AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007763.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007763.01.T01 MTR_2g031620 92.226 283 6 1 139 405 249 531 0.0 541
MsG0280007763.01.T01 MTR_2g031740 60.839 143 40 1 145 271 193 335 5.47e-53 180
MsG0280007763.01.T01 MTR_5g099220 57.047 149 48 1 139 271 107 255 2.55e-50 170
MsG0280007763.01.T01 MTR_5g099220 57.047 149 48 1 139 271 179 327 1.46e-49 171
MsG0280007763.01.T01 MTR_5g099220 57.364 129 39 1 139 251 107 235 1.59e-42 150
MsG0280007763.01.T01 MTR_5g099220 56.923 130 40 1 139 252 184 313 7.49e-42 150
MsG0280007763.01.T01 MTR_5g099220 55.963 109 32 1 139 231 184 292 7.75e-32 123
MsG0280007763.01.T01 MTR_2g013980 65.625 96 28 3 17 110 1007 1099 4.26e-24 105
MsG0280007763.01.T01 MTR_4g132870 73.684 57 14 1 49 105 218 273 1.75e-20 90.9
MsG0280007763.01.T01 MTR_1g090240 69.697 66 18 2 41 105 33 97 3.36e-19 90.1
MsG0280007763.01.T01 MTR_8g091830 67.925 53 17 0 56 108 757 809 5.29e-18 86.7
MsG0280007763.01.T01 MTR_8g469750 44.954 109 34 3 22 127 101 186 2.24e-17 84.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007763.01.T01 AT1G30680 67.254 284 77 1 138 405 259 542 5.80e-135 403
MsG0280007763.01.T01 AT1G30660 63.158 152 40 1 139 274 178 329 6.85e-56 187
MsG0280007763.01.T01 AT1G30660 63.158 152 40 1 139 274 175 326 7.57e-56 187
MsG0280007763.01.T01 AT1G30660 63.158 152 40 1 139 274 185 336 7.92e-56 187

Find 92 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACAGGTTCTCATGTATT+TGG 0.141732 2:-20214071 MsG0280007763.01.T01:intron
GAGGAGCTTGCACGCCGTTT+TGG 0.175124 2:-20215255 MsG0280007763.01.T01:CDS
AGAACATGCTCGAAAACTTT+TGG 0.253000 2:-20212571 MsG0280007763.01.T01:CDS
GTAACTGGAGTTCCGAATTC+AGG 0.302882 2:-20213254 MsG0280007763.01.T01:CDS
TCACAGGTTCTCATGTATTT+GGG 0.307475 2:-20214070 MsG0280007763.01.T01:intron
CGCATATTATCATCGAACTT+TGG 0.321937 2:-20213957 MsG0280007763.01.T01:CDS
ACTTTGTTCCATGGAGAATA+AGG 0.336711 2:-20213168 MsG0280007763.01.T01:intron
AGACGCTGAGCGGATGAGTT+TGG 0.340373 2:-20212044 MsG0280007763.01.T01:CDS
GCATATTATCATCGAACTTT+GGG 0.345820 2:-20213956 MsG0280007763.01.T01:CDS
CACTCACTCTTCCCTGAATT+CGG 0.347240 2:+20213242 None:intergenic
ATCGCTTCTTTCAGTGCATC+GGG 0.349171 2:+20214046 None:intergenic
CAGGAACACTAATACAATTT+CGG 0.377142 2:+20215669 None:intergenic
CATCAGTTGCAAGGATAATC+CGG 0.392294 2:+20215304 None:intergenic
TTCAAAGGAGTTGCCACCTC+TGG 0.402845 2:-20215624 MsG0280007763.01.T01:CDS
GAGACATCGACAAAAGGTTT+TGG 0.415814 2:-20217089 MsG0280007763.01.T01:CDS
ACTCATCCGCTCAGCGTCTT+CGG 0.424122 2:+20212048 None:intergenic
GACTATGTGCTTTAGGTTGA+AGG 0.424684 2:-20215728 MsG0280007763.01.T01:intron
TATGGATTGGATGACATAGT+TGG 0.425805 2:-20215835 MsG0280007763.01.T01:CDS
GGAGAACTGACCATAGTAAC+TGG 0.426651 2:-20213269 MsG0280007763.01.T01:CDS
GTATTCAAGGGGTGTTGAAA+TGG 0.427127 2:-20216712 MsG0280007763.01.T01:CDS
AATCGCTTCTTTCAGTGCAT+CGG 0.431723 2:+20214045 None:intergenic
ATCTTAATCAAAGTGCTGGC+TGG 0.433569 2:-20213199 MsG0280007763.01.T01:CDS
AACTTTCCTTTCAACTTAAG+TGG 0.437326 2:+20216653 None:intergenic
GGAGTTGCCACCTCTGGAAC+AGG 0.440701 2:-20215618 MsG0280007763.01.T01:intron
ACTGATGGAGGTGCGCCGTC+AGG 0.454559 2:+20215650 None:intergenic
ATTCGGAACTCCAGTTACTA+TGG 0.460960 2:+20213259 None:intergenic
CGGATTATCCTTGCAACTGA+TGG 0.462257 2:-20215303 MsG0280007763.01.T01:CDS
CGATCCACCTGGTCAAGCCT+TGG 0.467064 2:-20215280 MsG0280007763.01.T01:CDS
GAAATTTGCACTTTGTTCCA+TGG 0.467133 2:-20213177 MsG0280007763.01.T01:CDS
TGCTGTATGGTACGGAGTGT+TGG 0.469079 2:-20216604 MsG0280007763.01.T01:CDS
GATGTAAGCCATCGTATTCA+AGG 0.472777 2:-20216725 MsG0280007763.01.T01:CDS
AAGTTAAACAATCCACGTAT+AGG 0.474899 2:+20214004 None:intergenic
GTTTATATTGATAGGCATCC+CGG 0.476674 2:-20215323 MsG0280007763.01.T01:intron
GCTTTAGGTTGAAGGTGAAA+TGG 0.479602 2:-20215720 MsG0280007763.01.T01:intron
GTCAGACCGGCGATGCTGTA+TGG 0.481965 2:-20216617 MsG0280007763.01.T01:CDS
ATTATACAACTTTAGCATGC+TGG 0.483284 2:-20215969 MsG0280007763.01.T01:intron
GCATTCACATATCGTCGTAA+TGG 0.488987 2:-20217136 MsG0280007763.01.T01:CDS
AAAAGCCTTTCTTTAATGAT+CGG 0.489979 2:-20212536 MsG0280007763.01.T01:intron
TCTTACCGATCATTAAAGAA+AGG 0.490585 2:+20212531 None:intergenic
CTGGCTGGAATAATCTGAAT+GGG 0.493298 2:-20213913 MsG0280007763.01.T01:CDS
GTTACTATGGTCAGTTCTCC+CGG 0.495913 2:+20213272 None:intergenic
TGCAATCTTAATCAAAGTGC+TGG 0.496032 2:-20213203 MsG0280007763.01.T01:CDS
TACTTTCACCAGATTGTGCC+GGG 0.497341 2:-20213290 MsG0280007763.01.T01:intron
TATGACACTGGTCTCTCTAC+TGG 0.500616 2:-20213932 MsG0280007763.01.T01:CDS
GCTGTATGGTACGGAGTGTT+GGG 0.503222 2:-20216603 MsG0280007763.01.T01:CDS
ACTGGCTGGAATAATCTGAA+TGG 0.503322 2:-20213914 MsG0280007763.01.T01:CDS
TAACTGGAGTTCCGAATTCA+GGG 0.504392 2:-20213253 MsG0280007763.01.T01:CDS
TCCTCAGCCAAGGCTTGACC+AGG 0.506819 2:+20215273 None:intergenic
AATATGAAGAAGGCAAGCTC+TGG 0.529287 2:-20212018 MsG0280007763.01.T01:CDS
ACCTGGTCAAGCCTTGGCTG+AGG 0.537122 2:-20215274 MsG0280007763.01.T01:CDS
