AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007042.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007042.01.T01 MTR_0002s0550 83.411 428 42 1 195 593 30 457 0.0 694
MsG0280007042.01.T01 MTR_0212s0040 62.201 418 120 2 195 574 31 448 3.33e-166 495
MsG0280007042.01.T01 MTR_2g008350 90.909 231 21 0 357 587 2 232 8.65e-149 431
MsG0280007042.01.T01 MTR_2g020310 77.049 183 13 1 244 397 48 230 2.43e-85 266
MsG0280007042.01.T01 MTR_4g051103 83.217 143 2 2 1 123 1 141 7.99e-73 234
MsG0280007042.01.T01 MTR_0002s0530 71.329 143 21 1 1 123 253 395 5.68e-60 207
MsG0280007042.01.T01 MTR_4g079170 96.774 93 3 0 196 288 31 123 6.91e-52 175
MsG0280007042.01.T01 MTR_3g108400 85.897 78 11 0 417 494 14 91 9.72e-40 140
MsG0280007042.01.T01 MTR_3g029550 66.957 115 13 2 29 123 1 110 2.14e-38 141
MsG0280007042.01.T01 MTR_7g116680 58.462 130 6 3 14 123 90 191 9.19e-37 138
MsG0280007042.01.T01 MTR_1g109420 91.935 62 5 0 196 257 161 222 1.67e-29 116
MsG0280007042.01.T01 MTR_4g051097 98.148 54 1 0 145 198 1 54 7.10e-27 104
MsG0280007042.01.T01 MTR_4g044667 72.289 83 20 1 185 267 311 390 2.73e-26 111
MsG0280007042.01.T01 MTR_3g108390 72.581 62 12 1 355 416 1 57 8.89e-24 95.5
MsG0280007042.01.T01 MTR_1g112870 28.053 303 169 6 252 507 84 384 6.77e-23 102
MsG0280007042.01.T01 MTR_7g081010 26.994 326 176 7 235 507 66 382 1.34e-22 101
MsG0280007042.01.T01 MTR_0002s0540 95.745 47 2 0 145 191 1 47 1.54e-21 92.8
MsG0280007042.01.T01 MTR_3g029530 87.500 40 3 1 1 40 1 38 5.10e-14 75.9
MsG0280007042.01.T01 MTR_4g005410 29.148 223 133 7 304 508 251 466 1.75e-12 70.9
MsG0280007042.01.T01 MTR_5g080990 90.323 31 3 0 35 65 36 66 5.29e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007042.01.T01 ATCG00120 87.617 428 24 1 195 593 30 457 0.0 742
MsG0280007042.01.T01 ATMG01190 58.124 437 145 2 195 593 31 467 4.40e-170 493
MsG0280007042.01.T01 AT2G07698 58.661 433 141 2 195 589 301 733 4.33e-166 493
MsG0280007042.01.T01 ATCG00150 72.414 145 18 2 1 123 1 145 2.31e-61 204
MsG0280007042.01.T01 ATCG00140 92.593 54 4 0 145 198 1 54 4.65e-25 99.4
MsG0280007042.01.T01 AT4G38510 28.146 302 169 6 252 507 90 389 1.44e-23 104
MsG0280007042.01.T01 AT4G38510 28.146 302 169 6 252 507 83 382 1.46e-23 104
MsG0280007042.01.T01 AT4G38510 28.146 302 169 6 252 507 83 382 1.46e-23 104
MsG0280007042.01.T01 AT4G38510 28.146 302 169 6 252 507 83 382 1.46e-23 104
MsG0280007042.01.T01 AT4G38510 28.146 302 169 6 252 507 83 382 1.46e-23 104
MsG0280007042.01.T01 AT1G76030 28.146 302 169 6 252 507 82 381 8.48e-23 102
MsG0280007042.01.T01 AT1G20260 26.911 327 176 7 235 507 65 382 1.62e-22 101
MsG0280007042.01.T01 AT1G78900 29.148 223 133 7 304 508 250 465 1.98e-12 70.5
MsG0280007042.01.T01 AT1G78900 29.148 223 133 7 304 508 250 465 1.98e-12 70.5

Find 141 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACGACATTGCTCGTATTTA+TGG 0.140550 2:+9795236 MsG0280007042.01.T01:CDS
ACCAGTAAGTGAGGGTTATT+TGG 0.166311 2:+9795421 MsG0280007042.01.T01:CDS
CAACATTTCTATTGGCAAAT+AGG 0.196864 2:+9791270 MsG0280007042.01.T01:CDS
TGTAGGCATTGCTTTGAATT+TGG 0.201612 2:+9795307 MsG0280007042.01.T01:CDS
AACATTTCTATTGGCAAATA+GGG 0.237546 2:+9791271 MsG0280007042.01.T01:CDS
CCCAAATAACCCTCACTTAC+TGG 0.241036 2:-9795422 None:intergenic
TTATTTACATTCTCGTCTTT+TGG 0.245014 2:+9796002 MsG0280007042.01.T01:CDS
AAATGTTGGTGTTGTATTAA+TGG 0.258988 2:+9795337 MsG0280007042.01.T01:CDS
GGCCAGCGAGAATTAATTAT+TGG 0.267680 2:+9795613 MsG0280007042.01.T01:intron
CGGAAGCAGAGGACAAAATA+AGG 0.270738 2:+9793142 MsG0280007042.01.T01:CDS
GGTAGCTGGTAAATTAAAAT+TGG 0.278592 2:+9796260 MsG0280007042.01.T01:CDS
TAAATTTCTCGTTGAGTTAA+GGG 0.286893 2:+9796490 MsG0280007042.01.T01:CDS
ATTGAATCCTATTGAATCTA+AGG 0.304062 2:+9792588 MsG0280007042.01.T01:CDS
GCCGTCGGGCTTGCTTCTAT+TGG 0.311843 2:+9793060 MsG0280007042.01.T01:CDS
GCTGCTTCTGTTATCGCTGC+TGG 0.315135 2:+9793033 MsG0280007042.01.T01:CDS
GCCAGAGCTGCACCTGTATA+AGG 0.317929 2:-9795844 None:intergenic
TTTACCAGCTACCTGTTTCA+TGG 0.322039 2:-9796250 None:intergenic
GTAAATTTCTCGTTGAGTTA+AGG 0.332779 2:+9796489 MsG0280007042.01.T01:CDS
CTCAAGTACTTATTACCTCT+TGG 0.341108 2:+9791310 MsG0280007042.01.T01:CDS
GCTGCAGGGCAAGCTGTAGA+AGG 0.363265 2:+9793105 MsG0280007042.01.T01:CDS
TAGATTCAATAGGATTCAAT+AGG 0.364608 2:-9792585 None:intergenic
GCGATAAGCCTGTGCTTGTT+TGG 0.364708 2:-9795920 None:intergenic
GCCAGCGAGAATTAATTATT+GGG 0.365780 2:+9795614 MsG0280007042.01.T01:intron
CCTGATTGGGTCTCAACTAT+TGG 0.368964 2:-9796078 None:intergenic
TAGGATTCGAGAATCATTCT+TGG 0.369091 2:-9792566 None:intergenic
TGGTAAATTAAAATTGGAAT+TGG 0.382867 2:+9796266 MsG0280007042.01.T01:CDS
CACAGTGAGAGGAGCTGATT+GGG 0.383779 2:-9796397 None:intergenic
ATTTCTCCTCGACCATCAAT+AGG 0.391542 2:-9795470 None:intergenic
AATGTTGGTGTTGTATTAAT+GGG 0.391664 2:+9795338 MsG0280007042.01.T01:CDS
TCCTTATACAGGTGCAGCTC+TGG 0.392160 2:+9795843 MsG0280007042.01.T01:CDS
GCCCTAGCTAAACCTATTGA+TGG 0.393369 2:+9795458 MsG0280007042.01.T01:CDS
CCAATAGTTGAGACCCAATC+AGG 0.395916 2:+9796078 MsG0280007042.01.T01:CDS
CGGATTTCTAACAACTAGAA+TGG 0.400438 2:-9791361 None:intergenic
AGATACAATTCTCAATCAAC+AGG 0.401486 2:+9795669 MsG0280007042.01.T01:CDS
TCAAATTAAAGCCATGAAAC+AGG 0.408465 2:+9796239 MsG0280007042.01.T01:CDS
CCGGGATACGCTTCGCGACC+TGG 0.409309 2:-9795970 None:intergenic
AAGCTGAAACATCTCCTGAT+TGG 0.409535 2:-9796092 None:intergenic
