Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015520.01.T05 | XP_003600988.1 | 97.573 | 206 | 5 | 0 | 1 | 206 | 1 | 206 | 1.20E-144 | 414 |
MsG0380015520.01.T03 | XP_003600988.1 | 91.748 | 206 | 5 | 1 | 1 | 194 | 1 | 206 | 1.02E-131 | 380 |
MsG0380015520.01.T02 | XP_003600988.1 | 89.32 | 206 | 5 | 1 | 1 | 189 | 1 | 206 | 1.49E-127 | 370 |
MsG0380015520.01.T04 | XP_003600988.1 | 89.806 | 206 | 6 | 1 | 1 | 191 | 1 | 206 | 6.70E-119 | 348 |
MsG0380015520.01.T06 | XP_003600988.1 | 97.015 | 134 | 4 | 0 | 1 | 134 | 73 | 206 | 9.47E-89 | 269 |
MsG0380015520.01.T01 | XP_003600988.1 | 90.777 | 206 | 5 | 1 | 1 | 192 | 1 | 206 | 6.54E-120 | 351 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015520.01.T01 | Q9FLB1 | 65.517 | 145 | 50 | 0 | 44 | 188 | 37 | 181 | 3.47E-65 | 203 |
MsG0380015520.01.T02 | Q9FLB1 | 65.068 | 146 | 51 | 0 | 40 | 185 | 36 | 181 | 1.58E-64 | 202 |
MsG0380015520.01.T03 | Q8S8E3 | 55.612 | 196 | 76 | 3 | 1 | 191 | 1 | 190 | 8.25E-67 | 208 |
MsG0380015520.01.T04 | Q8S8E3 | 55.612 | 196 | 73 | 5 | 1 | 188 | 1 | 190 | 2.27E-65 | 204 |
MsG0380015520.01.T05 | Q9FLB1 | 65.278 | 144 | 50 | 0 | 59 | 202 | 38 | 181 | 3.70E-64 | 201 |
MsG0380015520.01.T06 | Q9FLB1 | 68.992 | 129 | 40 | 0 | 2 | 130 | 53 | 181 | 4.88E-61 | 191 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015520.01.T01 | G7J2D4 | 90.777 | 206 | 5 | 1 | 1 | 192 | 1 | 206 | 3.12e-120 | 351 |
MsG0380015520.01.T02 | G7J2D4 | 89.320 | 206 | 5 | 1 | 1 | 189 | 1 | 206 | 7.12e-128 | 370 |
MsG0380015520.01.T03 | G7J2D4 | 91.748 | 206 | 5 | 1 | 1 | 194 | 1 | 206 | 4.88e-132 | 380 |
MsG0380015520.01.T04 | G7J2D4 | 89.806 | 206 | 6 | 1 | 1 | 191 | 1 | 206 | 3.20e-119 | 348 |
MsG0380015520.01.T05 | G7J2D4 | 97.573 | 206 | 5 | 0 | 1 | 206 | 1 | 206 | 5.75e-145 | 414 |
MsG0380015520.01.T06 | G7J2D4 | 97.015 | 134 | 4 | 0 | 1 | 134 | 73 | 206 | 4.52e-89 | 269 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180006255.01 | MsG0380015520.01 | 0.821369 | 4.189018e-53 | 3.401409e-50 |
MsG0280010793.01 | MsG0380015520.01 | 0.829201 | 5.875874e-55 | 5.972857e-52 |
MsG0380015520.01 | MsG0480018569.01 | 0.813832 | 2.096213e-51 | 1.383590e-48 |
MsG0380015520.01 | MsG0580025558.01 | 0.829193 | 5.901942e-55 | 5.997767e-52 |
MsG0380015520.01 | MsG0580029237.01 | -0.802411 | 5.681453e-49 | 2.781246e-46 |
MsG0380015520.01 | MsG0680035696.01 | -0.811103 | 8.276926e-51 | 5.078390e-48 |
MsG0280008715.01 | MsG0380015520.01 | -0.801458 | 8.919656e-49 | 4.261792e-46 |
MsG0280008717.01 | MsG0380015520.01 | -0.809282 | 2.043970e-50 | 1.195111e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015520.01.T05 | MTR_3g071740 | 97.573 | 206 | 5 | 0 | 1 | 206 | 1 | 206 | 1.46e-148 | 414 |
MsG0380015520.01.T05 | MTR_5g083270 | 60.784 | 204 | 59 | 5 | 1 | 203 | 1 | 184 | 3.36e-74 | 224 |
MsG0380015520.01.T05 | MTR_7g070050 | 64.557 | 158 | 47 | 3 | 57 | 206 | 4 | 160 | 2.51e-58 | 183 |
MsG0380015520.01.T05 | MTR_4g014460 | 61.268 | 142 | 51 | 2 | 64 | 202 | 47 | 187 | 2.02e-56 | 179 |
MsG0380015520.01.T05 | MTR_5g030500 | 48.555 | 173 | 76 | 3 | 69 | 235 | 47 | 212 | 6.64e-53 | 171 |
MsG0380015520.01.T05 | MTR_1g016480 | 56.738 | 141 | 53 | 3 | 72 | 206 | 43 | 181 | 1.13e-49 | 162 |
MsG0380015520.01.T05 | MTR_3g090980 | 53.333 | 150 | 65 | 4 | 63 | 209 | 18 | 165 | 2.39e-49 | 161 |
MsG0380015520.01.T05 | MTR_1g028380 | 51.250 | 160 | 71 | 5 | 52 | 206 | 3 | 160 | 2.61e-49 | 160 |
MsG0380015520.01.T05 | MTR_8g027805 | 54.167 | 144 | 61 | 3 | 69 | 209 | 21 | 162 | 6.27e-49 | 159 |
MsG0380015520.01.T03 | MTR_3g071740 | 91.748 | 206 | 5 | 1 | 1 | 194 | 1 | 206 | 1.24e-135 | 380 |
MsG0380015520.01.T03 | MTR_5g083270 | 64.062 | 192 | 60 | 3 | 1 | 191 | 1 | 184 | 6.49e-76 | 228 |
MsG0380015520.01.T03 | MTR_7g070050 | 64.557 | 158 | 47 | 3 | 45 | 194 | 4 | 160 | 1.15e-58 | 184 |
MsG0380015520.01.T03 | MTR_4g014460 | 61.268 | 142 | 51 | 2 | 52 | 190 | 47 | 187 | 2.13e-56 | 179 |
MsG0380015520.01.T03 | MTR_5g030500 | 48.555 | 173 | 76 | 3 | 57 | 223 | 47 | 212 | 4.55e-53 | 171 |
MsG0380015520.01.T03 | MTR_1g016480 | 56.738 | 141 | 53 | 3 | 60 | 194 | 43 | 181 | 8.39e-50 | 162 |
MsG0380015520.01.T03 | MTR_3g090980 | 53.333 | 150 | 65 | 4 | 51 | 197 | 18 | 165 | 1.23e-49 | 161 |
MsG0380015520.01.T03 | MTR_1g028380 | 51.250 | 160 | 71 | 5 | 40 | 194 | 3 | 160 | 1.55e-49 | 160 |
MsG0380015520.01.T03 | MTR_8g027805 | 54.167 | 144 | 61 | 3 | 57 | 197 | 21 | 162 | 4.94e-49 | 159 |