GCAACTGATGGCGATCCACC+TGG 0.539027 2:-20215291 MsG0280007763.01.T01:CDS
GCAGATGCTGGCGTGTCAGA+TGG 0.542409 2:-20214506 MsG0280007763.01.T01:intron
TTGAAATGGAGAAGAGCCTC+AGG 0.542425 2:-20216698 MsG0280007763.01.T01:CDS
AGTTGAAAGGAAAGTTCTAT+CGG 0.542948 2:-20216646 MsG0280007763.01.T01:CDS
ATAATAATATGATGATGATG+AGG 0.543972 2:+20215890 None:intergenic
ACACTGGTCTCTCTACTGGC+TGG 0.544550 2:-20213928 MsG0280007763.01.T01:CDS
TAATAATATGATGATGATGA+GGG 0.545509 2:+20215891 None:intergenic
CGAATTCAGGGAAGAGTGAG+TGG 0.547747 2:-20213241 MsG0280007763.01.T01:CDS
AAAGTACCACTTAAGTTGAA+AGG 0.555791 2:-20216659 MsG0280007763.01.T01:CDS
CAGAGATGAGGATGTTGCGC+TGG 0.558695 2:-20216544 MsG0280007763.01.T01:CDS
AGTACAGAGACATCGACAAA+AGG 0.558990 2:-20217095 MsG0280007763.01.T01:CDS
GCGTGCAAGCTCCTCAGCCA+AGG 0.560440 2:+20215263 None:intergenic
TCTACTGACCTTATTCTCCA+TGG 0.565024 2:+20213160 None:intergenic
TTACTTTCACCAGATTGTGC+CGG 0.567232 2:-20213291 MsG0280007763.01.T01:intron
ATCAGTTGCAAGGATAATCC+GGG 0.568001 2:+20215305 None:intergenic
CGCTGAGCGGATGAGTTTGG+AGG 0.569171 2:-20212041 MsG0280007763.01.T01:CDS
AAGCTAGCAATGGAAGAAGC+TGG 0.573143 2:-20215695 MsG0280007763.01.T01:CDS
ACCTCCATCAGTCTCTTCAA+AGG 0.579181 2:-20215639 MsG0280007763.01.T01:CDS
ATGTAAGCCATCGTATTCAA+GGG 0.580698 2:-20216724 MsG0280007763.01.T01:CDS
AGTTTGGAGGAATATGAAGA+AGG 0.589452 2:-20212028 MsG0280007763.01.T01:CDS
TTGAAATTTAAATATGCACA+AGG 0.593433 2:-20217282 None:intergenic
TCCGTACCATACAGCATCGC+CGG 0.594282 2:+20216611 None:intergenic
TCAACACCCCTTGAATACGA+TGG 0.595765 2:+20216717 None:intergenic
TCAGCCAAGGCTTGACCAGG+TGG 0.600418 2:+20215276 None:intergenic
TGAAATGGACAAGCTAGCAA+TGG 0.600784 2:-20215705 MsG0280007763.01.T01:CDS
AACTCCTTTGAAGAGACTGA+TGG 0.601053 2:+20215635 None:intergenic
ACCGGCGATGCTGTATGGTA+CGG 0.602941 2:-20216612 MsG0280007763.01.T01:CDS
CGAACTTTGGGATATGACAC+TGG 0.604166 2:-20213944 MsG0280007763.01.T01:CDS
AAGTAAGTGTAGCAGAGATG+AGG 0.616000 2:-20216556 MsG0280007763.01.T01:CDS
GTGGATCGCCATCAGTTGCA+AGG 0.619983 2:+20215295 None:intergenic
AGGATGTTGCGCTGGATGAG+TGG 0.654101 2:-20216536 MsG0280007763.01.T01:intron
TCCTTTGAAGAGACTGATGG+AGG 0.660045 2:+20215638 None:intergenic
AATTGTATTAGTGTTCCTGA+CGG 0.663772 2:-20215665 MsG0280007763.01.T01:CDS
CTATCGGATAGCAGTCAGAC+CGG 0.664281 2:-20216630 MsG0280007763.01.T01:CDS
TGATTGCAAAGATGCAAATG+AGG 0.670732 2:-20214463 MsG0280007763.01.T01:intron
CTTATCGCACAAAACACCTG+AGG 0.671204 2:+20216682 None:intergenic
TGAAATTTAAATATGCACAA+GGG 0.672416 2:-20217281 None:intergenic
TGTAAGCCATCGTATTCAAG+GGG 0.679734 2:-20216723 MsG0280007763.01.T01:CDS
TCGCTTCTTTCAGTGCATCG+GGG 0.709916 2:+20214047 None:intergenic
GCAGAACTATATCCTATACG+TGG 0.711376 2:-20214016 MsG0280007763.01.T01:CDS
GTATGGTACGGAGTGTTGGG+CGG 0.738692 2:-20216600 MsG0280007763.01.T01:CDS
GCTACGCCGAAGACGCTGAG+CGG 0.738729 2:-20212054 MsG0280007763.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTACATAAAATAAAATTA+TGG - Chr2:20214345-20214364 MsG0280007763.01.T01:intron 10.0%
!! ATAAAAATAAAGGAATTATT+AGG + Chr2:20214638-20214657 None:intergenic 10.0%
!! ATATCTTGAATAATTATTTA+TGG - Chr2:20215730-20215749 MsG0280007763.01.T01:intron 10.0%
!! ATTTATTATTCATTAATACA+TGG - Chr2:20214994-20215013 MsG0280007763.01.T01:intron 10.0%
!! AAAAACAAAACAAACAAAAA+AGG + Chr2:20216314-20216333 None:intergenic 15.0%
!! ATAGTATAAAAGATTTATAC+GGG + Chr2:20214230-20214249 None:intergenic 15.0%
!! ATTGTATAATGTTTATATTG+AGG - Chr2:20216234-20216253 MsG0280007763.01.T01:intron 15.0%
!! CATAGTATAAAAGATTTATA+CGG + Chr2:20214231-20214250 None:intergenic 15.0%
!! TTAATGAATAATAAATTCAC+AGG + Chr2:20214990-20215009 None:intergenic 15.0%
!! TTGTGTAATCATATATTTAT+TGG - Chr2:20212451-20212470 MsG0280007763.01.T01:intron 15.0%
!!! AATTCCTTTATTTTTATCAA+TGG - Chr2:20214641-20214660 MsG0280007763.01.T01:intron 15.0%
!!! ATTCCTTTATTTTTATCAAT+GGG - Chr2:20214642-20214661 MsG0280007763.01.T01:intron 15.0%
!!! CTGTTATTAAAATTTGTTTT+TGG - Chr2:20215794-20215813 MsG0280007763.01.T01:intron 15.0%
!!! GTATAAATCTTTTATACTAT+GGG - Chr2:20214230-20214249 MsG0280007763.01.T01:intron 15.0%
!!! TTGTTGATTTTTTGTTTTTA+GGG - Chr2:20215431-20215450 MsG0280007763.01.T01:intron 15.0%
!!! TTTATGTAACTTTTTCTAAT+AGG + Chr2:20214336-20214355 None:intergenic 15.0%
!!! TTTGTTGATTTTTTGTTTTT+AGG - Chr2:20215430-20215449 MsG0280007763.01.T01:intron 15.0%
!! AATAAAGGAATTATTAGGTT+TGG + Chr2:20214633-20214652 None:intergenic 20.0%
!! GTTATATCATAAACCAAATT+TGG + Chr2:20212990-20213009 None:intergenic 20.0%
!! TAGAAAAGTTAGTAGAAAAT+AGG - Chr2:20212809-20212828 MsG0280007763.01.T01:intron 20.0%
!! TATTACTCGTAAATTTAAGA+AGG - Chr2:20216882-20216901 MsG0280007763.01.T01:intron 20.0%
!! TTATATTAGTAGATATAAGC+CGG - Chr2:20215034-20215053 MsG0280007763.01.T01:intron 20.0%
!!! AGTTTGATTTGATATGAAAA+AGG + Chr2:20213146-20213165 None:intergenic 20.0%
!!! ATAATAATATGATGATGATG+AGG + Chr2:20213370-20213389 None:intergenic 20.0%
!!! ATAATTGCTGTTTAAGATTA+AGG - Chr2:20214201-20214220 MsG0280007763.01.T01:intron 20.0%