GCTAAATTAAGTTCTCAGTT+AGG 0.415873 2:+9796033 MsG0280007042.01.T01:CDS
GCTTCTATTGGACCTGGAGT+TGG 0.416315 2:+9793072 MsG0280007042.01.T01:CDS
AGTTATACCTTAGATTCAAT+AGG 0.420668 2:-9792595 None:intergenic
CAGATAATAACTATTTATAC+TGG 0.421148 2:+9796426 MsG0280007042.01.T01:CDS
CCAGTAAGTGAGGGTTATTT+GGG 0.424091 2:+9795422 MsG0280007042.01.T01:CDS
AGTAGTATTTATATCATTTG+TGG 0.424401 2:-9791587 None:intergenic
ATTATTGGGGACAGACAAAC+AGG 0.427629 2:+9795628 MsG0280007042.01.T01:CDS
TCGCTGCTGGGTTGGCCGTC+GGG 0.427770 2:+9793046 MsG0280007042.01.T01:CDS
TCAAGTACTTATTACCTCTT+GGG 0.428139 2:+9791311 MsG0280007042.01.T01:CDS
ATCGCTGCTGGGTTGGCCGT+CGG 0.428270 2:+9793045 MsG0280007042.01.T01:CDS
AAATATTTGGCCATCTGTAA+TGG 0.434228 2:-9796136 None:intergenic
GTAGTATTTATATCATTTGT+GGG 0.434707 2:-9791586 None:intergenic
TTGATTCATTAGAAATGATC+AGG 0.437977 2:+9796463 MsG0280007042.01.T01:CDS
CCACAGTGAGAGGAGCTGAT+TGG 0.438205 2:-9796398 None:intergenic
ACTCAGATTGGAGAAGAATA+TGG 0.441550 2:+9791453 MsG0280007042.01.T01:CDS
GGTATTTCCGTTTCCAGAGT+TGG 0.443512 2:+9796207 MsG0280007042.01.T01:CDS
GTAATGGAAATTACATTAGT+AGG 0.444650 2:-9796120 None:intergenic
ATATGTGTTTATGTAGCTAT+TGG 0.445393 2:+9795703 MsG0280007042.01.T01:CDS
TAAAGCTACGCAAAATCAAT+TGG 0.449089 2:+9796338 MsG0280007042.01.T01:CDS
TTCGTAATAGAAGAGACATT+TGG 0.452176 2:-9795942 None:intergenic
AGCTGAAACATCTCCTGATT+GGG 0.452206 2:-9796091 None:intergenic
CCGGACGTTGGAATAGTTTG+CGG 0.455395 2:-9791381 None:intergenic
GGAAGTTCGGTAAAAGCAAC+AGG 0.457398 2:+9795383 MsG0280007042.01.T01:CDS
AAGTAGGTCAACATTTCTAT+TGG 0.460455 2:+9791262 MsG0280007042.01.T01:CDS
CTGCTTCTGTTATCGCTGCT+GGG 0.461552 2:+9793034 MsG0280007042.01.T01:CDS
ATAAGCCTGTGCTTGTTTGG+AGG 0.462375 2:-9795917 None:intergenic
CAATACCTCGCTCCTTATAC+AGG 0.462710 2:+9795832 MsG0280007042.01.T01:CDS
TGAATAGGAGAAACTTATCA+TGG 0.471874 2:+9792996 MsG0280007042.01.T01:intron
GGAAGCAGAGGACAAAATAA+GGG 0.473459 2:+9793143 MsG0280007042.01.T01:CDS
AGAAGGGATTGCGCGACAAC+CGG 0.475077 2:+9793122 MsG0280007042.01.T01:CDS
TCGAGGAGAAATTTCAGCTT+CGG 0.476522 2:+9795481 MsG0280007042.01.T01:CDS
TCACGTCTCGGATGAATTCA+AGG 0.477047 2:-9791425 None:intergenic
CCAGGTCGCGAAGCGTATCC+CGG 0.478786 2:+9795970 MsG0280007042.01.T01:CDS
GGGCTTGCTTCTATTGGACC+TGG 0.481695 2:+9793066 MsG0280007042.01.T01:CDS
TAACTGAGAACTTAATTTAG+CGG 0.485288 2:-9796031 None:intergenic
CGCCGATCCAACTCTGGAAA+CGG 0.485937 2:-9796214 None:intergenic
AAATTTCAGCTTCGGAATCT+CGG 0.492871 2:+9795489 MsG0280007042.01.T01:CDS
GATATATCTGCTGTCGAAGT+AGG 0.493921 2:+9791246 MsG0280007042.01.T01:CDS
GTTGGTCAAGGTACAGCTGC+AGG 0.497139 2:+9793090 MsG0280007042.01.T01:CDS
GCGAGGTATTGTAATGTAGC+TGG 0.497569 2:-9795820 None:intergenic
TTCCGTTTCCAGAGTTGGAT+CGG 0.499691 2:+9796212 MsG0280007042.01.T01:CDS
GGTGTTGTATTAATGGGTGA+TGG 0.501676 2:+9795344 MsG0280007042.01.T01:CDS
TCTGCCGATCTATTCAATGC+TGG 0.509351 2:+9796162 MsG0280007042.01.T01:CDS
GACGTGAGCAAAACTCAGAT+TGG 0.510359 2:+9791441 MsG0280007042.01.T01:CDS
GCTGATACAAGAGGGAAGTT+CGG 0.510716 2:+9795370 MsG0280007042.01.T01:CDS
TTCTGTTATCGCTGCTGGGT+TGG 0.514112 2:+9793038 MsG0280007042.01.T01:CDS
GTAACTACTTTACAAGAAAG+AGG 0.516144 2:+9795754 MsG0280007042.01.T01:CDS
TGATTAAAGTGTGACGTTCA+CGG 0.516487 2:-9795882 None:intergenic
TTGAGCCGCCGATCCAACTC+TGG 0.524235 2:-9796220 None:intergenic
TAAGCCTGTGCTTGTTTGGA+GGG 0.526272 2:-9795916 None:intergenic
AAAATTATAAAGTTACCTCA+TGG 0.526541 2:+9791550 MsG0280007042.01.T01:CDS
TCTGGAAATAATACCGGAGC+GGG 0.527984 2:-9795524 None:intergenic
GAAATACCCACATTAATAGC+TGG 0.538501 2:-9796192 None:intergenic
TTATGGTCTTGATGAAGTAA+TGG 0.538951 2:+9795253 MsG0280007042.01.T01:CDS
TTTACAAGAAAGAGGGGCAA+TGG 0.541624 2:+9795762 MsG0280007042.01.T01:CDS
CCGCAAACTATTCCAACGTC+CGG 0.541897 2:+9791381 MsG0280007042.01.T01:CDS
GACCATCAATAGGTTTAGCT+AGG 0.542268 2:-9795460 None:intergenic
ATTGGACCTGGAGTTGGTCA+AGG 0.543278 2:+9793078 MsG0280007042.01.T01:CDS
AATGGAGTACACTATTATAG+TGG 0.544433 2:+9795780 MsG0280007042.01.T01:CDS
AGCATCTTCTGTGGCTCAAG+TGG 0.546125 2:+9795732 MsG0280007042.01.T01:CDS
ACTATTTATACTGGAACGAA+TGG 0.546292 2:+9796435 MsG0280007042.01.T01:CDS
AAGAAATTCTGACCGGACGT+TGG 0.546490 2:-9791393 None:intergenic
ATCTGTTCTTCCACAGTGAG+AGG 0.551959 2:-9796408 None:intergenic
TGCGCGACAACCGGAAGCAG+AGG 0.554171 2:+9793131 MsG0280007042.01.T01:CDS
AATGTAATTTCCATTACAGA+TGG 0.557336 2:+9796126 MsG0280007042.01.T01:CDS
AAAGCCATGAAACAGGTAGC+TGG 0.558354 2:+9796246 MsG0280007042.01.T01:CDS
ACATTTCTATTGGCAAATAG+GGG 0.561596 2:+9791272 MsG0280007042.01.T01:CDS
TTAAGTTCTCAGTTAGGTGA+AGG 0.563580 2:+9796039 MsG0280007042.01.T01:CDS
CGATCCCTCCAAACAAGCAC+AGG 0.574680 2:+9795912 MsG0280007042.01.T01:CDS
GTTAATCGAATCTCCCGCTC+CGG 0.576049 2:+9795511 MsG0280007042.01.T01:CDS
TGCTCAGATACCAGTAAGTG+AGG 0.577261 2:+9795412 MsG0280007042.01.T01:CDS
TAACTACTTTACAAGAAAGA+GGG 0.578222 2:+9795755 MsG0280007042.01.T01:CDS
TGAATTAGTCGAATTTGAAG+AGG 0.580561 2:+9795280 MsG0280007042.01.T01:CDS
CTGCAGGGCAAGCTGTAGAA+GGG 0.582070 2:+9793106 MsG0280007042.01.T01:CDS
ACAGGTACTGTACTTCAAGT+AGG 0.592569 2:+9795212 MsG0280007042.01.T01:intron
GCTGTACCTTGACCAACTCC+AGG 0.593501 2:-9793084 None:intergenic
GAATTTGAAGAGGGTACTGT+AGG 0.593991 2:+9795290 MsG0280007042.01.T01:CDS
CTTCTATTACGAAGACCACC+AGG 0.597315 2:+9795952 MsG0280007042.01.T01:CDS
ACCATCAATAGGTTTAGCTA+GGG 0.601516 2:-9795459 None:intergenic
