Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014027.01.T01 | KAH0644102.1 | 92.513 | 561 | 29 | 2 | 61 | 610 | 69 | 627 | 0 | 1063 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014027.01.T01 | Q8HVY4 | 96.577 | 409 | 14 | 0 | 20 | 428 | 142 | 550 | 0 | 818 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014027.01.T01 | A0A6A5L4T6 | 89.539 | 564 | 33 | 1 | 73 | 610 | 57 | 620 | 0.0 | 1025 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048691.01 | MsG0380014027.01 | 0.812916 | 3.332339e-51 | 2.145522e-48 |
| MsG0380013888.01 | MsG0380014027.01 | 0.827691 | 1.360611e-54 | 1.323127e-51 |
| MsG0380013890.01 | MsG0380014027.01 | 0.801089 | 1.061523e-48 | 5.025290e-46 |
| MsG0380013917.01 | MsG0380014027.01 | 0.833977 | 3.911801e-56 | 4.578896e-53 |
| MsG0380013918.01 | MsG0380014027.01 | 0.866358 | 3.023763e-65 | 1.016233e-61 |
| MsG0380013926.01 | MsG0380014027.01 | 0.824270 | 8.840643e-54 | 7.792649e-51 |
| MsG0380013931.01 | MsG0380014027.01 | 0.804071 | 2.575620e-49 | 1.315596e-46 |
| MsG0380013935.01 | MsG0380014027.01 | 0.817966 | 2.506701e-52 | 1.852063e-49 |
| MsG0380013936.01 | MsG0380014027.01 | 0.836962 | 6.881472e-57 | 8.810162e-54 |
| MsG0380013937.01 | MsG0380014027.01 | 0.806678 | 7.321237e-50 | 3.998000e-47 |
| MsG0380013941.01 | MsG0380014027.01 | 0.808799 | 2.593834e-50 | 1.497079e-47 |
| MsG0380013944.01 | MsG0380014027.01 | 0.816468 | 5.446389e-52 | 3.862183e-49 |
| MsG0380013952.01 | MsG0380014027.01 | 0.833045 | 6.683078e-56 | 7.607062e-53 |
| MsG0380013959.01 | MsG0380014027.01 | 0.861694 | 8.570107e-64 | 2.445269e-60 |
| MsG0380013961.01 | MsG0380014027.01 | 0.849073 | 4.085720e-60 | 7.655122e-57 |
| MsG0380013962.01 | MsG0380014027.01 | 0.833583 | 4.906705e-56 | 5.675156e-53 |
| MsG0380013964.01 | MsG0380014027.01 | 0.802861 | 4.589362e-49 | 2.272439e-46 |
| MsG0380013969.01 | MsG0380014027.01 | 0.825149 | 5.486141e-54 | 4.959987e-51 |
| MsG0380013972.01 | MsG0380014027.01 | 0.816827 | 4.523946e-52 | 3.239878e-49 |
| MsG0380013981.01 | MsG0380014027.01 | 0.833609 | 4.833444e-56 | 5.594635e-53 |
| MsG0380013983.01 | MsG0380014027.01 | 0.863403 | 2.552509e-64 | 7.728401e-61 |
| MsG0380013984.01 | MsG0380014027.01 | 0.805157 | 1.528820e-49 | 8.030110e-47 |
| MsG0380013991.01 | MsG0380014027.01 | 0.819526 | 1.108974e-52 | 8.555125e-50 |
| MsG0380014026.01 | MsG0380014027.01 | 0.806460 | 8.138854e-50 | 4.420165e-47 |
| MsG0380014027.01 | MsG0380014034.01 | 0.816013 | 6.881876e-52 | 4.820165e-49 |
| MsG0380014027.01 | MsG0380014035.01 | 0.846651 | 1.899989e-59 | 3.293123e-56 |
| MsG0380014027.01 | MsG0380014040.01 | 0.809464 | 1.868284e-50 | 1.097662e-47 |
| MsG0380014027.01 | MsG0380014044.01 | 0.830336 | 3.110571e-55 | 3.267637e-52 |
| MsG0380014027.01 | MsG0380014046.01 | 0.831692 | 1.445381e-55 | 1.580429e-52 |
| MsG0380014027.01 | MsG0380014054.01 | 0.844531 | 7.136905e-59 | 1.155605e-55 |
| MsG0380014027.01 | MsG0380014057.01 | 0.847090 | 1.440410e-59 | 2.532189e-56 |
| MsG0380014027.01 | MsG0780040316.01 | 0.871863 | 4.942295e-67 | 2.024139e-63 |
| MsG0380014027.01 | MsG0780040317.01 | 0.803160 | 3.979872e-49 | 1.985776e-46 |
| MsG0280007042.01 | MsG0380014027.01 | 0.824060 | 9.903644e-54 | 8.677905e-51 |
| MsG0280009733.01 | MsG0380014027.01 | 0.860179 | 2.473445e-63 | 6.702284e-60 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014027.01.T01 | MTR_0002s0510 | 80.163 | 615 | 96 | 2 | 20 | 610 | 1243 | 1855 | 0.0 | 995 |
| MsG0380014027.01.T01 | MTR_4g051130 | 98.837 | 430 | 3 | 1 | 1 | 428 | 1199 | 1628 | 0.0 | 871 |
| MsG0380014027.01.T01 | MTR_3g062770 | 98.837 | 430 | 3 | 1 | 1 | 428 | 147 | 576 | 0.0 | 867 |
| MsG0380014027.01.T01 | MTR_3g062790 | 98.837 | 430 | 3 | 1 | 1 | 428 | 147 | 576 | 0.0 | 867 |
| MsG0380014027.01.T01 | MTR_8g016510 | 84.661 | 339 | 6 | 2 | 90 | 428 | 1 | 293 | 0.0 | 560 |
| MsG0380014027.01.T01 | MTR_8g016520 | 96.703 | 182 | 6 | 0 | 429 | 610 | 7 | 188 | 1.94e-122 | 362 |
| MsG0380014027.01.T01 | MTR_4g051120 | 99.451 | 182 | 1 | 0 | 429 | 610 | 7 | 188 | 1.50e-116 | 378 |
| MsG0380014027.01.T01 | MTR_3g047940 | 93.939 | 132 | 8 | 0 | 151 | 282 | 5 | 136 | 4.04e-82 | 254 |
| MsG0380014027.01.T01 | MTR_4g009210 | 83.516 | 91 | 15 | 0 | 128 | 218 | 1 | 91 | 4.81e-42 | 151 |
| MsG0380014027.01.T01 | MTR_4g009210 | 57.600 | 125 | 19 | 1 | 305 | 429 | 108 | 198 | 1.66e-33 | 128 |
| MsG0380014027.01.T01 | MTR_2g080240 | 95.652 | 69 | 3 | 0 | 429 | 497 | 26 | 94 | 3.62e-39 | 139 |
| MsG0380014027.01.T01 | MTR_7g067760 | 81.013 | 79 | 15 | 0 | 95 | 173 | 6 | 84 | 7.34e-37 | 132 |
| MsG0380014027.01.T01 | MTR_3g047900 | 91.525 | 59 | 5 | 0 | 1 | 59 | 56 | 114 | 1.86e-31 | 118 |