MsG0380015520.01.T02 | MTR_3g071740 | 89.320 | 206 | 5 | 1 | 1 | 189 | 1 | 206 | 1.81e-131 | 370 |
MsG0380015520.01.T02 | MTR_5g083270 | 63.021 | 192 | 57 | 4 | 1 | 186 | 1 | 184 | 2.94e-73 | 221 |
MsG0380015520.01.T02 | MTR_7g070050 | 64.151 | 159 | 48 | 3 | 39 | 189 | 3 | 160 | 9.61e-59 | 184 |
MsG0380015520.01.T02 | MTR_4g014460 | 61.268 | 142 | 51 | 2 | 47 | 185 | 47 | 187 | 1.96e-56 | 179 |
MsG0380015520.01.T02 | MTR_5g030500 | 47.727 | 176 | 79 | 3 | 49 | 218 | 44 | 212 | 4.78e-53 | 170 |
MsG0380015520.01.T02 | MTR_1g016480 | 56.738 | 141 | 53 | 3 | 55 | 189 | 43 | 181 | 1.09e-49 | 161 |
MsG0380015520.01.T02 | MTR_3g090980 | 53.333 | 150 | 65 | 4 | 46 | 192 | 18 | 165 | 1.40e-49 | 161 |
MsG0380015520.01.T02 | MTR_8g027805 | 54.167 | 144 | 61 | 3 | 52 | 192 | 21 | 162 | 4.48e-49 | 159 |
MsG0380015520.01.T02 | MTR_1g028380 | 52.667 | 150 | 66 | 4 | 43 | 189 | 13 | 160 | 7.21e-49 | 159 |
MsG0380015520.01.T04 | MTR_3g071740 | 89.806 | 206 | 6 | 1 | 1 | 191 | 1 | 206 | 8.12e-123 | 348 |
MsG0380015520.01.T04 | MTR_5g083270 | 62.245 | 196 | 54 | 5 | 1 | 188 | 1 | 184 | 2.20e-74 | 224 |
MsG0380015520.01.T04 | MTR_4g014460 | 61.806 | 144 | 51 | 2 | 47 | 187 | 45 | 187 | 6.34e-58 | 183 |
MsG0380015520.01.T04 | MTR_7g070050 | 64.706 | 153 | 45 | 3 | 47 | 191 | 9 | 160 | 6.55e-58 | 182 |
MsG0380015520.01.T04 | MTR_5g030500 | 47.027 | 185 | 84 | 4 | 46 | 224 | 40 | 216 | 1.03e-53 | 172 |
MsG0380015520.01.T04 | MTR_1g016480 | 56.738 | 141 | 53 | 3 | 57 | 191 | 43 | 181 | 7.60e-50 | 162 |
MsG0380015520.01.T04 | MTR_3g090980 | 55.556 | 144 | 59 | 4 | 54 | 194 | 24 | 165 | 1.84e-49 | 160 |
MsG0380015520.01.T04 | MTR_8g027805 | 54.167 | 144 | 61 | 3 | 54 | 194 | 21 | 162 | 3.85e-49 | 159 |
MsG0380015520.01.T04 | MTR_1g028380 | 56.028 | 141 | 57 | 4 | 54 | 191 | 22 | 160 | 1.72e-48 | 158 |
MsG0380015520.01.T06 | MTR_3g071740 | 97.015 | 134 | 4 | 0 | 1 | 134 | 73 | 206 | 1.15e-92 | 269 |
MsG0380015520.01.T06 | MTR_5g083270 | 75.000 | 132 | 32 | 1 | 1 | 131 | 53 | 184 | 3.23e-63 | 194 |
MsG0380015520.01.T06 | MTR_7g070050 | 68.085 | 141 | 36 | 3 | 2 | 134 | 21 | 160 | 2.61e-55 | 173 |
MsG0380015520.01.T06 | MTR_4g014460 | 63.636 | 132 | 44 | 2 | 2 | 130 | 57 | 187 | 6.90e-54 | 170 |
MsG0380015520.01.T06 | MTR_5g030500 | 48.521 | 169 | 74 | 3 | 1 | 163 | 51 | 212 | 2.24e-51 | 164 |
MsG0380015520.01.T06 | MTR_1g016480 | 58.209 | 134 | 50 | 2 | 5 | 134 | 50 | 181 | 4.32e-50 | 160 |
MsG0380015520.01.T06 | MTR_3g090980 | 56.522 | 138 | 55 | 4 | 3 | 137 | 30 | 165 | 1.24e-48 | 156 |
MsG0380015520.01.T06 | MTR_1g028380 | 57.037 | 135 | 53 | 4 | 3 | 134 | 28 | 160 | 9.65e-48 | 154 |
MsG0380015520.01.T06 | MTR_8g027805 | 55.147 | 136 | 56 | 3 | 5 | 137 | 29 | 162 | 2.62e-47 | 153 |
MsG0380015520.01.T01 | MTR_3g071740 | 90.777 | 206 | 5 | 1 | 1 | 192 | 1 | 206 | 7.92e-124 | 351 |
MsG0380015520.01.T01 | MTR_5g083270 | 62.500 | 192 | 61 | 4 | 1 | 189 | 1 | 184 | 3.65e-73 | 221 |
MsG0380015520.01.T01 | MTR_7g070050 | 65.161 | 155 | 45 | 3 | 46 | 192 | 7 | 160 | 2.69e-58 | 183 |
MsG0380015520.01.T01 | MTR_4g014460 | 61.268 | 142 | 51 | 2 | 50 | 188 | 47 | 187 | 1.78e-56 | 179 |
MsG0380015520.01.T01 | MTR_5g030500 | 47.727 | 176 | 79 | 3 | 52 | 221 | 44 | 212 | 4.96e-53 | 171 |
MsG0380015520.01.T01 | MTR_1g016480 | 56.738 | 141 | 53 | 3 | 58 | 192 | 43 | 181 | 6.12e-50 | 162 |
MsG0380015520.01.T01 | MTR_3g090980 | 53.333 | 150 | 65 | 4 | 49 | 195 | 18 | 165 | 1.32e-49 | 161 |
MsG0380015520.01.T01 | MTR_1g028380 | 51.948 | 154 | 69 | 4 | 42 | 192 | 9 | 160 | 4.11e-49 | 159 |
MsG0380015520.01.T01 | MTR_8g027805 | 54.167 | 144 | 61 | 3 | 55 | 195 | 21 | 162 | 4.43e-49 | 159 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015520.01.T05 | AT5G05440 | 65.278 | 144 | 50 | 0 | 59 | 202 | 38 | 181 | 3.77e-65 | 201 |
MsG0380015520.01.T05 | AT2G40330 | 62.821 | 156 | 53 | 1 | 53 | 203 | 35 | 190 | 1.38e-64 | 200 |
MsG0380015520.01.T05 | AT2G38310 | 63.529 | 170 | 58 | 1 | 65 | 234 | 38 | 203 | 1.44e-60 | 190 |
MsG0380015520.01.T05 | AT4G27920 | 54.167 | 144 | 62 | 3 | 66 | 206 | 14 | 156 | 9.89e-50 | 161 |
MsG0380015520.01.T05 | AT1G01360 | 51.974 | 152 | 68 | 3 | 58 | 206 | 13 | 162 | 1.65e-49 | 161 |
MsG0380015520.01.T05 | AT5G53160 | 55.319 | 141 | 58 | 4 | 69 | 206 | 22 | 160 | 3.75e-49 | 160 |
MsG0380015520.01.T05 | AT2G26040 | 52.055 | 146 | 64 | 3 | 66 | 206 | 22 | 166 | 5.03e-48 | 157 |
MsG0380015520.01.T05 | AT4G01026 | 50.000 | 152 | 71 | 3 | 58 | 206 | 15 | 164 | 2.68e-47 | 156 |
