
CAAACTCAATGTAACTTTGA+TGG + Chr3:45752228-45752247 MsG0380013794.01.T01:CDS 30.0%
CACTAGATTAGATCTGAAAA+TGG + Chr3:45748546-45748565 MsG0380013794.01.T01:intron 30.0%
CACTTCTCCAAATAAGTTAT+TGG - Chr3:45747529-45747548 None:intergenic 30.0%
CAGAAAAATGGACAAAATGA+GGG - Chr3:45749113-45749132 None:intergenic 30.0%
CTGAAAGTTTATTATGTGCA+AGG - Chr3:45747359-45747378 None:intergenic 30.0%
CTTTCAGCCAATAACTTATT+TGG + Chr3:45747519-45747538 MsG0380013794.01.T01:CDS 30.0%
GAATACATCAGCAATATATC+TGG + Chr3:45747760-45747779 MsG0380013794.01.T01:intron 30.0%
GATAATTGTTGTGTTAACAG+TGG + Chr3:45751917-45751936 MsG0380013794.01.T01:intron 30.0%
GATCCACATATCATAAACAA+AGG - Chr3:45751676-45751695 None:intergenic 30.0%
GGAAATTGGAAATTGGAAAT+TGG - Chr3:45750543-45750562 None:intergenic 30.0%
GGTATAACCATAAATACATG+CGG + Chr3:45749812-45749831 MsG0380013794.01.T01:intron 30.0%
GTAATTATAGCTTAGTTGGT+AGG + Chr3:45750080-45750099 MsG0380013794.01.T01:intron 30.0%
GTTAACTGTTAACTCTATCA+TGG - Chr3:45747916-45747935 None:intergenic 30.0%
TGGAAGAAATAGAAGACATT+GGG + Chr3:45749040-45749059 MsG0380013794.01.T01:intron 30.0%
TGTACATCCATGATTGTTTA+TGG - Chr3:45748930-45748949 None:intergenic 30.0%
TTATCAGGTGGTTATTAATG+TGG + Chr3:45752399-45752418 MsG0380013794.01.T01:intron 30.0%
TTGCTTTAATCTTTATCAGG+TGG + Chr3:45752387-45752406 MsG0380013794.01.T01:intron 30.0%
! ATTTTTATGCAAATCGTGGA+AGG + Chr3:45752432-45752451 MsG0380013794.01.T01:CDS 30.0%
! CAAATAAGTTATTGGCTGAA+AGG - Chr3:45747521-45747540 None:intergenic 30.0%
! TCCATCAATATTTTCCCAAT+GGG + Chr3:45747681-45747700 MsG0380013794.01.T01:intron 30.0%
! TCTCTCTTATTTGTTTCACT+TGG + Chr3:45747332-45747351 MsG0380013794.01.T01:CDS 30.0%
! TTCCATCAATATTTTCCCAA+TGG + Chr3:45747680-45747699 MsG0380013794.01.T01:intron 30.0%
! TTGGGAGAAAATGAATTTTC+TGG + Chr3:45747219-45747238 MsG0380013794.01.T01:CDS 30.0%
! TTTTATGAACTCTACAACGA+AGG + Chr3:45749308-45749327 MsG0380013794.01.T01:intron 30.0%
!! AAAGACATTTGCTATGTATG+AGG - Chr3:45748480-45748499 None:intergenic 30.0%
!! ATGTATATTGGTGTTACGTA+CGG - Chr3:45750490-45750509 None:intergenic 30.0%
!! TCTTATATTGATGGTGATGA+GGG + Chr3:45751036-45751055 MsG0380013794.01.T01:CDS 30.0%
!! TTCTTATATTGATGGTGATG+AGG + Chr3:45751035-45751054 MsG0380013794.01.T01:CDS 30.0%
!!! AGGGAAGTTTTGTCATTTTA+AGG + Chr3:45749791-45749810 MsG0380013794.01.T01:intron 30.0%
AAGAAATAGAAGACATTGGG+AGG + Chr3:45749043-45749062 MsG0380013794.01.T01:intron 35.0%
