AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014230.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014230.01.T01 MTR_3g053220 77.635 389 51 6 4 356 278 666 0.0 593
MsG0380014230.01.T01 MTR_7g104080 36.061 330 176 10 60 356 275 602 1.52e-62 213
MsG0380014230.01.T01 MTR_7g104080 36.061 330 176 10 60 356 275 602 1.29e-61 212
MsG0380014230.01.T01 MTR_7g104080 36.364 330 175 10 60 356 272 599 1.31e-61 212
MsG0380014230.01.T01 MTR_3g115340 32.635 334 187 7 60 355 121 454 4.72e-53 187
MsG0380014230.01.T01 MTR_3g115340 32.635 334 187 9 60 355 192 525 9.57e-53 187
MsG0380014230.01.T01 MTR_3g115340 32.635 334 187 9 60 355 192 525 1.15e-52 186
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014230.01.T01 AT3G20440 66.760 358 102 4 9 356 281 631 9.96e-169 493
MsG0380014230.01.T01 AT3G20440 63.255 381 107 5 9 356 281 661 8.99e-167 489
MsG0380014230.01.T01 AT3G20440 62.435 386 107 6 9 356 281 666 1.94e-164 483
MsG0380014230.01.T01 AT2G36390 37.048 332 172 11 60 357 262 590 6.86e-63 215
MsG0380014230.01.T01 AT5G03650 35.562 329 179 7 60 356 227 554 3.12e-59 204

Find 90 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGCTATTGTAACAATATT+TGG 0.080012 3:+51653860 None:intergenic
CGAATTCTTTCTTGCCATTC+TGG 0.127754 3:+51658150 None:intergenic
CGCAATGACTTTGGTACTTT+GGG 0.254473 3:+51657400 None:intergenic
TTCCATTTGTAAGCATCTTC+AGG 0.263780 3:+51657432 None:intergenic
ATCGCCATATTTGAACATTC+TGG 0.280985 3:+51654634 None:intergenic
CTGCTATTGTAACAATATTT+GGG 0.313627 3:+51653861 None:intergenic
CATTGGAGCGGGTACCTGCT+TGG 0.318300 3:-51657999 MsG0380014230.01.T01:CDS
ACTAGGATTGCTTGTATTCA+TGG 0.318974 3:-51655510 MsG0380014230.01.T01:CDS
CCAACTTCTCAAGGTGGACT+TGG 0.342269 3:-51653081 MsG0380014230.01.T01:CDS
CCGCAATGACTTTGGTACTT+TGG 0.343143 3:+51657399 None:intergenic
AGATGCTTACAAATGGAAAA+TGG 0.360171 3:-51657427 MsG0380014230.01.T01:CDS
GTTGAGGAGTATCAAATTGA+TGG 0.362473 3:-51654366 MsG0380014230.01.T01:CDS
TATGCCACTAGTAGTCGATA+TGG 0.363735 3:-51656541 MsG0380014230.01.T01:CDS
GTGCCTCCTTGTCAACATAT+TGG 0.370280 3:+51653927 None:intergenic
GGAACCAGAATGTTCAAATA+TGG 0.372045 3:-51654638 MsG0380014230.01.T01:CDS
TCCTTCTATCAAACTTGAAC+TGG 0.377613 3:-51654595 MsG0380014230.01.T01:intron
TGAAACCTCCTATAGCATAT+TGG 0.389407 3:-51658122 MsG0380014230.01.T01:CDS
ACCAGTTCAAGTTTGATAGA+AGG 0.390033 3:+51654594 None:intergenic
CCATCATCAATCACAGCATA+AGG 0.405468 3:+51658207 None:intergenic
CATTGATGACCGCTGTATCT+AGG 0.413688 3:-51657034 MsG0380014230.01.T01:CDS
GTTTACTTTAACACTCCAAA+TGG 0.417722 3:-51658024 MsG0380014230.01.T01:CDS
TAACACTCCAAATGGGTCAT+TGG 0.422973 3:-51658016 MsG0380014230.01.T01:CDS
CCAAGTCCACCTTGAGAAGT+TGG 0.430436 3:+51653081 None:intergenic
AGGAAGGCACGAGTAAAGTT+AGG 0.436685 3:-51657014 MsG0380014230.01.T01:CDS
ATTGGAGCGGGTACCTGCTT+GGG 0.437025 3:-51657998 MsG0380014230.01.T01:CDS
TAGATGAAAGTGAATGGAAC+TGG 0.438178 3:+51654340 None:intergenic
GTTATGTATTCAGAATTAGA+TGG 0.440579 3:-51657489 MsG0380014230.01.T01:intron
GTTGGATTATCGATGTTTGA+TGG 0.449960 3:-51655452 MsG0380014230.01.T01:CDS
ACTAATCGCTTGAAGTCATC+AGG 0.452023 3:+51656514 None:intergenic
GTCATGCTCCATTCATGATC+AGG 0.452053 3:+51652997 None:intergenic
ACCCGCTCCAATGACCCATT+TGG 0.454747 3:+51658009 None:intergenic
CCTTATGCTGTGATTGATGA+TGG 0.458499 3:-51658207 MsG0380014230.01.T01:CDS
TCCATTTGTAAGCATCTTCA+GGG 0.459860 3:+51657433 None:intergenic
TTCCTCATGGAAGCAAGTAC+AGG 0.460006 3:-51658047 MsG0380014230.01.T01:CDS
CGACATATTTAATGTGAAAG+TGG 0.460777 3:-51658175 MsG0380014230.01.T01:CDS
GGCAAGCTTATGCGATCCAC+TGG 0.467208 3:-51657464 MsG0380014230.01.T01:CDS
AAGGAATGGGCAGCAAAGAA+TGG 0.482395 3:-51658236 None:intergenic
AAGAACATGTAGAATCTCAT+TGG 0.489344 3:+51653886 None:intergenic
CCCCTGAAGATGCTTACAAA+TGG 0.494197 3:-51657434 MsG0380014230.01.T01:CDS
CTTGCTTCCATGAGGAATGC+CGG 0.500608 3:+51658053 None:intergenic
TTTACTTTAACACTCCAAAT+GGG 0.508358 3:-51658023 MsG0380014230.01.T01:CDS
ACCTTTCTGCGCCCGAGATG+TGG 0.512340 3:-51653041 MsG0380014230.01.T01:CDS
GGCACTATTATATCTTATCA+TGG 0.512431 3:-51653909 MsG0380014230.01.T01:CDS
TTGCTTCCATGAGGAATGCC+GGG 0.516508 3:+51658054 None:intergenic
AGAAAAGTTGACCACATCTC+GGG 0.517169 3:+51653030 None:intergenic
AGACTGTTCCTGATCATGAA+TGG 0.517390 3:-51653005 MsG0380014230.01.T01:CDS
GTCTCAAGCCAATATGCTAT+AGG 0.520358 3:+51658114 None:intergenic
CATCATCAATCACAGCATAA+GGG 0.524338 3:+51658208 None:intergenic
GATCAGGCAACATATTATCC+TGG 0.529512 3:-51653114 MsG0380014230.01.T01:intron
ATATCATAGATGAAAGTGAA+TGG 0.534524 3:+51654334 None:intergenic