MsG0380015520.01.T05 | AT4G17870 | 50.000 | 142 | 68 | 1 | 64 | 202 | 15 | 156 | 5.55e-46 | 152 |
MsG0380015520.01.T05 | AT1G73000 | 43.678 | 174 | 82 | 5 | 69 | 230 | 40 | 209 | 1.37e-42 | 144 |
MsG0380015520.01.T05 | AT5G46790 | 47.468 | 158 | 77 | 1 | 51 | 202 | 29 | 186 | 5.04e-38 | 132 |
MsG0380015520.01.T05 | AT5G46790 | 47.468 | 158 | 77 | 1 | 51 | 202 | 29 | 186 | 5.04e-38 | 132 |
MsG0380015520.01.T05 | AT5G45860 | 57.937 | 126 | 50 | 2 | 79 | 202 | 10 | 134 | 7.34e-38 | 130 |
MsG0380015520.01.T05 | AT5G45870 | 52.349 | 149 | 65 | 3 | 79 | 226 | 10 | 153 | 1.24e-35 | 124 |
MsG0380015520.01.T05 | AT5G53160 | 54.545 | 99 | 43 | 2 | 69 | 167 | 22 | 118 | 1.39e-32 | 117 |
MsG0380015520.01.T05 | AT4G18620 | 47.101 | 138 | 65 | 2 | 77 | 206 | 7 | 144 | 1.88e-28 | 106 |
MsG0380015520.01.T03 | AT2G40330 | 55.612 | 196 | 76 | 3 | 1 | 191 | 1 | 190 | 8.41e-68 | 208 |
MsG0380015520.01.T03 | AT5G05440 | 65.278 | 144 | 50 | 0 | 47 | 190 | 38 | 181 | 2.13e-65 | 202 |
MsG0380015520.01.T03 | AT2G38310 | 63.529 | 170 | 58 | 1 | 53 | 222 | 38 | 203 | 9.72e-61 | 190 |
MsG0380015520.01.T03 | AT4G27920 | 53.741 | 147 | 64 | 3 | 54 | 197 | 14 | 159 | 6.01e-50 | 162 |
MsG0380015520.01.T03 | AT1G01360 | 51.974 | 152 | 68 | 3 | 46 | 194 | 13 | 162 | 9.81e-50 | 161 |
MsG0380015520.01.T03 | AT5G53160 | 55.319 | 141 | 58 | 4 | 57 | 194 | 22 | 160 | 3.06e-49 | 160 |
MsG0380015520.01.T03 | AT2G26040 | 52.055 | 146 | 64 | 3 | 54 | 194 | 22 | 166 | 3.03e-48 | 157 |
MsG0380015520.01.T03 | AT4G01026 | 50.000 | 152 | 71 | 3 | 46 | 194 | 15 | 164 | 1.78e-47 | 156 |
MsG0380015520.01.T03 | AT4G17870 | 50.000 | 142 | 68 | 1 | 52 | 190 | 15 | 156 | 4.76e-46 | 152 |
MsG0380015520.01.T03 | AT1G73000 | 43.678 | 174 | 82 | 5 | 57 | 218 | 40 | 209 | 7.95e-43 | 144 |
MsG0380015520.01.T03 | AT5G46790 | 47.531 | 162 | 78 | 2 | 35 | 190 | 26 | 186 | 1.66e-38 | 133 |
MsG0380015520.01.T03 | AT5G46790 | 47.531 | 162 | 78 | 2 | 35 | 190 | 26 | 186 | 1.66e-38 | 133 |
MsG0380015520.01.T03 | AT5G45860 | 57.937 | 126 | 50 | 2 | 67 | 190 | 10 | 134 | 5.04e-38 | 130 |
MsG0380015520.01.T03 | AT5G45870 | 52.349 | 149 | 65 | 3 | 67 | 214 | 10 | 153 | 8.07e-36 | 124 |
MsG0380015520.01.T03 | AT5G53160 | 54.545 | 99 | 43 | 2 | 57 | 155 | 22 | 118 | 1.16e-32 | 116 |
MsG0380015520.01.T03 | AT4G18620 | 47.101 | 138 | 65 | 2 | 65 | 194 | 7 | 144 | 9.76e-29 | 106 |
MsG0380015520.01.T02 | AT5G05440 | 65.068 | 146 | 51 | 0 | 40 | 185 | 36 | 181 | 1.62e-65 | 202 |
MsG0380015520.01.T02 | AT2G40330 | 55.208 | 192 | 78 | 3 | 1 | 186 | 1 | 190 | 2.44e-65 | 202 |
MsG0380015520.01.T02 | AT2G38310 | 63.529 | 170 | 58 | 1 | 48 | 217 | 38 | 203 | 1.16e-60 | 189 |
MsG0380015520.01.T02 | AT4G27920 | 53.741 | 147 | 64 | 3 | 49 | 192 | 14 | 159 | 6.98e-50 | 161 |
MsG0380015520.01.T02 | AT1G01360 | 51.974 | 152 | 68 | 3 | 41 | 189 | 13 | 162 | 1.15e-49 | 161 |
MsG0380015520.01.T02 | AT5G53160 | 55.319 | 141 | 58 | 4 | 52 | 189 | 22 | 160 | 3.59e-49 | 159 |
MsG0380015520.01.T02 | AT2G26040 | 52.055 | 146 | 64 | 3 | 49 | 189 | 22 | 166 | 2.72e-48 | 157 |
MsG0380015520.01.T02 | AT4G01026 | 50.000 | 152 | 71 | 3 | 41 | 189 | 15 | 164 | 1.92e-47 | 156 |
MsG0380015520.01.T02 | AT4G17870 | 47.097 | 155 | 79 | 1 | 34 | 185 | 2 | 156 | 1.88e-46 | 153 |
MsG0380015520.01.T02 | AT1G73000 | 43.678 | 174 | 82 | 5 | 52 | 213 | 40 | 209 | 7.08e-43 | 144 |
MsG0380015520.01.T02 | AT5G45860 | 57.937 | 126 | 50 | 2 | 62 | 185 | 10 | 134 | 4.57e-38 | 130 |
MsG0380015520.01.T02 | AT5G46790 | 48.993 | 149 | 70 | 1 | 43 | 185 | 38 | 186 | 7.79e-38 | 132 |
MsG0380015520.01.T02 | AT5G46790 | 48.993 | 149 | 70 | 1 | 43 | 185 | 38 | 186 | 7.79e-38 | 132 |
MsG0380015520.01.T02 | AT5G45870 | 52.349 | 149 | 65 | 3 | 62 | 209 | 10 | 153 | 7.84e-36 | 124 |
MsG0380015520.01.T02 | AT5G53160 | 54.545 | 99 | 43 | 2 | 52 | 150 | 22 | 118 | 1.13e-32 | 116 |
MsG0380015520.01.T02 | AT4G18620 | 47.101 | 138 | 65 | 2 | 60 | 189 | 7 | 144 | 9.70e-29 | 106 |
MsG0380015520.01.T04 | AT2G40330 | 55.612 | 196 | 73 | 5 | 1 | 188 | 1 | 190 | 2.31e-66 | 204 |
MsG0380015520.01.T04 | AT5G05440 | 64.828 | 145 | 51 | 0 | 43 | 187 | 37 | 181 | 3.17e-66 | 204 |
MsG0380015520.01.T04 | AT2G38310 | 63.529 | 170 | 58 | 1 | 50 | 219 | 38 | 203 | 9.15e-61 | 190 |
MsG0380015520.01.T04 | AT4G27920 | 54.861 | 144 | 61 | 3 | 54 | 194 | 17 | 159 | 6.54e-50 | 161 |
MsG0380015520.01.T04 | AT5G53160 | 55.319 | 141 | 58 | 4 | 54 | 191 | 22 | 160 | 3.09e-49 | 160 |