AAGTTATGTGACGTCATGAT+TGG - Chr3:45747252-45747271 None:intergenic 35.0%
ACAGCACAATGCATGATAAT+TGG + Chr3:45748439-45748458 MsG0380013794.01.T01:intron 35.0%
ACATATGTGCGATGTCTAAT+CGG - Chr3:45751490-45751509 None:intergenic 35.0%
ACATGATTGCATTCATTCTG+TGG - Chr3:45752566-45752585 None:intergenic 35.0%
ACCTTTCACATTGCATAAAC+AGG + Chr3:45748234-45748253 MsG0380013794.01.T01:intron 35.0%
AGGACTTGAAATACTTCAAC+AGG - Chr3:45748377-45748396 None:intergenic 35.0%
ATATAGAGGATACCCAATTG+AGG + Chr3:45751068-45751087 MsG0380013794.01.T01:CDS 35.0%
CACGATTTGCATAAAAATGC+AGG - Chr3:45752430-45752449 None:intergenic 35.0%
CATATGAGATATGACACTTC+CGG - Chr3:45751117-45751136 None:intergenic 35.0%
CGAATCACAAAACAATGTTG+AGG + Chr3:45751352-45751371 MsG0380013794.01.T01:intron 35.0%
CTATTTGATAAGCTGAGATG+TGG + Chr3:45748679-45748698 MsG0380013794.01.T01:intron 35.0%
GAACTTTGTATAGTGATTGC+AGG - Chr3:45752154-45752173 None:intergenic 35.0%
GAGAAGAAATCAAATCACAC+CGG - Chr3:45750889-45750908 None:intergenic 35.0%
GAGAGATTGAATAGTTGTTG+CGG - Chr3:45747318-45747337 None:intergenic 35.0%
GAGCAGTGTTTAAATATCCA+GGG - Chr3:45750999-45751018 None:intergenic 35.0%
GTGCATGAAACCTTTATACA+GGG + Chr3:45751165-45751184 MsG0380013794.01.T01:intron 35.0%
GTGGAAGAAATAGAAGACAT+TGG + Chr3:45749039-45749058 MsG0380013794.01.T01:intron 35.0%
TAAGAAATTGTTGATCGCAC+AGG - Chr3:45751021-45751040 None:intergenic 35.0%
TAGATTTACACCAGCATATC+CGG - Chr3:45750853-45750872 None:intergenic 35.0%
TCAAAAGACTAGAGTTGCTA+TGG - Chr3:45748173-45748192 None:intergenic 35.0%
TCCCATTGGGAAAATATTGA+TGG - Chr3:45747685-45747704 None:intergenic 35.0%
TGAGAGCCAATCAATTTGAA+GGG + Chr3:45747286-45747305 MsG0380013794.01.T01:CDS 35.0%
TGCAAGTCAGTTACAAGAAT+GGG + Chr3:45751792-45751811 MsG0380013794.01.T01:CDS 35.0%
TGTGCATGAAACCTTTATAC+AGG + Chr3:45751164-45751183 MsG0380013794.01.T01:intron 35.0%
TTGAGAGCCAATCAATTTGA+AGG + Chr3:45747285-45747304 MsG0380013794.01.T01:CDS 35.0%
TTGAGTGAAATGAAACCCAA+AGG - Chr3:45749640-45749659 None:intergenic 35.0%
TTGCTTTGCAGATATCAACT+GGG + Chr3:45750944-45750963 MsG0380013794.01.T01:intron 35.0%
TTGGGTATCCTCTATATCTA+AGG - Chr3:45751065-45751084 None:intergenic 35.0%
TTTCTTAACATGTGCCCTAA+GGG - Chr3:45750275-45750294 None:intergenic 35.0%
TTTGCATCTCAGTTAGTCAA+TGG - Chr3:45751713-45751732 None:intergenic 35.0%
TTTGCTTTGCAGATATCAAC+TGG + Chr3:45750943-45750962 MsG0380013794.01.T01:intron 35.0%