| MsG0380014027.01.T01 | MTR_4g061800 | 28.247 | 308 | 191 | 6 | 140 | 423 | 248 | 549 | 7.54e-30 | 126 |
| MsG0380014027.01.T01 | MTR_4g061700 | 28.803 | 309 | 188 | 7 | 140 | 423 | 247 | 548 | 1.01e-29 | 126 |
| MsG0380014027.01.T01 | MTR_7g111800 | 94.444 | 54 | 3 | 0 | 50 | 103 | 20 | 73 | 3.13e-28 | 108 |
| MsG0380014027.01.T01 | MTR_5g023020 | 28.526 | 312 | 190 | 6 | 141 | 423 | 241 | 548 | 2.84e-23 | 105 |
| MsG0380014027.01.T01 | MTR_4g086290 | 25.949 | 316 | 183 | 7 | 151 | 423 | 317 | 624 | 6.03e-20 | 95.5 |
| MsG0380014027.01.T01 | MTR_4g086290 | 26.582 | 316 | 181 | 7 | 151 | 423 | 317 | 624 | 7.12e-20 | 95.1 |
| MsG0380014027.01.T01 | MTR_8g038990 | 28.053 | 303 | 186 | 10 | 145 | 422 | 233 | 528 | 1.93e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014027.01.T01 | ATCG00180 | 92.176 | 409 | 30 | 1 | 20 | 428 | 142 | 548 | 0.0 | 781 |
| MsG0380014027.01.T01 | ATCG00170 | 96.154 | 182 | 7 | 0 | 429 | 610 | 3 | 184 | 8.71e-112 | 365 |
| MsG0380014027.01.T01 | AT5G60040 | 28.710 | 310 | 188 | 5 | 141 | 423 | 250 | 553 | 8.95e-29 | 123 |
| MsG0380014027.01.T01 | AT5G60040 | 28.710 | 310 | 188 | 5 | 141 | 423 | 260 | 563 | 1.18e-28 | 122 |
| MsG0380014027.01.T01 | AT4G35800 | 28.710 | 310 | 192 | 5 | 141 | 423 | 242 | 549 | 1.94e-24 | 109 |
| MsG0380014027.01.T01 | AT4G35800 | 28.710 | 310 | 192 | 5 | 141 | 423 | 242 | 549 | 1.94e-24 | 109 |
| MsG0380014027.01.T01 | AT3G57660 | 24.806 | 387 | 215 | 12 | 151 | 491 | 335 | 691 | 3.94e-18 | 89.7 |
| MsG0380014027.01.T01 | AT3G57660 | 24.806 | 387 | 215 | 12 | 151 | 491 | 348 | 704 | 4.27e-18 | 89.4 |
| MsG0380014027.01.T01 | AT1G63020 | 23.978 | 367 | 238 | 10 | 79 | 422 | 152 | 500 | 1.34e-14 | 78.2 |
| MsG0380014027.01.T01 | AT1G63020 | 23.978 | 367 | 238 | 10 | 79 | 422 | 152 | 500 | 1.34e-14 | 78.2 |
| MsG0380014027.01.T01 | AT1G63020 | 23.978 | 367 | 238 | 10 | 79 | 422 | 152 | 500 | 1.37e-14 | 78.2 |
| MsG0380014027.01.T01 | AT1G63020 | 23.978 | 367 | 238 | 10 | 79 | 422 | 152 | 500 | 1.39e-14 | 78.2 |
| MsG0380014027.01.T01 | AT1G63020 | 27.604 | 192 | 123 | 3 | 247 | 422 | 1 | 192 | 2.40e-13 | 73.9 |
| MsG0380014027.01.T01 | AT2G40030 | 29.016 | 193 | 121 | 3 | 246 | 422 | 310 | 502 | 1.90e-11 | 68.2 |
| MsG0380014027.01.T01 | AT2G40030 | 29.016 | 193 | 121 | 3 | 246 | 422 | 310 | 502 | 2.00e-11 | 68.2 |
Find 133 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAACAACAAAGTTCTATTT+TGG | 0.177929 | 3:-48681766 | MsG0380014027.01.T01:CDS |
| TCTGGATTTAAGAATTATTA+TGG | 0.190370 | 3:-48683617 | MsG0380014027.01.T01:CDS |
| TCTGCTAATAAGTCGTTTAA+TGG | 0.223864 | 3:+48681938 | None:intergenic |
| ACCTCTTGTCTCCGGCTATT+GGG | 0.225839 | 3:-48682673 | MsG0380014027.01.T01:CDS |
| ATCCTCTCATTCCGACTAAT+TGG | 0.248879 | 3:+48681559 | None:intergenic |
| TGTTCATGTGCCTTTATCTT+TGG | 0.264426 | 3:-48682738 | MsG0380014027.01.T01:CDS |
| CCAACTCAAGATATGCTTAT+AGG | 0.271742 | 3:-48682635 | MsG0380014027.01.T01:CDS |
| CATTATATGGACTGGATTAA+AGG | 0.289410 | 3:+48681620 | None:intergenic |
| AACCTCTTGTCTCCGGCTAT+TGG | 0.290298 | 3:-48682674 | MsG0380014027.01.T01:CDS |
| GCACGTCCTTCTACTAAAAT+AGG | 0.292699 | 3:+48682824 | None:intergenic |
| TAGATCTACTTGTTGTTAAT+AGG | 0.299908 | 3:+48683302 | None:intergenic |
| GGGTCAGTCATCCTAAAATT+AGG | 0.301712 | 3:+48681642 | None:intergenic |
| AGCGCCTACTTTGCATAGAT+TGG | 0.308716 | 3:-48682864 | MsG0380014027.01.T01:CDS |
| CCTCCATCTATTTGAATAAT+CGG | 0.310599 | 3:+48683394 | None:intergenic |
| TTGGTAGAATGGAAAGAATT+AGG | 0.313946 | 3:-48683586 | MsG0380014027.01.T01:CDS |
| TTCTCGTAAATTGCTTTGAA+TGG | 0.322270 | 3:+48681500 | None:intergenic |
| TTTACATCCATTAGTGTGTA+AGG | 0.327520 | 3:-48682795 | MsG0380014027.01.T01:CDS |
| AACTTTGTTGTTCAGCATCT+TGG | 0.334259 | 3:+48681775 | None:intergenic |
| TACGCCAATCCATTGAAATA+TGG | 0.339395 | 3:-48681701 | MsG0380014027.01.T01:CDS |
| TTGAATAATCGGTCTCAATT+CGG | 0.341142 | 3:+48683405 | None:intergenic |
| GGAAAACGAGTTGATTATTC+GGG | 0.350240 | 3:-48683109 | MsG0380014027.01.T01:CDS |
| AGACCGATTATTCAAATAGA+TGG | 0.352617 | 3:-48683397 | MsG0380014027.01.T01:CDS |
| ACTGCTACATCTATTTCATT+AGG | 0.354727 | 3:-48681840 | MsG0380014027.01.T01:CDS |
| TGGAAAACGAGTTGATTATT+CGG | 0.358566 | 3:-48683110 | MsG0380014027.01.T01:CDS |
| ATCTTGAGTTGGTACGGAAA+TGG | 0.362284 | 3:+48682646 | None:intergenic |
| GGATACTGTATTTCCAAGAT+TGG | 0.364284 | 3:+48683728 | None:intergenic |
| TGAATAATCGGTCTCAATTC+GGG | 0.364643 | 3:+48683406 | None:intergenic |
| ATTATATGGACTGGATTAAA+GGG | 0.370361 | 3:+48681621 | None:intergenic |
| TGGACTAGCCATCCTTTAGA+AGG | 0.382153 | 3:+48681795 | None:intergenic |