ATGTTTGAACAGGTGGGTTG+AGG 0.548955 3:-51654382 MsG0380014230.01.T01:intron
CATTCCGATTCATACCCTCA+TGG 0.549027 3:+51656967 None:intergenic
TGCACATATGTAGCCCAAGC+AGG 0.550033 3:+51657985 None:intergenic
TCCAAATGGGTCATTGGAGC+GGG 0.552272 3:-51658010 MsG0380014230.01.T01:CDS
TCATGAATGGAGCATGACTA+AGG 0.552407 3:-51652992 MsG0380014230.01.T01:CDS
CACGTAAAGGCAGGAAGGCA+TGG 0.557801 3:-51658092 MsG0380014230.01.T01:CDS
GGCTTGAGACACGTAAAGGC+AGG 0.560277 3:-51658101 MsG0380014230.01.T01:CDS
TATATGCCCGGCATTCCTCA+TGG 0.560815 3:-51658060 MsG0380014230.01.T01:CDS
ACCACATCTCGGGCGCAGAA+AGG 0.561430 3:+51653040 None:intergenic
GAGAAAAGTTGACCACATCT+CGG 0.564369 3:+51653029 None:intergenic
ATGTGAAAGTGGATCCAGAA+TGG 0.566609 3:-51658164 MsG0380014230.01.T01:CDS
TTATGTGAGCCAACTTCTCA+AGG 0.571330 3:-51653090 MsG0380014230.01.T01:CDS
GAAGTTGGCTCACATAATCC+AGG 0.576299 3:+51653096 None:intergenic
CCATTTGTAAGCATCTTCAG+GGG 0.581719 3:+51657434 None:intergenic
TATTGGCTTGAGACACGTAA+AGG 0.583787 3:-51658105 MsG0380014230.01.T01:CDS
CATCTGCAGCAGCATACGAA+TGG 0.586248 3:+51655480 None:intergenic
CTCCAAATGGGTCATTGGAG+CGG 0.590001 3:-51658011 MsG0380014230.01.T01:CDS
TCCTCATGGAAGCAAGTACA+GGG 0.595931 3:-51658046 MsG0380014230.01.T01:CDS
TCAAGCCAATATGCTATAGG+AGG 0.598490 3:+51658117 None:intergenic
CATTTGTAAGCATCTTCAGG+GGG 0.599808 3:+51657435 None:intergenic
TGTATTCAGAATTAGATGGA+AGG 0.606611 3:-51657485 MsG0380014230.01.T01:intron
CAGCAACCAATATGTTGACA+AGG 0.607406 3:-51653933 MsG0380014230.01.T01:CDS
CGATTAGTTGATGAGGCACA+TGG 0.610511 3:-51656499 MsG0380014230.01.T01:intron
GATGACCGCTGTATCTAGGA+AGG 0.620326 3:-51657030 MsG0380014230.01.T01:CDS
GTATGCTGCTGCAGATGAGA+TGG 0.622112 3:-51655474 MsG0380014230.01.T01:CDS
GCTGCTGCAGATGAGATGGT+TGG 0.622647 3:-51655470 MsG0380014230.01.T01:CDS
GGTCTTAGTATGATCCATGA+GGG 0.626072 3:-51656981 MsG0380014230.01.T01:intron
CTTCAAGCGATTAGTTGATG+AGG 0.627947 3:-51656506 MsG0380014230.01.T01:CDS
ATCAATCACAGCATAAGGGA+AGG 0.631518 3:+51658212 None:intergenic
GCAAGCTTATGCGATCCACT+GGG 0.647334 3:-51657463 MsG0380014230.01.T01:CDS
TGGTCTTAGTATGATCCATG+AGG 0.655674 3:-51656982 MsG0380014230.01.T01:CDS
GTAAAGTTAGGAAAATCTAG+TGG 0.663429 3:-51657002 MsG0380014230.01.T01:CDS
TGGGCTACATATGTGCAACC+AGG 0.666377 3:-51657979 MsG0380014230.01.T01:intron
ACCCTGTACTTGCTTCCATG+AGG 0.668564 3:+51658045 None:intergenic
TGAGACACGTAAAGGCAGGA+AGG 0.669062 3:-51658097 MsG0380014230.01.T01:CDS
AGTGCCATATCGACTACTAG+TGG 0.671187 3:+51656537 None:intergenic
TCTATGATATATACTCACAA+CGG 0.698211 3:-51654321 MsG0380014230.01.T01:CDS
CAACCAATATGTTGACAAGG+AGG 0.705177 3:-51653930 MsG0380014230.01.T01:CDS
TGTGAGCCAACTTCTCAAGG+TGG 0.708531 3:-51653087 MsG0380014230.01.T01:CDS
TCGTGCCTTCCTAGATACAG+CGG 0.712410 3:+51657025 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTATATAATATAAATTCA+AGG + Chr3:51653965-51653984 None:intergenic 10.0%
!! AATATATAAGATAACTTTAT+TGG - Chr3:51654355-51654374 MsG0380014230.01.T01:CDS 10.0%
!! AGTATATAATATAAATTCAA+GGG + Chr3:51653964-51653983 None:intergenic 10.0%
!!! AAATAAAATATAAGTTTGTT+TGG - Chr3:51654928-51654947 MsG0380014230.01.T01:intron 10.0%
!!! ATTTTTTTTTTTACGAATAT+AGG - Chr3:51655316-51655335 MsG0380014230.01.T01:intron 10.0%
!! AAAAAAAAAAATCCAAGAAA+AGG + Chr3:51655308-51655327 None:intergenic 15.0%
!! AAAACATAATATTATGGAAA+TGG + Chr3:51653652-51653671 None:intergenic 15.0%
!! AGTTATTAGAATTAGAATAA+AGG + Chr3:51656486-51656505 None:intergenic 15.0%
!! ATATTTATACCTTAAAATTG+AGG + Chr3:51657119-51657138 None:intergenic 15.0%
!! ATCAATTTAATAGGTATATT+TGG + Chr3:51654335-51654354 None:intergenic 15.0%
!! GTATATAATATAAATTCAAG+GGG + Chr3:51653963-51653982 None:intergenic 15.0%
!! TATATAATATAAATTCAAGG+GGG + Chr3:51653962-51653981 None:intergenic 15.0%
!! TTATATTATATACTTAATGC+AGG - Chr3:51653970-51653989 MsG0380014230.01.T01:intron 15.0%
!!! ATTATCAGTCATTATTTTTT+TGG - Chr3:51657781-51657800 MsG0380014230.01.T01:intron 15.0%
!!! GTTATGATTTTTTATGTAAA+GGG + Chr3:51655953-51655972 None:intergenic 15.0%
!!! TCATTAAATGAAGATATTTT+TGG + Chr3:51653865-51653884 None:intergenic 15.0%
!!! TCGATAATAATTTAAGATAA+TGG + Chr3:51655591-51655610 None:intergenic 15.0%
!!! TCTATAATTTTCAATACTAA+CGG + Chr3:51654751-51654770 None:intergenic 15.0%
!!! TGTTATGATTTTTTATGTAA+AGG + Chr3:51655954-51655973 None:intergenic 15.0%
!!! TTTTATATTTGAGATTTTGT+TGG - Chr3:51656982-51657001 MsG0380014230.01.T01:CDS 15.0%
!! AAAGCCATAAAGAATTTAAA+AGG + Chr3:51657087-51657106 None:intergenic 20.0%
!! AATATTACAATTACAGATCA+GGG + Chr3:51656344-51656363 None:intergenic 20.0%
!! ACAATCTACTAAATACAATT+CGG + Chr3:51657177-51657196 None:intergenic 20.0%