!!! ATCTTTAGTTACTTAAGTTT+TGG - Chr2:20217015-20217034 MsG0280007763.01.T01:intron 20.0%
!!! ATGATACTTTTTATCTCATA+AGG - Chr2:20217266-20217285 MsG0280007763.01.T01:CDS 20.0%
!!! CATCATATTATTATTTTTGC+AGG - Chr2:20213376-20213395 MsG0280007763.01.T01:intron 20.0%
!!! CGTATAAATCTTTTATACTA+TGG - Chr2:20214229-20214248 MsG0280007763.01.T01:intron 20.0%
!!! CTCATATTTTAATACATACT+TGG - Chr2:20214868-20214887 MsG0280007763.01.T01:intron 20.0%
!!! TAATAATATGATGATGATGA+GGG + Chr2:20213369-20213388 None:intergenic 20.0%
!!! TAATTGCTGTTTAAGATTAA+GGG - Chr2:20214202-20214221 MsG0280007763.01.T01:intron 20.0%
!!! TTATTTCAGTTTTCTCATTA+AGG - Chr2:20216983-20217002 MsG0280007763.01.T01:intron 20.0%
!!! TTCCTTTATTTTTATCAATG+GGG - Chr2:20214643-20214662 MsG0280007763.01.T01:intron 20.0%
!!! TTTAGCATTCTTTTGATTTA+TGG - Chr2:20214263-20214282 MsG0280007763.01.T01:intron 20.0%
!!! TTTTCTCTGTTTATATTGAT+AGG - Chr2:20213926-20213945 MsG0280007763.01.T01:CDS 20.0%
! AAAAGCCTTTCTTTAATGAT+CGG - Chr2:20216721-20216740 MsG0280007763.01.T01:CDS 25.0%
! AACAAACCATAAAATCACAA+TGG + Chr2:20216370-20216389 None:intergenic 25.0%
! AAGTTGTATAATAGAAACTG+TGG + Chr2:20213280-20213299 None:intergenic 25.0%
! AATTACTAAGACACTTTCTT+TGG + Chr2:20216161-20216180 None:intergenic 25.0%
! AATTATTAGGTTTGGATGAT+GGG + Chr2:20214625-20214644 None:intergenic 25.0%
! AGTTGTATAATAGAAACTGT+GGG + Chr2:20213279-20213298 None:intergenic 25.0%
! ATAATGAGAAACCTACATAA+AGG + Chr2:20214683-20214702 None:intergenic 25.0%
! ATATTGTGTGAAAAAACGTA+AGG + Chr2:20215714-20215733 None:intergenic 25.0%
! ATTGTCTACTTGTATTCTTT+AGG - Chr2:20216451-20216470 MsG0280007763.01.T01:intron 25.0%
! CACAAAATATCTCTGATTAA+CGG + Chr2:20216394-20216413 None:intergenic 25.0%
! CTTTACAAAACTCAATTGTA+AGG + Chr2:20214592-20214611 None:intergenic 25.0%
! GAATAAGATCAAGTTAAAAG+TGG + Chr2:20216137-20216156 None:intergenic 25.0%
! GATAAACAAGAGAAAAATGT+TGG + Chr2:20214730-20214749 None:intergenic 25.0%
! GATTGTGAATTAGAAAATGA+AGG + Chr2:20217074-20217093 None:intergenic 25.0%
! GTAAATTTAAGAAGGAAGTA+TGG - Chr2:20216890-20216909 MsG0280007763.01.T01:intron 25.0%
! TAATGAGAAACCTACATAAA+GGG + Chr2:20214682-20214701 None:intergenic 25.0%
! TACAAACAAACATCTTCAAA+TGG + Chr2:20215128-20215147 None:intergenic 25.0%
! TATTAGAGAAACCATTAGAA+AGG - Chr2:20212941-20212960 MsG0280007763.01.T01:intron 25.0%
! TCATTGTTTGCATAACATTA+TGG + Chr2:20216569-20216588 None:intergenic 25.0%
! TCTAACATACATAATTGTGT+TGG - Chr2:20214919-20214938 MsG0280007763.01.T01:intron 25.0%
! TGAAATGAGTTTATAAAGAG+TGG - Chr2:20214559-20214578 MsG0280007763.01.T01:intron 25.0%
! TGAATGTTGTAAATTGTAGT+TGG - Chr2:20215602-20215621 MsG0280007763.01.T01:intron 25.0%
! TGGTTTATGATATAACACTA+TGG - Chr2:20212994-20213013 MsG0280007763.01.T01:intron 25.0%
! TTAACTTATCCTTACAAAAC+CGG + Chr2:20214414-20214433 None:intergenic 25.0%
! TTCTAATAGGAATAAACTAC+AGG + Chr2:20214323-20214342 None:intergenic 25.0%
! TTGTCTACTTGTATTCTTTA+GGG - Chr2:20216452-20216471 MsG0280007763.01.T01:intron 25.0%
! TTGTGAAAACAAAATAACAC+AGG + Chr2:20212078-20212097 None:intergenic 25.0%
! TTTATGGTTATATGACAGAA+TGG - Chr2:20214279-20214298 MsG0280007763.01.T01:intron 25.0%
!! AAACTGATTCATAACTTAAC+CGG + Chr2:20216511-20216530 None:intergenic 25.0%
!! ACTTTTTATCTCATAAGGTA+AGG - Chr2:20217271-20217290 MsG0280007763.01.T01:CDS 25.0%
!! ATAAAAGATCTTTTCAGTGT+CGG + Chr2:20213405-20213424 None:intergenic 25.0%
!! CATAAATATTCAAGTTAACC+AGG + Chr2:20215514-20215533 None:intergenic 25.0%
!! TCTACTAACTTTTCTACTAT+AGG + Chr2:20212805-20212824 None:intergenic 25.0%
!! TCTTTTGATAGATAGATAGA+AGG + Chr2:20216857-20216876 None:intergenic 25.0%
!! TGAAAAGATCTTTTATGGAT+TGG - Chr2:20213409-20213428 MsG0280007763.01.T01:intron 25.0%
!!! AAACTCTACATCTTTTTTCA+TGG + Chr2:20215579-20215598 None:intergenic 25.0%
!!! ACCATCTTAGGTTTTATATT+GGG + Chr2:20214438-20214457 None:intergenic 25.0%
!!! ATTATTTTTTACTGCACTGT+AGG - Chr2:20216659-20216678 MsG0280007763.01.T01:CDS 25.0%
!!! TACCATCTTAGGTTTTATAT+TGG + Chr2:20214439-20214458 None:intergenic 25.0%
!!! TATGAAAAAGGCATTTGATA+AGG + Chr2:20213134-20213153 None:intergenic 25.0%
!!! TCCTTTATTTTTATCAATGG+GGG - Chr2:20214644-20214663 MsG0280007763.01.T01:intron 25.0%
!!! TGATGGTTTTTTATGTTGTT+TGG + Chr2:20215464-20215483 None:intergenic 25.0%
AAAATAGGCTTAGATGGTTT+GGG - Chr2:20212824-20212843 MsG0280007763.01.T01:intron 30.0%
AACAATTGAAAACATGAAGC+AGG + Chr2:20214958-20214977 None:intergenic 30.0%
AACCATTAGAAAGGATTTAG+AGG - Chr2:20212950-20212969 MsG0280007763.01.T01:intron 30.0%
AACTTTCCTTTCAACTTAAG+TGG + Chr2:20212607-20212626 None:intergenic 30.0%
AAGTTAAACAATCCACGTAT+AGG + Chr2:20215256-20215275 None:intergenic 30.0%
AATAAGTTACAAGGTTGCTA+CGG + Chr2:20215168-20215187 None:intergenic 30.0%
AATTCTAATTCTGCAAAGCT+AGG - Chr2:20213787-20213806 MsG0280007763.01.T01:intron 30.0%
AATTGTATTAGTGTTCCTGA+CGG - Chr2:20213592-20213611 MsG0280007763.01.T01:intron 30.0%