! AAAAGGACTTGCTTTAACGA+TGG - Chr3:45749614-45749633 None:intergenic 35.0%
! AATCACACCTCGTGTATTTT+TGG + Chr3:45748790-45748809 MsG0380013794.01.T01:intron 35.0%
! ATGCCTCATTTTCTCAAGAT+AGG + Chr3:45751984-45752003 MsG0380013794.01.T01:CDS 35.0%
! CTGCATTTTTATGCAAATCG+TGG + Chr3:45752428-45752447 MsG0380013794.01.T01:CDS 35.0%
! GATTGGAGGCATGATAAATA+TGG + Chr3:45747629-45747648 MsG0380013794.01.T01:CDS 35.0%
! TCAAATTTTATGGCCTGACA+TGG + Chr3:45751636-45751655 MsG0380013794.01.T01:intron 35.0%
! TGGCCTTTGTTTATGATATG+TGG + Chr3:45751670-45751689 MsG0380013794.01.T01:intron 35.0%
!! AATCATTAACTTGTGCCTTG+AGG + Chr3:45750397-45750416 MsG0380013794.01.T01:intron 35.0%
!! ATCATTAACTTGTGCCTTGA+GGG + Chr3:45750398-45750417 MsG0380013794.01.T01:intron 35.0%
!! CTTATATTGATGGTGATGAG+GGG + Chr3:45751037-45751056 MsG0380013794.01.T01:CDS 35.0%
!! GAAAATTTTGTTTCAGCGCA+AGG - Chr3:45747740-45747759 None:intergenic 35.0%
!! GGTAGGGATAATTTGTTCAA+GGG + Chr3:45750097-45750116 MsG0380013794.01.T01:intron 35.0%
!! TGGTAGGGATAATTTGTTCA+AGG + Chr3:45750096-45750115 MsG0380013794.01.T01:intron 35.0%
!! TTAGGCTTTGTTTGAGAGTT+TGG - Chr3:45749176-45749195 None:intergenic 35.0%
!!! AGCAAGTCCTTTTTTTCCTT+TGG + Chr3:45749621-45749640 MsG0380013794.01.T01:intron 35.0%
!!! GATGGTTTTGGAAAAAAGGA+AGG + Chr3:45749011-45749030 MsG0380013794.01.T01:intron 35.0%
!!! GCAAGTCCTTTTTTTCCTTT+GGG + Chr3:45749622-45749641 MsG0380013794.01.T01:intron 35.0%
AAAAGACTCATGCTAGTGGA+CGG + Chr3:45750794-45750813 MsG0380013794.01.T01:intron 40.0%
AAACAAAGGCCATAACAGCA+GGG - Chr3:45751662-45751681 None:intergenic 40.0%
AAGTGCCATCGGAATTGTTT+CGG + Chr3:45747544-45747563 MsG0380013794.01.T01:CDS 40.0%
AATCAAGTCTTCTCCATCGA+AGG + Chr3:45749675-45749694 MsG0380013794.01.T01:intron 40.0%
AATTGAGCTCCTGCTAGTTA+AGG + Chr3:45752274-45752293 MsG0380013794.01.T01:intron 40.0%
ACACAAGCGTAAAAAGACAG+AGG - Chr3:45748397-45748416 None:intergenic 40.0%
ACACATTATGTGTGGAGAAG+TGG - Chr3:45750146-45750165 None:intergenic 40.0%
AGGATACCCAATTGAGGAAT+TGG + Chr3:45751074-45751093 MsG0380013794.01.T01:CDS 40.0%
ATCAACTGGGAAGAATGACA+AGG + Chr3:45750957-45750976 MsG0380013794.01.T01:CDS 40.0%
ATCAAGTCTTCTCCATCGAA+GGG + Chr3:45749676-45749695 MsG0380013794.01.T01:intron 40.0%
ATGCCTCCATTTCATGACAA+AGG - Chr3:45752176-45752195 None:intergenic 40.0%
CATTCTGTGGCCTGTATAAA+AGG - Chr3:45752553-45752572 None:intergenic 40.0%