| TTCCGCTAGTTAATACATAA+AGG | 0.382446 | 3:+48682612 | None:intergenic |
| TTGAATCCCTTACACACTAA+TGG | 0.385461 | 3:+48682788 | None:intergenic |
| GTGGATACACTCCTTGATAA+TGG | 0.387696 | 3:-48683232 | MsG0380014027.01.T01:CDS |
| TTTCAGACATTTCTAATTCG+TGG | 0.395006 | 3:-48683010 | MsG0380014027.01.T01:CDS |
| ACGAGAACAATTAGTTGATC+TGG | 0.400881 | 3:-48683635 | MsG0380014027.01.T01:CDS |
| GGCGCTCTATTCAGCAATAC+TGG | 0.401200 | 3:+48682881 | None:intergenic |
| AGACATAAAACCATCCATTC+TGG | 0.402557 | 3:+48683445 | None:intergenic |
| TGGATTCTTCGTTGGTAGAA+TGG | 0.407733 | 3:-48683597 | MsG0380014027.01.T01:CDS |
| GGATTCAATGCAGACTTTGA+TGG | 0.407959 | 3:-48682773 | MsG0380014027.01.T01:CDS |
| TCATGTGCCTTTATCTTTGG+AGG | 0.409231 | 3:-48682735 | MsG0380014027.01.T01:CDS |
| AGCAGATTAATAGACCATTT+CGG | 0.411046 | 3:-48681921 | MsG0380014027.01.T01:CDS |
| GCTTGAGCCTCCAAAGATAA+AGG | 0.413525 | 3:+48682728 | None:intergenic |
| TCGAATATGAAATCCAATCT+TGG | 0.418713 | 3:-48683741 | MsG0380014027.01.T01:CDS |
| GATTCAATGCAGACTTTGAT+GGG | 0.425961 | 3:-48682772 | MsG0380014027.01.T01:CDS |
| TCTTGAGTTGGTACGGAAAT+GGG | 0.426083 | 3:+48682647 | None:intergenic |
| CTCAATTCGGGAGGAAGAAC+TGG | 0.430438 | 3:+48683418 | None:intergenic |
| TCTCGTAAATTGCTTTGAAT+GGG | 0.433790 | 3:+48681501 | None:intergenic |
| ATTCTGGTTCTATATTTGTT+CGG | 0.435196 | 3:+48683461 | None:intergenic |
| TTATTATGACCGTCCCTCAT+TGG | 0.440271 | 3:+48683196 | None:intergenic |
| CATACCATATTTCAATGGAT+TGG | 0.443039 | 3:+48681697 | None:intergenic |
| TTTGCATAGATTGGGCATAC+AGG | 0.446557 | 3:-48682855 | MsG0380014027.01.T01:CDS |
| TGTAGCATACCATATTTCAA+TGG | 0.450731 | 3:+48681692 | None:intergenic |
| CTGGATCAAGTAAAGACTCT+AGG | 0.462436 | 3:-48681876 | MsG0380014027.01.T01:CDS |
| CACTGACAATGAAAATGAAT+GGG | 0.463118 | 3:-48683551 | MsG0380014027.01.T01:CDS |
| CTAGAGTCTTTACTTGATCC+AGG | 0.463607 | 3:+48681877 | None:intergenic |
| CCACTGACAATGAAAATGAA+TGG | 0.464389 | 3:-48683552 | MsG0380014027.01.T01:CDS |
| TGGAAAGAATTAGGAGAAGA+GGG | 0.467304 | 3:-48683577 | MsG0380014027.01.T01:CDS |
| GCGCCTACTTTGCATAGATT+GGG | 0.476543 | 3:-48682863 | MsG0380014027.01.T01:CDS |
| TGAAGTATTTCCCATACAAT+CGG | 0.477354 | 3:+48682923 | None:intergenic |
| CCTCTTGTCTCCGGCTATTG+GGG | 0.480180 | 3:-48682672 | MsG0380014027.01.T01:CDS |
| GGGCGTTCTGTTATTGTCGT+AGG | 0.483193 | 3:-48683088 | MsG0380014027.01.T01:CDS |
| AGAGAAATTTCTAGTGGAGC+AGG | 0.488408 | 3:-48683664 | MsG0380014027.01.T01:CDS |
| GTCTTTCACAATAACGTGAT+AGG | 0.489141 | 3:-48681969 | MsG0380014027.01.T01:CDS |
| GTTATTGTGAAAGACTAGAT+TGG | 0.489846 | 3:+48681977 | None:intergenic |
| TGGAGGGAAACTAATGAGTT+CGG | 0.494350 | 3:-48683377 | MsG0380014027.01.T01:CDS |
| GGCATATACATCACACATCC+TGG | 0.495134 | 3:-48681895 | MsG0380014027.01.T01:CDS |
| TAACAATACCTTCTAAAGGA+TGG | 0.495965 | 3:-48681803 | MsG0380014027.01.T01:CDS |
| CGAAATAGAGAAATTTCTAG+TGG | 0.496839 | 3:-48683670 | MsG0380014027.01.T01:CDS |
| TAGCTCTATTGCTATTTCGC+GGG | 0.496998 | 3:+48683033 | None:intergenic |
| AATTATTATGGATTCTTCGT+TGG | 0.499116 | 3:-48683605 | MsG0380014027.01.T01:CDS |
| TCATACAAACCTCTTGTCTC+CGG | 0.506883 | 3:-48682681 | MsG0380014027.01.T01:CDS |
| GAATGGGAAGATCGAAAAGT+AGG | 0.511851 | 3:-48683535 | MsG0380014027.01.T01:CDS |
| CCTCGTAATCGTAAGAAAGT+AGG | 0.512515 | 3:+48683769 | None:intergenic |
| AAATCAATCATTTGTCCTTG+TGG | 0.513235 | 3:+48681525 | None:intergenic |
| ATGGAAAGAATTAGGAGAAG+AGG | 0.513927 | 3:-48683578 | MsG0380014027.01.T01:CDS |
| ATAGCTCTATTGCTATTTCG+CGG | 0.516257 | 3:+48683032 | None:intergenic |
| TAGATGTAGCAGTAGCTTGA+CGG | 0.516966 | 3:+48681850 | None:intergenic |
| GAGTTGCTAAGAGTAAAATA+CGG | 0.520079 | 3:-48682955 | MsG0380014027.01.T01:CDS |
| AGATTTCGAGAGACTCTGCT+TGG | 0.523467 | 3:-48683130 | MsG0380014027.01.T01:CDS |
| ATGTATATGCCATTCCGAAA+TGG | 0.525535 | 3:+48681907 | None:intergenic |
| AGACTTTGATGGGGATCAAA+TGG | 0.531054 | 3:-48682762 | MsG0380014027.01.T01:CDS |
| GTCCGCGGATTCCATTATCA+AGG | 0.532137 | 3:+48683221 | None:intergenic |
| CCTATAAGCATATCTTGAGT+TGG | 0.532621 | 3:+48682635 | None:intergenic |
| TTGGATAGGATCCAATAAGA+TGG | 0.534215 | 3:+48683824 | None:intergenic |
| GAATATATAATTTCTTGCTA+CGG | 0.534554 | 3:-48681462 | MsG0380014027.01.T01:CDS |
| GATATAATTGAGGGCAAAGA+GGG | 0.535939 | 3:-48683154 | MsG0380014027.01.T01:CDS |
| TGGATCAAGTAAAGACTCTA+GGG | 0.538268 | 3:-48681875 | MsG0380014027.01.T01:CDS |
| AATACTTCAAGAAGTTATGC+GGG | 0.538847 | 3:-48682909 | MsG0380014027.01.T01:CDS |
| AAGCATATCTTGAGTTGGTA+CGG | 0.543078 | 3:+48682640 | None:intergenic |