!! ATATTTAAGAAGAACCTATA+AGG + Chr3:51654470-51654489 None:intergenic 20.0%
!! ATGATTTATGATAGAATCAA+TGG - Chr3:51657837-51657856 MsG0380014230.01.T01:intron 20.0%
!! ATTCAAGAAGCTAAAATAAA+GGG - Chr3:51657689-51657708 MsG0380014230.01.T01:intron 20.0%
!! TAATATTACAATTACAGATC+AGG + Chr3:51656345-51656364 None:intergenic 20.0%
!! TTATACACAGAAGATATAAT+GGG + Chr3:51653936-51653955 None:intergenic 20.0%
!!! AAAAGGACAGAAATATTTTA+TGG + Chr3:51657070-51657089 None:intergenic 20.0%
!!! ATTTTTCCTATTTTGCTTAA+AGG - Chr3:51654895-51654914 MsG0380014230.01.T01:intron 20.0%
!!! CAAATAATTGAGTTTTATGA+TGG + Chr3:51657891-51657910 None:intergenic 20.0%
!!! CATTATTGAATTTTGAATAG+AGG - Chr3:51654295-51654314 MsG0380014230.01.T01:intron 20.0%
!!! TAAGATAATGGAATAATTGA+AGG + Chr3:51655579-51655598 None:intergenic 20.0%
!!! TAAGTACAAATGTTTGTTAA+TGG + Chr3:51653571-51653590 None:intergenic 20.0%
!!! TTCACTATTTTTAGTTAGTT+AGG - Chr3:51654596-51654615 MsG0380014230.01.T01:CDS 20.0%
!!! TTTTAACCTTTAAGCAAAAT+AGG + Chr3:51654904-51654923 None:intergenic 20.0%
! AAACTCTAAACATGTATTCA+AGG + Chr3:51653521-51653540 None:intergenic 25.0%
! AATTGTGATATATACAAGCT+TGG + Chr3:51656270-51656289 None:intergenic 25.0%
! AGAAATTATGTCATTATTGC+TGG + Chr3:51655450-51655469 None:intergenic 25.0%
! ATATCATAGATGAAAGTGAA+TGG + Chr3:51656872-51656891 None:intergenic 25.0%
! ATCATAACATCTAGCAATTA+TGG - Chr3:51655965-51655984 MsG0380014230.01.T01:intron 25.0%
! ATTGCAAATGTGATTCTTTA+AGG - Chr3:51653439-51653458 MsG0380014230.01.T01:intron 25.0%
! ATTTAATGATTTCACAGACA+AGG - Chr3:51653876-51653895 MsG0380014230.01.T01:CDS 25.0%
! ATTTGTATCCATTATTGATC+AGG - Chr3:51658073-51658092 MsG0380014230.01.T01:CDS 25.0%
! CTGCTATTGTAACAATATTT+GGG + Chr3:51657345-51657364 None:intergenic 25.0%
! GATTCAAGAAGCTAAAATAA+AGG - Chr3:51657688-51657707 MsG0380014230.01.T01:intron 25.0%
! GGATATGTATCTAGATTAAA+CGG - Chr3:51654840-51654859 MsG0380014230.01.T01:intron 25.0%
! GTCAGTTATTTATGAATTGT+TGG + Chr3:51657959-51657978 None:intergenic 25.0%
! GTTATACACAGAAGATATAA+TGG + Chr3:51653937-51653956 None:intergenic 25.0%
! GTTATGTATTCAGAATTAGA+TGG - Chr3:51653714-51653733 MsG0380014230.01.T01:intron 25.0%
! TAACAAACATTTGTACTTAC+TGG - Chr3:51653572-51653591 MsG0380014230.01.T01:intron 25.0%
! TACAAATATTATGCACAGTA+AGG + Chr3:51658060-51658079 None:intergenic 25.0%
! TACAAATTCTACTTTCATTC+AGG - Chr3:51657245-51657264 MsG0380014230.01.T01:intron 25.0%
! TACATAACATTCAGATAACA+CGG + Chr3:51653702-51653721 None:intergenic 25.0%
! TATCATTTCTATGTTCATTG+TGG + Chr3:51656038-51656057 None:intergenic 25.0%
! TCTATGATATATACTCACAA+CGG - Chr3:51656882-51656901 MsG0380014230.01.T01:intron 25.0%
! TCTGCTATTGTAACAATATT+TGG + Chr3:51657346-51657365 None:intergenic 25.0%
! TTCCTCTATACAAACTAAAT+GGG + Chr3:51657575-51657594 None:intergenic 25.0%
! TTCTGATCAATAAAATGAAC+TGG + Chr3:51656708-51656727 None:intergenic 25.0%
! TTCTTCAAACAATGGATAAA+TGG + Chr3:51655086-51655105 None:intergenic 25.0%
! TTTACTTTAACACTCCAAAT+GGG - Chr3:51653180-51653199 MsG0380014230.01.T01:intron 25.0%
!! AATAAATGCTTGTCTTTTCA+TGG + Chr3:51657666-51657685 None:intergenic 25.0%
!! ATGCAAATAATTTGTGTGAA+AGG - Chr3:51654387-51654406 MsG0380014230.01.T01:intron 25.0%
!! ATGGAATTGGAATTGTTATT+TGG - Chr3:51654973-51654992 MsG0380014230.01.T01:intron 25.0%
!! CTGTCCTTTTAAATTCTTTA+TGG - Chr3:51657080-51657099 MsG0380014230.01.T01:intron 25.0%
!! GAATTTTGAATAGAGGAATA+TGG - Chr3:51654302-51654321 MsG0380014230.01.T01:intron 25.0%
!! TACAACACTTTCTTTTTCTA+AGG + Chr3:51656438-51656457 None:intergenic 25.0%
!!! AAATGAAGATATTTTTGGCT+CGG + Chr3:51653860-51653879 None:intergenic 25.0%
!!! ATCTAATGACTGTTTTTTTC+TGG - Chr3:51655774-51655793 MsG0380014230.01.T01:intron 25.0%
!!! TCAGTCATTATTTTTTTGGA+AGG - Chr3:51657785-51657804 MsG0380014230.01.T01:intron 25.0%
AAAAAGCAGAATGTTGTCAA+AGG + Chr3:51654535-51654554 None:intergenic 30.0%
AAACTTACCCTTAGTTGATT+TGG - Chr3:51657529-51657548 MsG0380014230.01.T01:intron 30.0%
AACAAACAAGGTTTATCATG+TGG + Chr3:51655861-51655880 None:intergenic 30.0%
AAGAACATGTAGAATCTCAT+TGG + Chr3:51657320-51657339 None:intergenic 30.0%
AAGTGAATTCTTGAAAGTCT+TGG - Chr3:51655030-51655049 MsG0380014230.01.T01:intron 30.0%
AGATGCTTACAAATGGAAAA+TGG - Chr3:51653776-51653795 MsG0380014230.01.T01:intron 30.0%
ATAATATAAATTCAAGGGGG+TGG + Chr3:51653959-51653978 None:intergenic 30.0%
ATACAAACTAAATGGGTCAA+TGG + Chr3:51657568-51657587 None:intergenic 30.0%
ATACAACTTGTAAACTTGTG+TGG - Chr3:51655273-51655292 MsG0380014230.01.T01:intron 30.0%
ATACAATGCAATTCAGTTGA+GGG - Chr3:51654018-51654037 MsG0380014230.01.T01:intron 30.0%