CATTGCATAAACAGGCATAG+CGG + Chr3:45748242-45748261 MsG0380013794.01.T01:intron 40.0%
CCAATGACCAATTAATCAGG+GGG - Chr3:45750829-45750848 None:intergenic 40.0%
CCCAATGACCAATTAATCAG+GGG - Chr3:45750830-45750849 None:intergenic 40.0%
CCCCTGATTAATTGGTCATT+GGG + Chr3:45750827-45750846 MsG0380013794.01.T01:intron 40.0%
CTATACACGACCCTGTATAA+AGG - Chr3:45751178-45751197 None:intergenic 40.0%
CTGCAAGTCAGTTACAAGAA+TGG + Chr3:45751791-45751810 MsG0380013794.01.T01:CDS 40.0%
GACGTCACATAACTTAGTAG+TGG + Chr3:45747257-45747276 MsG0380013794.01.T01:CDS 40.0%
GCCCAATGACCAATTAATCA+GGG - Chr3:45750831-45750850 None:intergenic 40.0%
GCCCGTAATTATAGCTTAGT+TGG + Chr3:45750076-45750095 MsG0380013794.01.T01:intron 40.0%
GCCTGTTTATGCAATGTGAA+AGG - Chr3:45748238-45748257 None:intergenic 40.0%
GGAGCAGTGTTTAAATATCC+AGG - Chr3:45751000-45751019 None:intergenic 40.0%
GTTCCTTTGTCATGAAATGG+AGG + Chr3:45752170-45752189 MsG0380013794.01.T01:CDS 40.0%
GTTTCTTAACATGTGCCCTA+AGG - Chr3:45750276-45750295 None:intergenic 40.0%
TAAACAAAGGCCATAACAGC+AGG - Chr3:45751663-45751682 None:intergenic 40.0%
TCAACTGGGAAGAATGACAA+GGG + Chr3:45750958-45750977 MsG0380013794.01.T01:CDS 40.0%
TCTCAGCCAATTCCTCAATT+GGG - Chr3:45751083-45751102 None:intergenic 40.0%
TGATTAATTGGTCATTGGGC+CGG + Chr3:45750831-45750850 MsG0380013794.01.T01:intron 40.0%
TGTCGACAACTTGACAGATA+TGG + Chr3:45747395-45747414 MsG0380013794.01.T01:CDS 40.0%
TTCCACTAACCTTAACTAGC+AGG - Chr3:45752286-45752305 None:intergenic 40.0%
TTCTCAGCCAATTCCTCAAT+TGG - Chr3:45751084-45751103 None:intergenic 40.0%
TTCTCCACACATAATGTGTG+TGG + Chr3:45750147-45750166 MsG0380013794.01.T01:intron 40.0%
TTTATGAAGTCGAACCGGAT+AGG + Chr3:45747484-45747503 MsG0380013794.01.T01:CDS 40.0%
! AATGGAGGCATGCATACTTT+CGG + Chr3:45752185-45752204 MsG0380013794.01.T01:CDS 40.0%
! CTACAACGAAGGTTAGTTGA+TGG + Chr3:45749319-45749338 MsG0380013794.01.T01:intron 40.0%
! CTTTGTTTGAGAGTTTGGAG+TGG - Chr3:45749171-45749190 None:intergenic 40.0%
! TCTGTCTTTTTACGCTTGTG+TGG + Chr3:45748396-45748415 MsG0380013794.01.T01:intron 40.0%
! TTCTGGAGGGCGTAATTTAT+AGG + Chr3:45752115-45752134 MsG0380013794.01.T01:intron 40.0%
! TTTGAGAGTTTGGAGTGGAA+GGG - Chr3:45749166-45749185 None:intergenic 40.0%
! TTTTGGTCTCTGAGTTGTGT+TGG - Chr3:45748517-45748536 None:intergenic 40.0%
!! ACTGCGACGTGTATTTTAGA+AGG + Chr3:45750028-45750047 MsG0380013794.01.T01:intron 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG + Chr3:45750258-45750277 MsG0380013794.01.T01:intron 40.0%