MsG0380015520.01.T04 | AT1G01360 | 54.610 | 141 | 59 | 3 | 54 | 191 | 24 | 162 | 5.62e-49 | 159 |
MsG0380015520.01.T04 | AT2G26040 | 52.055 | 146 | 64 | 3 | 51 | 191 | 22 | 166 | 2.90e-48 | 157 |
MsG0380015520.01.T04 | AT4G01026 | 51.333 | 150 | 68 | 3 | 45 | 191 | 17 | 164 | 8.36e-48 | 157 |
MsG0380015520.01.T04 | AT4G17870 | 48.344 | 151 | 75 | 1 | 40 | 187 | 6 | 156 | 1.60e-46 | 153 |
MsG0380015520.01.T04 | AT1G73000 | 43.678 | 174 | 82 | 5 | 54 | 215 | 40 | 209 | 7.07e-43 | 144 |
MsG0380015520.01.T04 | AT5G45860 | 57.937 | 126 | 50 | 2 | 64 | 187 | 10 | 134 | 3.29e-38 | 130 |
MsG0380015520.01.T04 | AT5G46790 | 48.980 | 147 | 69 | 1 | 47 | 187 | 40 | 186 | 9.52e-38 | 131 |
MsG0380015520.01.T04 | AT5G46790 | 48.980 | 147 | 69 | 1 | 47 | 187 | 40 | 186 | 9.52e-38 | 131 |
MsG0380015520.01.T04 | AT5G45870 | 52.349 | 149 | 65 | 3 | 64 | 211 | 10 | 153 | 6.42e-36 | 125 |
MsG0380015520.01.T04 | AT5G53160 | 54.545 | 99 | 43 | 2 | 54 | 152 | 22 | 118 | 1.17e-32 | 116 |
MsG0380015520.01.T04 | AT4G18620 | 47.101 | 138 | 65 | 2 | 62 | 191 | 7 | 144 | 1.13e-28 | 106 |
MsG0380015520.01.T06 | AT5G05440 | 68.992 | 129 | 40 | 0 | 2 | 130 | 53 | 181 | 4.98e-62 | 191 |
MsG0380015520.01.T06 | AT2G40330 | 67.647 | 136 | 39 | 1 | 1 | 131 | 55 | 190 | 6.15e-62 | 191 |
MsG0380015520.01.T06 | AT2G38310 | 76.154 | 130 | 31 | 0 | 2 | 131 | 47 | 176 | 7.99e-60 | 185 |
MsG0380015520.01.T06 | AT2G26040 | 55.147 | 136 | 55 | 3 | 4 | 134 | 32 | 166 | 1.21e-48 | 156 |
MsG0380015520.01.T06 | AT4G27920 | 55.882 | 136 | 56 | 3 | 5 | 137 | 25 | 159 | 4.96e-48 | 154 |
MsG0380015520.01.T06 | AT5G53160 | 55.882 | 136 | 55 | 4 | 5 | 137 | 30 | 163 | 3.75e-47 | 152 |
MsG0380015520.01.T06 | AT1G01360 | 55.147 | 136 | 56 | 3 | 5 | 137 | 32 | 165 | 5.69e-47 | 152 |
MsG0380015520.01.T06 | AT4G17870 | 52.632 | 133 | 60 | 1 | 1 | 130 | 24 | 156 | 2.15e-45 | 148 |
MsG0380015520.01.T06 | AT4G01026 | 53.383 | 133 | 57 | 3 | 5 | 134 | 34 | 164 | 3.84e-45 | 148 |
MsG0380015520.01.T06 | AT1G73000 | 44.048 | 168 | 78 | 5 | 3 | 158 | 46 | 209 | 1.94e-42 | 141 |
MsG0380015520.01.T06 | AT5G45860 | 57.937 | 126 | 50 | 2 | 7 | 130 | 10 | 134 | 8.62e-39 | 130 |
MsG0380015520.01.T06 | AT5G46790 | 52.206 | 136 | 59 | 1 | 1 | 130 | 51 | 186 | 5.85e-37 | 127 |
MsG0380015520.01.T06 | AT5G46790 | 52.206 | 136 | 59 | 1 | 1 | 130 | 51 | 186 | 5.85e-37 | 127 |
MsG0380015520.01.T06 | AT5G45870 | 52.349 | 149 | 65 | 3 | 7 | 154 | 10 | 153 | 9.36e-37 | 125 |
MsG0380015520.01.T06 | AT5G53160 | 56.044 | 91 | 38 | 2 | 5 | 95 | 30 | 118 | 1.12e-30 | 109 |
MsG0380015520.01.T06 | AT4G18620 | 47.101 | 138 | 65 | 2 | 5 | 134 | 7 | 144 | 1.63e-29 | 107 |
MsG0380015520.01.T01 | AT5G05440 | 65.517 | 145 | 50 | 0 | 44 | 188 | 37 | 181 | 3.54e-66 | 203 |
MsG0380015520.01.T01 | AT2G40330 | 55.612 | 196 | 74 | 4 | 1 | 189 | 1 | 190 | 5.79e-66 | 203 |
MsG0380015520.01.T01 | AT2G38310 | 63.529 | 170 | 58 | 1 | 51 | 220 | 38 | 203 | 9.17e-61 | 190 |
MsG0380015520.01.T01 | AT4G27920 | 55.319 | 141 | 59 | 3 | 55 | 192 | 17 | 156 | 6.99e-50 | 161 |
MsG0380015520.01.T01 | AT1G01360 | 51.282 | 156 | 71 | 3 | 40 | 192 | 9 | 162 | 2.24e-49 | 160 |
MsG0380015520.01.T01 | AT5G53160 | 55.319 | 141 | 58 | 4 | 55 | 192 | 22 | 160 | 2.86e-49 | 160 |
MsG0380015520.01.T01 | AT2G26040 | 52.055 | 146 | 64 | 3 | 52 | 192 | 22 | 166 | 2.81e-48 | 157 |
MsG0380015520.01.T01 | AT4G01026 | 51.316 | 152 | 68 | 4 | 45 | 192 | 15 | 164 | 5.80e-47 | 155 |
MsG0380015520.01.T01 | AT4G17870 | 50.000 | 142 | 68 | 1 | 50 | 188 | 15 | 156 | 3.71e-46 | 152 |
MsG0380015520.01.T01 | AT1G73000 | 43.678 | 174 | 82 | 5 | 55 | 216 | 40 | 209 | 6.77e-43 | 144 |
MsG0380015520.01.T01 | AT5G45860 | 57.937 | 126 | 50 | 2 | 65 | 188 | 10 | 134 | 4.31e-38 | 130 |
MsG0380015520.01.T01 | AT5G46790 | 48.993 | 149 | 70 | 1 | 46 | 188 | 38 | 186 | 8.00e-38 | 132 |
MsG0380015520.01.T01 | AT5G46790 | 48.993 | 149 | 70 | 1 | 46 | 188 | 38 | 186 | 8.00e-38 | 132 |
MsG0380015520.01.T01 | AT5G45870 | 52.349 | 149 | 65 | 3 | 65 | 212 | 10 | 153 | 7.44e-36 | 125 |
MsG0380015520.01.T01 | AT5G53160 | 54.545 | 99 | 43 | 2 | 55 | 153 | 22 | 118 | 1.06e-32 | 116 |
MsG0380015520.01.T01 | AT4G18620 | 47.101 | 138 | 65 | 2 | 63 | 192 | 7 | 144 | 9.65e-29 | 106 |
Find 77 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTGAAGTTCGTGTTGTTTC+AGG | 0.146453 | 3:-71343000 | MsG0380015520.01.T02:CDS |
CAGCCTGTATTGGGAATTTA+TGG | 0.240992 | 3:-71342564 | MsG0380015520.01.T02:three_prime_UTR |