ATATAAGAAGCAATGAAGCT+TGG + Chr3:51656951-51656970 None:intergenic 30.0%
ATATGTTGCCTGATCAATAA+TGG + Chr3:51658084-51658103 None:intergenic 30.0%
ATGCTTTATCTTGTAAGTCA+TGG - Chr3:51654415-51654434 MsG0380014230.01.T01:intron 30.0%
CGACATATTTAATGTGAAAG+TGG - Chr3:51653028-51653047 MsG0380014230.01.T01:CDS 30.0%
CGATGATGCAATATTATGAA+TGG - Chr3:51655897-51655916 MsG0380014230.01.T01:intron 30.0%
CTGTTGAAAAAGTCAAATCA+CGG + Chr3:51656520-51656539 None:intergenic 30.0%
GGAAACAAATACGAATCTAA+AGG + Chr3:51653304-51653323 None:intergenic 30.0%
GGCACTATTATATCTTATCA+TGG - Chr3:51657294-51657313 MsG0380014230.01.T01:intron 30.0%
GTAAAGTTAGGAAAATCTAG+TGG - Chr3:51654201-51654220 MsG0380014230.01.T01:intron 30.0%
GTCATTATTGCTGGAAAAAA+TGG + Chr3:51655441-51655460 None:intergenic 30.0%
GTGTTTATATCTCCAATCTT+TGG - Chr3:51655409-51655428 MsG0380014230.01.T01:intron 30.0%
GTTCCTCTATACAAACTAAA+TGG + Chr3:51657576-51657595 None:intergenic 30.0%
GTTTACTTTAACACTCCAAA+TGG - Chr3:51653179-51653198 MsG0380014230.01.T01:intron 30.0%
TACAAACTAAATGGGTCAAT+GGG + Chr3:51657567-51657586 None:intergenic 30.0%
TACAACTTGTAAACTTGTGT+GGG - Chr3:51655274-51655293 MsG0380014230.01.T01:intron 30.0%
TAGATACATATCCAATTACG+TGG + Chr3:51654833-51654852 None:intergenic 30.0%
TATCATGTATTTGTGTTCTC+AGG + Chr3:51656132-51656151 None:intergenic 30.0%
TATGATAGAATCAATGGTTG+TGG - Chr3:51657843-51657862 MsG0380014230.01.T01:intron 30.0%
TCAGAAACCAAATCAACTAA+GGG + Chr3:51657539-51657558 None:intergenic 30.0%
TCATTGATCATTCAACTTAC+TGG - Chr3:51656077-51656096 MsG0380014230.01.T01:intron 30.0%
TCTGTGTTGGATTTCAAAAA+AGG - Chr3:51657623-51657642 MsG0380014230.01.T01:intron 30.0%
TGCTCAAAATTCTATCTGAT+TGG - Chr3:51654623-51654642 MsG0380014230.01.T01:CDS 30.0%
TGTATTCAGAATTAGATGGA+AGG - Chr3:51653718-51653737 MsG0380014230.01.T01:intron 30.0%
TTAAGAAGAACCTATAAGGA+AGG + Chr3:51654466-51654485 None:intergenic 30.0%
TTACCTCTTTATATAGTGGT+GGG + Chr3:51655116-51655135 None:intergenic 30.0%
TTCAGAAACCAAATCAACTA+AGG + Chr3:51657540-51657559 None:intergenic 30.0%
TTGCTCAATTCTCTTTAACT+TGG + Chr3:51655145-51655164 None:intergenic 30.0%
TTTATATCTCCAATCTTTGG+TGG - Chr3:51655412-51655431 MsG0380014230.01.T01:intron 30.0%
TTTCTATTGCCTCATTATCT+GGG - Chr3:51656761-51656780 MsG0380014230.01.T01:intron 30.0%
! AAACTCACAAATGGCATTTT+TGG + Chr3:51657442-51657461 None:intergenic 30.0%
! CTATTTGTCAAGTTTGAGTT+TGG - Chr3:51656162-51656181 MsG0380014230.01.T01:intron 30.0%
! CTCTATCTTCATTTTCATTG+GGG - Chr3:51655471-51655490 MsG0380014230.01.T01:CDS 30.0%
! GCAAGTGTTACTAAATAAAG+AGG + Chr3:51655820-51655839 None:intergenic 30.0%
! GCTCTATCTTCATTTTCATT+GGG - Chr3:51655470-51655489 MsG0380014230.01.T01:CDS 30.0%
! TAAGGGTAAGTTTAGTTTCA+TGG + Chr3:51657522-51657541 None:intergenic 30.0%
! TATCCAGCTTCTTTTATGTA+GGG + Chr3:51654001-51654020 None:intergenic 30.0%
! TCTATCTTCATTTTCATTGG+GGG - Chr3:51655472-51655491 MsG0380014230.01.T01:CDS 30.0%
! TGCTCTATCTTCATTTTCAT+TGG - Chr3:51655469-51655488 MsG0380014230.01.T01:CDS 30.0%
! TTTTCTATTGCCTCATTATC+TGG - Chr3:51656760-51656779 MsG0380014230.01.T01:intron 30.0%
!! ATCACTTCTAGAGTTTACTT+TGG + Chr3:51657497-51657516 None:intergenic 30.0%
!! CACAAGGATTATTTTACTGT+TGG - Chr3:51654051-51654070 MsG0380014230.01.T01:intron 30.0%
!! TAGGTGTTTTAAACGTCTTT+TGG - Chr3:51656410-51656429 MsG0380014230.01.T01:intron 30.0%
!! TTTTATGATGGTGCAGATTT+TGG + Chr3:51657879-51657898 None:intergenic 30.0%
!!! AGACAAGGTTCTGTTTTTTT+TGG - Chr3:51653891-51653910 MsG0380014230.01.T01:CDS 30.0%
!!! TCTTTTTTGCTGTTTGTTTG+TGG - Chr3:51655374-51655393 MsG0380014230.01.T01:intron 30.0%
!!! TGACTTTTTCAACAGGAAAA+CGG - Chr3:51656525-51656544 MsG0380014230.01.T01:CDS 30.0%
AAATTCTATCTGATTGGTGC+AGG - Chr3:51654629-51654648 MsG0380014230.01.T01:CDS 35.0%
AAGGATAATGTCCACGTAAT+TGG - Chr3:51654819-51654838 MsG0380014230.01.T01:intron 35.0%
AATGAACTGGTAGACCAATT+AGG + Chr3:51656695-51656714 None:intergenic 35.0%
ACATGGTTCAAACTCACAAA+TGG + Chr3:51657451-51657470 None:intergenic 35.0%
ACTAGGATTGCTTGTATTCA+TGG - Chr3:51655693-51655712 MsG0380014230.01.T01:intron 35.0%
AGATTAAACGGAGCTAAGAA+AGG - Chr3:51654852-51654871 MsG0380014230.01.T01:intron 35.0%
ATAAAGAGGTTTCAGCATCA+TGG + Chr3:51655806-51655825 None:intergenic 35.0%
ATCGCCATATTTGAACATTC+TGG + Chr3:51656572-51656591 None:intergenic 35.0%
ATTCCTTGTAACTCTCTAGT+GGG - Chr3:51655208-51655227 MsG0380014230.01.T01:intron 35.0%
CACCACTATATAAAGAGGTA+AGG - Chr3:51655115-51655134 MsG0380014230.01.T01:intron 35.0%
CATCATCAATCACAGCATAA+GGG + Chr3:51652998-51653017 None:intergenic 35.0%