!! CTGCGACGTGTATTTTAGAA+GGG + Chr3:45750029-45750048 MsG0380013794.01.T01:intron 40.0%
!! CTTATTTGGAGAAGTGCCAT+CGG + Chr3:45747533-45747552 MsG0380013794.01.T01:CDS 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG + Chr3:45748969-45748988 MsG0380013794.01.T01:intron 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG + Chr3:45750257-45750276 MsG0380013794.01.T01:intron 40.0%
!! TCTTGTAACTGACTTGCAGA+AGG - Chr3:45751790-45751809 None:intergenic 40.0%
!!! AGGGGATGGTTTTGGAAAAA+AGG + Chr3:45749007-45749026 MsG0380013794.01.T01:intron 40.0%
AAAAGCTCACCAAAACACCG+TGG - Chr3:45751847-45751866 None:intergenic 45.0%
ACAAGCCGAAACAATTCCGA+TGG - Chr3:45747552-45747571 None:intergenic 45.0%
ACAATTCCGAAGACGATTGG+AGG + Chr3:45747615-45747634 MsG0380013794.01.T01:CDS 45.0%
ACACATAATGTGTGTGGCCT+GGG + Chr3:45750153-45750172 MsG0380013794.01.T01:intron 45.0%
AGCAAGATTTCTCCCTTCGA+TGG - Chr3:45749691-45749710 None:intergenic 45.0%
AGGTCAATAGTTCGCCTATC+CGG - Chr3:45747501-45747520 None:intergenic 45.0%
ATAGAAGACATTGGGAGGAG+AGG + Chr3:45749048-45749067 MsG0380013794.01.T01:intron 45.0%
ATCATGCCTCCAATCGTCTT+CGG - Chr3:45747624-45747643 None:intergenic 45.0%
CCCCCTGATTAATTGGTCAT+TGG + Chr3:45750826-45750845 MsG0380013794.01.T01:intron 45.0%
CGCTTGTGTGGTTAAAGACA+TGG + Chr3:45748408-45748427 MsG0380013794.01.T01:intron 45.0%
CTCAACACTCAGCTTTACCA+CGG + Chr3:45751827-45751846 MsG0380013794.01.T01:CDS 45.0%
CTCCTGCTAGTTAAGGTTAG+TGG + Chr3:45752281-45752300 MsG0380013794.01.T01:intron 45.0%
GAGATATGACACTTCCGGAA+AGG - Chr3:45751112-45751131 None:intergenic 45.0%
GAGGGGATCCTTAGATATAG+AGG + Chr3:45751054-45751073 MsG0380013794.01.T01:CDS 45.0%
GCATCTCAGTTAGTCAATGG+TGG - Chr3:45751710-45751729 None:intergenic 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG + Chr3:45749020-45749039 MsG0380013794.01.T01:intron 45.0%
GGAACAATTCCGAAGACGAT+TGG + Chr3:45747612-45747631 MsG0380013794.01.T01:CDS 45.0%
GGACTCAAACTTTATGACCC+TGG + Chr3:45750979-45750998 MsG0380013794.01.T01:CDS 45.0%
GGCCCAATGACCAATTAATC+AGG - Chr3:45750832-45750851 None:intergenic 45.0%
GGTGCAACCAAAAATACACG+AGG - Chr3:45748800-45748819 None:intergenic 45.0%
TAGAAGACATTGGGAGGAGA+GGG + Chr3:45749049-45749068 MsG0380013794.01.T01:intron 45.0%
TGTGTGGAGAAGTGGAGAAT+CGG - Chr3:45750138-45750157 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + Chr3:45748974-45748993 MsG0380013794.01.T01:intron 45.0%