TTGTTTCTAAATATGGGTTA+TGG | 0.308672 | 3:-71342617 | MsG0380015520.01.T02:three_prime_UTR |
GAAGATAAAGATGGTGGAAA+TGG | 0.328183 | 3:+71343240 | None:intergenic |
GGTGGTGTTTGTGGTTGTCT+AGG | 0.342795 | 3:+71343291 | None:intergenic |
ACAGGCCATACGGCGGAGAT+AGG | 0.366876 | 3:+71343114 | None:intergenic |
ACATAGATGCCAGCCTGTAT+TGG | 0.369377 | 3:-71342574 | MsG0380015520.01.T02:three_prime_UTR |
GGATGGGTAGATTAGATAGT+AGG | 0.371254 | 3:-71342543 | MsG0380015520.01.T02:three_prime_UTR |
ACCACAAACACCACCACCCA+CGG | 0.385777 | 3:-71343283 | MsG0380015520.01.T02:intron |
CATAGATGCCAGCCTGTATT+GGG | 0.400206 | 3:-71342573 | MsG0380015520.01.T02:three_prime_UTR |
TAAGTGGTTGCATCAGTTGT+AGG | 0.402894 | 3:+71343342 | None:intergenic |
TTCATTCACTCGACGGAGAT+AGG | 0.405446 | 3:-71342858 | MsG0380015520.01.T02:CDS |
CTTTCAGTGCTTGACTCAGC+TGG | 0.432971 | 3:+71342973 | None:intergenic |
CGACGCGCCGCCGTGGGTGG+TGG | 0.441588 | 3:+71343273 | None:intergenic |
ACGACGGAGCAGCACTGGTT+TGG | 0.446028 | 3:+71343156 | None:intergenic |
GTGGTGTTTGTGGTTGTCTA+GGG | 0.450968 | 3:+71343292 | None:intergenic |
GTCATCAGCTTCAGTGTTGT+TGG | 0.454648 | 3:-71342922 | MsG0380015520.01.T02:CDS |
AAGATAAAGATGGTGGAAAT+GGG | 0.456358 | 3:+71343241 | None:intergenic |
TCAGCTTCAGTGTTGTTGGT+GGG | 0.460835 | 3:-71342918 | MsG0380015520.01.T02:CDS |
TATGTATATATGATGTATAA+TGG | 0.462975 | 3:-71342479 | MsG0380015520.01.T02:three_prime_UTR |
CGTTGTAATTTACAGTCGTT+GGG | 0.475281 | 3:-71342752 | MsG0380015520.01.T02:CDS |
CATCCATAAATTCCCAATAC+AGG | 0.481627 | 3:+71342561 | None:intergenic |
GAGATAACGTGTCTAGGACT+AGG | 0.483808 | 3:+71343202 | None:intergenic |
ACGTTGTAATTTACAGTCGT+TGG | 0.493660 | 3:-71342753 | MsG0380015520.01.T02:CDS |
TGAGTCAAGCACTGAAAGGC+TGG | 0.494711 | 3:-71342968 | MsG0380015520.01.T02:CDS |
GTGTGACGACGGAGCAGCAC+TGG | 0.495331 | 3:+71343151 | None:intergenic |
GATGGGTAGATTAGATAGTA+GGG | 0.496156 | 3:-71342542 | MsG0380015520.01.T02:three_prime_UTR |
CTGTATTGGGAATTTATGGA+TGG | 0.497299 | 3:-71342560 | MsG0380015520.01.T02:three_prime_UTR |
GGCGGAGATAGGGGCGGAGA+TGG | 0.499951 | 3:+71343125 | None:intergenic |
CAGGCCATACGGCGGAGATA+GGG | 0.510475 | 3:+71343115 | None:intergenic |
GTTTGCTATGGCTAAGTAAG+TGG | 0.511458 | 3:+71343326 | None:intergenic |
TAGGACTAGGGTTCCTCCGT+TGG | 0.513644 | 3:+71343215 | None:intergenic |
ATCAGCTTCAGTGTTGTTGG+TGG | 0.514963 | 3:-71342919 | MsG0380015520.01.T02:CDS |
AAGTGGTTGCATCAGTTGTA+GGG | 0.519210 | 3:+71343343 | None:intergenic |
GCAGTTTGCACCGTTTGCTA+TGG | 0.520707 | 3:+71343314 | None:intergenic |
GTTCCTTCATGATTATTGCT+CGG | 0.532104 | 3:+71342697 | None:intergenic |
AACTAAACGACGCGCCGCCG+TGG | 0.533995 | 3:+71343266 | None:intergenic |
CAGCTTCAGTGTTGTTGGTG+GGG | 0.536200 | 3:-71342917 | MsG0380015520.01.T02:CDS |
AGATAACGTGTCTAGGACTA+GGG | 0.537277 | 3:+71343203 | None:intergenic |
AGGCCATACGGCGGAGATAG+GGG | 0.537578 | 3:+71343116 | None:intergenic |
AAAAGCTGCCATGTCATCAC+CGG | 0.551768 | 3:-71343048 | MsG0380015520.01.T02:CDS |
CCATCTTTATCTTCTTCCAA+CGG | 0.556960 | 3:-71343231 | MsG0380015520.01.T02:intron |
CATAAATTCCCAATACAGGC+TGG | 0.558649 | 3:+71342565 | None:intergenic |
CCGCCCCTATCTCCGCCGTA+TGG | 0.564976 | 3:-71343119 | MsG0380015520.01.T02:CDS |
CTTCACCACGCACACATGGT+TGG | 0.565295 | 3:-71343180 | MsG0380015520.01.T02:CDS |
AACTTCACGAACAGCGCCGA+CGG | 0.566383 | 3:+71343014 | None:intergenic |
GCGTCGAACTACAGGCCATA+CGG | 0.566857 | 3:+71343104 | None:intergenic |
CAGCTGAGTCAAGCACTGAA+AGG | 0.571420 | 3:-71342972 | MsG0380015520.01.T02:CDS |
GGTGAAGAGATAACGTGTCT+AGG | 0.573419 | 3:+71343196 | None:intergenic |
AATGAAGCGTCGTCACCGAC+CGG | 0.581297 | 3:+71342875 | None:intergenic |
GCCGTGGGTGGTGGTGTTTG+TGG | 0.587797 | 3:+71343282 | None:intergenic |
ATCTCTTCACCACGCACACA+TGG | 0.590375 | 3:-71343184 | MsG0380015520.01.T02:CDS |
ACTTACTTAGCCATAGCAAA+CGG | 0.594361 | 3:-71343324 | MsG0380015520.01.T02:CDS |
ACTAAACGACGCGCCGCCGT+GGG | 0.595821 | 3:+71343267 | None:intergenic |
TCCTCCTTCGTGTTACCTTG+CGG | 0.597704 | 3:+71342802 | None:intergenic |
ACTCCGAGCAATAATCATGA+AGG | 0.600374 | 3:-71342700 | MsG0380015520.01.T02:CDS |
AAACGACGCGCCGCCGTGGG+TGG | 0.603918 | 3:+71343270 | None:intergenic |
TGTATTGGGAATTTATGGAT+GGG | 0.609874 | 3:-71342559 | MsG0380015520.01.T02:three_prime_UTR |
ACCGGTAGTTTCTCAGACGG+TGG | 0.613294 | 3:+71342893 | None:intergenic |
TTGGAAGAAGATAAAGATGG+TGG | 0.620854 | 3:+71343234 | None:intergenic |