CATGCAGTGAAAAACAAACA+AGG + Chr3:51655873-51655892 None:intergenic 35.0%
CCAATTAGGTAGAAACACAA+TGG + Chr3:51656681-51656700 None:intergenic 35.0%
CTTACCTCTTTATATAGTGG+TGG + Chr3:51655117-51655136 None:intergenic 35.0%
GACTACTAGTGGCATAAAAA+TGG + Chr3:51654658-51654677 None:intergenic 35.0%
GATACAATGCAATTCAGTTG+AGG - Chr3:51654017-51654036 MsG0380014230.01.T01:intron 35.0%
GATGCTATCACAATAGCATT+AGG + Chr3:51657048-51657067 None:intergenic 35.0%
GGAACCAGAATGTTCAAATA+TGG - Chr3:51656565-51656584 MsG0380014230.01.T01:intron 35.0%
GGAATGTTAAGCTTCTGTAT+AGG - Chr3:51654253-51654272 MsG0380014230.01.T01:intron 35.0%
GTTGGATTATCGATGTTTGA+TGG - Chr3:51655751-51655770 MsG0380014230.01.T01:intron 35.0%
TACCTCTTTATATAGTGGTG+GGG + Chr3:51655115-51655134 None:intergenic 35.0%
TAGAATAAAGGCTAAGTTCG+AGG + Chr3:51656474-51656493 None:intergenic 35.0%
TAGATGAAAGTGAATGGAAC+TGG + Chr3:51656866-51656885 None:intergenic 35.0%
TATCGATGTTGATGTGTTAG+TGG - Chr3:51655605-51655624 MsG0380014230.01.T01:intron 35.0%
TCACTTCATGATGTTTGAAC+AGG - Chr3:51656811-51656830 MsG0380014230.01.T01:intron 35.0%
TCATATATCCGCAATGACTT+TGG + Chr3:51653815-51653834 None:intergenic 35.0%
TCCATTTGTAAGCATCTTCA+GGG + Chr3:51653773-51653792 None:intergenic 35.0%
TCCTTCTATCAAACTTGAAC+TGG - Chr3:51656608-51656627 MsG0380014230.01.T01:intron 35.0%
TGAAAAAGTCAAATCACGGT+TGG + Chr3:51656516-51656535 None:intergenic 35.0%
TGAAACCTCCTATAGCATAT+TGG - Chr3:51653081-51653100 MsG0380014230.01.T01:CDS 35.0%
TGAAGCTCATATGGAATTAG+TGG - Chr3:51653832-51653851 MsG0380014230.01.T01:intron 35.0%
TGCCTTACCTCTTTATATAG+TGG + Chr3:51655120-51655139 None:intergenic 35.0%
TTAGGATTCATGCAATGACT+CGG + Chr3:51657030-51657049 None:intergenic 35.0%
TTCATGATGTTTGAACAGGT+GGG - Chr3:51656815-51656834 MsG0380014230.01.T01:intron 35.0%
TTCCATTTGTAAGCATCTTC+AGG + Chr3:51653774-51653793 None:intergenic 35.0%
TTGAAGGTAACAACATGTGT+CGG + Chr3:51655563-51655582 None:intergenic 35.0%
TTGTAATACATTGACCACCA+TGG - Chr3:51657988-51658007 MsG0380014230.01.T01:CDS 35.0%
! ACCAGTTCAAGTTTGATAGA+AGG + Chr3:51656612-51656631 None:intergenic 35.0%
! CCATTGTGTTTCTACCTAAT+TGG - Chr3:51656678-51656697 MsG0380014230.01.T01:intron 35.0%
! CTGTGTCATCCTCAATTTTA+AGG - Chr3:51657107-51657126 MsG0380014230.01.T01:intron 35.0%
! GAAATTTCATTGAGCATTGC+TGG - Chr3:51653601-51653620 MsG0380014230.01.T01:intron 35.0%
! GATAGCATGCACTATTGTTT+TGG - Chr3:51657716-51657735 MsG0380014230.01.T01:intron 35.0%
! GTATCCAGCTTCTTTTATGT+AGG + Chr3:51654002-51654021 None:intergenic 35.0%
! TGGGATAGTAAACCTTTTCT+TGG - Chr3:51655293-51655312 MsG0380014230.01.T01:intron 35.0%
! TGGTTGAAAAAGTATATGCC+CGG - Chr3:51653131-51653150 MsG0380014230.01.T01:intron 35.0%
!! ATGTGCATGTAAAAGCATCA+CGG - Chr3:51657467-51657486 MsG0380014230.01.T01:CDS 35.0%
!! GACCCATTTAGTTTGTATAG+AGG - Chr3:51657570-51657589 MsG0380014230.01.T01:intron 35.0%
!! GTTGAGGAGTATCAAATTGA+TGG - Chr3:51656837-51656856 MsG0380014230.01.T01:intron 35.0%
!!! ACTTTTTCAACAGGAAAACG+GGG - Chr3:51656527-51656546 MsG0380014230.01.T01:CDS 35.0%
!!! ATAGTTGCTGACTCTTCTTT+TGG - Chr3:51655661-51655680 MsG0380014230.01.T01:intron 35.0%
!!! CGTGATTTGACTTTTTCAAC+AGG - Chr3:51656518-51656537 MsG0380014230.01.T01:CDS 35.0%
!!! CTTTTCATGGTTAGCTTACT+TGG + Chr3:51657653-51657672 None:intergenic 35.0%
!!! GACTTTTTCAACAGGAAAAC+GGG - Chr3:51656526-51656545 MsG0380014230.01.T01:CDS 35.0%
AACCAGGTAAACCTTACACT+AGG - Chr3:51653240-51653259 MsG0380014230.01.T01:intron 40.0%
ACACCATCAATGTGAAGTGT+TGG + Chr3:51655527-51655546 None:intergenic 40.0%
ACATGAGTTCATCGAAGTCA+AGG - Chr3:51654800-51654819 MsG0380014230.01.T01:intron 40.0%
ACCAGGTAAACCTTACACTA+GGG - Chr3:51653241-51653260 MsG0380014230.01.T01:intron 40.0%
ACCTATACACGTAATCACAC+TGG + Chr3:51656395-51656414 None:intergenic 40.0%
ACGACAACAGCATACTACAT+AGG + Chr3:51653325-51653344 None:intergenic 40.0%
ACTAATCGCTTGAAGTCATC+AGG + Chr3:51654692-51654711 None:intergenic 40.0%
AGAAAAGTTGACCACATCTC+GGG + Chr3:51658176-51658195 None:intergenic 40.0%
AGAAACACAATGGCTCAAAG+AGG + Chr3:51656671-51656690 None:intergenic 40.0%
AGACTGTTCCTGATCATGAA+TGG - Chr3:51658198-51658217 MsG0380014230.01.T01:CDS 40.0%
AGCAATCCAAGTTGCTATGA+TGG - Chr3:51654954-51654973 MsG0380014230.01.T01:intron 40.0%
AGTAACTGTTCACTACTCCA+TGG + Chr3:51658008-51658027 None:intergenic 40.0%
ATAAAGGCTAAGTTCGAGGT+AGG + Chr3:51656470-51656489 None:intergenic 40.0%
ATCAATCACAGCATAAGGGA+AGG + Chr3:51652994-51653013 None:intergenic 40.0%
ATGTAGGTGATACAAAGCGT+GGG - Chr3:51655233-51655252 MsG0380014230.01.T01:intron 40.0%