ATCAGACCAGCTATTAATGT+GGG 0.604091 2:+9796186 MsG0280007042.01.T01:CDS
GAATTAGTCGAATTTGAAGA+GGG 0.619600 2:+9795281 MsG0280007042.01.T01:CDS
GCTAAACCTATTGATGGTCG+AGG 0.620970 2:+9795464 MsG0280007042.01.T01:CDS
AATCAGACCAGCTATTAATG+TGG 0.625394 2:+9796185 MsG0280007042.01.T01:CDS
GATTCCAGCATTGAATAGAT+CGG 0.626418 2:-9796166 None:intergenic
ATATTCAAAGAAATTCTGAC+CGG 0.632509 2:-9791400 None:intergenic
AACTACTTTACAAGAAAGAG+GGG 0.635218 2:+9795756 MsG0280007042.01.T01:CDS
CCAGCGAGAATTAATTATTG+GGG 0.636830 2:+9795615 MsG0280007042.01.T01:intron
TCCAATAGAAGCAAGCCCGA+CGG 0.638086 2:-9793061 None:intergenic
GGTCTTGATGAAGTAATGGC+AGG 0.640111 2:+9795257 MsG0280007042.01.T01:CDS
ACAGAAGCAGCAGAAATCAG+TGG 0.640161 2:-9793021 None:intergenic
TTGGTCAAGGTACAGCTGCA+GGG 0.643472 2:+9793091 MsG0280007042.01.T01:CDS
ACGCAAAATCAATTGGCAAG+AGG 0.645378 2:+9796345 MsG0280007042.01.T01:CDS
GAAGCAGAGGACAAAATAAG+GGG 0.658398 2:+9793144 MsG0280007042.01.T01:CDS
GATAGCAATTACAACCCAAG+AGG 0.659110 2:-9791325 None:intergenic
CGTTTCCAGAGTTGGATCGG+CGG 0.663289 2:+9796215 MsG0280007042.01.T01:CDS
GATGGTTTGCTGATACAAGA+GGG 0.671964 2:+9795362 MsG0280007042.01.T01:CDS
GCTCAGATACCAGTAAGTGA+GGG 0.673181 2:+9795413 MsG0280007042.01.T01:CDS
TGATGGTTTGCTGATACAAG+AGG 0.676056 2:+9795361 MsG0280007042.01.T01:CDS
CTGCACCTGTATAAGGAGCG+AGG 0.679934 2:-9795837 None:intergenic
CCAATCAGCTCCTCTCACTG+TGG 0.687803 2:+9796398 MsG0280007042.01.T01:CDS
GGATACGCTTCGCGACCTGG+TGG 0.699302 2:-9795967 None:intergenic
GTCTGGAAATAATACCGGAG+CGG 0.700377 2:-9795525 None:intergenic
GGTGCAGCTAATTCTCCATG+AGG 0.714976 2:-9791565 None:intergenic
GATACAATTCTCAATCAACA+GGG 0.744742 2:+9795670 MsG0280007042.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAGAAATAATATTAGATT+GGG + Chr2:9792223-9792242 MsG0280007042.01.T01:intron 10.0%
!! TATTAGAAATAATATTAGAT+TGG + Chr2:9792222-9792241 MsG0280007042.01.T01:intron 10.0%
!! TCAATTCTAAATTAAATAAA+GGG - Chr2:9793467-9793486 None:intergenic 10.0%
!! TTCAATTCTAAATTAAATAA+AGG - Chr2:9793468-9793487 None:intergenic 10.0%
!!! TTTTCTTTATTTATTTGAAT+AGG + Chr2:9792981-9793000 MsG0280007042.01.T01:intron 10.0%
!!! TTTTTTAAAGATTAAACAAA+AGG - Chr2:9793251-9793270 None:intergenic 10.0%
!! AATCAAAAAATCAAAAAAAC+TGG + Chr2:9793729-9793748 MsG0280007042.01.T01:intron 15.0%
!! AATTCTAAATTAAATAAAGG+GGG - Chr2:9793465-9793484 None:intergenic 15.0%
!! ATAAATTAATCAGAATTCTT+TGG + Chr2:9794355-9794374 MsG0280007042.01.T01:intron 15.0%
!! ATAATTAAGTCATAATTTCT+TGG + Chr2:9792935-9792954 MsG0280007042.01.T01:intron 15.0%
!! ATATTTCCATAGTAATAATT+TGG + Chr2:9792399-9792418 MsG0280007042.01.T01:intron 15.0%
!! ATCAAAAAATCAAAAAAACT+GGG + Chr2:9793730-9793749 MsG0280007042.01.T01:intron 15.0%
!! CAATTCTAAATTAAATAAAG+GGG - Chr2:9793466-9793485 None:intergenic 15.0%
!! GATAATAATGAATAAAAGAA+AGG + Chr2:9792459-9792478 MsG0280007042.01.T01:intron 15.0%
!! TAATTCAATTTATACAACTT+TGG + Chr2:9794822-9794841 MsG0280007042.01.T01:intron 15.0%
!! TTCAAATTAAGAAATATTCA+TGG + Chr2:9795109-9795128 MsG0280007042.01.T01:intron 15.0%
!!! ATTCGAATTTAATTTGATTT+AGG - Chr2:9792381-9792400 None:intergenic 15.0%
!!! GTATTAATTTTTTTTGGAAA+GGG + Chr2:9793917-9793936 MsG0280007042.01.T01:intron 15.0%
!!! TGTATTAATTTTTTTTGGAA+AGG + Chr2:9793916-9793935 MsG0280007042.01.T01:intron 15.0%
!! AAAAGAAAGGACAAAAAATA+GGG + Chr2:9792472-9792491 MsG0280007042.01.T01:intron 20.0%
!! AAAATTATAAAGTTACCTCA+TGG + Chr2:9791550-9791569 MsG0280007042.01.T01:CDS 20.0%
!! AAATGAATATCGAAGTTATT+TGG + Chr2:9792849-9792868 MsG0280007042.01.T01:intron 20.0%
!! AATAATTGTAGGAGTTAAAT+CGG - Chr2:9793381-9793400 None:intergenic 20.0%
!! AGTAGTATTTATATCATTTG+TGG - Chr2:9791590-9791609 None:intergenic 20.0%
!! ATACAAGATTAAAATATTGG+AGG - Chr2:9794433-9794452 None:intergenic 20.0%
!! ATGTAAATAAAAAACATCTC+CGG - Chr2:9795992-9796011 None:intergenic 20.0%
!! ATTCTGATTAATTTATACGT+AGG - Chr2:9794351-9794370 None:intergenic 20.0%
!! CAGATAATAACTATTTATAC+TGG + Chr2:9796426-9796445 MsG0280007042.01.T01:CDS 20.0%
!! CCAATACAAGATTAAAATAT+TGG - Chr2:9794436-9794455 None:intergenic 20.0%
!! GTAGTATTTATATCATTTGT+GGG - Chr2:9791589-9791608 None:intergenic 20.0%
!! GTTTATTTCAAAGAATAGAT+TGG + Chr2:9793954-9793973 MsG0280007042.01.T01:intron 20.0%
!! TAAAAGAAAGGACAAAAAAT+AGG + Chr2:9792471-9792490 MsG0280007042.01.T01:intron 20.0%
!! TAAAGATTAAACAAAAGGAT+TGG - Chr2:9793246-9793265 None:intergenic 20.0%
!! TAGATTCTATATTCTCTAAT+TGG - Chr2:9793568-9793587 None:intergenic 20.0%
!! TAGGAAAATCAAATAAACTT+TGG - Chr2:9792362-9792381 None:intergenic 20.0%
!! TGGTAAATTAAAATTGGAAT+TGG + Chr2:9796266-9796285 MsG0280007042.01.T01:CDS 20.0%
!! TTAAATGTGAATGAATGAAA+CGG - Chr2:9792332-9792351 None:intergenic 20.0%
!!! AAATAATATTGTTTTTTCCG+TGG + Chr2:9793283-9793302 MsG0280007042.01.T01:intron 20.0%
!!! AAATCTTCTAAGATGTTAAT+CGG - Chr2:9791717-9791736 None:intergenic 20.0%
!!! ATGGAAGCTTTAATATTTAT+GGG + Chr2:9793192-9793211 MsG0280007042.01.T01:intron 20.0%
!!! CCAATATTTTAATCTTGTAT+TGG + Chr2:9794433-9794452 MsG0280007042.01.T01:intron 20.0%
!!! CTAGGTGTATTAATTTTTTT+TGG + Chr2:9793911-9793930 MsG0280007042.01.T01:intron 20.0%
!!! CTATTATTTTTGTTTCGAAT+TGG + Chr2:9791506-9791525 MsG0280007042.01.T01:intron 20.0%
!!! GGTATTGAATAATTCAAAAA+TGG + Chr2:9792718-9792737 MsG0280007042.01.T01:intron 20.0%
