Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013890.01.T01 | AES86351.1 | 97.849 | 93 | 2 | 0 | 6 | 98 | 145 | 237 | 2.17E-58 | 189 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013890.01.T01 | P03938 | 81.967 | 61 | 9 | 1 | 37 | 97 | 51 | 109 | 1.62E-26 | 97.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013890.01.T01 | G7JVL4 | 97.849 | 93 | 2 | 0 | 6 | 98 | 145 | 237 | 1.04e-58 | 189 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048692.01 | MsG0380013890.01 | 0.857348 | 1.735084e-62 | 4.269646e-59 |
| MsG0080048693.01 | MsG0380013890.01 | 0.849054 | 4.135625e-60 | 7.743699e-57 |
| MsG0080048694.01 | MsG0380013890.01 | 0.844983 | 5.390094e-59 | 8.853294e-56 |
| MsG0080048695.01 | MsG0380013890.01 | 0.844637 | 6.683173e-59 | 1.085677e-55 |
| MsG0080048697.01 | MsG0380013890.01 | 0.850341 | 1.807474e-60 | 3.529154e-57 |
| MsG0080048698.01 | MsG0380013890.01 | 0.812658 | 3.794865e-51 | 2.426851e-48 |
| MsG0080048699.01 | MsG0380013890.01 | 0.814707 | 1.343188e-51 | 9.078298e-49 |
| MsG0080049076.01 | MsG0380013890.01 | 0.842673 | 2.239312e-58 | 3.420102e-55 |
| MsG0180001507.01 | MsG0380013890.01 | 0.932017 | 1.598654e-94 | 1.046921e-89 |
| MsG0180002214.01 | MsG0380013890.01 | 0.817044 | 4.043263e-52 | 2.913043e-49 |
| MsG0180002439.01 | MsG0380013890.01 | 0.903983 | 1.971620e-79 | 2.986278e-75 |
| MsG0180002546.01 | MsG0380013890.01 | 0.831642 | 1.487247e-55 | 1.623734e-52 |
| MsG0180004300.01 | MsG0380013890.01 | -0.816726 | 4.765537e-52 | 3.403467e-49 |
| MsG0180004507.01 | MsG0380013890.01 | 0.805784 | 1.129588e-49 | 6.029627e-47 |
| MsG0180004586.01 | MsG0380013890.01 | 0.816292 | 5.960983e-52 | 4.207364e-49 |
| MsG0180004761.01 | MsG0380013890.01 | 0.825846 | 3.752540e-54 | 3.460602e-51 |
| MsG0180005817.01 | MsG0380013890.01 | 0.802301 | 5.988036e-49 | 2.923131e-46 |
| MsG0280010695.01 | MsG0380013890.01 | 0.807859 | 4.113798e-50 | 2.316490e-47 |
| MsG0280011403.01 | MsG0380013890.01 | -0.802830 | 4.656486e-49 | 2.304060e-46 |
| MsG0380013888.01 | MsG0380013890.01 | 0.801770 | 7.697786e-49 | 3.707035e-46 |
| MsG0380013890.01 | MsG0380013891.01 | 0.836128 | 1.121691e-56 | 1.400522e-53 |
| MsG0380013890.01 | MsG0380013892.01 | 0.920685 | 9.349576e-88 | 3.213072e-83 |
| MsG0380013890.01 | MsG0380013926.01 | 0.814535 | 1.466210e-51 | 9.864254e-49 |
| MsG0380013890.01 | MsG0380013928.01 | 0.836741 | 7.833382e-57 | 9.962469e-54 |
| MsG0380013890.01 | MsG0380013934.01 | 0.803410 | 3.532488e-49 | 1.773883e-46 |
| MsG0380013890.01 | MsG0380013940.01 | 0.874594 | 5.978711e-68 | 2.706919e-64 |
| MsG0380013890.01 | MsG0380013941.01 | 0.805025 | 1.628674e-49 | 8.525539e-47 |
| MsG0380013890.01 | MsG0380013942.01 | 0.831768 | 1.384115e-55 | 1.517031e-52 |