ATGTGAAAGTGGATCCAGAA+TGG - Chr3:51653039-51653058 MsG0380014230.01.T01:CDS 40.0%
CAACCAATATGTTGACAAGG+AGG - Chr3:51657273-51657292 MsG0380014230.01.T01:intron 40.0%
CAGCAACCAATATGTTGACA+AGG - Chr3:51657270-51657289 MsG0380014230.01.T01:intron 40.0%
CATGCACAAATGCATAAGCA+GGG + Chr3:51653361-51653380 None:intergenic 40.0%
CATTCCTTGTAACTCTCTAG+TGG - Chr3:51655207-51655226 MsG0380014230.01.T01:intron 40.0%
CATTTGTAAGCATCTTCAGG+GGG + Chr3:51653771-51653790 None:intergenic 40.0%
CCAATTCCATCATAGCAACT+TGG + Chr3:51654963-51654982 None:intergenic 40.0%
CCATCATCAATCACAGCATA+AGG + Chr3:51652999-51653018 None:intergenic 40.0%
CCATTTGTAAGCATCTTCAG+GGG + Chr3:51653772-51653791 None:intergenic 40.0%
CCTTATGCTGTGATTGATGA+TGG - Chr3:51652996-51653015 MsG0380014230.01.T01:CDS 40.0%
CGAATTCTTTCTTGCCATTC+TGG + Chr3:51653056-51653075 None:intergenic 40.0%
CGCAATGACTTTGGTACTTT+GGG + Chr3:51653806-51653825 None:intergenic 40.0%
CTTCATGATGTTTGAACAGG+TGG - Chr3:51656814-51656833 MsG0380014230.01.T01:intron 40.0%
CTTCCCTACATAAAAGAAGC+TGG - Chr3:51653995-51654014 MsG0380014230.01.T01:intron 40.0%
GAGAAAAGTTGACCACATCT+CGG + Chr3:51658177-51658196 None:intergenic 40.0%
GAGAAGCTTGCATTCATCTT+CGG - Chr3:51655001-51655020 MsG0380014230.01.T01:intron 40.0%
GATCAGGCAACATATTATCC+TGG - Chr3:51658089-51658108 MsG0380014230.01.T01:CDS 40.0%
GCGGATATATGAAGCTCATA+TGG - Chr3:51653823-51653842 MsG0380014230.01.T01:intron 40.0%
GGTCTTAGTATGATCCATGA+GGG - Chr3:51654222-51654241 MsG0380014230.01.T01:intron 40.0%
GGTGTGACTTCTTCAAACAA+TGG + Chr3:51655094-51655113 None:intergenic 40.0%
GTCTCAAGCCAATATGCTAT+AGG + Chr3:51653092-51653111 None:intergenic 40.0%
TAACACTCCAAATGGGTCAT+TGG - Chr3:51653187-51653206 MsG0380014230.01.T01:intron 40.0%
TATGCCACTAGTAGTCGATA+TGG - Chr3:51654662-51654681 MsG0380014230.01.T01:CDS 40.0%
TATTGCCTCATTATCTGGGA+GGG - Chr3:51656765-51656784 MsG0380014230.01.T01:intron 40.0%
TCAAGCCAATATGCTATAGG+AGG + Chr3:51653089-51653108 None:intergenic 40.0%
TCAATTATTTGCAGCCTACG+TGG - Chr3:51657900-51657919 MsG0380014230.01.T01:intron 40.0%
TCATGAATGGAGCATGACTA+AGG - Chr3:51658211-51658230 MsG0380014230.01.T01:CDS 40.0%
TTATGTGAGCCAACTTCTCA+AGG - Chr3:51658113-51658132 MsG0380014230.01.T01:CDS 40.0%
TTTCGAGAATCCCTAGTGTA+AGG + Chr3:51653254-51653273 None:intergenic 40.0%
! ACGGTTTTTGCTTCGTTTAC+TGG - Chr3:51656901-51656920 MsG0380014230.01.T01:intron 40.0%
! CCAAAGTACCAAAGTCATTG+CGG - Chr3:51653804-51653823 MsG0380014230.01.T01:intron 40.0%
! CCAAGTTGCTATGATGGAAT+TGG - Chr3:51654960-51654979 MsG0380014230.01.T01:intron 40.0%
! CTTCAAGCGATTAGTTGATG+AGG - Chr3:51654697-51654716 MsG0380014230.01.T01:intron 40.0%
! GTGATGCTTTTACATGCACA+TGG + Chr3:51657468-51657487 None:intergenic 40.0%
! TGATCCATGAGGGTATGAAT+CGG - Chr3:51654232-51654251 MsG0380014230.01.T01:intron 40.0%
! TGGTCTTAGTATGATCCATG+AGG - Chr3:51654221-51654240 MsG0380014230.01.T01:intron 40.0%
!! ATCTGAAGTGCTTTGGAGTT+TGG - Chr3:51657925-51657944 MsG0380014230.01.T01:intron 40.0%
!! TATTGGCTTGAGACACGTAA+AGG - Chr3:51653098-51653117 MsG0380014230.01.T01:CDS 40.0%
!!! AGCATGCACTATTGTTTTGG+CGG - Chr3:51657719-51657738 MsG0380014230.01.T01:intron 40.0%
!!! CTTTTTCAACAGGAAAACGG+GGG - Chr3:51656528-51656547 MsG0380014230.01.T01:CDS 40.0%
AAATGGCAGCCACCAAAGAT+TGG + Chr3:51655424-51655443 None:intergenic 45.0%
AACCCAGCCTTCTCATAACA+AGG + Chr3:51657602-51657621 None:intergenic 45.0%
AACTCTCTAGTGGGACATGT+AGG - Chr3:51655217-51655236 MsG0380014230.01.T01:intron 45.0%
AACTGTTCACTACTCCATGG+TGG + Chr3:51658005-51658024 None:intergenic 45.0%
AGCTAATGTTCACAGCAGTC+TGG + Chr3:51653489-51653508 None:intergenic 45.0%
AGCTTGCATTCATCTTCGGA+TGG - Chr3:51655005-51655024 MsG0380014230.01.T01:intron 45.0%
CAATTCAGTTGAGGGAGTTG+TGG - Chr3:51654026-51654045 MsG0380014230.01.T01:intron 45.0%
CACCCCACCACTATATAAAG+AGG - Chr3:51655110-51655129 MsG0380014230.01.T01:intron 45.0%
CAGCCTTCTCATAACAAGGT+GGG + Chr3:51657598-51657617 None:intergenic 45.0%
CATGTAGGTGATACAAAGCG+TGG - Chr3:51655232-51655251 MsG0380014230.01.T01:intron 45.0%
CATGTCTGTAGCCAAACCAT+TGG + Chr3:51657820-51657839 None:intergenic 45.0%
CATTCCGATTCATACCCTCA+TGG + Chr3:51654239-51654258 None:intergenic 45.0%
CCATGCACAAATGCATAAGC+AGG + Chr3:51653362-51653381 None:intergenic 45.0%
CCCCTGAAGATGCTTACAAA+TGG - Chr3:51653769-51653788 MsG0380014230.01.T01:intron 45.0%
CCGCAATGACTTTGGTACTT+TGG + Chr3:51653807-51653826 None:intergenic 45.0%
CCTGCTTATGCATTTGTGCA+TGG - Chr3:51653359-51653378 MsG0380014230.01.T01:intron 45.0%
CTATTGCCTCATTATCTGGG+AGG - Chr3:51656764-51656783 MsG0380014230.01.T01:intron 45.0%