ACAAAACTCAATTGTAAGGT+GGG + Chr2:20214588-20214607 None:intergenic 30.0%
ACCCAATATAAAACCTAAGA+TGG - Chr2:20214434-20214453 MsG0280007763.01.T01:intron 30.0%
ACTCTTTATAAGCTCATTTC+AGG + Chr2:20214371-20214390 None:intergenic 30.0%
AGACTAGAAATGTTAGGTTT+AGG - Chr2:20212746-20212765 MsG0280007763.01.T01:intron 30.0%
AGAGGAATTTGATATACTTG+AGG - Chr2:20216272-20216291 MsG0280007763.01.T01:intron 30.0%
AGTATATTCTAGCAATGTGT+AGG + Chr2:20213718-20213737 None:intergenic 30.0%
AGTTGAAAGGAAAGTTCTAT+CGG - Chr2:20212611-20212630 MsG0280007763.01.T01:intron 30.0%
ATGCTCAATTCAATTACGTA+CGG + Chr2:20212216-20212235 None:intergenic 30.0%
ATTATACAACTTTAGCATGC+TGG - Chr2:20213288-20213307 MsG0280007763.01.T01:intron 30.0%
ATTCAGCACTCAAAATCATA+GGG + Chr2:20216827-20216846 None:intergenic 30.0%
ATTTATTGGAAAGTCCTTCA+CGG - Chr2:20212465-20212484 MsG0280007763.01.T01:intron 30.0%
CACAAAATCCAACAATATGT+GGG + Chr2:20216628-20216647 None:intergenic 30.0%
CAGGAACACTAATACAATTT+CGG + Chr2:20213591-20213610 None:intergenic 30.0%
CTAAATCCATGAAAAGTTGA+GGG - Chr2:20212415-20212434 MsG0280007763.01.T01:intron 30.0%
GAAATAACAATGATTACGCT+AGG + Chr2:20216970-20216989 None:intergenic 30.0%
GAATTATTAGGTTTGGATGA+TGG + Chr2:20214626-20214645 None:intergenic 30.0%
GAATTGTGAAGAGAATCATA+TGG + Chr2:20212317-20212336 None:intergenic 30.0%
GAGGAATTTGATATACTTGA+GGG - Chr2:20216273-20216292 MsG0280007763.01.T01:intron 30.0%
GCATATTATCATCGAACTTT+GGG - Chr2:20215301-20215320 MsG0280007763.01.T01:CDS 30.0%
GGATTTCATTATGTTGACAA+AGG - Chr2:20212375-20212394 MsG0280007763.01.T01:intron 30.0%
GTGCATAAGATATAAGAACT+AGG + Chr2:20212030-20212049 None:intergenic 30.0%
GTGTCTTAGTAATTTCTAAC+TGG - Chr2:20216167-20216186 MsG0280007763.01.T01:intron 30.0%
TAAAAAACCATCATGATTGC+TGG - Chr2:20215471-20215490 MsG0280007763.01.T01:intron 30.0%
TACAAAACTCAATTGTAAGG+TGG + Chr2:20214589-20214608 None:intergenic 30.0%
TAGTAGAAAATAGGCTTAGA+TGG - Chr2:20212818-20212837 MsG0280007763.01.T01:intron 30.0%
TCGGTAAGATTTGAATTGTA+TGG - Chr2:20216740-20216759 MsG0280007763.01.T01:intron 30.0%
TCTAAATCCATGAAAAGTTG+AGG - Chr2:20212414-20212433 MsG0280007763.01.T01:intron 30.0%
TCTTACCGATCATTAAAGAA+AGG + Chr2:20216729-20216748 None:intergenic 30.0%
TGAAATGAGCTTATAAAGAG+TGG - Chr2:20214370-20214389 MsG0280007763.01.T01:intron 30.0%
! AACCTTATAATTTGTAGAGC+AGG + Chr2:20213479-20213498 None:intergenic 30.0%
! ATATGAGATATCTAAAGTGC+AGG + Chr2:20214855-20214874 None:intergenic 30.0%
! CAATAAGTTGGATCCAAATT+TGG - Chr2:20212974-20212993 MsG0280007763.01.T01:intron 30.0%
! CTAACTTTTCTTTCCCAAAA+CGG + Chr2:20214019-20214038 None:intergenic 30.0%
! GACACTGAAAAGATCTTTTA+TGG - Chr2:20213404-20213423 MsG0280007763.01.T01:intron 30.0%
! GTTTCTCTAATAGTTTTCCT+AGG + Chr2:20212933-20212952 None:intergenic 30.0%
! TAAGGTCAGTAGATAGTTTT+TGG - Chr2:20216107-20216126 MsG0280007763.01.T01:intron 30.0%
! TGATTGAAAGCATAACTACA+AGG + Chr2:20214098-20214117 None:intergenic 30.0%
! TGTACTCCATTGTGATTTTA+TGG - Chr2:20216361-20216380 MsG0280007763.01.T01:intron 30.0%
! TGTTTTCAATTGTTCATGCA+TGG - Chr2:20214964-20214983 MsG0280007763.01.T01:intron 30.0%
! TTAGTCTTCTGATGTTTGTT+TGG - Chr2:20216538-20216557 MsG0280007763.01.T01:CDS 30.0%
! TTGAATAAAGCAGTTTTCAC+CGG + Chr2:20213896-20213915 None:intergenic 30.0%
!! AAAGTACCACTTAAGTTGAA+AGG - Chr2:20212598-20212617 MsG0280007763.01.T01:intron 30.0%
!! AGGTGATTTTGATATGATAG+AGG - Chr2:20216254-20216273 MsG0280007763.01.T01:intron 30.0%
!! GAATGGGTTATACAATGTAA+GGG - Chr2:20215360-20215379 MsG0280007763.01.T01:intron 30.0%
!! GAGTTTTGTAAAGATGAGTT+AGG - Chr2:20214599-20214618 MsG0280007763.01.T01:intron 30.0%
!! TAATACATGGCTTGTTATTG+TGG - Chr2:20215007-20215026 MsG0280007763.01.T01:intron 30.0%
!! TGAATGGGTTATACAATGTA+AGG - Chr2:20215359-20215378 MsG0280007763.01.T01:intron 30.0%
!!! CCTTTATTTTTATCAATGGG+GGG - Chr2:20214645-20214664 MsG0280007763.01.T01:intron 30.0%
AAAATCCAACAATATGTGGG+AGG + Chr2:20216625-20216644 None:intergenic 35.0%
AAGCAAACTATGGAAAGTCT+TGG + Chr2:20216795-20216814 None:intergenic 35.0%
AATAAACTACAGGCGTACAA+TGG + Chr2:20214313-20214332 None:intergenic 35.0%
ACTTTGTTCCATGGAGAATA+AGG - Chr2:20216089-20216108 MsG0280007763.01.T01:intron 35.0%
AGTCAAGTTAAAAGAGGTAG+AGG - Chr2:20212903-20212922 MsG0280007763.01.T01:intron 35.0%
AGTTTGGAGGAATATGAAGA+AGG - Chr2:20217229-20217248 MsG0280007763.01.T01:intron 35.0%
ATAAAAAAGACCTGTTCCAG+AGG + Chr2:20213652-20213671 None:intergenic 35.0%
ATGATTACGCTAGGAATAGA+AGG + Chr2:20216961-20216980 None:intergenic 35.0%
ATGCAAACAATGAATGACTG+TGG - Chr2:20216576-20216595 MsG0280007763.01.T01:CDS 35.0%
ATGTAAGCCATCGTATTCAA+GGG - Chr2:20212533-20212552 MsG0280007763.01.T01:intron 35.0%
ATGTGGGCTCTACATAATAA+GGG + Chr2:20213097-20213116 None:intergenic 35.0%
CAACCTTGTAACTTATTCAC+AGG - Chr2:20215171-20215190 MsG0280007763.01.T01:intron 35.0%
CATTCAGCACTCAAAATCAT+AGG + Chr2:20216828-20216847 None:intergenic 35.0%
CCCCCCATTGATAAAAATAA+AGG + Chr2:20214648-20214667 None:intergenic 35.0%