| CCTTTGAAAATCGGACGTGA+GGG | 0.548394 | 3:+48683854 | None:intergenic |
| TGACACATTACTAATTCCCC+TGG | 0.549045 | 3:+48683277 | None:intergenic |
| GAACAAATATAGAACCAGAA+TGG | 0.550621 | 3:-48683459 | MsG0380014027.01.T01:CDS |
| CCCTTTGAAAATCGGACGTG+AGG | 0.550708 | 3:+48683853 | None:intergenic |
| AGTTGCTAAGAGTAAAATAC+GGG | 0.563519 | 3:-48682954 | MsG0380014027.01.T01:CDS |
| TTACATCCATTAGTGTGTAA+GGG | 0.565613 | 3:-48682794 | MsG0380014027.01.T01:CDS |
| AAATATAGAACCAGAATGGA+TGG | 0.566690 | 3:-48683455 | MsG0380014027.01.T01:CDS |
| TCTATAGAAGAGTTATCTAT+CGG | 0.571448 | 3:-48683342 | MsG0380014027.01.T01:CDS |
| CCGATTATTCAAATAGATGG+AGG | 0.576436 | 3:-48683394 | MsG0380014027.01.T01:CDS |
| ATGCCCAATCTATGCAAAGT+AGG | 0.578492 | 3:+48682860 | None:intergenic |
| CACCAATTAGTCGGAATGAG+AGG | 0.580106 | 3:-48681561 | MsG0380014027.01.T01:CDS |
| TCACTTTCATTACATCGATG+TGG | 0.585158 | 3:-48683061 | MsG0380014027.01.T01:CDS |
| ATTAATAGACCATTTCGGAA+TGG | 0.587547 | 3:-48681916 | MsG0380014027.01.T01:CDS |
| CCTACTTTCTTACGATTACG+AGG | 0.587628 | 3:-48683769 | MsG0380014027.01.T01:CDS |
| GAAATGGGATCCCCAATAGC+CGG | 0.587924 | 3:+48682662 | None:intergenic |
| GGCCTTTATGTATTAACTAG+CGG | 0.596927 | 3:-48682614 | MsG0380014027.01.T01:CDS |
| AAAATTGGTACAAGAAGCCG+TGG | 0.599616 | 3:-48683251 | MsG0380014027.01.T01:CDS |
| AGCTCTATTGCTATTTCGCG+GGG | 0.600779 | 3:+48683034 | None:intergenic |
| ATTCAAAGCAATTTACGAGA+AGG | 0.601229 | 3:-48681498 | MsG0380014027.01.T01:CDS |
| CTCCTTGATAATGGAATCCG+CGG | 0.604913 | 3:-48683223 | MsG0380014027.01.T01:CDS |
| AGATATAATTGAGGGCAAAG+AGG | 0.606620 | 3:-48683155 | MsG0380014027.01.T01:CDS |
| CATCGATGTAATGAAAGTGA+TGG | 0.607503 | 3:+48683064 | None:intergenic |
| TCTCAAGTGCACCAATTAGT+CGG | 0.615181 | 3:-48681570 | MsG0380014027.01.T01:CDS |
| CCCCAATAGCCGGAGACAAG+AGG | 0.615798 | 3:+48682672 | None:intergenic |
| ATTATCAAGGAGTGTATCCA+CGG | 0.619206 | 3:+48683234 | None:intergenic |
| AATCCGCGGACAACCAATGA+GGG | 0.620928 | 3:-48683209 | MsG0380014027.01.T01:CDS |
| AAATACTTTAGCCGGATGAG+AGG | 0.622971 | 3:-48683880 | None:intergenic |
| CGTCCCTCATTGGTTGTCCG+CGG | 0.625858 | 3:+48683206 | None:intergenic |
| AAATACTTCAAGAAGTTATG+CGG | 0.639489 | 3:-48682910 | MsG0380014027.01.T01:CDS |
| CGATTATTCAAATAGATGGA+GGG | 0.639639 | 3:-48683393 | MsG0380014027.01.T01:CDS |
| TTTCACAATAACGTGATAGG+TGG | 0.645396 | 3:-48681966 | MsG0380014027.01.T01:CDS |
| CGCGGACAACCAATGAGGGA+CGG | 0.650205 | 3:-48683205 | MsG0380014027.01.T01:CDS |
| ACAACAAGTAGATCTACACC+AGG | 0.661649 | 3:-48683295 | MsG0380014027.01.T01:CDS |
| ATTCAATGCAGACTTTGATG+GGG | 0.662689 | 3:-48682771 | MsG0380014027.01.T01:CDS |
| GAAAACGAGTTGATTATTCG+GGG | 0.664266 | 3:-48683108 | MsG0380014027.01.T01:CDS |
| GAATCCGCGGACAACCAATG+AGG | 0.667535 | 3:-48683210 | MsG0380014027.01.T01:CDS |
| TACTTCAAGAAGTTATGCGG+GGG | 0.669171 | 3:-48682907 | MsG0380014027.01.T01:CDS |
| TTATATGGACTGGATTAAAG+GGG | 0.684921 | 3:+48681622 | None:intergenic |
| ATACTTCAAGAAGTTATGCG+GGG | 0.687954 | 3:-48682908 | MsG0380014027.01.T01:CDS |
| TCAGTATGGGAATGTACATG+CGG | 0.691247 | 3:-48681733 | MsG0380014027.01.T01:CDS |
| CAACAAGTAGATCTACACCA+GGG | 0.701288 | 3:-48683294 | MsG0380014027.01.T01:CDS |
| AACAAGTAGATCTACACCAG+GGG | 0.706918 | 3:-48683293 | MsG0380014027.01.T01:CDS |
| GGATTAATGTCAGATCCACA+AGG | 0.711466 | 3:-48681540 | MsG0380014027.01.T01:CDS |
| ATAATCGGTCTCAATTCGGG+AGG | 0.712530 | 3:+48683409 | None:intergenic |
| TTAACTAGCGGAAATCGTCG+AGG | 0.734048 | 3:-48682602 | MsG0380014027.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATATATAATTTCTTGCTA+CGG | - | Chr3:48683837-48683856 | MsG0380014027.01.T01:CDS | 20.0% |
| !! | GTAAATTTATGTTATGATAC+TGG | - | Chr3:48683156-48683175 | MsG0380014027.01.T01:CDS | 20.0% |
| !! | GTACCTATTATGAAATTTAT+GGG | - | Chr3:48682962-48682981 | MsG0380014027.01.T01:CDS | 20.0% |
| !! | TCTGGATTTAAGAATTATTA+TGG | - | Chr3:48681682-48681701 | MsG0380014027.01.T01:CDS | 20.0% |
| !! | TTAGAATTTCTGCAATTAAA+TGG | + | Chr3:48682745-48682764 | None:intergenic | 20.0% |
| !!! | AAGAAATGAATCCTAATTTT+AGG | - | Chr3:48683646-48683665 | MsG0380014027.01.T01:CDS | 20.0% |
| ! | AAATACTTCAAGAAGTTATG+CGG | - | Chr3:48682389-48682408 | MsG0380014027.01.T01:intron | 25.0% |
| ! | AATGAATTTGAGTCAATGAT+TGG | + | Chr3:48683250-48683269 | None:intergenic | 25.0% |
| ! | AATTATTATGGATTCTTCGT+TGG | - | Chr3:48681694-48681713 | MsG0380014027.01.T01:CDS | 25.0% |
| ! | AGTAATGTGTCAAGAAAAAT+TGG | - | Chr3:48682033-48682052 | MsG0380014027.01.T01:intron | 25.0% |
| ! | ATAACATAAATTTACCTAGC+TGG | + | Chr3:48683151-48683170 | None:intergenic | 25.0% |