| MsG0380013890.01 | MsG0380013943.01 | 0.871675 | 5.702544e-67 | 2.320155e-63 |
| MsG0380013890.01 | MsG0380013945.01 | 0.856569 | 2.944750e-62 | 7.059535e-59 |
| MsG0380013890.01 | MsG0380013951.01 | 0.815855 | 7.464935e-52 | 5.205612e-49 |
| MsG0380013890.01 | MsG0380013953.01 | 0.860864 | 1.533873e-63 | 4.254777e-60 |
| MsG0380013890.01 | MsG0380013954.01 | 0.830263 | 3.240037e-55 | 3.396545e-52 |
| MsG0380013890.01 | MsG0380013956.01 | 0.827903 | 1.209371e-54 | 1.183430e-51 |
| MsG0380013890.01 | MsG0380013957.01 | 0.864490 | 1.171262e-64 | 3.684070e-61 |
| MsG0380013890.01 | MsG0380013961.01 | 0.860475 | 2.012495e-63 | 5.508469e-60 |
| MsG0380013890.01 | MsG0380013962.01 | 0.834605 | 2.721477e-56 | 3.245891e-53 |
| MsG0380013890.01 | MsG0380013966.01 | 0.849502 | 3.103485e-60 | 5.895335e-57 |
| MsG0380013890.01 | MsG0380013967.01 | 0.864212 | 1.430541e-64 | 4.455691e-61 |
| MsG0380013890.01 | MsG0380013968.01 | 0.811112 | 8.237852e-51 | 5.055698e-48 |
| MsG0380013890.01 | MsG0380013971.01 | 0.848789 | 4.899089e-60 | 9.093984e-57 |
| MsG0380013890.01 | MsG0380013975.01 | 0.843120 | 1.703768e-58 | 2.638780e-55 |
| MsG0380013890.01 | MsG0380013977.01 | 0.862306 | 5.562837e-64 | 1.621546e-60 |
| MsG0380013890.01 | MsG0380013984.01 | 0.925590 | 1.493035e-90 | 6.711229e-86 |
| MsG0380013890.01 | MsG0380013985.01 | 0.855067 | 8.089340e-62 | 1.844695e-58 |
| MsG0380013890.01 | MsG0380013986.01 | 0.909107 | 8.204198e-82 | 1.570844e-77 |
| MsG0380013890.01 | MsG0380013997.01 | 0.894968 | 1.496284e-75 | 1.521547e-71 |
| MsG0380013890.01 | MsG0380013999.01 | 0.814211 | 1.729508e-51 | 1.153312e-48 |
| MsG0380013890.01 | MsG0380014005.01 | 0.845314 | 4.387742e-59 | 7.283236e-56 |
| MsG0380013890.01 | MsG0380014006.01 | 0.865527 | 5.537088e-65 | 1.807240e-61 |
| MsG0380013890.01 | MsG0380014016.01 | 0.882470 | 1.014456e-70 | 6.186915e-67 |
| MsG0380013890.01 | MsG0380014017.01 | 0.829540 | 4.862306e-55 | 4.991030e-52 |
| MsG0380013890.01 | MsG0380014018.01 | 0.815645 | 8.312887e-52 | 5.764286e-49 |
| MsG0380013890.01 | MsG0380014021.01 | 0.807863 | 4.106788e-50 | 2.312759e-47 |
| MsG0380013890.01 | MsG0380014023.01 | 0.830963 | 2.184148e-55 | 2.337019e-52 |
| MsG0380013890.01 | MsG0380014024.01 | 0.817575 | 3.071972e-52 | 2.245485e-49 |
| MsG0380013890.01 | MsG0380014026.01 | 0.835063 | 2.086526e-56 | 2.522760e-53 |
| MsG0380013890.01 | MsG0380014027.01 | 0.801089 | 1.061523e-48 | 5.025290e-46 |
| MsG0380013890.01 | MsG0380014029.01 | 0.843969 | 1.010557e-58 | 1.607671e-55 |
| MsG0380013890.01 | MsG0380014031.01 | 0.804234 | 2.381784e-49 | 1.221583e-46 |
| MsG0380013890.01 | MsG0380014032.01 | 0.843250 | 1.572762e-58 | 2.446054e-55 |
