AlfalfaGEDB | MsG0280010793.01

M. sativa cultivar ZhongmuNo.1 / MsG0280010793.01

KEGG: -
GO: -
PFAM: PF02469

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010793.01.T01	XP_013465166.1	98.795	249	3	0	1	249	1	249	9.58E-176	493

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010793.01.T01	Q9SIL7	50.806	248	107	5	9	249	6	245	2.61E-72	224

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010793.01.T01	A0A072VC68	98.795	249	3	0	1	249	1	249	4.57e-176	493

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000011.01	MsG0280010793.01	0.835832	1.333488e-56	1.649989e-53
MsG0180005199.01	MsG0280010793.01	0.846360	2.280832e-59	3.915804e-56
MsG0280010793.01	MsG0380015520.01	0.829201	5.875874e-55	5.972857e-52
MsG0280010793.01	MsG0580025670.01	0.817220	3.691891e-52	2.672589e-49
MsG0280010793.01	MsG0580029237.01	-0.811744	6.006883e-51	3.748409e-48
MsG0280010793.01	MsG0680030630.01	0.806283	8.868825e-50	4.794744e-47
MsG0280010793.01	MsG0880045943.01	0.817536	3.133855e-52	2.288369e-49
MsG0280010793.01	MsG0880045958.01	0.835408	1.707680e-56	2.086405e-53

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010793.01.T01	MTR_2g090765	98.795	249	3	0	1	249	1	249	1.16e-179	493
MsG0280010793.01.T01	MTR_7g101080	46.193	197	104	2	16	210	17	213	1.57e-51	168
MsG0280010793.01.T01	MTR_4g059720	48.913	184	90	2	9	188	9	192	9.17e-49	161
MsG0280010793.01.T01	MTR_2g093990	48.649	148	76	0	38	185	41	188	4.52e-40	139
MsG0280010793.01.T01	MTR_4g059840	38.222	225	129	5	31	245	66	290	9.57e-40	139
MsG0280010793.01.T01	MTR_4g059790	40.704	199	108	3	31	227	66	256	6.53e-38	134
MsG0280010793.01.T01	MTR_4g053380	44.633	177	93	4	31	202	70	246	2.91e-37	133
MsG0280010793.01.T01	MTR_8g087460	37.255	255	136	10	14	248	66	316	9.95e-36	129
MsG0280010793.01.T01	MTR_8g087470	36.863	255	137	10	14	248	66	316	2.68e-35	128
MsG0280010793.01.T01	MTR_2g017960	40.449	178	103	2	38	214	68	243	1.04e-34	125
MsG0280010793.01.T01	MTR_2g017970	40.449	178	103	2	38	214	68	243	1.36e-34	125
MsG0280010793.01.T01	MTR_2g093980	36.323	223	134	5	29	249	60	276	3.90e-34	124
MsG0280010793.01.T01	MTR_8g087450	37.104	221	133	4	31	247	70	288	4.82e-32	119
MsG0280010793.01.T01	MTR_2g017950	36.199	221	119	6	20	220	50	268	6.54e-32	119
MsG0280010793.01.T01	MTR_2g093970	40.789	152	89	1	38	188	69	220	3.54e-30	114
MsG0280010793.01.T01	MTR_4g059780	38.650	163	99	1	27	188	79	241	7.67e-30	113
MsG0280010793.01.T01	MTR_7g075453	33.471	242	132	6	12	232	161	394	1.94e-28	112
MsG0280010793.01.T01	MTR_5g098060	34.524	168	108	2	37	203	47	213	1.00e-27	107
MsG0280010793.01.T01	MTR_5g098420	29.960	247	139	8	25	248	184	419	3.54e-18	83.2
MsG0280010793.01.T01	MTR_2g437700	29.630	189	123	6	8	190	164	348	1.78e-14	72.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010793.01.T01	AT2G20520	50.806	248	107	5	9	249	6	245	2.66e-73	224
MsG0280010793.01.T01	AT1G03870	53.953	215	92	3	37	249	38	247	2.16e-71	219
MsG0280010793.01.T01	AT5G44130	56.332	229	92	4	6	230	3	227	2.87e-68	211
MsG0280010793.01.T01	AT5G03170	56.667	180	75	3	27	204	25	203	2.12e-60	191
MsG0280010793.01.T01	AT5G60490	47.682	151	78	1	36	185	37	187	1.51e-41	142
MsG0280010793.01.T01	AT2G04780	34.896	192	117	4	37	224	45	232	1.29e-25	101
MsG0280010793.01.T01	AT2G04780	34.896	192	117	4	37	224	45	232	1.29e-25	101
MsG0280010793.01.T01	AT3G60900	33.333	192	122	3	18	209	171	356	6.18e-24	99.8
MsG0280010793.01.T01	AT2G45470	32.512	203	123	4	17	210	159	356	1.50e-18	84.3
MsG0280010793.01.T01	AT3G46550	31.579	171	109	5	20	185	190	357	1.91e-18	84.3
MsG0280010793.01.T01	AT4G12730	34.123	211	122	9	25	229	178	377	7.25e-18	82.4
MsG0280010793.01.T01	AT5G55730	31.169	154	100	3	37	189	185	333	6.34e-13	68.2
MsG0280010793.01.T01	AT5G55730	31.169	154	100	3	37	189	185	333	6.34e-13	68.2