GCACCAACACTTCACATTGA+TGG - Chr3:51655521-51655540 MsG0380014230.01.T01:intron 45.0%
GCCAGTGTGATTACGTGTAT+AGG - Chr3:51656391-51656410 MsG0380014230.01.T01:intron 45.0%
GGAAACTAGAGCCAATGGTT+TGG - Chr3:51657806-51657825 MsG0380014230.01.T01:intron 45.0%
GTCATGCTCCATTCATGATC+AGG + Chr3:51658209-51658228 None:intergenic 45.0%
GTGCCTCCTTGTCAACATAT+TGG + Chr3:51657279-51657298 None:intergenic 45.0%
TAAGCACGCACCTTCCTTAT+AGG - Chr3:51654453-51654472 MsG0380014230.01.T01:intron 45.0%
TATTTGTGTTCTCAGGTGCG+CGG + Chr3:51656125-51656144 None:intergenic 45.0%
TCCCTAGTGTAAGGTTTACC+TGG + Chr3:51653245-51653264 None:intergenic 45.0%
TCCTCATGGAAGCAAGTACA+GGG - Chr3:51653157-51653176 MsG0380014230.01.T01:intron 45.0%
TGCTGGAGAGTCTATTAGCA+TGG - Chr3:51653618-51653637 MsG0380014230.01.T01:intron 45.0%
TGCTTCGTTTACTGGTGACT+TGG - Chr3:51656909-51656928 MsG0380014230.01.T01:intron 45.0%
TGGAAGGAAACTAGAGCCAA+TGG - Chr3:51657801-51657820 MsG0380014230.01.T01:intron 45.0%
TGTCCCACTAGAGAGTTACA+AGG + Chr3:51655214-51655233 None:intergenic 45.0%
TTCCTCATGGAAGCAAGTAC+AGG - Chr3:51653156-51653175 MsG0380014230.01.T01:intron 45.0%
! AGGAAGGCACGAGTAAAGTT+AGG - Chr3:51654189-51654208 MsG0380014230.01.T01:intron 45.0%
! AGTGCCATATCGACTACTAG+TGG + Chr3:51654669-51654688 None:intergenic 45.0%
! CACCTTGTTATGAGAAGGCT+GGG - Chr3:51657597-51657616 MsG0380014230.01.T01:intron 45.0%
! CATTGATGACCGCTGTATCT+AGG - Chr3:51654169-51654188 MsG0380014230.01.T01:intron 45.0%
! GAACCCACCTTGTTATGAGA+AGG - Chr3:51657592-51657611 MsG0380014230.01.T01:intron 45.0%
! GAAGTTGGCTCACATAATCC+AGG + Chr3:51658110-51658129 None:intergenic 45.0%
! GTTAGTGGTAGTGTTGTGTC+TGG - Chr3:51655620-51655639 MsG0380014230.01.T01:intron 45.0%
! TTCGTTTACTGGTGACTTGG+AGG - Chr3:51656912-51656931 MsG0380014230.01.T01:intron 45.0%
!! ATGTTTGAACAGGTGGGTTG+AGG - Chr3:51656821-51656840 MsG0380014230.01.T01:intron 45.0%
!! CACTTCACATTGATGGTGTC+CGG - Chr3:51655528-51655547 MsG0380014230.01.T01:intron 45.0%
!! CGATTAGTTGATGAGGCACA+TGG - Chr3:51654704-51654723 MsG0380014230.01.T01:intron 45.0%
!! GACTCTTCTTTTGGTTGCAC+AGG - Chr3:51655670-51655689 MsG0380014230.01.T01:intron 45.0%
!! GTGCTTTGGAGTTTGGAGTA+AGG - Chr3:51657932-51657951 MsG0380014230.01.T01:intron 45.0%
!! TCTTTTGGTTGCACAGGACT+AGG - Chr3:51655676-51655695 MsG0380014230.01.T01:intron 45.0%
!! ATAAAAAAAACATAATATTA+TGG + Chr3:51653658-51653677 None:intergenic 5.0%
!! TTATATATTATCAATTTAAT+AGG + Chr3:51654344-51654363 None:intergenic 5.0%
ACACTCCCTCCCAGATAATG+AGG + Chr3:51656773-51656792 None:intergenic 50.0%
ACCCTGTACTTGCTTCCATG+AGG + Chr3:51653161-51653180 None:intergenic 50.0%
AGCACTTCAGATTGCCACGT+AGG + Chr3:51657917-51657936 None:intergenic 50.0%
CATCTGCAGCAGCATACGAA+TGG + Chr3:51655726-51655745 None:intergenic 50.0%
CCAAGTCCACCTTGAGAAGT+TGG + Chr3:51658125-51658144 None:intergenic 50.0%
CCAGCCTTCTCATAACAAGG+TGG + Chr3:51657599-51657618 None:intergenic 50.0%
CTCCAAATGGGTCATTGGAG+CGG - Chr3:51653192-51653211 MsG0380014230.01.T01:intron 50.0%
CTTGCTTCCATGAGGAATGC+CGG + Chr3:51653153-51653172 None:intergenic 50.0%
GATGACCGCTGTATCTAGGA+AGG - Chr3:51654173-51654192 MsG0380014230.01.T01:intron 50.0%
GCAAGCTTATGCGATCCACT+GGG - Chr3:51653740-51653759 MsG0380014230.01.T01:intron 50.0%
GTATGCTGCTGCAGATGAGA+TGG - Chr3:51655729-51655748 MsG0380014230.01.T01:intron 50.0%
TATATGCCCGGCATTCCTCA+TGG - Chr3:51653143-51653162 MsG0380014230.01.T01:intron 50.0%
TCCAAATGGGTCATTGGAGC+GGG - Chr3:51653193-51653212 MsG0380014230.01.T01:intron 50.0%
TCGTGCCTTCCTAGATACAG+CGG + Chr3:51654181-51654200 None:intergenic 50.0%
TGAGACACGTAAAGGCAGGA+AGG - Chr3:51653106-51653125 MsG0380014230.01.T01:CDS 50.0%
TGAGGGAGTTGTGGAACACA+AGG - Chr3:51654035-51654054 MsG0380014230.01.T01:intron 50.0%
TGCACATATGTAGCCCAAGC+AGG + Chr3:51653221-51653240 None:intergenic 50.0%
TGGGCTACATATGTGCAACC+AGG - Chr3:51653224-51653243 MsG0380014230.01.T01:intron 50.0%
TGTGAGCCAACTTCTCAAGG+TGG - Chr3:51658116-51658135 MsG0380014230.01.T01:CDS 50.0%
TTGCTTCCATGAGGAATGCC+GGG + Chr3:51653152-51653171 None:intergenic 50.0%
TTGTAAGCATCTTCAGGGGG+TGG + Chr3:51653768-51653787 None:intergenic 50.0%
! CCAACTTCTCAAGGTGGACT+TGG - Chr3:51658122-51658141 MsG0380014230.01.T01:CDS 50.0%
! CCACCTTGTTATGAGAAGGC+TGG - Chr3:51657596-51657615 MsG0380014230.01.T01:intron 50.0%
! CGTGGCAATCTGAAGTGCTT+TGG - Chr3:51657918-51657937 MsG0380014230.01.T01:intron 50.0%
AACGGGGGCAACACAAGTTC+TGG - Chr3:51656543-51656562 MsG0380014230.01.T01:CDS 55.0%
ACCCGCTCCAATGACCCATT+TGG + Chr3:51653197-51653216 None:intergenic 55.0%