| MsG0380013890.01 | MsG0380014033.01 | 0.843542 | 1.314704e-58 | 2.063722e-55 |
| MsG0380013890.01 | MsG0380014054.01 | 0.819823 | 9.485287e-53 | 7.378297e-50 |
| MsG0380013890.01 | MsG0380014057.01 | 0.836003 | 1.206934e-56 | 1.501182e-53 |
| MsG0380013890.01 | MsG0380016008.01 | -0.806876 | 6.649652e-50 | 3.650044e-47 |
| MsG0380013890.01 | MsG0380016424.01 | 0.810661 | 1.031708e-50 | 6.256241e-48 |
| MsG0380013890.01 | MsG0380017007.01 | 0.812886 | 3.382472e-51 | 2.176162e-48 |
| MsG0380013890.01 | MsG0380017904.01 | 0.803271 | 3.775602e-49 | 1.889163e-46 |
| MsG0380013890.01 | MsG0480018296.01 | 0.822602 | 2.170284e-53 | 1.825214e-50 |
| MsG0380013890.01 | MsG0480019028.01 | 0.884518 | 1.791646e-71 | 1.185469e-67 |
| MsG0380013890.01 | MsG0480020051.01 | 0.851516 | 8.435999e-61 | 1.711743e-57 |
| MsG0380013890.01 | MsG0480020052.01 | 0.875355 | 3.289704e-68 | 1.531005e-64 |
| MsG0380013890.01 | MsG0480021912.01 | 0.816149 | 6.417596e-52 | 4.511667e-49 |
| MsG0380013890.01 | MsG0580024570.01 | 0.803779 | 2.962707e-49 | 1.501905e-46 |
| MsG0380013890.01 | MsG0580025572.01 | -0.805025 | 1.629265e-49 | 8.528454e-47 |
| MsG0380013890.01 | MsG0580027641.01 | -0.824207 | 9.144385e-54 | 8.046551e-51 |
| MsG0380013890.01 | MsG0580027677.01 | 0.859869 | 3.067843e-63 | 8.224056e-60 |
| MsG0380013890.01 | MsG0580029583.01 | -0.814844 | 1.252406e-51 | 8.496089e-49 |
| MsG0380013890.01 | MsG0680030439.01 | 0.808203 | 3.476315e-50 | 1.975514e-47 |
| MsG0380013890.01 | MsG0680030961.01 | -0.811449 | 6.960981e-51 | 4.310297e-48 |
| MsG0380013890.01 | MsG0780036068.01 | 0.815801 | 7.675836e-52 | 5.345204e-49 |
| MsG0380013890.01 | MsG0780040060.01 | -0.804315 | 2.291945e-49 | 1.177983e-46 |
| MsG0380013890.01 | MsG0780041007.01 | 0.812085 | 5.063344e-51 | 3.188785e-48 |
| MsG0380013890.01 | MsG0780041173.01 | 0.813952 | 1.972668e-51 | 1.306281e-48 |
| MsG0380013890.01 | MsG0880043983.01 | -0.801175 | 1.019026e-48 | 4.834426e-46 |
| MsG0380013890.01 | MsG0880045256.01 | -0.817606 | 3.023102e-52 | 2.211678e-49 |
| MsG0380013890.01 | MsG0880045861.01 | -0.802368 | 5.799741e-49 | 2.836072e-46 |
| MsG0380013890.01 | MsG0880046251.01 | 0.812935 | 3.299679e-51 | 2.125595e-48 |
| MsG0280007233.01 | MsG0380013890.01 | 0.805002 | 1.647377e-49 | 8.618289e-47 |
| MsG0280010142.01 | MsG0380013890.01 | 0.845553 | 3.780984e-59 | 6.323957e-56 |
| MsG0280010143.01 | MsG0380013890.01 | 0.845964 | 2.923366e-59 | 4.955528e-56 |
| MsG0280010144.01 | MsG0380013890.01 | 0.847591 | 1.049496e-59 | 1.874565e-56 |
| MsG0280010145.01 | MsG0380013890.01 | 0.821538 | 3.827740e-53 | 3.122825e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013890.01.T01 | MTR_4g006040 | 97.849 | 93 | 2 | 0 | 6 | 98 | 145 | 237 | 2.63e-62 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 40 sgRNAs with CRISPR-Local