!!! TAGATTTGTTGCTAAAATAT+CGG - Chr2:9793873-9793892 None:intergenic 20.0%
!!! TATGGAAGCTTTAATATTTA+TGG + Chr2:9793191-9793210 MsG0280007042.01.T01:intron 20.0%
!!! TTTTGATAACTAATCAATGA+TGG - Chr2:9791933-9791952 None:intergenic 20.0%
! AACATTTCTATTGGCAAATA+GGG + Chr2:9791271-9791290 MsG0280007042.01.T01:CDS 25.0%
! AATGAAGCAAAGAAAAGAAT+CGG - Chr2:9793816-9793835 None:intergenic 25.0%
! AATGTAATTTCCATTACAGA+TGG + Chr2:9796126-9796145 MsG0280007042.01.T01:CDS 25.0%
! AGAACGAAGAATTAAAAGAA+TGG + Chr2:9792757-9792776 MsG0280007042.01.T01:intron 25.0%
! AGTTATACCTTAGATTCAAT+AGG - Chr2:9792598-9792617 None:intergenic 25.0%
! ATATGTGTTTATGTAGCTAT+TGG + Chr2:9795703-9795722 MsG0280007042.01.T01:CDS 25.0%
! ATATTCAAAGAAATTCTGAC+CGG - Chr2:9791403-9791422 None:intergenic 25.0%
! ATTGAATCCTATTGAATCTA+AGG + Chr2:9792588-9792607 MsG0280007042.01.T01:CDS 25.0%
! CATGAATCTTTCAATTCATT+TGG - Chr2:9794555-9794574 None:intergenic 25.0%
! CTCATTCGATAATAAAGATA+GGG + Chr2:9794499-9794518 MsG0280007042.01.T01:intron 25.0%
! GAAAGACCAAATTATTACTA+TGG - Chr2:9792408-9792427 None:intergenic 25.0%
! GTGCTAATATTGATATGTTT+GGG + Chr2:9794998-9795017 MsG0280007042.01.T01:intron 25.0%
! TAACTACTTTACAAGAAAGA+GGG + Chr2:9795755-9795774 MsG0280007042.01.T01:CDS 25.0%
! TAACTGAGAACTTAATTTAG+CGG - Chr2:9796034-9796053 None:intergenic 25.0%
! TAGATTCAATAGGATTCAAT+AGG - Chr2:9792588-9792607 None:intergenic 25.0%
! TAGATTGGGAACTATAATTT+CGG + Chr2:9792237-9792256 MsG0280007042.01.T01:intron 25.0%
! TCATTGGAGTAAATACAAAT+TGG - Chr2:9791970-9791989 None:intergenic 25.0%
! TCCTACAATTATTCTTCATT+CGG + Chr2:9793388-9793407 MsG0280007042.01.T01:intron 25.0%
! TCTACTAGAATATAGAGTAT+AGG + Chr2:9795053-9795072 MsG0280007042.01.T01:intron 25.0%
! TGAATTGAAAGATTCATGTT+TGG + Chr2:9794557-9794576 MsG0280007042.01.T01:intron 25.0%
! TGCTAATATTGATATGTTTG+GGG + Chr2:9794999-9795018 MsG0280007042.01.T01:intron 25.0%
! TGTAAATAAAAAACATCTCC+GGG - Chr2:9795991-9796010 None:intergenic 25.0%
! TGTATTCACAAAAAACTACA+TGG + Chr2:9792811-9792830 MsG0280007042.01.T01:intron 25.0%
! TGTTTAGAAATAGAGAAAAG+AGG + Chr2:9794471-9794490 MsG0280007042.01.T01:intron 25.0%
! TTATTCATTATTATCCCACA+TGG - Chr2:9792454-9792473 None:intergenic 25.0%
! TTCAAAATTCAGAAGAACTA+CGG + Chr2:9794680-9794699 MsG0280007042.01.T01:intron 25.0%
! TTCTCTTTACGATGAAAAAT+AGG + Chr2:9794273-9794292 MsG0280007042.01.T01:intron 25.0%
! TTGATTCATTAGAAATGATC+AGG + Chr2:9796463-9796482 MsG0280007042.01.T01:CDS 25.0%
! TTTCTACCACTATGTTAATA+CGG + Chr2:9794199-9794218 MsG0280007042.01.T01:intron 25.0%
!! AAAATTAGTCTATCCATAAG+AGG + Chr2:9793765-9793784 MsG0280007042.01.T01:intron 25.0%
!! AATTTGGAATCCAAAAATGT+TGG + Chr2:9795323-9795342 MsG0280007042.01.T01:CDS 25.0%
!! GAATCTAAGGTATAACTAAT+TGG + Chr2:9792601-9792620 MsG0280007042.01.T01:intron 25.0%
!! GATTCATTTTGAACAACAAA+GGG + Chr2:9794873-9794892 MsG0280007042.01.T01:intron 25.0%
!! GGTAACTTTATAATTTTCCA+AGG - Chr2:9791547-9791566 None:intergenic 25.0%
!! GTAATGGAAATTACATTAGT+AGG - Chr2:9796123-9796142 None:intergenic 25.0%
!! TAATACAACACCAACATTTT+TGG - Chr2:9795336-9795355 None:intergenic 25.0%
!! TTATAATGAAAAAGTGCAGT+TGG - Chr2:9793986-9794005 None:intergenic 25.0%
!! TTATTTACATTCTCGTCTTT+TGG + Chr2:9796002-9796021 MsG0280007042.01.T01:CDS 25.0%
!!! AAAAAAGGATTGGCTTATTT+TGG + Chr2:9791660-9791679 MsG0280007042.01.T01:intron 25.0%
!!! AAATGTTGGTGTTGTATTAA+TGG + Chr2:9795337-9795356 MsG0280007042.01.T01:CDS 25.0%
!!! AAGACAACTCTTAGTTTTTT+AGG + Chr2:9792538-9792557 MsG0280007042.01.T01:intron 25.0%
!!! AATGTTGGTGTTGTATTAAT+GGG + Chr2:9795338-9795357 MsG0280007042.01.T01:CDS 25.0%
!!! AGACAACTCTTAGTTTTTTA+GGG + Chr2:9792539-9792558 MsG0280007042.01.T01:intron 25.0%
!!! CTTTGCTGACAATTATTTTT+TGG + Chr2:9794397-9794416 MsG0280007042.01.T01:intron 25.0%
!!! TGAATTTGATTCTTTTTCGA+AGG - Chr2:9795093-9795112 None:intergenic 25.0%
AAATATTTGGCCATCTGTAA+TGG - Chr2:9796139-9796158 None:intergenic 30.0%
AACAGTATAGGAACTACTAA+AGG - Chr2:9791825-9791844 None:intergenic 30.0%
AACTACTTTACAAGAAAGAG+GGG + Chr2:9795756-9795775 MsG0280007042.01.T01:CDS 30.0%
AACTAGTATCTACTTCTAAG+AGG + Chr2:9793518-9793537 MsG0280007042.01.T01:intron 30.0%
AAGTAGGTCAACATTTCTAT+TGG + Chr2:9791262-9791281 MsG0280007042.01.T01:CDS 30.0%
AAGTCGAAAACTAAGTGATA+AGG - Chr2:9791748-9791767 None:intergenic 30.0%
AATGGAGTACACTATTATAG+TGG + Chr2:9795780-9795799 MsG0280007042.01.T01:CDS 30.0%
ACATTTCTATTGGCAAATAG+GGG + Chr2:9791272-9791291 MsG0280007042.01.T01:CDS 30.0%
ACTATTTATACTGGAACGAA+TGG + Chr2:9796435-9796454 MsG0280007042.01.T01:CDS 30.0%
AGAAATAGAGAAAAGAGGAT+AGG + Chr2:9794476-9794495 MsG0280007042.01.T01:intron 30.0%
AGATACAATTCTCAATCAAC+AGG + Chr2:9795669-9795688 MsG0280007042.01.T01:CDS 30.0%
AGATAGGGAAATTTCCTATA+CGG + Chr2:9794514-9794533 MsG0280007042.01.T01:intron 30.0%
AGTCGAAAACTAAGTGATAA+GGG - Chr2:9791747-9791766 None:intergenic 30.0%
ATAAATCTAAGTGTAGTGCT+AGG + Chr2:9793893-9793912 MsG0280007042.01.T01:intron 30.0%
ATGTTAATCGGTAAAAGGAT+TGG - Chr2:9791705-9791724 None:intergenic 30.0%
CAACATTTCTATTGGCAAAT+AGG + Chr2:9791270-9791289 MsG0280007042.01.T01:CDS 30.0%
CAATTTCCGTATTAACATAG+TGG - Chr2:9794208-9794227 None:intergenic 30.0%
CACTATGTTAATACGGAAAT+TGG + Chr2:9794206-9794225 MsG0280007042.01.T01:intron 30.0%
CGATGAAAAATAGGAAAAAC+AGG + Chr2:9794282-9794301 MsG0280007042.01.T01:intron 30.0%
CTAAGATGTTAATCGGTAAA+AGG - Chr2:9791710-9791729 None:intergenic 30.0%