Find 72 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGGCCTGAGGGTGCTGGTGC+TGG	0.134067	2:+75160576	None:intergenic
AGGGTGCTGGTGCTGGGGCT+TGG	0.151988	2:+75160583	None:intergenic
CTGGTGCTGGGGCTTGGGCT+TGG	0.184032	2:+75160589	None:intergenic
GGCCTGAGGGTGCTGGTGCT+GGG	0.229466	2:+75160577	None:intergenic
AAGATTGATGTGATGTTTAT+TGG	0.232703	2:+75160555	None:intergenic
TAATACCTGATGGAAGATTT+TGG	0.242668	2:+75160403	None:intergenic
CTTCTGGTAAAGAAGGTAAT+TGG	0.246525	2:-75160150	MsG0280010793.01.T01:CDS
GGGTGCTGGTGCTGGGGCTT+GGG	0.247233	2:+75160584	None:intergenic
TCATTTGATCTTCTTTGTCT+TGG	0.265276	2:-75159759	MsG0280010793.01.T01:three_prime_UTR
CATTTGATCTTCTTTGTCTT+GGG	0.284575	2:-75159758	MsG0280010793.01.T01:three_prime_UTR
TCGGAAAGAGAGTAGTATTT+TGG	0.290230	2:+75160208	None:intergenic
GGGGCTTGGGCTTGGATTTG+TGG	0.297552	2:+75160597	None:intergenic
CCAGAAGCTTGTGTTCTAAC+TGG	0.300644	2:+75160166	None:intergenic
GCTGGAAGGAATGTTGGTTT+TGG	0.343086	2:-75159860	MsG0280010793.01.T01:CDS
TCCTTTGGCTGTTTATCAAT+TGG	0.345240	2:-75160038	MsG0280010793.01.T01:CDS
TTTGGATTTGTTGCTGGGCT+TGG	0.356493	2:-75159842	MsG0280010793.01.T01:CDS
TTCTGGTAAAGAAGGTAATT+GGG	0.362073	2:-75160149	MsG0280010793.01.T01:CDS
ATTTGAAACTGTTAAGAAAT+CGG	0.370630	2:+75160189	None:intergenic
TTTGGAAGGCATTGTCTGTT+GGG	0.376563	2:+75160421	None:intergenic
AGATTGATGTGATGTTTATT+GGG	0.381794	2:+75160556	None:intergenic
TTTGAGACAACAATTTCCTT+TGG	0.394518	2:-75160053	MsG0280010793.01.T01:CDS
TGTCTCAAAGCATTGTTGAT+AGG	0.394899	2:+75160067	None:intergenic
TAAGATTGGAAGATGAGGTT+TGG	0.398107	2:+75160707	None:intergenic
AACCAAGTCAATGTTTCAAC+TGG	0.415400	2:-75160103	MsG0280010793.01.T01:CDS
CTTCAGAAGTTGAGTTGAGT+TGG	0.431445	2:+75160460	None:intergenic
TAGTGAAGGAGGATTAAGAT+TGG	0.436969	2:+75160693	None:intergenic
AAGTTGAGTTGAGTTGGGTT+TGG	0.439465	2:+75160466	None:intergenic
CCAGTTAGAACACAAGCTTC+TGG	0.442793	2:-75160166	MsG0280010793.01.T01:CDS
TTTATTGGGCCTGAGGGTGC+TGG	0.445785	2:+75160570	None:intergenic
GCCTGAGGGTGCTGGTGCTG+GGG	0.448279	2:+75160578	None:intergenic
TTGGATTTGTGGAGTTAAGA+AGG	0.451732	2:+75160608	None:intergenic
TTCAGAAGTTGAGTTGAGTT+GGG	0.456224	2:+75160461	None:intergenic
TGGGCTTGGTTTGATTTGCA+TGG	0.457325	2:-75159828	MsG0280010793.01.T01:CDS
GCCCCAGCACCAGCACCCTC+AGG	0.463369	2:-75160579	MsG0280010793.01.T01:CDS
AAGAAGGATGATAGTGCAGC+TGG	0.464254	2:-75159878	MsG0280010793.01.T01:CDS