CGCATATTATCATCGAACTT+TGG - Chr2:20215300-20215319 MsG0280007763.01.T01:CDS 35.0%
GAAAATAGGCTTAGATGGTT+TGG - Chr2:20212823-20212842 MsG0280007763.01.T01:intron 35.0%
GAAATTTGCACTTTGTTCCA+TGG - Chr2:20216080-20216099 MsG0280007763.01.T01:intron 35.0%
GAACCTGTGAATAAGTTACA+AGG + Chr2:20215177-20215196 None:intergenic 35.0%
GACAACAATGAAGCAAACTA+TGG + Chr2:20216805-20216824 None:intergenic 35.0%
GACCTCTAAATCCTTTCTAA+TGG + Chr2:20212955-20212974 None:intergenic 35.0%
GCACAAAATCCAACAATATG+TGG + Chr2:20216629-20216648 None:intergenic 35.0%
GCCTACATGGAATAAAAGTA+AGG - Chr2:20214534-20214553 MsG0280007763.01.T01:intron 35.0%
GGATTTAGAGGTCAATAAGT+TGG - Chr2:20212962-20212981 MsG0280007763.01.T01:intron 35.0%
GTGGTAAGACTAGAAATGTT+AGG - Chr2:20212740-20212759 MsG0280007763.01.T01:intron 35.0%
GTTAACCAGGTCATATAAAG+AGG + Chr2:20215501-20215520 None:intergenic 35.0%
GTTTATATTGATAGGCATCC+CGG - Chr2:20213934-20213953 MsG0280007763.01.T01:CDS 35.0%
TAAGAAGAGTAGATCAATGG+AGG - Chr2:20212878-20212897 MsG0280007763.01.T01:intron 35.0%
TCAAATACTCCCTGATCTAA+GGG + Chr2:20217125-20217144 None:intergenic 35.0%
TCACAGGTTCTCATGTATTT+GGG - Chr2:20215187-20215206 MsG0280007763.01.T01:intron 35.0%
TCGTAAGAAGAGTAGATCAA+TGG - Chr2:20212875-20212894 MsG0280007763.01.T01:intron 35.0%
TCTTCTTACGACAGTATCTA+CGG + Chr2:20212866-20212885 None:intergenic 35.0%
TGATTACGCTAGGAATAGAA+GGG + Chr2:20216960-20216979 None:intergenic 35.0%
TGATTGCAAAGATGCAAATG+AGG - Chr2:20214794-20214813 MsG0280007763.01.T01:intron 35.0%
TGCAATCTTAATCAAAGTGC+TGG - Chr2:20216054-20216073 MsG0280007763.01.T01:intron 35.0%
TGCCTGCTCTACAAATTATA+AGG - Chr2:20213474-20213493 MsG0280007763.01.T01:intron 35.0%
TTACCAAACATTATCCCACT+AGG - Chr2:20215856-20215875 MsG0280007763.01.T01:CDS 35.0%
TTCACAGGTTCTCATGTATT+TGG - Chr2:20215186-20215205 MsG0280007763.01.T01:intron 35.0%
TTGCAAAGATGAACTAAAGC+AGG - Chr2:20213835-20213854 MsG0280007763.01.T01:intron 35.0%
! AAAGCAATTTTCCTTTGCTG+GGG + Chr2:20216936-20216955 None:intergenic 35.0%
! ACATGAAGTATCAGTATCTG+TGG - Chr2:20213810-20213829 MsG0280007763.01.T01:intron 35.0%
! AGAACATGCTCGAAAACTTT+TGG - Chr2:20216686-20216705 MsG0280007763.01.T01:CDS 35.0%
! ATTTGATAAGGTGCCAAGAA+AGG + Chr2:20213122-20213141 None:intergenic 35.0%
! CAAAGCAATTTTCCTTTGCT+GGG + Chr2:20216937-20216956 None:intergenic 35.0%
! GATTGTAATTTGAGTTCAGC+AGG - Chr2:20215644-20215663 MsG0280007763.01.T01:CDS 35.0%
! GTTTATCGACTATGTGCTTT+AGG - Chr2:20213522-20213541 MsG0280007763.01.T01:intron 35.0%
! TATCTAAAGTGCAGGTAAAG+TGG + Chr2:20214847-20214866 None:intergenic 35.0%
! TGAAAGCATAACTACAAGGA+TGG + Chr2:20214094-20214113 None:intergenic 35.0%
!! GCCTTACTTTTATTCCATGT+AGG + Chr2:20214538-20214557 None:intergenic 35.0%
!! TATGGATTGGATGACATAGT+TGG - Chr2:20213422-20213441 MsG0280007763.01.T01:intron 35.0%
!!! TCATCAGTCTTCCCTTTTTT+AGG + Chr2:20214777-20214796 None:intergenic 35.0%
AAACATTATCCCACTAGGTG+GGG - Chr2:20215861-20215880 MsG0280007763.01.T01:CDS 40.0%
AAGTAAGTGTAGCAGAGATG+AGG - Chr2:20212701-20212720 MsG0280007763.01.T01:intron 40.0%
AATATGAAGAAGGCAAGCTC+TGG - Chr2:20217239-20217258 MsG0280007763.01.T01:intron 40.0%
AATCGCTTCTTTCAGTGCAT+CGG + Chr2:20215215-20215234 None:intergenic 40.0%
ACAGCAAACTGACAGTGAAA+CGG + Chr2:20216480-20216499 None:intergenic 40.0%
ACTGGCTGGAATAATCTGAA+TGG - Chr2:20215343-20215362 MsG0280007763.01.T01:intron 40.0%
AGTACAGAGACATCGACAAA+AGG - Chr2:20212162-20212181 MsG0280007763.01.T01:intron 40.0%
ATCAAGTCCTCCCTTTATGT+AGG - Chr2:20214669-20214688 MsG0280007763.01.T01:intron 40.0%
ATCAGTTGCAAGGATAATCC+GGG + Chr2:20213955-20213974 None:intergenic 40.0%
ATTCCCATGTTTCAAACAGC+CGG + Chr2:20215056-20215075 None:intergenic 40.0%
ATTCGGAACTCCAGTTACTA+TGG + Chr2:20216001-20216020 None:intergenic 40.0%
CAAACATTATCCCACTAGGT+GGG - Chr2:20215860-20215879 MsG0280007763.01.T01:CDS 40.0%
CATCAGTTGCAAGGATAATC+CGG + Chr2:20213956-20213975 None:intergenic 40.0%
CATGTGGGCTCTACATAATA+AGG + Chr2:20213098-20213117 None:intergenic 40.0%
CTGGCTGGAATAATCTGAAT+GGG - Chr2:20215344-20215363 MsG0280007763.01.T01:intron 40.0%
CTTCTTACGACAGTATCTAC+GGG + Chr2:20212865-20212884 None:intergenic 40.0%
GAGGAGAGTCAAGTTAAAAG+AGG - Chr2:20212897-20212916 MsG0280007763.01.T01:intron 40.0%
GATGTAAGCCATCGTATTCA+AGG - Chr2:20212532-20212551 MsG0280007763.01.T01:intron 40.0%
GCAGAACTATATCCTATACG+TGG - Chr2:20215241-20215260 MsG0280007763.01.T01:intron 40.0%
GCATTCACATATCGTCGTAA+TGG - Chr2:20212121-20212140 MsG0280007763.01.T01:intron 40.0%
GTCAAATACTCCCTGATCTA+AGG + Chr2:20217126-20217145 None:intergenic 40.0%
GTGTCAGATGGCCTAAAAAA+GGG - Chr2:20214763-20214782 MsG0280007763.01.T01:intron 40.0%
TAACTGGAGTTCCGAATTCA+GGG - Chr2:20216004-20216023 MsG0280007763.01.T01:intron 40.0%
TCTACTGACCTTATTCTCCA+TGG + Chr2:20216100-20216119 None:intergenic 40.0%
TGAAATGGACAAGCTAGCAA+TGG - Chr2:20213552-20213571 MsG0280007763.01.T01:intron 40.0%
TGAGAAACCTACATAAAGGG+AGG + Chr2:20214679-20214698 None:intergenic 40.0%