GAATTAGTCGAATTTGAAGA+GGG + Chr2:9795281-9795300 MsG0280007042.01.T01:CDS 30.0%
GATACAATTCTCAATCAACA+GGG + Chr2:9795670-9795689 MsG0280007042.01.T01:CDS 30.0%
GATCGGCAGATAAAAATATT+TGG - Chr2:9796152-9796171 None:intergenic 30.0%
GCTAAATTAAGTTCTCAGTT+AGG + Chr2:9796033-9796052 MsG0280007042.01.T01:CDS 30.0%
GCTCATTCGATAATAAAGAT+AGG + Chr2:9794498-9794517 MsG0280007042.01.T01:intron 30.0%
GGGTATTTCAAAAAAAGGAT+TGG + Chr2:9791650-9791669 MsG0280007042.01.T01:intron 30.0%
GGTAGCTGGTAAATTAAAAT+TGG + Chr2:9796260-9796279 MsG0280007042.01.T01:CDS 30.0%
GGTGCTAATATTGATATGTT+TGG + Chr2:9794997-9795016 MsG0280007042.01.T01:intron 30.0%
GTAACTACTTTACAAGAAAG+AGG + Chr2:9795754-9795773 MsG0280007042.01.T01:CDS 30.0%
TAAAGCTACGCAAAATCAAT+TGG + Chr2:9796338-9796357 MsG0280007042.01.T01:CDS 30.0%
TAGATTAATTCGATCCATGT+GGG + Chr2:9792437-9792456 MsG0280007042.01.T01:intron 30.0%
TATATAGGTGAATCTATGGA+AGG + Chr2:9791907-9791926 MsG0280007042.01.T01:intron 30.0%
TATATTGCTCAATACGTTCA+CGG - Chr2:9795169-9795188 None:intergenic 30.0%
TATGCGGGTATTTCAAAAAA+AGG + Chr2:9791645-9791664 MsG0280007042.01.T01:intron 30.0%
TCAAAATTCAGAAGAACTAC+GGG + Chr2:9794681-9794700 MsG0280007042.01.T01:intron 30.0%
TCAAATTAAAGCCATGAAAC+AGG + Chr2:9796239-9796258 MsG0280007042.01.T01:CDS 30.0%
TCAAGTACTTATTACCTCTT+GGG + Chr2:9791311-9791330 MsG0280007042.01.T01:CDS 30.0%
TCAATTCCGCATTGTATAAA+AGG - Chr2:9794325-9794344 None:intergenic 30.0%
TCCGAATGAAGAATAATTGT+AGG - Chr2:9793392-9793411 None:intergenic 30.0%
TCCTATACTGTTATGTTTCT+GGG + Chr2:9791833-9791852 MsG0280007042.01.T01:intron 30.0%
TGAAAGATTCATGTTTGGTT+CGG + Chr2:9794562-9794581 MsG0280007042.01.T01:intron 30.0%
TGAATAGGAGAAACTTATCA+TGG + Chr2:9792996-9793015 MsG0280007042.01.T01:intron 30.0%
TGAATTAGTCGAATTTGAAG+AGG + Chr2:9795280-9795299 MsG0280007042.01.T01:CDS 30.0%
TTAGATTAATTCGATCCATG+TGG + Chr2:9792436-9792455 MsG0280007042.01.T01:intron 30.0%
TTCCTATACTGTTATGTTTC+TGG + Chr2:9791832-9791851 MsG0280007042.01.T01:intron 30.0%
TTCGTAATAGAAGAGACATT+TGG - Chr2:9795945-9795964 None:intergenic 30.0%
TTGATTCTATGATCCCTATA+GGG + Chr2:9795587-9795606 MsG0280007042.01.T01:intron 30.0%
! AAGCTTTAATATTTATGGGC+TGG + Chr2:9793196-9793215 MsG0280007042.01.T01:intron 30.0%
! ATTGATTCTATGATCCCTAT+AGG + Chr2:9795586-9795605 MsG0280007042.01.T01:intron 30.0%
! CAATTTTTCTCGTTCTATCT+CGG - Chr2:9794794-9794813 None:intergenic 30.0%
! CGATTCATTTTGAACAACAA+AGG + Chr2:9794872-9794891 MsG0280007042.01.T01:intron 30.0%
! CTTTTCTTTGCTTCATTTAC+TGG + Chr2:9793819-9793838 MsG0280007042.01.T01:intron 30.0%
! GTTTTACAACAAGCATTACA+AGG + Chr2:9794919-9794938 MsG0280007042.01.T01:intron 30.0%
! TCTCTATCAACCAAGAATTT+TGG + Chr2:9794121-9794140 MsG0280007042.01.T01:intron 30.0%
! TTATGGTCTTGATGAAGTAA+TGG + Chr2:9795253-9795272 MsG0280007042.01.T01:CDS 30.0%
!! ATTTTTGTTTCGAATTGGTC+AGG + Chr2:9791511-9791530 MsG0280007042.01.T01:intron 30.0%
!! TAAGAGGTATCGTTCTTATA+GGG + Chr2:9793534-9793553 MsG0280007042.01.T01:intron 30.0%
!! TCACTTAGTTTTCGACTTTT+CGG + Chr2:9791750-9791769 MsG0280007042.01.T01:intron 30.0%
!! TTTCTGGGATTATTTACAAG+CGG + Chr2:9791848-9791867 MsG0280007042.01.T01:intron 30.0%
!! TTTTTGTTTCGAATTGGTCA+GGG + Chr2:9791512-9791531 MsG0280007042.01.T01:intron 30.0%
!!! ATTACTTAGTCTGGCTTTTA+TGG + Chr2:9793173-9793192 MsG0280007042.01.T01:intron 30.0%
!!! GACAACTCTTAGTTTTTTAG+GGG + Chr2:9792540-9792559 MsG0280007042.01.T01:intron 30.0%
AAAGGACAAAAAATAGGGTG+AGG + Chr2:9792477-9792496 MsG0280007042.01.T01:intron 35.0%
AAATTTCAGCTTCGGAATCT+CGG + Chr2:9795489-9795508 MsG0280007042.01.T01:CDS 35.0%
AAGGACAAAAAATAGGGTGA+GGG + Chr2:9792478-9792497 MsG0280007042.01.T01:intron 35.0%
AATCAGACCAGCTATTAATG+TGG + Chr2:9796185-9796204 MsG0280007042.01.T01:CDS 35.0%
ACCATCAATAGGTTTAGCTA+GGG - Chr2:9795462-9795481 None:intergenic 35.0%
ACTAATTTCATCTGCACGAA+TGG - Chr2:9795138-9795157 None:intergenic 35.0%
ACTCAGATTGGAGAAGAATA+TGG + Chr2:9791453-9791472 MsG0280007042.01.T01:CDS 35.0%
ATCAGACCAGCTATTAATGT+GGG + Chr2:9796186-9796205 MsG0280007042.01.T01:CDS 35.0%
ATTCCGCATTGTATAAAAGG+AGG - Chr2:9794322-9794341 None:intergenic 35.0%
ATTGCGTCTAAACTTCAAAC+TGG - Chr2:9794170-9794189 None:intergenic 35.0%
CATTGGACTAAATAAAGGGA+CGG - Chr2:9793438-9793457 None:intergenic 35.0%
CCAGCGAGAATTAATTATTG+GGG + Chr2:9795615-9795634 MsG0280007042.01.T01:intron 35.0%
CCTGCTACTACTCTAAATTT+AGG + Chr2:9792697-9792716 MsG0280007042.01.T01:intron 35.0%
CGCTCATTGGACTAAATAAA+GGG - Chr2:9793442-9793461 None:intergenic 35.0%
CGGATTTCTAACAACTAGAA+TGG - Chr2:9791364-9791383 None:intergenic 35.0%
CTCAAGTACTTATTACCTCT+TGG + Chr2:9791310-9791329 MsG0280007042.01.T01:CDS 35.0%
GAAATACCCACATTAATAGC+TGG - Chr2:9796195-9796214 None:intergenic 35.0%
GAGTTACATTTACGTACGAT+CGG + Chr2:9794976-9794995 MsG0280007042.01.T01:intron 35.0%
GATTAATCAAGTGCAACAGA+GGG + Chr2:9794897-9794916 MsG0280007042.01.T01:intron 35.0%
GCCAGCGAGAATTAATTATT+GGG + Chr2:9795614-9795633 MsG0280007042.01.T01:intron 35.0%
GGCTTATATAGGTGAATCTA+TGG + Chr2:9791903-9791922 MsG0280007042.01.T01:intron 35.0%
GGGTACTTTATTACTTAGTC+TGG + Chr2:9793164-9793183 MsG0280007042.01.T01:intron 35.0%
TAGGATTCGAGAATCATTCT+TGG - Chr2:9792569-9792588 None:intergenic 35.0%
TCCCAGAAACATAACAGTAT+AGG - Chr2:9791837-9791856 None:intergenic 35.0%
TGAAATACCCGCATAGAAAT+AGG - Chr2:9791640-9791659 None:intergenic 35.0%