Find 41 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGATCACCTCCTTCATTC+TGG | 0.237719 | 3:+47526571 | MsG0380013890.01.T01:CDS |
| TCGTGGGATCCGGGCGGTCC+AGG | 0.255275 | 3:+47526398 | MsG0380013890.01.T01:CDS |
| GAGGATAGATGGGGCGATTC+AGG | 0.280696 | 3:+47526342 | MsG0380013890.01.T01:CDS |
| TTCTATTCACTCGTGGGATC+CGG | 0.285661 | 3:+47526388 | MsG0380013890.01.T01:CDS |
| ATATATCCCTTATCAGTATA+TGG | 0.331456 | 3:+47526456 | MsG0380013890.01.T01:CDS |
| TATCTCTCGAGCACAGGTTT+AGG | 0.344757 | 3:+47526484 | MsG0380013890.01.T01:CDS |
| CTTCTCCTCAGGAGGATAGA+TGG | 0.346630 | 3:+47526331 | MsG0380013890.01.T01:CDS |
| TATCCTCCTGAGGAGAAGTT+TGG | 0.356300 | 3:-47526326 | None:intergenic |
| GTGGGATCCGGGCGGTCCAG+GGG | 0.385871 | 3:+47526400 | MsG0380013890.01.T01:CDS |
| TGGGATCCGGGCGGTCCAGG+GGG | 0.394291 | 3:+47526401 | MsG0380013890.01.T01:CDS |
| CTCGAGCACAGGTTTAGGTT+TGG | 0.395333 | 3:+47526489 | MsG0380013890.01.T01:CDS |
| CGTGGGATCCGGGCGGTCCA+GGG | 0.409711 | 3:+47526399 | MsG0380013890.01.T01:CDS |
| GAGATCACCTCCTTCATTCT+GGG | 0.425918 | 3:+47526572 | MsG0380013890.01.T01:CDS |
| TTCTCCTCAGGAGGATAGAT+GGG | 0.436019 | 3:+47526332 | MsG0380013890.01.T01:CDS |
| GGAGGTGATCTCGTAGTTCT+TGG | 0.438808 | 3:-47526561 | None:intergenic |
| AGCTGTCCATATACTGATAA+GGG | 0.448121 | 3:-47526462 | None:intergenic |
| TAGCTGTCCATATACTGATA+AGG | 0.448263 | 3:-47526463 | None:intergenic |
| CTTCATTCTGGGGTGACGGC+GGG | 0.455494 | 3:+47526583 | MsG0380013890.01.T01:CDS |
| TTGAAACCAAACTTCTCCTC+AGG | 0.463068 | 3:+47526320 | None:intergenic |
| TCTATTCACTCGTGGGATCC+GGG | 0.481377 | 3:+47526389 | MsG0380013890.01.T01:CDS |
| GTCTGTGAAGATACGTTGTT+AGG | 0.494777 | 3:-47526539 | None:intergenic |
| GGGATCCGGGCGGTCCAGGG+GGG | 0.502113 | 3:+47526402 | MsG0380013890.01.T01:CDS |
| CCCACGAGTGAATAGAAAGT+TGG | 0.515787 | 3:-47526382 | None:intergenic |
| GACAGCTATCTCTCGAGCAC+AGG | 0.526610 | 3:+47526478 | MsG0380013890.01.T01:CDS |
| CCTTCATTCTGGGGTGACGG+CGG | 0.526958 | 3:+47526582 | MsG0380013890.01.T01:CDS |
| TCCAACTTTCTATTCACTCG+TGG | 0.529895 | 3:+47526381 | MsG0380013890.01.T01:CDS |
| CCGCCGTCACCCCAGAATGA+AGG | 0.541532 | 3:-47526582 | None:intergenic |
| CGAGAGGAGAGGAGCCATGA+TGG | 0.546958 | 3:-47526426 | None:intergenic |
| CCCATTTCGAGTCAAGAGAA+TGG | 0.558119 | 3:-47526612 | None:intergenic |
| ATAGAAAGTTGGATCTACAT+TGG | 0.570959 | 3:-47526371 | None:intergenic |
| CCTCCTTCATTCTGGGGTGA+CGG | 0.571639 | 3:+47526579 | MsG0380013890.01.T01:CDS |
| AAACCAAACTTCTCCTCAGG+AGG | 0.577461 | 3:+47526323 | None:intergenic |