TGTAAGCCATCGTATTCAAG+GGG - Chr2:20212534-20212553 MsG0280007763.01.T01:intron 40.0%
TGTGGGCTCTACATAATAAG+GGG + Chr2:20213096-20213115 None:intergenic 40.0%
TTCCACTCCTTTCTATGTAC+CGG - Chr2:20213874-20213893 MsG0280007763.01.T01:intron 40.0%
! AACTCCTTTGAAGAGACTGA+TGG + Chr2:20213625-20213644 None:intergenic 40.0%
! AAGCAATTTTCCTTTGCTGG+GGG + Chr2:20216935-20216954 None:intergenic 40.0%
! CTTTTATTCCATGTAGGCCT+TGG + Chr2:20214532-20214551 None:intergenic 40.0%
! GAGACATCGACAAAAGGTTT+TGG - Chr2:20212168-20212187 MsG0280007763.01.T01:intron 40.0%
! GCAAAGCAATTTTCCTTTGC+TGG + Chr2:20216938-20216957 None:intergenic 40.0%
! GTTTTCACCGGTACATAGAA+AGG + Chr2:20213884-20213903 None:intergenic 40.0%
! TCTTGTTTATCTGCAGATGC+TGG - Chr2:20214739-20214758 MsG0280007763.01.T01:intron 40.0%
!! AAAACCGGTTTGTAAGGTGA+GGG + Chr2:20214399-20214418 None:intergenic 40.0%
!! ATCTTAATCAAAGTGCTGGC+TGG - Chr2:20216058-20216077 MsG0280007763.01.T01:intron 40.0%
!! CCTTACAAAACCGGTTTGTA+AGG + Chr2:20214405-20214424 None:intergenic 40.0%
!! CCTTACAAACCGGTTTTGTA+AGG - Chr2:20214402-20214421 MsG0280007763.01.T01:intron 40.0%
!! GACTATGTGCTTTAGGTTGA+AGG - Chr2:20213529-20213548 MsG0280007763.01.T01:intron 40.0%
!! GCTTTAGGTTGAAGGTGAAA+TGG - Chr2:20213537-20213556 MsG0280007763.01.T01:intron 40.0%
!! GTATTCAAGGGGTGTTGAAA+TGG - Chr2:20212545-20212564 MsG0280007763.01.T01:CDS 40.0%
!!! CAGTTTGCTGTCTTTTGAAC+CGG - Chr2:20216489-20216508 MsG0280007763.01.T01:intron 40.0%
AAAAAGACCTGTTCCAGAGG+TGG + Chr2:20213649-20213668 None:intergenic 45.0%
AAACTACAGGCGTACAATGG+CGG + Chr2:20214310-20214329 None:intergenic 45.0%
AAAGAGGTAGAGGAAGACCT+AGG - Chr2:20212913-20212932 MsG0280007763.01.T01:intron 45.0%
AACATTATCCCACTAGGTGG+GGG - Chr2:20215862-20215881 MsG0280007763.01.T01:CDS 45.0%
AAGCTAGCAATGGAAGAAGC+TGG - Chr2:20213562-20213581 MsG0280007763.01.T01:intron 45.0%
AATATTCAAGCCAGCCGTGA+AGG + Chr2:20212482-20212501 None:intergenic 45.0%
ACCTCCATCAGTCTCTTCAA+AGG - Chr2:20213618-20213637 MsG0280007763.01.T01:intron 45.0%
ATCGCTTCTTTCAGTGCATC+GGG + Chr2:20215214-20215233 None:intergenic 45.0%
CACTCACTCTTCCCTGAATT+CGG + Chr2:20216018-20216037 None:intergenic 45.0%
CATTGCCTCCCACATATTGT+TGG - Chr2:20216617-20216636 MsG0280007763.01.T01:CDS 45.0%
CCAAACATTATCCCACTAGG+TGG - Chr2:20215859-20215878 MsG0280007763.01.T01:CDS 45.0%
CCACCTAGTGGGATAATGTT+TGG + Chr2:20215862-20215881 None:intergenic 45.0%
CGATGGCTTACATCTGCTTA+TGG + Chr2:20212526-20212545 None:intergenic 45.0%
CGGATTATCCTTGCAACTGA+TGG - Chr2:20213954-20213973 MsG0280007763.01.T01:CDS 45.0%
CGTGTCAGATGGCCTAAAAA+AGG - Chr2:20214762-20214781 MsG0280007763.01.T01:intron 45.0%
CTTATCGCACAAAACACCTG+AGG + Chr2:20212578-20212597 None:intergenic 45.0%
GCTGACCTCTTTATATGACC+TGG - Chr2:20215493-20215512 MsG0280007763.01.T01:intron 45.0%
GCTTACATCTGCTTATGGCA+GGG + Chr2:20212521-20212540 None:intergenic 45.0%
GGAGAACTGACCATAGTAAC+TGG - Chr2:20215988-20216007 MsG0280007763.01.T01:intron 45.0%
GGGTGTATTGGGAAAAACCA+AGG - Chr2:20214512-20214531 MsG0280007763.01.T01:intron 45.0%
GTAACTGGAGTTCCGAATTC+AGG - Chr2:20216003-20216022 MsG0280007763.01.T01:intron 45.0%
GTATCGAGACCCTTAGATCA+GGG - Chr2:20217113-20217132 MsG0280007763.01.T01:CDS 45.0%
GTGGGCTCTACATAATAAGG+GGG + Chr2:20213095-20213114 None:intergenic 45.0%
TCAACACCCCTTGAATACGA+TGG + Chr2:20212543-20212562 None:intergenic 45.0%
TGTATCGAGACCCTTAGATC+AGG - Chr2:20217112-20217131 MsG0280007763.01.T01:CDS 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - Chr2:20212559-20212578 MsG0280007763.01.T01:CDS 45.0%
! AAGCCGGCTGTTTGAAACAT+GGG - Chr2:20215050-20215069 MsG0280007763.01.T01:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr2:20213043-20213062 None:intergenic 45.0%
! ACTGAGCCCTCAACTTTTCA+TGG + Chr2:20212424-20212443 None:intergenic 45.0%
! AGCAATTTTCCTTTGCTGGG+GGG + Chr2:20216934-20216953 None:intergenic 45.0%
! AGGAGCTCTGATACCATCTT+AGG + Chr2:20214450-20214469 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr2:20213044-20213063 None:intergenic 45.0%
! TAAGCCGGCTGTTTGAAACA+TGG - Chr2:20215049-20215068 MsG0280007763.01.T01:intron 45.0%
! TATGACACTGGTCTCTCTAC+TGG - Chr2:20215325-20215344 MsG0280007763.01.T01:intron 45.0%
! TCCTTTGAAGAGACTGATGG+AGG + Chr2:20213622-20213641 None:intergenic 45.0%
!! AAACCGGTTTGTAAGGTGAG+GGG + Chr2:20214398-20214417 None:intergenic 45.0%
!! CAAAACCGGTTTGTAAGGTG+AGG + Chr2:20214400-20214419 None:intergenic 45.0%
!! CATCGACAAAAGGTTTTGGC+AGG - Chr2:20212172-20212191 MsG0280007763.01.T01:intron 45.0%
!! CGAACTTTGGGATATGACAC+TGG - Chr2:20215313-20215332 MsG0280007763.01.T01:intron 45.0%
!! ATAAAAAATGATTAATTATT+TGG - Chr2:20215762-20215781 MsG0280007763.01.T01:intron 5.0%
ACACCGTTAGAGAGAGAGTG+GGG - Chr2:20212773-20212792 MsG0280007763.01.T01:intron 50.0%
ACATTATCCCACTAGGTGGG+GGG - Chr2:20215863-20215882 MsG0280007763.01.T01:CDS 50.0%
AGAGCCCACATGTCCTTTCT+TGG - Chr2:20213106-20213125 MsG0280007763.01.T01:intron 50.0%
AGGTCAGCCAGCAATCATGA+TGG + Chr2:20215481-20215500 None:intergenic 50.0%