TGATTAAAGTGTGACGTTCA+CGG - Chr2:9795885-9795904 None:intergenic 35.0%
TTAAGTTCTCAGTTAGGTGA+AGG + Chr2:9796039-9796058 MsG0280007042.01.T01:CDS 35.0%
TTTAGTAAGAAGTCATTCGC+CGG - Chr2:9794028-9794047 None:intergenic 35.0%
! AATGAAAAAGTGCAGTTGGT+TGG - Chr2:9793982-9794001 None:intergenic 35.0%
! CCTAAATTTAGAGTAGTAGC+AGG - Chr2:9792700-9792719 None:intergenic 35.0%
! GAAAGATTCATGTTTGGTTC+GGG + Chr2:9794563-9794582 MsG0280007042.01.T01:intron 35.0%
! GATTCCAGCATTGAATAGAT+CGG - Chr2:9796169-9796188 None:intergenic 35.0%
! TGGTAATGCTCCAAAATTCT+TGG - Chr2:9794134-9794153 None:intergenic 35.0%
! TGTAGGCATTGCTTTGAATT+TGG + Chr2:9795307-9795326 MsG0280007042.01.T01:CDS 35.0%
!! AAACTGGTTAGCTTTAACCA+TGG - Chr2:9794154-9794173 None:intergenic 35.0%
!! CTAAGAGGTATCGTTCTTAT+AGG + Chr2:9793533-9793552 MsG0280007042.01.T01:intron 35.0%
!! TATTTTTGCTACCTTAGCTG+CGG + Chr2:9791882-9791901 MsG0280007042.01.T01:intron 35.0%
!! TTTTGTTTCGAATTGGTCAG+GGG + Chr2:9791513-9791532 MsG0280007042.01.T01:intron 35.0%
!!! AGAATTTTGGAGCATTACCA+TGG + Chr2:9794134-9794153 MsG0280007042.01.T01:intron 35.0%
AAGCTGAAACATCTCCTGAT+TGG - Chr2:9796095-9796114 None:intergenic 40.0%
AAGGAAAGTAGAAACGGAAG+CGG + Chr2:9794744-9794763 MsG0280007042.01.T01:intron 40.0%
ACCAGTAAGTGAGGGTTATT+TGG + Chr2:9795421-9795440 MsG0280007042.01.T01:CDS 40.0%
ACGCAAAATCAATTGGCAAG+AGG + Chr2:9796345-9796364 MsG0280007042.01.T01:CDS 40.0%
AGCTGAAACATCTCCTGATT+GGG - Chr2:9796094-9796113 None:intergenic 40.0%
AGGACAAAAAATAGGGTGAG+GGG + Chr2:9792479-9792498 MsG0280007042.01.T01:intron 40.0%
AGTTCCAATAAACGAACCCA+CGG - Chr2:9791480-9791499 None:intergenic 40.0%
ATAGCAGCAATGAAAGTCCA+CGG - Chr2:9793303-9793322 None:intergenic 40.0%
ATCGGTAAAAGGATTGGAGT+TGG - Chr2:9791699-9791718 None:intergenic 40.0%
ATTATTGGGGACAGACAAAC+AGG + Chr2:9795628-9795647 MsG0280007042.01.T01:CDS 40.0%
ATTTCTCCTCGACCATCAAT+AGG - Chr2:9795473-9795492 None:intergenic 40.0%
CAATGAATCGCGAAATGCTA+TGG - Chr2:9794085-9794104 None:intergenic 40.0%
CATAGCATTTCGCGATTCAT+TGG + Chr2:9794083-9794102 MsG0280007042.01.T01:intron 40.0%
CCAGTAAGTGAGGGTTATTT+GGG + Chr2:9795422-9795441 MsG0280007042.01.T01:CDS 40.0%
CCCCAATAATTAATTCTCGC+TGG - Chr2:9795618-9795637 None:intergenic 40.0%
CCGCTTAAGGAAAGTAGAAA+CGG + Chr2:9794738-9794757 MsG0280007042.01.T01:intron 40.0%
CCGTTTCTACTTTCCTTAAG+CGG - Chr2:9794741-9794760 None:intergenic 40.0%
CGATTAATCAAGTGCAACAG+AGG + Chr2:9794896-9794915 MsG0280007042.01.T01:intron 40.0%
CGTTTCTACTTTCCTTAAGC+GGG - Chr2:9794740-9794759 None:intergenic 40.0%
CTAAATAAAGGGACGGAAGA+AGG - Chr2:9793431-9793450 None:intergenic 40.0%
CTAGAAAAACGTGCATGATC+CGG + Chr2:9794006-9794025 MsG0280007042.01.T01:intron 40.0%
GAAGCAGAGGACAAAATAAG+GGG + Chr2:9793144-9793163 MsG0280007042.01.T01:CDS 40.0%
GACCATCAATAGGTTTAGCT+AGG - Chr2:9795463-9795482 None:intergenic 40.0%
GACGACATTGCTCGTATTTA+TGG + Chr2:9795236-9795255 MsG0280007042.01.T01:CDS 40.0%
GATAGCAATTACAACCCAAG+AGG - Chr2:9791328-9791347 None:intergenic 40.0%
GATATATCTGCTGTCGAAGT+AGG + Chr2:9791246-9791265 MsG0280007042.01.T01:CDS 40.0%
GCGCTCATTGGACTAAATAA+AGG - Chr2:9793443-9793462 None:intergenic 40.0%
GGAACGTCTGGAAATAATAC+CGG - Chr2:9795533-9795552 None:intergenic 40.0%
GGAAGCAGAGGACAAAATAA+GGG + Chr2:9793143-9793162 MsG0280007042.01.T01:CDS 40.0%
GGCCAGCGAGAATTAATTAT+TGG + Chr2:9795613-9795632 MsG0280007042.01.T01:intron 40.0%
TATGATCGCATCTCCTCTTA+TGG - Chr2:9793781-9793800 None:intergenic 40.0%
TCGAGGAGAAATTTCAGCTT+CGG + Chr2:9795481-9795500 MsG0280007042.01.T01:CDS 40.0%
TCTCACACTCAATTCCGTAT+AGG - Chr2:9794531-9794550 None:intergenic 40.0%
TTTACAAGAAAGAGGGGCAA+TGG + Chr2:9795762-9795781 MsG0280007042.01.T01:CDS 40.0%
TTTACCAGCTACCTGTTTCA+TGG - Chr2:9796253-9796272 None:intergenic 40.0%
! ACAGGTACTGTACTTCAAGT+AGG + Chr2:9795212-9795231 MsG0280007042.01.T01:intron 40.0%
! ACGCCTCCTTTTATACAATG+CGG + Chr2:9794316-9794335 MsG0280007042.01.T01:intron 40.0%
! GGTGTTGTATTAATGGGTGA+TGG + Chr2:9795344-9795363 MsG0280007042.01.T01:CDS 40.0%
! GTAAAAGGATTGGAGTTGGT+TGG - Chr2:9791695-9791714 None:intergenic 40.0%
!! GAATTTGAAGAGGGTACTGT+AGG + Chr2:9795290-9795309 MsG0280007042.01.T01:CDS 40.0%
!! GATGGTTTGCTGATACAAGA+GGG + Chr2:9795362-9795381 MsG0280007042.01.T01:CDS 40.0%
!! GTCAGTAGCCTATTTCTATG+CGG + Chr2:9791629-9791648 MsG0280007042.01.T01:intron 40.0%
!! TCAGTAGCCTATTTCTATGC+GGG + Chr2:9791630-9791649 MsG0280007042.01.T01:intron 40.0%
!! TGATGGTTTGCTGATACAAG+AGG + Chr2:9795361-9795380 MsG0280007042.01.T01:CDS 40.0%
!! TGGTCAAAAAGCATCTTCTG+TGG + Chr2:9795723-9795742 MsG0280007042.01.T01:CDS 40.0%
!!! CTTATTTTGTCCTCTGCTTC+CGG - Chr2:9793144-9793163 None:intergenic 40.0%
AAAGCCATGAAACAGGTAGC+TGG + Chr2:9796246-9796265 MsG0280007042.01.T01:CDS 45.0%
AAGAAATTCTGACCGGACGT+TGG - Chr2:9791396-9791415 None:intergenic 45.0%
AAGTAGAAACGGAAGCGGAT+CGG + Chr2:9794749-9794768 MsG0280007042.01.T01:intron 45.0%
ACAAGCATTACAAGGAGCTC+TGG + Chr2:9794927-9794946 MsG0280007042.01.T01:intron 45.0%
ACAGAAGCAGCAGAAATCAG+TGG - Chr2:9793024-9793043 None:intergenic 45.0%
ACCTATATAAGCCGCAGCTA+AGG - Chr2:9791896-9791915 None:intergenic 45.0%
ACCTTAGCTGCGGCTTATAT+AGG + Chr2:9791892-9791911 MsG0280007042.01.T01:intron 45.0%
ATAAGCCTGTGCTTGTTTGG+AGG - Chr2:9795920-9795939 None:intergenic 45.0%
ATCTGTTCTTCCACAGTGAG+AGG - Chr2:9796411-9796430 None:intergenic 45.0%