GGGCTTGGTTTGATTTGCAT+GGG	0.469150	2:-75159827	MsG0280010793.01.T01:CDS
CCGAGCAGCAGCGACGTTGA+AGG	0.470821	2:-75159926	MsG0280010793.01.T01:CDS
GACGAATGAGGAAGGTGTAT+TGG	0.472056	2:+75160520	None:intergenic
GCCTTCCAAAATCTTCCATC+AGG	0.478103	2:-75160408	MsG0280010793.01.T01:intron
GTGAGAAGAATGAGTGCAAG+AGG	0.488921	2:+75160639	None:intergenic
CTCCAGTTGAAACATTGACT+TGG	0.506376	2:+75160101	None:intergenic
GAATGAGTTGAACTTTCTGT+TGG	0.508496	2:+75160245	None:intergenic
CCTTCAACGTCGCTGCTGCT+CGG	0.510769	2:+75159926	None:intergenic
GGTTTGATTTGATATGAACC+TGG	0.511093	2:-75159737	MsG0280010793.01.T01:three_prime_UTR
ACACAAGCTTCTGGTAAAGA+AGG	0.515910	2:-75160157	MsG0280010793.01.T01:CDS
ATCTCCAGCGTCTAGTAAGA+AGG	0.521844	2:-75159894	MsG0280010793.01.T01:CDS
TGGATTTGTGGAGTTAAGAA+GGG	0.522153	2:+75160609	None:intergenic
TTCTTACTAGACGCTGGAGA+TGG	0.526597	2:+75159896	None:intergenic
CAACTCAACTCAACTTCTGA+AGG	0.527769	2:-75160459	MsG0280010793.01.T01:CDS
AGGATTAAGATTGGAAGATG+AGG	0.537391	2:+75160702	None:intergenic
TAAGTCTCCATCTTCATCTC+CGG	0.540687	2:-75159981	MsG0280010793.01.T01:CDS
TTGGAAGGCATTGTCTGTTG+GGG	0.549695	2:+75160422	None:intergenic
TTTCATTGAGGAGACGAATG+AGG	0.550194	2:+75160508	None:intergenic
TTAGGAGCCGGAGATGAAGA+TGG	0.552898	2:+75159974	None:intergenic
ATAAATACAAAGAATAAGCC+AGG	0.554395	2:+75159719	None:intergenic
TCCAATTGATAAACAGCCAA+AGG	0.570662	2:+75160037	None:intergenic
GTGATGTTTATTGGGCCTGA+GGG	0.572050	2:+75160564	None:intergenic
GGCTGTTTATCAATTGGACA+AGG	0.577680	2:-75160032	MsG0280010793.01.T01:CDS
ATTGAGGAGACGAATGAGGA+AGG	0.579677	2:+75160512	None:intergenic
TGTAGTGGTGAGTGCCATGT+TGG	0.588720	2:+75160665	None:intergenic
GAACTTTCTGTTGGTCTGAG+AGG	0.589738	2:+75160254	None:intergenic
GGTCTTCACTTCACTTCACA+AGG	0.592303	2:-75160127	MsG0280010793.01.T01:CDS
AGTGCAGCTGGAAGGAATGT+TGG	0.593131	2:-75159866	MsG0280010793.01.T01:CDS
TGTTGGTAAGTTAGTGAAGG+AGG	0.593606	2:+75160682	None:intergenic
TCATCCTTCTTACTAGACGC+TGG	0.596871	2:+75159890	None:intergenic
TGTGATGTTTATTGGGCCTG+AGG	0.598868	2:+75160563	None:intergenic
CCATGTTGGTAAGTTAGTGA+AGG	0.621537	2:+75160679	None:intergenic
TCTGGTAAAGAAGGTAATTG+GGG	0.623440	2:-75160148	MsG0280010793.01.T01:CDS
GAGTGCAAGAGGTGTTGTAG+TGG	0.624287	2:+75160650	None:intergenic
AGGATGATAGTGCAGCTGGA+AGG	0.628901	2:-75159874	MsG0280010793.01.T01:CDS
TGAGTTGTTGAGTTTCATTG+AGG	0.637415	2:+75160496	None:intergenic
CCTTCACTAACTTACCAACA+TGG	0.651785	2:-75160679	MsG0280010793.01.T01:exon