AGGTGCCAAGAAAGGACATG+TGG + Chr2:20213114-20213133 None:intergenic 50.0%
ATTGGAAAGTCCTTCACGGC+TGG - Chr2:20212469-20212488 MsG0280007763.01.T01:intron 50.0%
CACCGGTACATAGAAAGGAG+TGG + Chr2:20213879-20213898 None:intergenic 50.0%
CCACTGTCAACTCTCTTACG+AGG - Chr2:20212354-20212373 MsG0280007763.01.T01:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr2:20213042-20213061 MsG0280007763.01.T01:intron 50.0%
CCTCGTAAGAGAGTTGACAG+TGG + Chr2:20212357-20212376 None:intergenic 50.0%
CGAATTCAGGGAAGAGTGAG+TGG - Chr2:20216016-20216035 MsG0280007763.01.T01:intron 50.0%
CTATCGGATAGCAGTCAGAC+CGG - Chr2:20212627-20212646 MsG0280007763.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr2:20213039-20213058 None:intergenic 50.0%
GACACCGTTAGAGAGAGAGT+GGG - Chr2:20212772-20212791 MsG0280007763.01.T01:intron 50.0%
GGCTTACATCTGCTTATGGC+AGG + Chr2:20212522-20212541 None:intergenic 50.0%
GGGAAAAACCAAGGCCTACA+TGG - Chr2:20214521-20214540 MsG0280007763.01.T01:intron 50.0%
GGTGCCAAGAAAGGACATGT+GGG + Chr2:20213113-20213132 None:intergenic 50.0%
GTATCAGAGCTCCTGTCGAT+CGG - Chr2:20214456-20214475 MsG0280007763.01.T01:intron 50.0%
TACCCCCACTCTCTCTCTAA+CGG + Chr2:20212779-20212798 None:intergenic 50.0%
TATCAGAGCTCCTGTCGATC+GGG - Chr2:20214457-20214476 MsG0280007763.01.T01:intron 50.0%
TCGCTTCTTTCAGTGCATCG+GGG + Chr2:20215213-20215232 None:intergenic 50.0%
TGACACCGTTAGAGAGAGAG+TGG - Chr2:20212771-20212790 MsG0280007763.01.T01:intron 50.0%
TGCTGTATGGTACGGAGTGT+TGG - Chr2:20212653-20212672 MsG0280007763.01.T01:intron 50.0%
TTCAAAGGAGTTGCCACCTC+TGG - Chr2:20213633-20213652 MsG0280007763.01.T01:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr2:20213045-20213064 None:intergenic 50.0%
! GCTGTATGGTACGGAGTGTT+GGG - Chr2:20212654-20212673 MsG0280007763.01.T01:intron 50.0%
ACCGGCGATGCTGTATGGTA+CGG - Chr2:20212645-20212664 MsG0280007763.01.T01:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + Chr2:20213031-20213050 None:intergenic 55.0%
ACTCATCCGCTCAGCGTCTT+CGG + Chr2:20217212-20217231 None:intergenic 55.0%
AGACGCTGAGCGGATGAGTT+TGG - Chr2:20217213-20217232 MsG0280007763.01.T01:intron 55.0%
AGGATGTTGCGCTGGATGAG+TGG - Chr2:20212721-20212740 MsG0280007763.01.T01:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG - Chr2:20213030-20213049 MsG0280007763.01.T01:intron 55.0%
CACAATACCCCCCACCTAGT+GGG + Chr2:20215873-20215892 None:intergenic 55.0%
CACCGTTAGAGAGAGAGTGG+GGG - Chr2:20212774-20212793 MsG0280007763.01.T01:intron 55.0%
CAGAGATGAGGATGTTGCGC+TGG - Chr2:20212713-20212732 MsG0280007763.01.T01:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr2:20213037-20213056 MsG0280007763.01.T01:intron 55.0%
GCACCCCTCACCTTACAAAC+CGG - Chr2:20214392-20214411 MsG0280007763.01.T01:intron 55.0%
GTGGATCGCCATCAGTTGCA+AGG + Chr2:20213965-20213984 None:intergenic 55.0%
TCACAATACCCCCCACCTAG+TGG + Chr2:20215874-20215893 None:intergenic 55.0%
TCCGTACCATACAGCATCGC+CGG + Chr2:20212649-20212668 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - Chr2:20213031-20213050 MsG0280007763.01.T01:intron 55.0%
! ACACTGGTCTCTCTACTGGC+TGG - Chr2:20215329-20215348 MsG0280007763.01.T01:intron 55.0%
!! AGGAGCTTGCACGCCGTTTT+GGG - Chr2:20214003-20214022 MsG0280007763.01.T01:CDS 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - Chr2:20212657-20212676 MsG0280007763.01.T01:intron 55.0%
AATACACCCCCCCTCACACC+CGG + Chr2:20214501-20214520 None:intergenic 60.0%
ACCTGGTCAAGCCTTGGCTG+AGG - Chr2:20213983-20214002 MsG0280007763.01.T01:CDS 60.0%
CGATCCACCTGGTCAAGCCT+TGG - Chr2:20213977-20213996 MsG0280007763.01.T01:CDS 60.0%
CGCTGAGCGGATGAGTTTGG+AGG - Chr2:20217216-20217235 MsG0280007763.01.T01:intron 60.0%
GCAGATGCTGGCGTGTCAGA+TGG - Chr2:20214751-20214770 MsG0280007763.01.T01:intron 60.0%
GTCAGACCGGCGATGCTGTA+TGG - Chr2:20212640-20212659 MsG0280007763.01.T01:intron 60.0%
TCAGCCAAGGCTTGACCAGG+TGG + Chr2:20213984-20214003 None:intergenic 60.0%
TCCTCAGCCAAGGCTTGACC+AGG + Chr2:20213987-20214006 None:intergenic 60.0%
TGCACTGTTCCCCCCAGCAA+AGG - Chr2:20216922-20216941 MsG0280007763.01.T01:intron 60.0%
! GAGGAGCTTGCACGCCGTTT+TGG - Chr2:20214002-20214021 MsG0280007763.01.T01:CDS 60.0%
! GCAACTGATGGCGATCCACC+TGG - Chr2:20213966-20213985 MsG0280007763.01.T01:CDS 60.0%
! GGTGTGAGGGGGGGTGTATT+GGG - Chr2:20214501-20214520 MsG0280007763.01.T01:CDS 60.0%
!! GGAGTTGCCACCTCTGGAAC+AGG - Chr2:20213639-20213658 MsG0280007763.01.T01:intron 60.0%
ACACCCGGCACTATGGGGCT+TGG + Chr2:20214486-20214505 None:intergenic 65.0%
CCACCAAGCCCCATAGTGCC+GGG - Chr2:20214480-20214499 MsG0280007763.01.T01:CDS 65.0%
CCCCTCACACCCGGCACTAT+GGG + Chr2:20214492-20214511 None:intergenic 65.0%
CCCTCACACCCGGCACTATG+GGG + Chr2:20214491-20214510 None:intergenic 65.0%
GCCACCAAGCCCCATAGTGC+CGG - Chr2:20214479-20214498 MsG0280007763.01.T01:CDS 65.0%
GCGTGCAAGCTCCTCAGCCA+AGG + Chr2:20213997-20214016 None:intergenic 65.0%
GCTACGCCGAAGACGCTGAG+CGG - Chr2:20217203-20217222 MsG0280007763.01.T01:intron 65.0%
! ACTGATGGAGGTGCGCCGTC+AGG + Chr2:20213610-20213629 None:intergenic 65.0%