CAAGCATTACAAGGAGCTCT+GGG + Chr2:9794928-9794947 MsG0280007042.01.T01:intron 45.0%
CAATACCTCGCTCCTTATAC+AGG + Chr2:9795832-9795851 MsG0280007042.01.T01:CDS 45.0%
CCAATAGTTGAGACCCAATC+AGG + Chr2:9796078-9796097 MsG0280007042.01.T01:CDS 45.0%
CCCAAATAACCCTCACTTAC+TGG - Chr2:9795425-9795444 None:intergenic 45.0%
CCTGATTGGGTCTCAACTAT+TGG - Chr2:9796081-9796100 None:intergenic 45.0%
CGGAAGCAGAGGACAAAATA+AGG + Chr2:9793142-9793161 MsG0280007042.01.T01:CDS 45.0%
CGTGTATGAGCCTCTTCAAA+CGG + Chr2:9795552-9795571 MsG0280007042.01.T01:intron 45.0%
CGTTTGAAGAGGCTCATACA+CGG - Chr2:9795554-9795573 None:intergenic 45.0%
CTTCTATTACGAAGACCACC+AGG + Chr2:9795952-9795971 MsG0280007042.01.T01:CDS 45.0%
GACGTGAGCAAAACTCAGAT+TGG + Chr2:9791441-9791460 MsG0280007042.01.T01:CDS 45.0%
GCAATAAGTCCCGTTTGAAG+AGG - Chr2:9795565-9795584 None:intergenic 45.0%
GCCCTAGCTAAACCTATTGA+TGG + Chr2:9795458-9795477 MsG0280007042.01.T01:CDS 45.0%
GCTCAGATACCAGTAAGTGA+GGG + Chr2:9795413-9795432 MsG0280007042.01.T01:CDS 45.0%
GCTGATACAAGAGGGAAGTT+CGG + Chr2:9795370-9795389 MsG0280007042.01.T01:CDS 45.0%
GGAAGTTCGGTAAAAGCAAC+AGG + Chr2:9795383-9795402 MsG0280007042.01.T01:CDS 45.0%
GGACAAAAAATAGGGTGAGG+GGG + Chr2:9792480-9792499 MsG0280007042.01.T01:intron 45.0%
GGTATCAAACCCGAAACTTC+CGG - Chr2:9793852-9793871 None:intergenic 45.0%
GGTATTTCCGTTTCCAGAGT+TGG + Chr2:9796207-9796226 MsG0280007042.01.T01:CDS 45.0%
GGTCTTGATGAAGTAATGGC+AGG + Chr2:9795257-9795276 MsG0280007042.01.T01:CDS 45.0%
GTCTGGAAATAATACCGGAG+CGG - Chr2:9795528-9795547 None:intergenic 45.0%
GTGTATGAGCCTCTTCAAAC+GGG + Chr2:9795553-9795572 MsG0280007042.01.T01:intron 45.0%
TAAGCCTGTGCTTGTTTGGA+GGG - Chr2:9795919-9795938 None:intergenic 45.0%
TCACGTCTCGGATGAATTCA+AGG - Chr2:9791428-9791447 None:intergenic 45.0%
TCTGCCGATCTATTCAATGC+TGG + Chr2:9796162-9796181 MsG0280007042.01.T01:CDS 45.0%
TCTGGAAATAATACCGGAGC+GGG - Chr2:9795527-9795546 None:intergenic 45.0%
TGCTCAGATACCAGTAAGTG+AGG + Chr2:9795412-9795431 MsG0280007042.01.T01:CDS 45.0%
TGGAGAAGAATATGGTCCGT+GGG + Chr2:9791461-9791480 MsG0280007042.01.T01:intron 45.0%
TTCCGTTTCCAGAGTTGGAT+CGG + Chr2:9796212-9796231 MsG0280007042.01.T01:CDS 45.0%
TTGGAGAAGAATATGGTCCG+TGG + Chr2:9791460-9791479 MsG0280007042.01.T01:intron 45.0%
! GCTAAACCTATTGATGGTCG+AGG + Chr2:9795464-9795483 MsG0280007042.01.T01:CDS 45.0%
! TCTGAGTTTTGCTCACGTCT+CGG - Chr2:9791440-9791459 None:intergenic 45.0%
!! GCGAGGTATTGTAATGTAGC+TGG - Chr2:9795823-9795842 None:intergenic 45.0%
!! TAAATAAAGGGGGCGCTCAT+TGG - Chr2:9793455-9793474 None:intergenic 45.0%
!! ATAATAATAATAATATTCAT+TGG - Chr2:9791986-9792005 None:intergenic 5.0%
AGCATCTTCTGTGGCTCAAG+TGG + Chr2:9795732-9795751 MsG0280007042.01.T01:CDS 50.0%
ATCAAACCCGAAACTTCCGG+CGG - Chr2:9793849-9793868 None:intergenic 50.0%
CACAGTGAGAGGAGCTGATT+GGG - Chr2:9796400-9796419 None:intergenic 50.0%
CCGCAAACTATTCCAACGTC+CGG + Chr2:9791381-9791400 MsG0280007042.01.T01:CDS 50.0%
CCGGACGTTGGAATAGTTTG+CGG - Chr2:9791384-9791403 None:intergenic 50.0%
CTGCTTCTGTTATCGCTGCT+GGG + Chr2:9793034-9793053 MsG0280007042.01.T01:CDS 50.0%
GCGATAAGCCTGTGCTTGTT+TGG - Chr2:9795923-9795942 None:intergenic 50.0%
GCTTCTATTGGACCTGGAGT+TGG + Chr2:9793072-9793091 MsG0280007042.01.T01:CDS 50.0%
GGCTTTCTCCAGCTGTTCAA+CGG - Chr2:9794713-9794732 None:intergenic 50.0%
GGTGCAGCTAATTCTCCATG+AGG - Chr2:9791568-9791587 None:intergenic 50.0%
GTTAATCGAATCTCCCGCTC+CGG + Chr2:9795511-9795530 MsG0280007042.01.T01:CDS 50.0%
TCCAATAGAAGCAAGCCCGA+CGG - Chr2:9793064-9793083 None:intergenic 50.0%
TCCTTATACAGGTGCAGCTC+TGG + Chr2:9795843-9795862 MsG0280007042.01.T01:CDS 50.0%
TCTATGATCCCTATAGGGCG+TGG + Chr2:9795592-9795611 MsG0280007042.01.T01:intron 50.0%
TGGTCCGTGGGTTCGTTTAT+TGG + Chr2:9791473-9791492 MsG0280007042.01.T01:intron 50.0%
TTCATTTACTGGCCATCCGC+CGG + Chr2:9793830-9793849 MsG0280007042.01.T01:intron 50.0%
TTCTGTTATCGCTGCTGGGT+TGG + Chr2:9793038-9793057 MsG0280007042.01.T01:CDS 50.0%
TTGAACAGCTGGAGAAAGCC+CGG + Chr2:9794713-9794732 MsG0280007042.01.T01:intron 50.0%
TTGGTCAAGGTACAGCTGCA+GGG + Chr2:9793091-9793110 MsG0280007042.01.T01:CDS 50.0%
! ATTGGACCTGGAGTTGGTCA+AGG + Chr2:9793078-9793097 MsG0280007042.01.T01:CDS 50.0%
AGAAGGGATTGCGCGACAAC+CGG + Chr2:9793122-9793141 MsG0280007042.01.T01:CDS 55.0%
AGGCTCATACACGGAACGTC+TGG - Chr2:9795545-9795564 None:intergenic 55.0%
CCAATCAGCTCCTCTCACTG+TGG + Chr2:9796398-9796417 MsG0280007042.01.T01:CDS 55.0%
CCACAGTGAGAGGAGCTGAT+TGG - Chr2:9796401-9796420 None:intergenic 55.0%
CGATCCCTCCAAACAAGCAC+AGG + Chr2:9795912-9795931 MsG0280007042.01.T01:CDS 55.0%
CGTTTCCAGAGTTGGATCGG+CGG + Chr2:9796215-9796234 MsG0280007042.01.T01:CDS 55.0%
CTACTTTCCTTAAGCGGGCC+CGG - Chr2:9794735-9794754 None:intergenic 55.0%
CTGCACCTGTATAAGGAGCG+AGG - Chr2:9795840-9795859 None:intergenic 55.0%
CTGCAGGGCAAGCTGTAGAA+GGG + Chr2:9793106-9793125 MsG0280007042.01.T01:CDS 55.0%
GCCAGAGCTGCACCTGTATA+AGG - Chr2:9795847-9795866 None:intergenic 55.0%
GCTGCTTCTGTTATCGCTGC+TGG + Chr2:9793033-9793052 MsG0280007042.01.T01:CDS 55.0%
GCTGTACCTTGACCAACTCC+AGG - Chr2:9793087-9793106 None:intergenic 55.0%
GTTGGTCAAGGTACAGCTGC+AGG + Chr2:9793090-9793109 MsG0280007042.01.T01:CDS 55.0%
TACTTTCCTTAAGCGGGCCC+GGG - Chr2:9794734-9794753 None:intergenic 55.0%
TGAACAGCTGGAGAAAGCCC+GGG + Chr2:9794714-9794733 MsG0280007042.01.T01:intron 55.0%