TCTTTATCTTCTTCCAACGG+AGG | 0.632116 | 3:-71343228 | MsG0380015520.01.T02:intron |
CCATACGGCGGAGATAGGGG+CGG | 0.649626 | 3:+71343119 | None:intergenic |
ACCGGAGAAAACATCACCGT+CGG | 0.653865 | 3:-71343030 | MsG0380015520.01.T02:CDS |
TACGTCGTTGACGTACCGCA+AGG | 0.658251 | 3:-71342817 | MsG0380015520.01.T02:CDS |
TTGGTCCAACCATGTGTGCG+TGG | 0.662505 | 3:+71343175 | None:intergenic |
CCGTTGGAAGAAGATAAAGA+TGG | 0.665346 | 3:+71343231 | None:intergenic |
ACCGCAAGGTAACACGAAGG+AGG | 0.666880 | 3:-71342803 | MsG0380015520.01.T02:CDS |
ATTTATGTCACTAAATGATG+TGG | 0.674422 | 3:-71342440 | MsG0380015520.01.T02:three_prime_UTR |
ACCACCGTCTGAGAAACTAC+CGG | 0.679568 | 3:-71342894 | MsG0380015520.01.T02:CDS |
CGACGCTTCGAAAATCCACA+AGG | 0.680557 | 3:-71343087 | MsG0380015520.01.T02:CDS |
ACAAACACCACCACCCACGG+CGG | 0.682673 | 3:-71343280 | MsG0380015520.01.T02:intron |
ACGACGCTTCATTCACTCGA+CGG | 0.685079 | 3:-71342865 | MsG0380015520.01.T02:CDS |
GGAGATGGTTTGTGTGACGA+CGG | 0.685568 | 3:+71343140 | None:intergenic |
CCGACCGGTAGTTTCTCAGA+CGG | 0.717412 | 3:+71342890 | None:intergenic |
TCGAACTACAGGCCATACGG+CGG | 0.723216 | 3:+71343107 | None:intergenic |
CCGTCTGAGAAACTACCGGT+CGG | 0.737535 | 3:-71342890 | MsG0380015520.01.T02:CDS |
CGTACCGCAAGGTAACACGA+AGG | 0.792249 | 3:-71342806 | MsG0380015520.01.T02:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATGTATATATGATGTATAA+TGG | - | Chr3:71343337-71343356 | MsG0380015520.01.T02:CDS | 15.0% |
!!! | GTGTTTTTGTTTCTAAATAT+GGG | - | Chr3:71343193-71343212 | MsG0380015520.01.T02:CDS | 20.0% |
!!! | TGTGTTTTTGTTTCTAAATA+TGG | - | Chr3:71343192-71343211 | MsG0380015520.01.T02:CDS | 20.0% |
! | ATTTATGTCACTAAATGATG+TGG | - | Chr3:71343376-71343395 | MsG0380015520.01.T02:CDS | 25.0% |
!!! | TTGTTTCTAAATATGGGTTA+TGG | - | Chr3:71343199-71343218 | MsG0380015520.01.T02:CDS | 25.0% |
TGTATTGGGAATTTATGGAT+GGG | - | Chr3:71343257-71343276 | MsG0380015520.01.T02:intron | 30.0% | |
!! | AAGATAAAGATGGTGGAAAT+GGG | + | Chr3:71342578-71342597 | None:intergenic | 30.0% |
ACGTTGTAATTTACAGTCGT+TGG | - | Chr3:71343063-71343082 | MsG0380015520.01.T02:CDS | 35.0% | |
ACTTACTTAGCCATAGCAAA+CGG | - | Chr3:71342492-71342511 | MsG0380015520.01.T02:three_prime_UTR | 35.0% | |
AGCTGAAGAGAAAAACTTGA+TGG | + | Chr3:71342441-71342460 | None:intergenic | 35.0% | |
CATCCATAAATTCCCAATAC+AGG | + | Chr3:71343258-71343277 | None:intergenic | 35.0% | |
CCATCTTTATCTTCTTCCAA+CGG | - | Chr3:71342585-71342604 | MsG0380015520.01.T02:three_prime_UTR | 35.0% | |
CGTTGTAATTTACAGTCGTT+GGG | - | Chr3:71343064-71343083 | MsG0380015520.01.T02:CDS | 35.0% | |
CTGTATTGGGAATTTATGGA+TGG | - | Chr3:71343256-71343275 | MsG0380015520.01.T02:intron | 35.0% | |
GATGGGTAGATTAGATAGTA+GGG | - | Chr3:71343274-71343293 | MsG0380015520.01.T02:intron | 35.0% | |
GTTCCTTCATGATTATTGCT+CGG | + | Chr3:71343122-71343141 | None:intergenic | 35.0% | |
TTGGAAGAAGATAAAGATGG+TGG | + | Chr3:71342585-71342604 | None:intergenic | 35.0% | |
! | ACGAAGTTTTTGTATCCTTG+TGG | + | Chr3:71342747-71342766 | None:intergenic | 35.0% |
!! | GAAGATAAAGATGGTGGAAA+TGG | + | Chr3:71342579-71342598 | None:intergenic | 35.0% |
!!! | TAGTAGGGCTTTTTTTCTGA+TGG | - | Chr3:71343289-71343308 | MsG0380015520.01.T02:CDS | 35.0% |
AAGTGGTTGCATCAGTTGTA+GGG | + | Chr3:71342476-71342495 | None:intergenic | 40.0% | |
ACTCCGAGCAATAATCATGA+AGG | - | Chr3:71343116-71343135 | MsG0380015520.01.T02:CDS | 40.0% | |
CAGCCTGTATTGGGAATTTA+TGG | - | Chr3:71343252-71343271 | MsG0380015520.01.T02:intron | 40.0% | |
CATAAATTCCCAATACAGGC+TGG | + | Chr3:71343254-71343273 | None:intergenic | 40.0% | |
CCGTTGGAAGAAGATAAAGA+TGG | + | Chr3:71342588-71342607 | None:intergenic | 40.0% | |
GGATGGGTAGATTAGATAGT+AGG | - | Chr3:71343273-71343292 | MsG0380015520.01.T02:intron | 40.0% | |
TAAGTGGTTGCATCAGTTGT+AGG | + | Chr3:71342477-71342496 | None:intergenic | 40.0% | |
TCTTTATCTTCTTCCAACGG+AGG | - | Chr3:71342588-71342607 | MsG0380015520.01.T02:three_prime_UTR | 40.0% | |
! | AGATAACGTGTCTAGGACTA+GGG | + | Chr3:71342616-71342635 | None:intergenic | 40.0% |
!! | GTTTGCTATGGCTAAGTAAG+TGG | + | Chr3:71342493-71342512 | None:intergenic | 40.0% |
AAAAGCTGCCATGTCATCAC+CGG | - | Chr3:71342768-71342787 | MsG0380015520.01.T02:CDS | 45.0% | |
ACATAGATGCCAGCCTGTAT+TGG | - | Chr3:71343242-71343261 | MsG0380015520.01.T02:intron | 45.0% | |
CATAGATGCCAGCCTGTATT+GGG | - | Chr3:71343243-71343262 | MsG0380015520.01.T02:intron | 45.0% | |
GGTGAAGAGATAACGTGTCT+AGG | + | Chr3:71342623-71342642 | None:intergenic | 45.0% | |