! GTCAAGTTGTCGACACACTT+TGG - Chr3:45747390-45747409 None:intergenic 45.0%
! GTTTGAGAGTTTGGAGTGGA+AGG - Chr3:45749167-45749186 None:intergenic 45.0%
! TCAGCTTTACCACGGTGTTT+TGG + Chr3:45751835-45751854 MsG0380013794.01.T01:CDS 45.0%
!! AAGGTTAACTTGTGCCCTCA+AGG - Chr3:45750415-45750434 None:intergenic 45.0%
!! AGATGTGGTTCTAACTTGGC+AGG + Chr3:45748694-45748713 MsG0380013794.01.T01:intron 45.0%
!! CGACGTGTATTTTAGAAGGG+AGG + Chr3:45750032-45750051 MsG0380013794.01.T01:intron 45.0%
!! GCTGAGATGTGGTTCTAACT+TGG + Chr3:45748690-45748709 MsG0380013794.01.T01:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + Chr3:45748973-45748992 MsG0380013794.01.T01:intron 45.0%
!!! TTATGATATTTTATATAAAA+TGG - Chr3:45748860-45748879 None:intergenic 5.0%
!!! TTTTATTATAATTATGAATT+AGG + Chr3:45751595-45751614 MsG0380013794.01.T01:intron 5.0%
CACACATAATGTGTGTGGCC+TGG + Chr3:45750152-45750171 MsG0380013794.01.T01:intron 50.0%
CAGGCCACACACATTATGTG+TGG - Chr3:45750154-45750173 None:intergenic 50.0%
! AGAGTTTGGAGTGGAAGGGA+GGG - Chr3:45749162-45749181 None:intergenic 50.0%
!! GGATTGGCCCCCTGATTAAT+TGG + Chr3:45750819-45750838 MsG0380013794.01.T01:intron 50.0%
!! GGCTGAGAAAAGCACCTTTC+CGG + Chr3:45751095-45751114 MsG0380013794.01.T01:CDS 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + Chr3:45748972-45748991 MsG0380013794.01.T01:intron 50.0%
ACATTGGGAGGAGAGGGCTT+TGG + Chr3:45749055-45749074 MsG0380013794.01.T01:intron 55.0%
CATAACAGCAGGGCCATGTC+AGG - Chr3:45751652-45751671 None:intergenic 55.0%
CTGACATGGCCCTGCTGTTA+TGG + Chr3:45751650-45751669 MsG0380013794.01.T01:intron 55.0%
CTTTCTTGAGAACGTGCGCG+AGG + Chr3:45747956-45747975 MsG0380013794.01.T01:intron 55.0%
GTGCGCGAGGATTGGACATT+AGG + Chr3:45747969-45747988 MsG0380013794.01.T01:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + Chr3:45748978-45748997 MsG0380013794.01.T01:intron 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + Chr3:45748977-45748996 MsG0380013794.01.T01:intron 55.0%
TTGAGAACGTGCGCGAGGAT+TGG + Chr3:45747961-45747980 MsG0380013794.01.T01:intron 55.0%
TTGGAGTGGAAGGGAGGGAA+GGG - Chr3:45749157-45749176 None:intergenic 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + Chr3:45748979-45748998 MsG0380013794.01.T01:intron 55.0%
! AGACTCATGCTAGTGGACGG+TGG + Chr3:45750797-45750816 MsG0380013794.01.T01:intron 55.0%
! ATGCTAGTGGACGGTGGGAT+TGG + Chr3:45750803-45750822 MsG0380013794.01.T01:intron 55.0%