| ! | ATCATAGGAATTGCAAAAAA+AGG | + | Chr3:48682818-48682837 | None:intergenic | 25.0% |
| ! | ATGCCCATAAATTTCATAAT+AGG | + | Chr3:48682968-48682987 | None:intergenic | 25.0% |
| ! | ATGGTATCTAATCATATAGA+TGG | - | Chr3:48683112-48683131 | MsG0380014027.01.T01:CDS | 25.0% |
| ! | CGTGAATAAACATAAAGAAA+AGG | - | Chr3:48683217-48683236 | MsG0380014027.01.T01:CDS | 25.0% |
| ! | GGTACCTATTATGAAATTTA+TGG | - | Chr3:48682961-48682980 | MsG0380014027.01.T01:CDS | 25.0% |
| ! | TCATAGGAATTGCAAAAAAA+GGG | + | Chr3:48682817-48682836 | None:intergenic | 25.0% |
| ! | TCTATAGAAGAGTTATCTAT+CGG | - | Chr3:48681957-48681976 | MsG0380014027.01.T01:CDS | 25.0% |
| ! | TGATTAGATACCATATGAAT+AGG | + | Chr3:48683106-48683125 | None:intergenic | 25.0% |
| ! | TGGAAAAACATAATCAGTAT+GGG | - | Chr3:48683553-48683572 | MsG0380014027.01.T01:CDS | 25.0% |
| ! | TTGGAAAAACATAATCAGTA+TGG | - | Chr3:48683552-48683571 | MsG0380014027.01.T01:CDS | 25.0% |
| !! | ATCGTTTTCAGATATAATTG+AGG | - | Chr3:48682135-48682154 | MsG0380014027.01.T01:intron | 25.0% |
| !! | CTTTTAACAATACCTTCTAA+AGG | - | Chr3:48683492-48683511 | MsG0380014027.01.T01:CDS | 25.0% |
| !! | TAAATTTCGATAGTCCTTTT+TGG | - | Chr3:48682866-48682885 | MsG0380014027.01.T01:CDS | 25.0% |
| !! | TCGTTTTCAGATATAATTGA+GGG | - | Chr3:48682136-48682155 | MsG0380014027.01.T01:intron | 25.0% |
| !! | TGAACAACAAAGTTCTATTT+TGG | - | Chr3:48683533-48683552 | MsG0380014027.01.T01:CDS | 25.0% |
| !!! | AAAGTAGGTTTTTTAACTAC+GGG | + | Chr3:48681518-48681537 | None:intergenic | 25.0% |
| !!! | AGGAAGAAGAAAGAATTTTT+TGG | - | Chr3:48681784-48681803 | MsG0380014027.01.T01:CDS | 25.0% |
| !!! | ATTATATGGACTGGATTAAA+GGG | + | Chr3:48683681-48683700 | None:intergenic | 25.0% |
| !!! | ATTCTGGTTCTATATTTGTT+CGG | + | Chr3:48681841-48681860 | None:intergenic | 25.0% |
| !!! | GAAAGTAGGTTTTTTAACTA+CGG | + | Chr3:48681519-48681538 | None:intergenic | 25.0% |
| !!! | TAGATCTACTTGTTGTTAAT+AGG | + | Chr3:48682000-48682019 | None:intergenic | 25.0% |
| !!! | TTTCAACCTATTTTAGTAGA+AGG | - | Chr3:48682469-48682488 | MsG0380014027.01.T01:intron | 25.0% |
| AAAAGAAATATGACCAACAG+TGG | + | Chr3:48683043-48683062 | None:intergenic | 30.0% | |
| AAATATAGAACCAGAATGGA+TGG | - | Chr3:48681844-48681863 | MsG0380014027.01.T01:CDS | 30.0% | |
| AAATCAATCATTTGTCCTTG+TGG | + | Chr3:48683777-48683796 | None:intergenic | 30.0% | |
| AATACTTCAAGAAGTTATGC+GGG | - | Chr3:48682390-48682409 | MsG0380014027.01.T01:intron | 30.0% | |
| ACTGCTACATCTATTTCATT+AGG | - | Chr3:48683459-48683478 | MsG0380014027.01.T01:CDS | 30.0% | |
| AGACCGATTATTCAAATAGA+TGG | - | Chr3:48681902-48681921 | MsG0380014027.01.T01:CDS | 30.0% | |
| AGCAAACGAAAAATTTGGAT+AGG | + | Chr3:48681492-48681511 | None:intergenic | 30.0% | |
| AGCAGATTAATAGACCATTT+CGG | - | Chr3:48683378-48683397 | MsG0380014027.01.T01:CDS | 30.0% | |
| AGTTGCTAAGAGTAAAATAC+GGG | - | Chr3:48682345-48682364 | MsG0380014027.01.T01:intron | 30.0% | |
| ATATACATTAGAACCACTGT+TGG | - | Chr3:48683027-48683046 | MsG0380014027.01.T01:CDS | 30.0% | |
| ATTAATAGACCATTTCGGAA+TGG | - | Chr3:48683383-48683402 | MsG0380014027.01.T01:CDS | 30.0% | |
| ATTCAAAGCAATTTACGAGA+AGG | - | Chr3:48683801-48683820 | MsG0380014027.01.T01:CDS | 30.0% | |
| CACTGACAATGAAAATGAAT+GGG | - | Chr3:48681748-48681767 | MsG0380014027.01.T01:CDS | 30.0% | |
| CATACCATATTTCAATGGAT+TGG | + | Chr3:48683605-48683624 | None:intergenic | 30.0% | |
| CCTCCATCTATTTGAATAAT+CGG | + | Chr3:48681908-48681927 | None:intergenic | 30.0% | |
| CGATTATTCAAATAGATGGA+GGG | - | Chr3:48681906-48681925 | MsG0380014027.01.T01:CDS | 30.0% | |
| CTCCTGAAAAAGACATTATA+TGG | + | Chr3:48683695-48683714 | None:intergenic | 30.0% | |
| GAAAAAGACATTATATGGAC+TGG | + | Chr3:48683690-48683709 | None:intergenic | 30.0% | |
| GAAATTGAAGAAGCTATACA+AGG | - | Chr3:48683069-48683088 | MsG0380014027.01.T01:CDS | 30.0% | |
| GAACAAATATAGAACCAGAA+TGG | - | Chr3:48681840-48681859 | MsG0380014027.01.T01:CDS | 30.0% | |
| GAGTTGCTAAGAGTAAAATA+CGG | - | Chr3:48682344-48682363 | MsG0380014027.01.T01:intron | 30.0% | |
| GTTATTGTGAAAGACTAGAT+TGG | + | Chr3:48683325-48683344 | None:intergenic | 30.0% | |
| TCGAATATGAAATCCAATCT+TGG | - | Chr3:48681558-48681577 | MsG0380014027.01.T01:CDS | 30.0% | |
| TCTGCTAATAAGTCGTTTAA+TGG | + | Chr3:48683364-48683383 | None:intergenic | 30.0% | |
| TGTAGCATACCATATTTCAA+TGG | + | Chr3:48683610-48683629 | None:intergenic | 30.0% | |
| TTACATCCATTAGTGTGTAA+GGG | - | Chr3:48682505-48682524 | MsG0380014027.01.T01:intron | 30.0% | |
| TTCCGCTAGTTAATACATAA+AGG | + | Chr3:48682690-48682709 | None:intergenic | 30.0% | |
| TTGAATAATCGGTCTCAATT+CGG | + | Chr3:48681897-48681916 | None:intergenic | 30.0% | |