GTCATCAGCTTCAGTGTTGT+TGG | - | Chr3:71342894-71342913 | MsG0380015520.01.T02:CDS | 45.0% | |
GTGGTGTTTGTGGTTGTCTA+GGG | + | Chr3:71342527-71342546 | None:intergenic | 45.0% | |
TTCATTCACTCGACGGAGAT+AGG | - | Chr3:71342958-71342977 | MsG0380015520.01.T02:CDS | 45.0% | |
! | ATCAGCTTCAGTGTTGTTGG+TGG | - | Chr3:71342897-71342916 | MsG0380015520.01.T02:CDS | 45.0% |
! | GAGATAACGTGTCTAGGACT+AGG | + | Chr3:71342617-71342636 | None:intergenic | 45.0% |
! | TCAGCTTCAGTGTTGTTGGT+GGG | - | Chr3:71342898-71342917 | MsG0380015520.01.T02:CDS | 45.0% |
! | TGTTTTCTCCGGTGATGACA+TGG | + | Chr3:71342779-71342798 | None:intergenic | 45.0% |
!! | CGTGAAGTTCGTGTTGTTTC+AGG | - | Chr3:71342816-71342835 | MsG0380015520.01.T02:CDS | 45.0% |
!!! | TTTTCGAAGCGTCGAACTAC+AGG | + | Chr3:71342723-71342742 | None:intergenic | 45.0% |
!!! | TTTATTGTTTTTAATAATTT+GGG | - | Chr3:71343168-71343187 | MsG0380015520.01.T02:CDS | 5.0% |
!!! | TTTTATTGTTTTTAATAATT+TGG | - | Chr3:71343167-71343186 | MsG0380015520.01.T02:CDS | 5.0% |
ACCACCGTCTGAGAAACTAC+CGG | - | Chr3:71342922-71342941 | MsG0380015520.01.T02:CDS | 50.0% | |
ACCGGAGAAAACATCACCGT+CGG | - | Chr3:71342786-71342805 | MsG0380015520.01.T02:CDS | 50.0% | |
ACGACGCTTCATTCACTCGA+CGG | - | Chr3:71342951-71342970 | MsG0380015520.01.T02:CDS | 50.0% | |
ATCTCTTCACCACGCACACA+TGG | - | Chr3:71342632-71342651 | MsG0380015520.01.T02:three_prime_UTR | 50.0% | |
CGACGCTTCGAAAATCCACA+AGG | - | Chr3:71342729-71342748 | MsG0380015520.01.T02:CDS | 50.0% | |
CTTTCAGTGCTTGACTCAGC+TGG | + | Chr3:71342846-71342865 | None:intergenic | 50.0% | |
GGTGGTGTTTGTGGTTGTCT+AGG | + | Chr3:71342528-71342547 | None:intergenic | 50.0% | |
TCCTCCTTCGTGTTACCTTG+CGG | + | Chr3:71343017-71343036 | None:intergenic | 50.0% | |
! | CAGCTTCAGTGTTGTTGGTG+GGG | - | Chr3:71342899-71342918 | MsG0380015520.01.T02:CDS | 50.0% |
! | GCAGTTTGCACCGTTTGCTA+TGG | + | Chr3:71342505-71342524 | None:intergenic | 50.0% |
! | GGAGATGGTTTGTGTGACGA+CGG | + | Chr3:71342679-71342698 | None:intergenic | 50.0% |
!! | CAGCTGAGTCAAGCACTGAA+AGG | - | Chr3:71342844-71342863 | MsG0380015520.01.T02:CDS | 50.0% |
!! | TGAGTCAAGCACTGAAAGGC+TGG | - | Chr3:71342848-71342867 | MsG0380015520.01.T02:CDS | 50.0% |
ACCACAAACACCACCACCCA+CGG | - | Chr3:71342533-71342552 | MsG0380015520.01.T02:three_prime_UTR | 55.0% | |
ACCGCAAGGTAACACGAAGG+AGG | - | Chr3:71343013-71343032 | MsG0380015520.01.T02:CDS | 55.0% | |
ACCGGTAGTTTCTCAGACGG+TGG | + | Chr3:71342926-71342945 | None:intergenic | 55.0% | |
CCGACCGGTAGTTTCTCAGA+CGG | + | Chr3:71342929-71342948 | None:intergenic | 55.0% | |
CCGTCTGAGAAACTACCGGT+CGG | - | Chr3:71342926-71342945 | MsG0380015520.01.T02:CDS | 55.0% | |
CGTACCGCAAGGTAACACGA+AGG | - | Chr3:71343010-71343029 | MsG0380015520.01.T02:CDS | 55.0% | |
CTTCACCACGCACACATGGT+TGG | - | Chr3:71342636-71342655 | MsG0380015520.01.T02:three_prime_UTR | 55.0% | |
GCGTCGAACTACAGGCCATA+CGG | + | Chr3:71342715-71342734 | None:intergenic | 55.0% | |
TACGTCGTTGACGTACCGCA+AGG | - | Chr3:71342999-71343018 | MsG0380015520.01.T02:CDS | 55.0% | |
TAGGACTAGGGTTCCTCCGT+TGG | + | Chr3:71342604-71342623 | None:intergenic | 55.0% | |
TCGAACTACAGGCCATACGG+CGG | + | Chr3:71342712-71342731 | None:intergenic | 55.0% | |
TTGGTCCAACCATGTGTGCG+TGG | + | Chr3:71342644-71342663 | None:intergenic | 55.0% | |
! | AACTTCACGAACAGCGCCGA+CGG | + | Chr3:71342805-71342824 | None:intergenic | 55.0% |
! | GCCGACGGTGATGTTTTCTC+CGG | + | Chr3:71342790-71342809 | None:intergenic | 55.0% |
!! | AATGAAGCGTCGTCACCGAC+CGG | + | Chr3:71342944-71342963 | None:intergenic | 55.0% |
ACAAACACCACCACCCACGG+CGG | - | Chr3:71342536-71342555 | MsG0380015520.01.T02:three_prime_UTR | 60.0% | |
ACAGGCCATACGGCGGAGAT+AGG | + | Chr3:71342705-71342724 | None:intergenic | 60.0% | |
AGGCCATACGGCGGAGATAG+GGG | + | Chr3:71342703-71342722 | None:intergenic | 60.0% | |
CAGGCCATACGGCGGAGATA+GGG | + | Chr3:71342704-71342723 | None:intergenic | 60.0% | |
!! | ACGACGGAGCAGCACTGGTT+TGG | + | Chr3:71342663-71342682 | None:intergenic | 60.0% |
AACTAAACGACGCGCCGCCG+TGG | + | Chr3:71342553-71342572 | None:intergenic | 65.0% | |
ACTAAACGACGCGCCGCCGT+GGG | + | Chr3:71342552-71342571 | None:intergenic | 65.0% | |
CCATACGGCGGAGATAGGGG+CGG | + | Chr3:71342700-71342719 | None:intergenic | 65.0% | |
GTGTGACGACGGAGCAGCAC+TGG | + | Chr3:71342668-71342687 | None:intergenic | 65.0% | |
! | GCCGTGGGTGGTGGTGTTTG+TGG | + | Chr3:71342537-71342556 | None:intergenic | 65.0% |