! GACTCATGCTAGTGGACGGT+GGG + Chr3:45750798-45750817 MsG0380013794.01.T01:intron 55.0%
! GAGAGTTTGGAGTGGAAGGG+AGG - Chr3:45749163-45749182 None:intergenic 55.0%
! TTTGGAGTGGAAGGGAGGGA+AGG - Chr3:45749158-45749177 None:intergenic 55.0%
AAGGGAGGGAAGGGGTTTGG+GGG - Chr3:45749148-45749167 None:intergenic 60.0%
GAAGGGAGGGAAGGGGTTTG+GGG - Chr3:45749149-45749168 None:intergenic 60.0%
GGAAGGGAGGGAAGGGGTTT+GGG - Chr3:45749150-45749169 None:intergenic 60.0%
GGTCATTGGGCCGGATATGC+TGG + Chr3:45750840-45750859 MsG0380013794.01.T01:intron 60.0%
TGGAAGGGAGGGAAGGGGTT+TGG - Chr3:45749151-45749170 None:intergenic 60.0%
TGGAGTGGAAGGGAGGGAAG+GGG - Chr3:45749156-45749175 None:intergenic 60.0%
! TTGGGAGGAGAGGGCTTTGG+AGG + Chr3:45749058-45749077 MsG0380013794.01.T01:intron 60.0%
AGGGAAGGGGTTTGGGGGGT+TGG - Chr3:45749143-45749162 None:intergenic 65.0%
AGGGAGGGAAGGGGTTTGGG+GGG - Chr3:45749147-45749166 None:intergenic 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG + Chr3:45748984-45749003 MsG0380013794.01.T01:intron 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG + Chr3:45748983-45749002 MsG0380013794.01.T01:intron 65.0%
! GGGAGGGGAGGGGATGGTTT+TGG + Chr3:45748999-45749018 MsG0380013794.01.T01:intron 65.0%
GGGAGTTTGGAGGGGAGGGG+AGG + Chr3:45748982-45749001 MsG0380013794.01.T01:intron 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG + Chr3:45748988-45749007 MsG0380013794.01.T01:intron 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG + Chr3:45748987-45749006 MsG0380013794.01.T01:intron 70.0%
TGGAGGGGAGGGGAGGGGAG+GGG + Chr3:45748989-45749008 MsG0380013794.01.T01:intron 75.0%
! GGGGAGGGGAGGGGAGGGGA+TGG + Chr3:45748993-45749012 MsG0380013794.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 45747213 45752659 45747213 ID=MsG0380013794.01;Name=MsG0380013794.01
Chr3 mRNA 45747213 45752659 45747213 ID=MsG0380013794.01.T01;Parent=MsG0380013794.01;Name=MsG0380013794.01.T01;_AED=0.50;_eAED=0.75;_QI=0|0|0|1|1|1|7|0|354
Chr3 exon 45747213 45747659 45747213 ID=MsG0380013794.01.T01:exon:4834;Parent=MsG0380013794.01.T01
Chr3 exon 45750955 45751135 45750955 ID=MsG0380013794.01.T01:exon:4835;Parent=MsG0380013794.01.T01
Chr3 exon 45751773 45751856 45751773 ID=MsG0380013794.01.T01:exon:4836;Parent=MsG0380013794.01.T01
Chr3 exon 45751937 45752005 45751937 ID=MsG0380013794.01.T01:exon:4837;Parent=MsG0380013794.01.T01