| TTGGTAGAATGGAAAGAATT+AGG | - | Chr3:48681713-48681732 | MsG0380014027.01.T01:CDS | 30.0% | |
| TTTACATCCATTAGTGTGTA+AGG | - | Chr3:48682504-48682523 | MsG0380014027.01.T01:intron | 30.0% | |
| TTTCAGACATTTCTAATTCG+TGG | - | Chr3:48682289-48682308 | MsG0380014027.01.T01:intron | 30.0% | |
| ! | AAACATTTTGCTTCGAACAT+AGG | - | Chr3:48682322-48682341 | MsG0380014027.01.T01:intron | 30.0% |
| ! | ATCCAAATTTTTCGTTTGCT+AGG | - | Chr3:48681492-48681511 | MsG0380014027.01.T01:CDS | 30.0% |
| ! | CGAAATAGAGAAATTTCTAG+TGG | - | Chr3:48681629-48681648 | MsG0380014027.01.T01:CDS | 30.0% |
| ! | GAAGTTCACTATGAATCTTT+TGG | - | Chr3:48682940-48682959 | MsG0380014027.01.T01:CDS | 30.0% |
| ! | GTCCATATAATGTCTTTTTC+AGG | - | Chr3:48683690-48683709 | MsG0380014027.01.T01:CDS | 30.0% |
| ! | TAACAATACCTTCTAAAGGA+TGG | - | Chr3:48683496-48683515 | MsG0380014027.01.T01:CDS | 30.0% |
| ! | TCTCGTAAATTGCTTTGAAT+GGG | + | Chr3:48683801-48683820 | None:intergenic | 30.0% |
| ! | TGAAGTATTTCCCATACAAT+CGG | + | Chr3:48682379-48682398 | None:intergenic | 30.0% |
| ! | TTCTCGTAAATTGCTTTGAA+TGG | + | Chr3:48683802-48683821 | None:intergenic | 30.0% |
| !! | CATTATATGGACTGGATTAA+AGG | + | Chr3:48683682-48683701 | None:intergenic | 30.0% |
| !! | TGGAAAACGAGTTGATTATT+CGG | - | Chr3:48682189-48682208 | MsG0380014027.01.T01:intron | 30.0% |
| !! | TTATATGGACTGGATTAAAG+GGG | + | Chr3:48683680-48683699 | None:intergenic | 30.0% |
| ACGAGAACAATTAGTTGATC+TGG | - | Chr3:48681664-48681683 | MsG0380014027.01.T01:CDS | 35.0% | |
| AGACATAAAACCATCCATTC+TGG | + | Chr3:48681857-48681876 | None:intergenic | 35.0% | |
| AGATATAATTGAGGGCAAAG+AGG | - | Chr3:48682144-48682163 | MsG0380014027.01.T01:intron | 35.0% | |
| ATAAGCTCCAATTGCATCAT+AGG | + | Chr3:48682833-48682852 | None:intergenic | 35.0% | |
| ATACTTCAAGAAGTTATGCG+GGG | - | Chr3:48682391-48682410 | MsG0380014027.01.T01:intron | 35.0% | |
| ATGGAAAGAATTAGGAGAAG+AGG | - | Chr3:48681721-48681740 | MsG0380014027.01.T01:CDS | 35.0% | |
| ATGTATATGCCATTCCGAAA+TGG | + | Chr3:48683395-48683414 | None:intergenic | 35.0% | |
| ATTCAATGCAGACTTTGATG+GGG | - | Chr3:48682528-48682547 | MsG0380014027.01.T01:intron | 35.0% | |
| CATCGATGTAATGAAAGTGA+TGG | + | Chr3:48682238-48682257 | None:intergenic | 35.0% | |
| CCAACTCAAGATATGCTTAT+AGG | - | Chr3:48682664-48682683 | MsG0380014027.01.T01:CDS | 35.0% | |
| CCACTGACAATGAAAATGAA+TGG | - | Chr3:48681747-48681766 | MsG0380014027.01.T01:CDS | 35.0% | |
| CCGATTATTCAAATAGATGG+AGG | - | Chr3:48681905-48681924 | MsG0380014027.01.T01:CDS | 35.0% | |
| CCTATAAGCATATCTTGAGT+TGG | + | Chr3:48682667-48682686 | None:intergenic | 35.0% | |
| CTTGAGTAGCAAAAAAGAGT+GGG | + | Chr3:48681595-48681614 | None:intergenic | 35.0% | |
| GATATAATTGAGGGCAAAGA+GGG | - | Chr3:48682145-48682164 | MsG0380014027.01.T01:intron | 35.0% | |
| GATTCAATGCAGACTTTGAT+GGG | - | Chr3:48682527-48682546 | MsG0380014027.01.T01:intron | 35.0% | |
| GATTCATAGTGAACTTCGAT+AGG | + | Chr3:48682937-48682956 | None:intergenic | 35.0% | |
| GGAAAAAGAACCGATTGTAT+GGG | - | Chr3:48682366-48682385 | MsG0380014027.01.T01:intron | 35.0% | |
| GGATACTGTATTTCCAAGAT+TGG | + | Chr3:48681574-48681593 | None:intergenic | 35.0% | |
| GGCCTTTATGTATTAACTAG+CGG | - | Chr3:48682685-48682704 | MsG0380014027.01.T01:CDS | 35.0% | |
| GTCTTTCACAATAACGTGAT+AGG | - | Chr3:48683330-48683349 | MsG0380014027.01.T01:CDS | 35.0% | |
| TACGCCAATCCATTGAAATA+TGG | - | Chr3:48683598-48683617 | MsG0380014027.01.T01:CDS | 35.0% | |
| TATGATACTGGCGTAAATTC+AGG | - | Chr3:48683168-48683187 | MsG0380014027.01.T01:CDS | 35.0% | |
| TCACTTTCATTACATCGATG+TGG | - | Chr3:48682238-48682257 | MsG0380014027.01.T01:intron | 35.0% | |
| TGAATAATCGGTCTCAATTC+GGG | + | Chr3:48681896-48681915 | None:intergenic | 35.0% | |
| TGCAATTCCTATGATGCAAT+TGG | - | Chr3:48682823-48682842 | MsG0380014027.01.T01:CDS | 35.0% | |
| TGGAAAGAATTAGGAGAAGA+GGG | - | Chr3:48681722-48681741 | MsG0380014027.01.T01:CDS | 35.0% | |
| TGGATCAAGTAAAGACTCTA+GGG | - | Chr3:48683424-48683443 | MsG0380014027.01.T01:CDS | 35.0% | |
| TGTTCATGTGCCTTTATCTT+TGG | - | Chr3:48682561-48682580 | MsG0380014027.01.T01:intron | 35.0% | |
| TTGAATCCCTTACACACTAA+TGG | + | Chr3:48682514-48682533 | None:intergenic | 35.0% | |
| TTGGATAGGATCCAATAAGA+TGG | + | Chr3:48681478-48681497 | None:intergenic | 35.0% | |
| TTTCACAATAACGTGATAGG+TGG | - | Chr3:48683333-48683352 | MsG0380014027.01.T01:CDS | 35.0% | |
| ! | ATTATCAAGGAGTGTATCCA+CGG | + | Chr3:48682068-48682087 | None:intergenic | 35.0% |
| ! | CCATTCATTTTCATTGTCAG+TGG | + | Chr3:48681750-48681769 | None:intergenic | 35.0% |