ACGGGGGCAACACAAGTTCT+GGG - Chr3:51656544-51656563 MsG0380014230.01.T01:CDS 55.0%
ATTGGAGCGGGTACCTGCTT+GGG - Chr3:51653205-51653224 MsG0380014230.01.T01:intron 55.0%
CACGTAAAGGCAGGAAGGCA+TGG - Chr3:51653111-51653130 MsG0380014230.01.T01:CDS 55.0%
GAAGGCTGGGTTGTCTGTGT+TGG - Chr3:51657610-51657629 MsG0380014230.01.T01:intron 55.0%
GCTGCTGCAGATGAGATGGT+TGG - Chr3:51655733-51655752 MsG0380014230.01.T01:intron 55.0%
GGCAAGCTTATGCGATCCAC+TGG - Chr3:51653739-51653758 MsG0380014230.01.T01:intron 55.0%
GGCTTGAGACACGTAAAGGC+AGG - Chr3:51653102-51653121 MsG0380014230.01.T01:CDS 55.0%
TCAGGTGCGCGGTGTATCAA+AGG + Chr3:51656114-51656133 None:intergenic 55.0%
!! CATGTGTCGGTGTCAGACAC+CGG + Chr3:51655550-51655569 None:intergenic 55.0%
ACCACATCTCGGGCGCAGAA+AGG + Chr3:51658166-51658185 None:intergenic 60.0%
ACCTTTCTGCGCCCGAGATG+TGG - Chr3:51658162-51658181 MsG0380014230.01.T01:CDS 60.0%
CATTGGAGCGGGTACCTGCT+TGG - Chr3:51653204-51653223 MsG0380014230.01.T01:intron 60.0%
CTTCAGGGGGTGGTTCCCAG+TGG + Chr3:51653758-51653777 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 51652972 51658253 51652972 ID=MsG0380014230.01;Name=MsG0380014230.01
Chr3 mRNA 51652972 51658253 51652972 ID=MsG0380014230.01.T01;Parent=MsG0380014230.01;Name=MsG0380014230.01.T01;_AED=0.51;_eAED=0.52;_QI=0|0|0|0.88|0.75|0.77|9|0|360
Chr3 exon 51657980 51658253 51657980 ID=MsG0380014230.01.T01:exon:10078;Parent=MsG0380014230.01.T01
Chr3 exon 51657409 51657498 51657409 ID=MsG0380014230.01.T01:exon:10077;Parent=MsG0380014230.01.T01
Chr3 exon 51656982 51657074 51656982 ID=MsG0380014230.01.T01:exon:10076;Parent=MsG0380014230.01.T01
Chr3 exon 51656500 51656574 51656500 ID=MsG0380014230.01.T01:exon:10075;Parent=MsG0380014230.01.T01
Chr3 exon 51655425 51655533 51655425 ID=MsG0380014230.01.T01:exon:10074;Parent=MsG0380014230.01.T01
Chr3 exon 51654596 51654685 51654596 ID=MsG0380014230.01.T01:exon:10073;Parent=MsG0380014230.01.T01
Chr3 exon 51654303 51654392 51654303 ID=MsG0380014230.01.T01:exon:10072;Parent=MsG0380014230.01.T01
Chr3 exon 51653856 51653958 51653856 ID=MsG0380014230.01.T01:exon:10071;Parent=MsG0380014230.01.T01
Chr3 exon 51652972 51653130 51652972 ID=MsG0380014230.01.T01:exon:10070;Parent=MsG0380014230.01.T01
Chr3 CDS 51657980 51658253 51657980 ID=MsG0380014230.01.T01:cds;Parent=MsG0380014230.01.T01
Chr3 CDS 51657409 51657498 51657409 ID=MsG0380014230.01.T01:cds;Parent=MsG0380014230.01.T01
Chr3 CDS 51656982 51657074 51656982 ID=MsG0380014230.01.T01:cds;Parent=MsG0380014230.01.T01
Chr3 CDS 51656500 51656574 51656500 ID=MsG0380014230.01.T01:cds;Parent=MsG0380014230.01.T01
Chr3 CDS 51655425 51655533 51655425 ID=MsG0380014230.01.T01:cds;Parent=MsG0380014230.01.T01
Chr3 CDS 51654596 51654685 51654596 ID=MsG0380014230.01.T01:cds;Parent=MsG0380014230.01.T01
Chr3 CDS 51654303 51654392 51654303 ID=MsG0380014230.01.T01:cds;Parent=MsG0380014230.01.T01
Chr3 CDS 51653856 51653958 51653856 ID=MsG0380014230.01.T01:cds;Parent=MsG0380014230.01.T01
Chr3 CDS 51652972 51653130 51652972 ID=MsG0380014230.01.T01:cds;Parent=MsG0380014230.01.T01
Gene Sequence

>MsG0380014230.01.T01

ATGGGCAGCAAAGAATGGACCTTCCCTTATGCTGTGATTGATGATGGCAAGAATTACGACATATTTAATGTGAAAGTGGATCCAGAATGGCAAGAAAGAATTCGTGCGTTGAAACCTCCTATAGCATATTGGCTTGAGACACGTAAAGGCAGGAAGGCATGGTTGAAAAAGTATATGCCCGGCATTCCTCATGGAAGCAAGTACAGGGTTTACTTTAACACTCCAAATGGGTCATTGGAGCGGGTACCTGCTTGGGCTACATATGTGCAACCAGAATTAGATGGAAGGCAAGCTTATGCGATCCACTGGGAACCACCCCCTGAAGATGCTTACAAATGGAAAATGGAAGTCCCAAAGTACCAAAAATTTCTTAAGTCAGAGACATTGATGACCGCTGTATCTAGGAAGGCACGAGTAAAGTTAGGAAAATCTAGTGGTCTTAGTATGATCCATGAGGGTTACCATTTTTATGCCACTAGTAGTCGATATGGCACTCCTGATGACTTCAAGCGATTAGTTGATGAGGCACATGGACTAGGATTGCTTGTATTCATGGAAATTGTCCATTCGTATGCTGCTGCAGATGAGATGGTTGGATTATCGATGTTTGATGGATCTAATGACTGTTTTTTTCTGGTATTGAAAACGGGGGCAACACAAGTTCTGGGAACCAGAATGTTCAAATATGGCGATCTTGATGTTCTACATTTCCTTCTATCAAACTTGAACTGGTGGGTTGAGGAGTATCAAATTGATGGTTTCCAGTTCCATTCACTTTCATCTATGATATATACTCACAACGGTTTTTGCTTCGTTTACTGGTACAGCAACCAATATGTTGACAAGGAGGCACTATTATATCTTATCATGGCCAATGAGATTCTACATGTTCTTTACCCAAATATTGTTACAATAGCAGAAGATGCAACATATTATCCTGGATTATGTGAGCCAACTTCTCAAGGTGGACTTGGATTTGATTACTATGTCAACCTTTCTGCGCCCGAGATGTGGTCAACTTTTCTCGAGACTGTTCCTGATCATGAATGGAGCATGACTAAGGTCATACTTGAATATAATTGA
Protein sequence

>MsG0380014230.01.T01

MGSKEWTFPYAVIDDGKNYDIFNVKVDPEWQERIRALKPPIAYWLETRKGRKAWLKKYMPGIPHGSKYRVYFNTPNGSLERVPAWATYVQPELDGRQAYAIHWEPPPEDAYKWKMEVPKYQKFLKSETLMTAVSRKARVKLGKSSGLSMIHEGYHFYATSSRYGTPDDFKRLVDEAHGLGLLVFMEIVHSYAAADEMVGLSMFDGSNDCFFLVLKTGATQVLGTRMFKYGDLDVLHFLLSNLNWWVEEYQIDGFQFHSLSSMIYTHNGFCFVYWYSNQYVDKEALLYLIMANEILHVLYPNIVTIAEDATYYPGLCEPTSQGGLGFDYYVNLSAPEMWSTFLETVPDHEWSMTKVILEYN*