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATAAATTATAATACCTGA+TGG	+	Chr2:75159959-75159978	None:intergenic	15.0%
!!	CATGCAAGTTATAATTATAT+AGG	+	Chr2:75160023-75160042	None:intergenic	20.0%
!!	TAACATTTATGTCTATTATC+AGG	-	Chr2:75160060-75160079	MsG0280010793.01.T01:CDS	20.0%
!!!	ATTTGAAACTGTTAAGAAAT+CGG	+	Chr2:75160163-75160182	None:intergenic	20.0%
!	AAGATTGATGTGATGTTTAT+TGG	+	Chr2:75159797-75159816	None:intergenic	25.0%
!	AGATTGATGTGATGTTTATT+GGG	+	Chr2:75159796-75159815	None:intergenic	25.0%
!	ATAAATACAAAGAATAAGCC+AGG	+	Chr2:75160633-75160652	None:intergenic	25.0%
!!!	GATTGTCTTACATATTTTGA+AGG	-	Chr2:75160683-75160702	MsG0280010793.01.T01:five_prime_UTR	25.0%
	CATTTGATCTTCTTTGTCTT+GGG	-	Chr2:75160591-75160610	MsG0280010793.01.T01:CDS	30.0%
	TCATTTGATCTTCTTTGTCT+TGG	-	Chr2:75160590-75160609	MsG0280010793.01.T01:CDS	30.0%
	TTCTGGTAAAGAAGGTAATT+GGG	-	Chr2:75160200-75160219	MsG0280010793.01.T01:CDS	30.0%
!	ACATCAATCTTTGAAAAAGC+TGG	-	Chr2:75159806-75159825	MsG0280010793.01.T01:exon	30.0%
!	TAATACCTGATGGAAGATTT+TGG	+	Chr2:75159949-75159968	None:intergenic	30.0%
!	TTGTTACCTTCTGAACTTTT+TGG	-	Chr2:75160342-75160361	MsG0280010793.01.T01:intron	30.0%
!	TTTGAGACAACAATTTCCTT+TGG	-	Chr2:75160296-75160315	MsG0280010793.01.T01:intron	30.0%
!!!	AGTAGTATTTTGGTGTAACA+TGG	+	Chr2:75160134-75160153	None:intergenic	30.0%
	AACCAAGTCAATGTTTCAAC+TGG	-	Chr2:75160246-75160265	MsG0280010793.01.T01:CDS	35.0%
	AGGATTAAGATTGGAAGATG+AGG	+	Chr2:75159650-75159669	None:intergenic	35.0%
	CTTCTGGTAAAGAAGGTAAT+TGG	-	Chr2:75160199-75160218	MsG0280010793.01.T01:CDS	35.0%
	TAAGATTGGAAGATGAGGTT+TGG	+	Chr2:75159645-75159664	None:intergenic	35.0%
	TAGTGAAGGAGGATTAAGAT+TGG	+	Chr2:75159659-75159678	None:intergenic	35.0%
	TCCAATTGATAAACAGCCAA+AGG	+	Chr2:75160315-75160334	None:intergenic	35.0%
	TCCTTTGGCTGTTTATCAAT+TGG	-	Chr2:75160311-75160330	MsG0280010793.01.T01:intron	35.0%
	TCTGGTAAAGAAGGTAATTG+GGG	-	Chr2:75160201-75160220	MsG0280010793.01.T01:CDS	35.0%
	TGAGTTGTTGAGTTTCATTG+AGG	+	Chr2:75159856-75159875	None:intergenic	35.0%
	TGGATTTGTGGAGTTAAGAA+GGG	+	Chr2:75159743-75159762	None:intergenic	35.0%
	TTAGCACCAAAAAGTTCAGA+AGG	+	Chr2:75160351-75160370	None:intergenic	35.0%
	TTGGATTTGTGGAGTTAAGA+AGG	+	Chr2:75159744-75159763	None:intergenic	35.0%
!	GAATGAGTTGAACTTTCTGT+TGG	+	Chr2:75160107-75160126	None:intergenic	35.0%