! CGCCGATCCAACTCTGGAAA+CGG - Chr2:9796217-9796236 None:intergenic 55.0%
! GCGGATCGGTTTCGAGTGAA+TGG + Chr2:9794763-9794782 MsG0280007042.01.T01:intron 55.0%
! GGGCTTGCTTCTATTGGACC+TGG + Chr2:9793066-9793085 MsG0280007042.01.T01:CDS 55.0%
AACCCGAAACTTCCGGCGGA+TGG - Chr2:9793845-9793864 None:intergenic 60.0%
GCTGCAGGGCAAGCTGTAGA+AGG + Chr2:9793105-9793124 MsG0280007042.01.T01:CDS 60.0%
GGAAGCAGCCGTTGAACAGC+TGG + Chr2:9794702-9794721 MsG0280007042.01.T01:intron 60.0%
TGGCCATCCGCCGGAAGTTT+CGG + Chr2:9793839-9793858 MsG0280007042.01.T01:intron 60.0%
TTGAGCCGCCGATCCAACTC+TGG - Chr2:9796223-9796242 None:intergenic 60.0%
! GCCGTCGGGCTTGCTTCTAT+TGG + Chr2:9793060-9793079 MsG0280007042.01.T01:CDS 60.0%
! GGTCAGGGGCTCTTTTGCCT+TGG + Chr2:9791527-9791546 MsG0280007042.01.T01:intron 60.0%
AGAAAGCCCGGGCCCGCTTA+AGG + Chr2:9794725-9794744 MsG0280007042.01.T01:intron 65.0%
CCAGGTCGCGAAGCGTATCC+CGG + Chr2:9795970-9795989 MsG0280007042.01.T01:CDS 65.0%
CTCGCTGGCCACGCCCTATA+GGG - Chr2:9795603-9795622 None:intergenic 65.0%
GGATACGCTTCGCGACCTGG+TGG - Chr2:9795970-9795989 None:intergenic 65.0%
GGCCATCCGCCGGAAGTTTC+GGG + Chr2:9793840-9793859 MsG0280007042.01.T01:intron 65.0%
TCTCGCTGGCCACGCCCTAT+AGG - Chr2:9795604-9795623 None:intergenic 65.0%
TGCGCGACAACCGGAAGCAG+AGG + Chr2:9793131-9793150 MsG0280007042.01.T01:CDS 65.0%
!! ATCGCTGCTGGGTTGGCCGT+CGG + Chr2:9793045-9793064 MsG0280007042.01.T01:CDS 65.0%
CCGGGATACGCTTCGCGACC+TGG - Chr2:9795973-9795992 None:intergenic 70.0%
!! TCGCTGCTGGGTTGGCCGTC+GGG + Chr2:9793046-9793065 MsG0280007042.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 9791201 9796509 9791201 ID=MsG0280007042.01;Name=MsG0280007042.01
Chr2 mRNA 9791201 9796509 9791201 ID=MsG0280007042.01.T01;Parent=MsG0280007042.01;Name=MsG0280007042.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0|0|1|0.8|0.83|6|0|596
Chr2 exon 9791201 9791474 9791201 ID=MsG0280007042.01.T01:exon:2790;Parent=MsG0280007042.01.T01
Chr2 exon 9791533 9791628 9791533 ID=MsG0280007042.01.T01:exon:2791;Parent=MsG0280007042.01.T01
Chr2 exon 9792560 9792609 9792560 ID=MsG0280007042.01.T01:exon:2792;Parent=MsG0280007042.01.T01
Chr2 exon 9793003 9793165 9793003 ID=MsG0280007042.01.T01:exon:2793;Parent=MsG0280007042.01.T01
Chr2 exon 9795216 9795532 9795216 ID=MsG0280007042.01.T01:exon:2794;Parent=MsG0280007042.01.T01
Chr2 exon 9795619 9796509 9795619 ID=MsG0280007042.01.T01:exon:2795;Parent=MsG0280007042.01.T01
Chr2 CDS 9791201 9791474 9791201 ID=MsG0280007042.01.T01:cds;Parent=MsG0280007042.01.T01
Chr2 CDS 9791533 9791628 9791533 ID=MsG0280007042.01.T01:cds;Parent=MsG0280007042.01.T01
Chr2 CDS 9792560 9792609 9792560 ID=MsG0280007042.01.T01:cds;Parent=MsG0280007042.01.T01
Chr2 CDS 9793003 9793165 9793003 ID=MsG0280007042.01.T01:cds;Parent=MsG0280007042.01.T01
Chr2 CDS 9795216 9795532 9795216 ID=MsG0280007042.01.T01:cds;Parent=MsG0280007042.01.T01
Chr2 CDS 9795619 9796509 9795619 ID=MsG0280007042.01.T01:cds;Parent=MsG0280007042.01.T01
Gene Sequence

>MsG0280007042.01.T01

ATGAATGTTCTATTATGTTACATCAACACATTAAACAGATTCTATGATATATCTGCTGTCGAAGTAGGTCAACATTTCTATTGGCAAATAGGGGATTTTCAAGTGCATGCTCAAGTACTTATTACCTCTTGGGTTGTAATTGCTATCTTATTAATTTCAACCATTCTAGTTGTTAGAAATCCGCAAACTATTCCAACGTCCGGTCAGAATTTCTTTGAATATGTCCTTGAATTCATCCGAGACGTGAGCAAAACTCAGATTGGAGAAGAATATGGGGCTCTTTTGCCTTGGAAAATTATAAAGTTACCTCATGGAGAATTAGCTGCACCCACAAATGATATAAATACTACTGTTGCATTAGCTTACTTACGGGTTTCCAAGAATGATTCTCGAATCCTATTGAATCCTATTGAATCTAAGGAGAAACTTATCATGGATCCACTGATTTCTGCTGCTTCTGTTATCGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGAGTTGGTCAAGGTACAGCTGCAGGGCAAGCTGTAGAAGGGATTGCGCGACAACCGGAAGCAGAGGACAAAATAAGGGGTACTGTACTTCAAGTAGGCGACGACATTGCTCGTATTTATGGTCTTGATGAAGTAATGGCAGGTGAATTAGTCGAATTTGAAGAGGGTACTGTAGGCATTGCTTTGAATTTGGAATCCAAAAATGTTGGTGTTGTATTAATGGGTGATGGTTTGCTGATACAAGAGGGAAGTTCGGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGGTTATTTGGGTCGTGTTGTAAATGCCCTAGCTAAACCTATTGATGGTCGAGGAGAAATTTCAGCTTCGGAATCTCGGTTAATCGAATCTCCCGCTCCGCGAGAATTAATTATTGGGGACAGACAAACAGGTAAAACAGCAGTAGCAACAGATACAATTCTCAATCAACAGGGACAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCATCTTCTGTGGCTCAAGTGGTAACTACTTTACAAGAAAGAGGGGCAATGGAGTACACTATTATAGTGGCTGAAACAGCAAATTCTCCAGCTACATTACAATACCTCGCTCCTTATACAGGTGCAGCTCTGGCTGAATATTTTATGTACCGTGAACGTCACACTTTAATCATTTATGACGATCCCTCCAAACAAGCACAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACCAGGTCGCGAAGCGTATCCCGGAGATGTTTTTTATTTACATTCTCGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCAGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTTTTATCTGCCGATCTATTCAATGCTGGAATCAGACCAGCTATTAATGTGGGTATTTCCGTTTCCAGAGTTGGATCGGCGGCTCAAATTAAAGCCATGAAACAGGTAGCTGGTAAATTAAAATTGGAATTGGCACAATTCGCAGAATTAGAAGCTTTTGCACAATTCGCTTCTGATCTCGATAAAGCTACGCAAAATCAATTGGCAAGAGGTCAACGATTGCGCGAGTTGCTTAAACAATCCCAATCAGCTCCTCTCACTGTGGAAGAACAGATAATAACTATTTATACTGGAACGAATGGTTATCTTGATTCATTAGAAATGATCAGGTACGTAAATTTCTCGTTGAGTTAA

Protein sequence

>MsG0280007042.01.T01

MNVLLCYINTLNRFYDISAVEVGQHFYWQIGDFQVHAQVLITSWVVIAILLISTILVVRNPQTIPTSGQNFFEYVLEFIRDVSKTQIGEEYGALLPWKIIKLPHGELAAPTNDINTTVALAYLRVSKNDSRILLNPIESKEKLIMDPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEDKIRGTVLQVGDDIARIYGLDEVMAGELVEFEEGTVGIALNLESKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEGYLGRVVNALAKPIDGRGEISASESRLIESPAPRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIIVAETANSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIITIYTGTNGYLDSLEMIRYVNFSLS*