| CCAACTTTCTATTCACTCGT+GGG | 0.591847 | 3:+47526382 | MsG0380013890.01.T01:CDS |
| CCGTCACCCCAGAATGAAGG+AGG | 0.634091 | 3:-47526579 | None:intergenic |
| ATATGAATTCTCGAGAGGAG+AGG | 0.651842 | 3:-47526437 | None:intergenic |
| GGGATATATGAATTCTCGAG+AGG | 0.654907 | 3:-47526442 | None:intergenic |
| TCGCCCCATCTATCCTCCTG+AGG | 0.661903 | 3:-47526336 | None:intergenic |
| AGATCACCTCCTTCATTCTG+GGG | 0.666598 | 3:+47526573 | MsG0380013890.01.T01:CDS |
| TCTCCTCAGGAGGATAGATG+GGG | 0.682857 | 3:+47526333 | MsG0380013890.01.T01:CDS |
| ATTCACTCGTGGGATCCGGG+CGG | 0.763324 | 3:+47526392 | MsG0380013890.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATATATCCCTTATCAGTATA+TGG | + | Chr3:47526456-47526475 | MsG0380013890.01.T01:CDS | 25.0% |
| ! | CCTCAATAGAAAAAGAAAAA+CGG | + | Chr3:47526512-47526531 | MsG0380013890.01.T01:CDS | 25.0% |
| ATAGAAAGTTGGATCTACAT+TGG | - | Chr3:47526374-47526393 | None:intergenic | 30.0% | |
| !! | CCGTTTTTCTTTTTCTATTG+AGG | - | Chr3:47526515-47526534 | None:intergenic | 30.0% |
| AGCTGTCCATATACTGATAA+GGG | - | Chr3:47526465-47526484 | None:intergenic | 35.0% | |
| TAGCTGTCCATATACTGATA+AGG | - | Chr3:47526466-47526485 | None:intergenic | 35.0% | |
| ATATGAATTCTCGAGAGGAG+AGG | - | Chr3:47526440-47526459 | None:intergenic | 40.0% | |
| CCAACTTTCTATTCACTCGT+GGG | + | Chr3:47526382-47526401 | MsG0380013890.01.T01:CDS | 40.0% | |
| GGGATATATGAATTCTCGAG+AGG | - | Chr3:47526445-47526464 | None:intergenic | 40.0% | |
| GTCTGTGAAGATACGTTGTT+AGG | - | Chr3:47526542-47526561 | None:intergenic | 40.0% | |
| TCCAACTTTCTATTCACTCG+TGG | + | Chr3:47526381-47526400 | MsG0380013890.01.T01:CDS | 40.0% | |
| AGATCACCTCCTTCATTCTG+GGG | + | Chr3:47526573-47526592 | MsG0380013890.01.T01:CDS | 45.0% | |
| CCCACGAGTGAATAGAAAGT+TGG | - | Chr3:47526385-47526404 | None:intergenic | 45.0% | |
| GAGATCACCTCCTTCATTCT+GGG | + | Chr3:47526572-47526591 | MsG0380013890.01.T01:CDS | 45.0% | |
| TATCTCTCGAGCACAGGTTT+AGG | + | Chr3:47526484-47526503 | MsG0380013890.01.T01:CDS | 45.0% | |
| TTCTATTCACTCGTGGGATC+CGG | + | Chr3:47526388-47526407 | MsG0380013890.01.T01:CDS | 45.0% | |
| TTCTCCTCAGGAGGATAGAT+GGG | + | Chr3:47526332-47526351 | MsG0380013890.01.T01:CDS | 45.0% | |
| CGAGATCACCTCCTTCATTC+TGG | + | Chr3:47526571-47526590 | MsG0380013890.01.T01:CDS | 50.0% | |
| CTTCTCCTCAGGAGGATAGA+TGG | + | Chr3:47526331-47526350 | MsG0380013890.01.T01:CDS | 50.0% | |
| GGAGGTGATCTCGTAGTTCT+TGG | - | Chr3:47526564-47526583 | None:intergenic | 50.0% | |
| TCTATTCACTCGTGGGATCC+GGG | + | Chr3:47526389-47526408 | MsG0380013890.01.T01:CDS | 50.0% | |
| TCTCCTCAGGAGGATAGATG+GGG | + | Chr3:47526333-47526352 | MsG0380013890.01.T01:CDS | 50.0% | |