! ATAGTGCCGGGTGTGAGGGG+GGG - Chr2:20214492-20214511 MsG0280007763.01.T01:CDS 65.0%
! CATAGTGCCGGGTGTGAGGG+GGG - Chr2:20214491-20214510 MsG0280007763.01.T01:CDS 65.0%
! CCATAGTGCCGGGTGTGAGG+GGG - Chr2:20214490-20214509 MsG0280007763.01.T01:CDS 65.0%
! CCCATAGTGCCGGGTGTGAG+GGG - Chr2:20214489-20214508 MsG0280007763.01.T01:CDS 65.0%
! CCCCATAGTGCCGGGTGTGA+GGG - Chr2:20214488-20214507 MsG0280007763.01.T01:CDS 65.0%
! GGGTGTGAGGGGGGGTGTAT+TGG - Chr2:20214500-20214519 MsG0280007763.01.T01:CDS 65.0%
CCCCCTCACACCCGGCACTA+TGG + Chr2:20214493-20214512 None:intergenic 70.0%
CCCGGCACTATGGGGCTTGG+TGG + Chr2:20214483-20214502 None:intergenic 70.0%
! GCCCCATAGTGCCGGGTGTG+AGG - Chr2:20214487-20214506 MsG0280007763.01.T01:CDS 70.0%
!! GGCTTGGTGGCCCGATCGAC+AGG + Chr2:20214470-20214489 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 20211988 20217291 20211988 ID=MsG0280007763.01;Name=MsG0280007763.01
Chr2 mRNA 20211988 20217291 20211988 ID=MsG0280007763.01.T01;Parent=MsG0280007763.01;Name=MsG0280007763.01.T01;_AED=0.48;_eAED=0.62;_QI=0|0.6|0.63|1|0.8|0.72|11|0|405
Chr2 exon 20217256 20217291 20217256 ID=MsG0280007763.01.T01:exon:10423;Parent=MsG0280007763.01.T01
Chr2 exon 20217086 20217167 20217086 ID=MsG0280007763.01.T01:exon:10422;Parent=MsG0280007763.01.T01
Chr2 exon 20216537 20216746 20216537 ID=MsG0280007763.01.T01:exon:10421;Parent=MsG0280007763.01.T01
Chr2 exon 20215816 20215976 20215816 ID=MsG0280007763.01.T01:exon:10420;Parent=MsG0280007763.01.T01
Chr2 exon 20215619 20215735 20215619 ID=MsG0280007763.01.T01:exon:10419;Parent=MsG0280007763.01.T01
Chr2 exon 20215246 20215331 20215246 ID=MsG0280007763.01.T01:exon:10418;Parent=MsG0280007763.01.T01
Chr2 exon 20214464 20214524 20214464 ID=MsG0280007763.01.T01:exon:10417;Parent=MsG0280007763.01.T01
Chr2 exon 20213904 20214086 20213904 ID=MsG0280007763.01.T01:exon:10416;Parent=MsG0280007763.01.T01
Chr2 exon 20213169 20213300 20213169 ID=MsG0280007763.01.T01:exon:10415;Parent=MsG0280007763.01.T01
Chr2 exon 20212537 20212598 20212537 ID=MsG0280007763.01.T01:exon:10414;Parent=MsG0280007763.01.T01
Chr2 exon 20211988 20212075 20211988 ID=MsG0280007763.01.T01:exon:10413;Parent=MsG0280007763.01.T01
Chr2 CDS 20217256 20217291 20217256 ID=MsG0280007763.01.T01:cds;Parent=MsG0280007763.01.T01
Chr2 CDS 20217086 20217167 20217086 ID=MsG0280007763.01.T01:cds;Parent=MsG0280007763.01.T01
Chr2 CDS 20216537 20216746 20216537 ID=MsG0280007763.01.T01:cds;Parent=MsG0280007763.01.T01
Chr2 CDS 20215816 20215976 20215816 ID=MsG0280007763.01.T01:cds;Parent=MsG0280007763.01.T01
Chr2 CDS 20215619 20215735 20215619 ID=MsG0280007763.01.T01:cds;Parent=MsG0280007763.01.T01
Chr2 CDS 20215246 20215331 20215246 ID=MsG0280007763.01.T01:cds;Parent=MsG0280007763.01.T01
Chr2 CDS 20214464 20214524 20214464 ID=MsG0280007763.01.T01:cds;Parent=MsG0280007763.01.T01
Chr2 CDS 20213904 20214086 20213904 ID=MsG0280007763.01.T01:cds;Parent=MsG0280007763.01.T01
Chr2 CDS 20213169 20213300 20213169 ID=MsG0280007763.01.T01:cds;Parent=MsG0280007763.01.T01
Chr2 CDS 20212537 20212598 20212537 ID=MsG0280007763.01.T01:cds;Parent=MsG0280007763.01.T01
Chr2 CDS 20211988 20212075 20211988 ID=MsG0280007763.01.T01:cds;Parent=MsG0280007763.01.T01
Gene Sequence

>MsG0280007763.01.T01

ATGCACAAGGGCTATGTGTCAATTTTATTTCTTACTATTGTTATTGCATTCACATATCGTCGTAATGGAGCGCTTATTAGTTTGCAAGTACAGAGACATCGACAAAAGGTTTTGGCAGATGTAAGCCATCGTATTCAAGGGGTGTTGAAATGGAGAAGAGCCTCAGGTGTTTTGTGCGATAAGAAAGTACCACTTAAGTTGAAAGGAAAGTTCTATCGGATAGCAGTCAGACCGGCGATGCTGTATGGTACGGAGTGTTGGGCGGTTAAGAGTCAACATGAGAATCAAGTAAGTGTAGCAGAGATGAGGATGTTGCGCTGGATGAGTGCATGCTGGAAGATAGTGTTACTCTTAATATCTTCTGTTCTTATAACTTTTTTTACATCTTTTTCCCTCATCATCATCATATTATTATTTTTGCAGGAAGCCGACACTGAAAAGATCTTTTATGGATTGGATGACATAGTTGGAGAAAGTGATGTTATCATTGTTGAAGGTGAAATGGACAAGCTAGCAATGGAAGAAGCTGGCTTCCGAAATTGTATTAGTGTTCCTGACGGCGCACCTCCATCAGTCTCTTCAAAGGAGTTGCCACCTCTGGAACAGGCATCCCGGATTATCCTTGCAACTGATGGCGATCCACCTGGTCAAGCCTTGGCTGAGGAGCTTGCACGCCGTTTTGGGAAAGAAAAATGCTGGCGTGTCAGATGGCCTAAAAAAGGGAAGACTGATGATTGCAAAGATGCAAATGAGGTTCTCATGTATTTGGGCCCCGATGCACTGAAAGAAGCGATTGAGAATGCAGAACTATATCCTATACGTGGATTGTTTAACTTCAGAGATTACTTTGACGAGCTTGACGCATATTATCATCGAACTTTGGGATATGACACTGGTCTCTCTACTGGCTGGAATAATCTGAATGGGTTATACAATATTGTGCCGGGAGAACTGACCATAGTAACTGGAGTTCCGAATTCAGGGAAGAGTGAGTGGATTGATGCTCTTCTTTGCAATCTTAATCAAAGTGCTGGCTGGAAATTTGCACTTTGTTCCATGGAGAATAAGGTTAGAGAACATGCTCGAAAACTTTTGGAGAAACATGTGAAAAAGCCTTTCTTTAATGATCGCTACGCCGAAGACGCTGAGCGGATGAGTTTGGAGGAATATGAAGAAGGCAAGCTCTGGTTAAATGATACTTTTTATCTCATAAGGTAA

Protein sequence

>MsG0280007763.01.T01

MHKGYVSILFLTIVIAFTYRRNGALISLQVQRHRQKVLADVSHRIQGVLKWRRASGVLCDKKVPLKLKGKFYRIAVRPAMLYGTECWAVKSQHENQVSVAEMRMLRWMSACWKIVLLLISSVLITFFTSFSLIIIILLFLQEADTEKIFYGLDDIVGESDVIIVEGEMDKLAMEEAGFRNCISVPDGAPPSVSSKELPPLEQASRIILATDGDPPGQALAEELARRFGKEKCWRVRWPKKGKTDDCKDANEVLMYLGPDALKEAIENAELYPIRGLFNFRDYFDELDAYYHRTLGYDTGLSTGWNNLNGLYNIVPGELTIVTGVPNSGKSEWIDALLCNLNQSAGWKFALCSMENKVREHARKLLEKHVKKPFFNDRYAEDAERMSLEEYEEGKLWLNDTFYLIR*