Chr3 exon 45752137 45752249 45752137 ID=MsG0380013794.01.T01:exon:4838;Parent=MsG0380013794.01.T01
Chr3 exon 45752406 45752478 45752406 ID=MsG0380013794.01.T01:exon:4839;Parent=MsG0380013794.01.T01
Chr3 exon 45752562 45752659 45752562 ID=MsG0380013794.01.T01:exon:4840;Parent=MsG0380013794.01.T01
Chr3 CDS 45747213 45747659 45747213 ID=MsG0380013794.01.T01:cds;Parent=MsG0380013794.01.T01
Chr3 CDS 45750955 45751135 45750955 ID=MsG0380013794.01.T01:cds;Parent=MsG0380013794.01.T01
Chr3 CDS 45751773 45751856 45751773 ID=MsG0380013794.01.T01:cds;Parent=MsG0380013794.01.T01
Chr3 CDS 45751937 45752005 45751937 ID=MsG0380013794.01.T01:cds;Parent=MsG0380013794.01.T01
Chr3 CDS 45752137 45752249 45752137 ID=MsG0380013794.01.T01:cds;Parent=MsG0380013794.01.T01
Chr3 CDS 45752406 45752478 45752406 ID=MsG0380013794.01.T01:cds;Parent=MsG0380013794.01.T01
Chr3 CDS 45752562 45752659 45752562 ID=MsG0380013794.01.T01:cds;Parent=MsG0380013794.01.T01
Gene Sequence

>MsG0380013794.01.T01

ATGAACTTGGGAGAAAATGAATTTTCTGGAAACATACCAATCATGACGTCACATAACTTAGTAGTGGTCATATTGAGAGCCAATCAATTTGAAGGGACTATTCCGCAACAACTATTCAATCTCTCTTATTTGTTTCACTTGGACCTTGCACATAATAAACTTTCAGATTCTGTGCCAAAGTGTGTCGACAACTTGACAGATATGGTTACTGATCATTCTATTACTTTTTATATTGCCACAATTGAGTTGTTTACAAAAGATCAAGATTATATTTATGAAGTCGAACCGGATAGGCGAACTATTGACCTTTCAGCCAATAACTTATTTGGAGAAGTGCCATCGGAATTGTTTCGGCTTGTTCAAGTTCAAACATTGAACTTATCTCACAATAATTTGACTGGAACAATTCCGAAGACGATTGGAGGCATGATAAATATGGAGTTTCAAATATCAACTGGGAAGAATGACAAGGGACTCAAACTTTATGACCCTGGATATTTAAACACTGCTCCTGTGCGATCAACAATTTCTTATATTGATGGTGATGAGGGGATCCTTAGATATAGAGGATACCCAATTGAGGAATTGGCTGAGAAAAGCACCTTTCCGGAAGTGTCATATCTCATATTGTATGGAAATTTGCCTTCTGCAAGTCAGTTACAAGAATGGGAGTTTGCTATATCTCAACACTCAGCTTTACCACGGTGTTTTGTGGCTGTTATTATCAGTATTAGTGTCGTAAACTTTTATGTTATGTATATGCCTCATTTTCTCAAGATAGGCTTCATAATTTCTCCTGCAATCACTATACAAAGTTCCTTTGTCATGAAATGGAGGCATGCATACTTTCGGTTTATTAATAGAGTAGGTGACAAACTCAATGTAACTTTGATGGTGGTTATTAATGTGGAAGATCCTGCATTTTTATGCAAATCGTGGAAGGTTACGAGTTGTATGAGACGAGATCGCCACAGAATGAATGCAATCATGTCGTCAACTGTTCTGCATATATCTCACTTTAATTATTGTACCAAATGTAGTGATTTTAGACAATCTTATAGATAG

Protein sequence

>MsG0380013794.01.T01

MNLGENEFSGNIPIMTSHNLVVVILRANQFEGTIPQQLFNLSYLFHLDLAHNKLSDSVPKCVDNLTDMVTDHSITFYIATIELFTKDQDYIYEVEPDRRTIDLSANNLFGEVPSELFRLVQVQTLNLSHNNLTGTIPKTIGGMINMEFQISTGKNDKGLKLYDPGYLNTAPVRSTISYIDGDEGILRYRGYPIEELAEKSTFPEVSYLILYGNLPSASQLQEWEFAISQHSALPRCFVAVIISISVVNFYVMYMPHFLKIGFIISPAITIQSSFVMKWRHAYFRFINRVGDKLNVTLMVVINVEDPAFLCKSWKVTSCMRRDRHRMNAIMSSTVLHISHFNYCTKCSDFRQSYR*