| ! | CTCGAGCACAGGTTTAGGTT+TGG | + | Chr3:47526489-47526508 | MsG0380013890.01.T01:CDS | 50.0% |
| GACAGCTATCTCTCGAGCAC+AGG | + | Chr3:47526478-47526497 | MsG0380013890.01.T01:CDS | 55.0% | |
| GAGGATAGATGGGGCGATTC+AGG | + | Chr3:47526342-47526361 | MsG0380013890.01.T01:CDS | 55.0% | |
| !! | CCTCCTTCATTCTGGGGTGA+CGG | + | Chr3:47526579-47526598 | MsG0380013890.01.T01:CDS | 55.0% |
| ATTCACTCGTGGGATCCGGG+CGG | + | Chr3:47526392-47526411 | MsG0380013890.01.T01:CDS | 60.0% | |
| CCGTCACCCCAGAATGAAGG+AGG | - | Chr3:47526582-47526601 | None:intergenic | 60.0% | |
| CGAGAGGAGAGGAGCCATGA+TGG | - | Chr3:47526429-47526448 | None:intergenic | 60.0% | |
| TCGCCCCATCTATCCTCCTG+AGG | - | Chr3:47526339-47526358 | None:intergenic | 60.0% | |
| !! | CCTTCATTCTGGGGTGACGG+CGG | + | Chr3:47526582-47526601 | MsG0380013890.01.T01:CDS | 60.0% |
| !! | CTTCATTCTGGGGTGACGGC+GGG | + | Chr3:47526583-47526602 | MsG0380013890.01.T01:CDS | 60.0% |
| CCGCCGTCACCCCAGAATGA+AGG | - | Chr3:47526585-47526604 | None:intergenic | 65.0% | |
| CGGTCCAGGGGGGACCATCA+TGG | + | Chr3:47526412-47526431 | MsG0380013890.01.T01:CDS | 70.0% | |
| GGAGCCATGATGGTCCCCCC+TGG | - | Chr3:47526419-47526438 | None:intergenic | 70.0% | |
| ATGGTCCCCCCTGGACCGCC+CGG | - | Chr3:47526410-47526429 | None:intergenic | 75.0% | |
| CGTGGGATCCGGGCGGTCCA+GGG | + | Chr3:47526399-47526418 | MsG0380013890.01.T01:CDS | 75.0% | |
| GTGGGATCCGGGCGGTCCAG+GGG | + | Chr3:47526400-47526419 | MsG0380013890.01.T01:CDS | 75.0% | |
| TCGTGGGATCCGGGCGGTCC+AGG | + | Chr3:47526398-47526417 | MsG0380013890.01.T01:CDS | 75.0% | |
| TGGGATCCGGGCGGTCCAGG+GGG | + | Chr3:47526401-47526420 | MsG0380013890.01.T01:CDS | 75.0% | |
| ! | GGGATCCGGGCGGTCCAGGG+GGG | + | Chr3:47526402-47526421 | MsG0380013890.01.T01:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 47526327 | 47526623 | 47526327 | ID=MsG0380013890.01;Name=MsG0380013890.01 |
| Chr3 | mRNA | 47526327 | 47526623 | 47526327 | ID=MsG0380013890.01.T01;Parent=MsG0380013890.01;Name=MsG0380013890.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|0|1|0|98 |
| Chr3 | exon | 47526327 | 47526623 | 47526327 | ID=MsG0380013890.01.T01:exon:26400;Parent=MsG0380013890.01.T01 |
| Chr3 | CDS | 47526327 | 47526623 | 47526327 | ID=MsG0380013890.01.T01:cds;Parent=MsG0380013890.01.T01 |
| Chr3 | mRNA | 47526431 | 47526505 | 47526431 | ID=MsG0380013890.01.T02;Parent=MsG0380013890.01;Name=MsG0380013890.01.T02;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|24 |
| Chr3 | exon | 47526431 | 47526505 | 47526431 | ID=MsG0380013890.01.T02:exon:26401;Parent=MsG0380013890.01.T02 |
| Chr3 | CDS | 47526431 | 47526505 | 47526431 | ID=MsG0380013890.01.T02:cds;Parent=MsG0380013890.01.T02 |
| Gene Sequence |
| Protein sequence |