| ! | TTTTCTCGAGCCTATTCATA+TGG | - | Chr3:48683093-48683112 | MsG0380014027.01.T01:CDS | 35.0% |
| !! | AACTTTGTTGTTCAGCATCT+TGG | + | Chr3:48683527-48683546 | None:intergenic | 35.0% |
| !! | AAGCATATCTTGAGTTGGTA+CGG | + | Chr3:48682662-48682681 | None:intergenic | 35.0% |
| !! | ATAGCTCTATTGCTATTTCG+CGG | + | Chr3:48682270-48682289 | None:intergenic | 35.0% |
| !! | GAAAACGAGTTGATTATTCG+GGG | - | Chr3:48682191-48682210 | MsG0380014027.01.T01:intron | 35.0% |
| !! | GGAAAACGAGTTGATTATTC+GGG | - | Chr3:48682190-48682209 | MsG0380014027.01.T01:intron | 35.0% |
| AAAATTGGTACAAGAAGCCG+TGG | - | Chr3:48682048-48682067 | MsG0380014027.01.T01:intron | 40.0% | |
| AACAAGTAGATCTACACCAG+GGG | - | Chr3:48682006-48682025 | MsG0380014027.01.T01:intron | 40.0% | |
| ACAACAAGTAGATCTACACC+AGG | - | Chr3:48682004-48682023 | MsG0380014027.01.T01:intron | 40.0% | |
| AGACTTTGATGGGGATCAAA+TGG | - | Chr3:48682537-48682556 | MsG0380014027.01.T01:intron | 40.0% | |
| ATATTCCACTCAGTGGGATT+CGG | + | Chr3:48683279-48683298 | None:intergenic | 40.0% | |
| ATCCTCTCATTCCGACTAAT+TGG | + | Chr3:48683743-48683762 | None:intergenic | 40.0% | |
| ATGCCCAATCTATGCAAAGT+AGG | + | Chr3:48682442-48682461 | None:intergenic | 40.0% | |
| CAACAAGTAGATCTACACCA+GGG | - | Chr3:48682005-48682024 | MsG0380014027.01.T01:intron | 40.0% | |
| CCTACTTTCTTACGATTACG+AGG | - | Chr3:48681530-48681549 | MsG0380014027.01.T01:CDS | 40.0% | |
| CCTCGTAATCGTAAGAAAGT+AGG | + | Chr3:48681533-48681552 | None:intergenic | 40.0% | |
| CCTTGAGTAGCAAAAAAGAG+TGG | + | Chr3:48681596-48681615 | None:intergenic | 40.0% | |
| CTAGAGTCTTTACTTGATCC+AGG | + | Chr3:48683425-48683444 | None:intergenic | 40.0% | |
| CTGGATCAAGTAAAGACTCT+AGG | - | Chr3:48683423-48683442 | MsG0380014027.01.T01:CDS | 40.0% | |
| GAATGGGAAGATCGAAAAGT+AGG | - | Chr3:48681764-48681783 | MsG0380014027.01.T01:CDS | 40.0% | |
| GCACGTCCTTCTACTAAAAT+AGG | + | Chr3:48682478-48682497 | None:intergenic | 40.0% | |
| GGATTAATGTCAGATCCACA+AGG | - | Chr3:48683759-48683778 | MsG0380014027.01.T01:CDS | 40.0% | |
| GGATTCAATGCAGACTTTGA+TGG | - | Chr3:48682526-48682545 | MsG0380014027.01.T01:intron | 40.0% | |
| GGCCTAGCAAACGAAAAATT+TGG | + | Chr3:48681497-48681516 | None:intergenic | 40.0% | |
| GGGAAAAAGAACCGATTGTA+TGG | - | Chr3:48682365-48682384 | MsG0380014027.01.T01:intron | 40.0% | |
| GGGTCAGTCATCCTAAAATT+AGG | + | Chr3:48683660-48683679 | None:intergenic | 40.0% | |
| GTGGATACACTCCTTGATAA+TGG | - | Chr3:48682067-48682086 | MsG0380014027.01.T01:intron | 40.0% | |
| TACTTCAAGAAGTTATGCGG+GGG | - | Chr3:48682392-48682411 | MsG0380014027.01.T01:intron | 40.0% | |
| TAGATGTAGCAGTAGCTTGA+CGG | + | Chr3:48683452-48683471 | None:intergenic | 40.0% | |
| TCAGTATGGGAATGTACATG+CGG | - | Chr3:48683566-48683585 | MsG0380014027.01.T01:CDS | 40.0% | |
| TCATACAAACCTCTTGTCTC+CGG | - | Chr3:48682618-48682637 | MsG0380014027.01.T01:CDS | 40.0% | |
| TCATGTGCCTTTATCTTTGG+AGG | - | Chr3:48682564-48682583 | MsG0380014027.01.T01:intron | 40.0% | |
| TCTCAAGTGCACCAATTAGT+CGG | - | Chr3:48683729-48683748 | MsG0380014027.01.T01:CDS | 40.0% | |
| TGACACATTACTAATTCCCC+TGG | + | Chr3:48682025-48682044 | None:intergenic | 40.0% | |
| TGGAGGGAAACTAATGAGTT+CGG | - | Chr3:48681922-48681941 | MsG0380014027.01.T01:CDS | 40.0% | |
| TTATTATGACCGTCCCTCAT+TGG | + | Chr3:48682106-48682125 | None:intergenic | 40.0% | |
| TTTGCATAGATTGGGCATAC+AGG | - | Chr3:48682444-48682463 | MsG0380014027.01.T01:intron | 40.0% | |
| ! | TGGATTCTTCGTTGGTAGAA+TGG | - | Chr3:48681702-48681721 | MsG0380014027.01.T01:CDS | 40.0% |
| !! | AGAGAAATTTCTAGTGGAGC+AGG | - | Chr3:48681635-48681654 | MsG0380014027.01.T01:CDS | 40.0% |
| !! | ATCTTGAGTTGGTACGGAAA+TGG | + | Chr3:48682656-48682675 | None:intergenic | 40.0% |
| !! | GTGGAATATGGAGGTACTTA+TGG | - | Chr3:48683290-48683309 | MsG0380014027.01.T01:CDS | 40.0% |
| !! | TAGCTCTATTGCTATTTCGC+GGG | + | Chr3:48682269-48682288 | None:intergenic | 40.0% |
| !! | TCTTGAGTTGGTACGGAAAT+GGG | + | Chr3:48682655-48682674 | None:intergenic | 40.0% |
| !!! | ATGTCTTTTTCAGGAGCTAG+AGG | - | Chr3:48683699-48683718 | MsG0380014027.01.T01:CDS | 40.0% |
| !!! | CCACTCTTTTTTGCTACTCA+AGG | - | Chr3:48681593-48681612 | MsG0380014027.01.T01:CDS | 40.0% |
| !!! | GAATTTTTTGGTTCGACGCA+TGG | - | Chr3:48681796-48681815 | MsG0380014027.01.T01:CDS | 40.0% |
| AAGGGGGAGATCCATCTTAT+TGG | - | Chr3:48681464-48681483 | MsG0380014027.01.T01:CDS | 45.0% | |
| ACCTCCATATTCCACTCAGT+GGG | + | Chr3:48683285-48683304 | None:intergenic | 45.0% | |
| AGATTTCGAGAGACTCTGCT+TGG | - | Chr3:48682169-48682188 | MsG0380014027.01.T01:intron | 45.0% | |
| AGCGCCTACTTTGCATAGAT+TGG | - | Chr3:48682435-48682454 | MsG0380014027.01.T01:intron | 45.0% | |