CCGCCCCTATCTCCGCCGTA+TGG | - | Chr3:71342697-71342716 | MsG0380015520.01.T02:CDS | 70.0% | |
GGCGGAGATAGGGGCGGAGA+TGG | + | Chr3:71342694-71342713 | None:intergenic | 70.0% | |
AAACGACGCGCCGCCGTGGG+TGG | + | Chr3:71342549-71342568 | None:intergenic | 75.0% | |
! | CGACGCGCCGCCGTGGGTGG+TGG | + | Chr3:71342546-71342565 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 71342435 | 71343403 | 71342435 | ID=MsG0380015520.01;Name=MsG0380015520.01 |
Chr3 | mRNA | 71342435 | 71343403 | 71342435 | ID=MsG0380015520.01.T01;Parent=MsG0380015520.01;Name=MsG0380015520.01.T01;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|0|0|2|222|234 |
Chr3 | exon | 71342435 | 71343230 | 71342435 | ID=MsG0380015520.01.T01:exon:23807;Parent=MsG0380015520.01.T01 |
Chr3 | exon | 71343273 | 71343403 | 71343273 | ID=MsG0380015520.01.T01:exon:23806;Parent=MsG0380015520.01.T01 |
Chr3 | CDS | 71343273 | 71343403 | 71343273 | ID=MsG0380015520.01.T01:cds;Parent=MsG0380015520.01.T01 |
Chr3 | CDS | 71342657 | 71343230 | 71342657 | ID=MsG0380015520.01.T01:cds;Parent=MsG0380015520.01.T01 |
Chr3 | three_prime_UTR | 71342435 | 71342656 | 71342435 | ID=MsG0380015520.01.T01:three_prime_utr;Parent=MsG0380015520.01.T01 |
Chr3 | mRNA | 71342435 | 71343403 | 71342435 | ID=MsG0380015520.01.T02;Parent=MsG0380015520.01;Name=MsG0380015520.01.T02;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|0|0|2|222|231 |
Chr3 | exon | 71342435 | 71343233 | 71342435 | ID=MsG0380015520.01.T02:exon:23809;Parent=MsG0380015520.01.T02 |
Chr3 | exon | 71343285 | 71343403 | 71343285 | ID=MsG0380015520.01.T02:exon:23808;Parent=MsG0380015520.01.T02 |
Chr3 | CDS | 71343285 | 71343403 | 71343285 | ID=MsG0380015520.01.T02:cds;Parent=MsG0380015520.01.T02 |
Chr3 | CDS | 71342657 | 71343233 | 71342657 | ID=MsG0380015520.01.T02:cds;Parent=MsG0380015520.01.T02 |
Chr3 | three_prime_UTR | 71342435 | 71342656 | 71342435 | ID=MsG0380015520.01.T02:three_prime_utr;Parent=MsG0380015520.01.T02 |
Chr3 | mRNA | 71342657 | 71343403 | 71342657 | ID=MsG0380015520.01.T03;Parent=MsG0380015520.01;Name=MsG0380015520.01.T03;_AED=0.29;_eAED=0.41;_QI=0|0|0|1|0|0|2|0|236 |
Chr3 | exon | 71342657 | 71343252 | 71342657 | ID=MsG0380015520.01.T03:exon:23811;Parent=MsG0380015520.01.T03 |
Chr3 | exon | 71343289 | 71343403 | 71343289 | ID=MsG0380015520.01.T03:exon:23810;Parent=MsG0380015520.01.T03 |
Chr3 | CDS | 71343289 | 71343403 | 71343289 | ID=MsG0380015520.01.T03:cds;Parent=MsG0380015520.01.T03 |
Chr3 | CDS | 71342657 | 71343252 | 71342657 | ID=MsG0380015520.01.T03:cds;Parent=MsG0380015520.01.T03 |
Chr3 | mRNA | 71342657 | 71343403 | 71342657 | ID=MsG0380015520.01.T04;Parent=MsG0380015520.01;Name=MsG0380015520.01.T04;_AED=0.29;_eAED=0.42;_QI=0|0|0|1|0|0|2|0|233 |
Chr3 | exon | 71342657 | 71343213 | 71342657 | ID=MsG0380015520.01.T04:exon:23813;Parent=MsG0380015520.01.T04 |
Chr3 | exon | 71343259 | 71343403 | 71343259 | ID=MsG0380015520.01.T04:exon:23812;Parent=MsG0380015520.01.T04 |
Chr3 | CDS | 71343259 | 71343403 | 71343259 | ID=MsG0380015520.01.T04:cds;Parent=MsG0380015520.01.T04 |
Chr3 | CDS | 71342657 | 71343213 | 71342657 | ID=MsG0380015520.01.T04:cds;Parent=MsG0380015520.01.T04 |
Chr3 | mRNA | 71342657 | 71343403 | 71342657 | ID=MsG0380015520.01.T05;Parent=MsG0380015520.01;Name=MsG0380015520.01.T05;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|0|1|0|248 |
Chr3 | exon | 71342657 | 71343403 | 71342657 | ID=MsG0380015520.01.T05:exon:23814;Parent=MsG0380015520.01.T05 |
Chr3 | CDS | 71342657 | 71343403 | 71342657 | ID=MsG0380015520.01.T05:cds;Parent=MsG0380015520.01.T05 |
Chr3 | mRNA | 71342657 | 71343187 | 71342657 | ID=MsG0380015520.01.T06;Parent=MsG0380015520.01;Name=MsG0380015520.01.T06;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|0|1|0|176 |
Chr3 | exon | 71342657 | 71343187 | 71342657 | ID=MsG0380015520.01.T06:exon:23815;Parent=MsG0380015520.01.T06 |
Chr3 | CDS | 71342657 | 71343187 | 71342657 | ID=MsG0380015520.01.T06:cds;Parent=MsG0380015520.01.T06 |
Chr3 | mRNA | 71342905 | 71342955 | 71342905 | ID=MsG0380015520.01.T07;Parent=MsG0380015520.01;Name=MsG0380015520.01.T07;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|0|1|0|16 |
Chr3 | exon | 71342905 | 71342955 | 71342905 | ID=MsG0380015520.01.T07:exon:23816;Parent=MsG0380015520.01.T07 |
Chr3 | CDS | 71342905 | 71342955 | 71342905 | ID=MsG0380015520.01.T07:cds;Parent=MsG0380015520.01.T07 |
Gene Sequence |
Protein sequence |