| ATAATCGGTCTCAATTCGGG+AGG | + | Chr3:48681893-48681912 | None:intergenic | 45.0% | |
| CACCAATTAGTCGGAATGAG+AGG | - | Chr3:48683738-48683757 | MsG0380014027.01.T01:CDS | 45.0% | |
| GAATCCCACTGAGTGGAATA+TGG | - | Chr3:48683278-48683297 | MsG0380014027.01.T01:CDS | 45.0% | |
| GCGCCTACTTTGCATAGATT+GGG | - | Chr3:48682436-48682455 | MsG0380014027.01.T01:intron | 45.0% | |
| GCTTGAGCCTCCAAAGATAA+AGG | + | Chr3:48682574-48682593 | None:intergenic | 45.0% | |
| GGCATATACATCACACATCC+TGG | - | Chr3:48683404-48683423 | MsG0380014027.01.T01:CDS | 45.0% | |
| TACCTCCATATTCCACTCAG+TGG | + | Chr3:48683286-48683305 | None:intergenic | 45.0% | |
| TTAACTAGCGGAAATCGTCG+AGG | - | Chr3:48682697-48682716 | MsG0380014027.01.T01:CDS | 45.0% | |
| ! | CCTCACGTCCGATTTTCAAA+GGG | - | Chr3:48681446-48681465 | MsG0380014027.01.T01:CDS | 45.0% |
| ! | CCTTTGAAAATCGGACGTGA+GGG | + | Chr3:48681448-48681467 | None:intergenic | 45.0% |
| ! | CTCACGTCCGATTTTCAAAG+GGG | - | Chr3:48681447-48681466 | MsG0380014027.01.T01:CDS | 45.0% |
| ! | GGATCTCCCCCTTTGAAAAT+CGG | + | Chr3:48681457-48681476 | None:intergenic | 45.0% |
| ! | GTCGAGGTATTTGTGCAAAC+AGG | - | Chr3:48682713-48682732 | MsG0380014027.01.T01:CDS | 45.0% |
| ! | TCACGTCCGATTTTCAAAGG+GGG | - | Chr3:48681448-48681467 | MsG0380014027.01.T01:CDS | 45.0% |
| ! | TGCATTGATCTATTCGCCAC+CGG | + | Chr3:48682894-48682913 | None:intergenic | 45.0% |
| !! | AGCTCTATTGCTATTTCGCG+GGG | + | Chr3:48682268-48682287 | None:intergenic | 45.0% |
| !! | CTCCTTGATAATGGAATCCG+CGG | - | Chr3:48682076-48682095 | MsG0380014027.01.T01:intron | 45.0% |
| !! | GCTAGTGTTGATATCCAGCT+AGG | - | Chr3:48683134-48683153 | MsG0380014027.01.T01:CDS | 45.0% |
| !! | TGGACTAGCCATCCTTTAGA+AGG | + | Chr3:48683507-48683526 | None:intergenic | 45.0% |
| !! | TGGAGGTACTTATGGCAGAA+CGG | - | Chr3:48683298-48683317 | MsG0380014027.01.T01:CDS | 45.0% |
| !!! | TCGATAGTCCTTTTTGGCTC+CGG | - | Chr3:48682872-48682891 | MsG0380014027.01.T01:CDS | 45.0% |
| AACCTCTTGTCTCCGGCTAT+TGG | - | Chr3:48682625-48682644 | MsG0380014027.01.T01:CDS | 50.0% | |
| AATCCGCGGACAACCAATGA+GGG | - | Chr3:48682090-48682109 | MsG0380014027.01.T01:intron | 50.0% | |
| ACCTCTTGTCTCCGGCTATT+GGG | - | Chr3:48682626-48682645 | MsG0380014027.01.T01:CDS | 50.0% | |
| CTCAATTCGGGAGGAAGAAC+TGG | + | Chr3:48681884-48681903 | None:intergenic | 50.0% | |
| GAAATGGGATCCCCAATAGC+CGG | + | Chr3:48682640-48682659 | None:intergenic | 50.0% | |
| GGCGCTCTATTCAGCAATAC+TGG | + | Chr3:48682421-48682440 | None:intergenic | 50.0% | |
| GGGCGTTCTGTTATTGTCGT+AGG | - | Chr3:48682211-48682230 | MsG0380014027.01.T01:intron | 50.0% | |
| GTCCGCGGATTCCATTATCA+AGG | + | Chr3:48682081-48682100 | None:intergenic | 50.0% | |
| TCCCACTGAGTGGAATATGG+AGG | - | Chr3:48683281-48683300 | MsG0380014027.01.T01:CDS | 50.0% | |
| ! | CCCTCACGTCCGATTTTCAA+AGG | - | Chr3:48681445-48681464 | MsG0380014027.01.T01:CDS | 50.0% |
| ! | CCCTTTGAAAATCGGACGTG+AGG | + | Chr3:48681449-48681468 | None:intergenic | 50.0% |
| !! | GGAGGTACTTATGGCAGAAC+GGG | - | Chr3:48683299-48683318 | MsG0380014027.01.T01:CDS | 50.0% |
| !!! | ATAGTCCTTTTTGGCTCCGG+TGG | - | Chr3:48682875-48682894 | MsG0380014027.01.T01:CDS | 50.0% |
| ATTCGCCACCGGAGCCAAAA+AGG | + | Chr3:48682883-48682902 | None:intergenic | 55.0% | |
| CCTCTTGTCTCCGGCTATTG+GGG | - | Chr3:48682627-48682646 | MsG0380014027.01.T01:CDS | 55.0% | |
| GAATCCGCGGACAACCAATG+AGG | - | Chr3:48682089-48682108 | MsG0380014027.01.T01:intron | 55.0% | |
| TCGAACCGAATCCCACTGAG+TGG | - | Chr3:48683271-48683290 | MsG0380014027.01.T01:CDS | 55.0% | |
| CCCCAATAGCCGGAGACAAG+AGG | + | Chr3:48682630-48682649 | None:intergenic | 60.0% | |
| CGCGGACAACCAATGAGGGA+CGG | - | Chr3:48682094-48682113 | MsG0380014027.01.T01:intron | 60.0% | |
| ! | CGTCCCTCATTGGTTGTCCG+CGG | + | Chr3:48682096-48682115 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 48681434 | 48683887 | 48681434 | ID=MsG0380014027.01;Name=MsG0380014027.01 |
| Chr3 | mRNA | 48681434 | 48683887 | 48681434 | ID=MsG0380014027.01.T01;Parent=MsG0380014027.01;Name=MsG0380014027.01.T01;_AED=0.50;_eAED=0.66;_QI=0|0|0|1|1|1|2|0|618 |
| Chr3 | exon | 48682603 | 48683887 | 48682603 | ID=MsG0380014027.01.T01:exon:56981;Parent=MsG0380014027.01.T01 |
| Chr3 | exon | 48681434 | 48682005 | 48681434 | ID=MsG0380014027.01.T01:exon:56980;Parent=MsG0380014027.01.T01 |
| Chr3 | CDS | 48682603 | 48683887 | 48682603 | ID=MsG0380014027.01.T01:cds;Parent=MsG0380014027.01.T01 |
| Chr3 | CDS | 48681434 | 48682005 | 48681434 | ID=MsG0380014027.01.T01:cds;Parent=MsG0380014027.01.T01 |
| Gene Sequence |
| Protein sequence |