!	TCGGAAAGAGAGTAGTATTT+TGG	+	Chr2:75160144-75160163	None:intergenic	35.0%
!!	GGTTTGATTTGATATGAACC+TGG	-	Chr2:75160612-75160631	MsG0280010793.01.T01:CDS	35.0%
!!	TGTCTCAAAGCATTGTTGAT+AGG	+	Chr2:75160285-75160304	None:intergenic	35.0%
!!	TTCAGAAGTTGAGTTGAGTT+GGG	+	Chr2:75159891-75159910	None:intergenic	35.0%
!!!	TTGGTTTTGGATTTGTTGCT+GGG	-	Chr2:75160502-75160521	MsG0280010793.01.T01:CDS	35.0%
	ACACAAGCTTCTGGTAAAGA+AGG	-	Chr2:75160192-75160211	MsG0280010793.01.T01:CDS	40.0%
	CAACTCAACTCAACTTCTGA+AGG	-	Chr2:75159890-75159909	MsG0280010793.01.T01:CDS	40.0%
	CCTTCACTAACTTACCAACA+TGG	-	Chr2:75159670-75159689	MsG0280010793.01.T01:three_prime_UTR	40.0%
	GGCTGTTTATCAATTGGACA+AGG	-	Chr2:75160317-75160336	MsG0280010793.01.T01:intron	40.0%
	TAAGTCTCCATCTTCATCTC+CGG	-	Chr2:75160368-75160387	MsG0280010793.01.T01:intron	40.0%
	TTTCATTGAGGAGACGAATG+AGG	+	Chr2:75159844-75159863	None:intergenic	40.0%
!	ACCTGATGGAAGATTTTGGA+AGG	+	Chr2:75159945-75159964	None:intergenic	40.0%
!	CCATGTTGGTAAGTTAGTGA+AGG	+	Chr2:75159673-75159692	None:intergenic	40.0%
!	CTCCAGTTGAAACATTGACT+TGG	+	Chr2:75160251-75160270	None:intergenic	40.0%
!	TGTTGGTAAGTTAGTGAAGG+AGG	+	Chr2:75159670-75159689	None:intergenic	40.0%
!!	AAGTTGAGTTGAGTTGGGTT+TGG	+	Chr2:75159886-75159905	None:intergenic	40.0%
!!	CTTCAGAAGTTGAGTTGAGT+TGG	+	Chr2:75159892-75159911	None:intergenic	40.0%
!!	TTTGGAAGGCATTGTCTGTT+GGG	+	Chr2:75159931-75159950	None:intergenic	40.0%
!!!	GTTGGTTTTGGATTTGTTGC+TGG	-	Chr2:75160501-75160520	MsG0280010793.01.T01:CDS	40.0%
!!!	TTTTGGAAGGCATTGTCTGT+TGG	+	Chr2:75159932-75159951	None:intergenic	40.0%
	ATCTCCAGCGTCTAGTAAGA+AGG	-	Chr2:75160455-75160474	MsG0280010793.01.T01:CDS	45.0%
	ATTGAGGAGACGAATGAGGA+AGG	+	Chr2:75159840-75159859	None:intergenic	45.0%
	CCAGAAGCTTGTGTTCTAAC+TGG	+	Chr2:75160186-75160205	None:intergenic	45.0%
	CCAGTTAGAACACAAGCTTC+TGG	-	Chr2:75160183-75160202	MsG0280010793.01.T01:CDS	45.0%
	GCCTTCCAAAATCTTCCATC+AGG	-	Chr2:75159941-75159960	MsG0280010793.01.T01:CDS	45.0%
	GGTCTTCACTTCACTTCACA+AGG	-	Chr2:75160222-75160241	MsG0280010793.01.T01:CDS	45.0%
	GTGAGAAGAATGAGTGCAAG+AGG	+	Chr2:75159713-75159732	None:intergenic	45.0%
	GTGATGTTTATTGGGCCTGA+GGG	+	Chr2:75159788-75159807	None:intergenic	45.0%
	TCATCCTTCTTACTAGACGC+TGG	+	Chr2:75160462-75160481	None:intergenic	45.0%
	TGTGATGTTTATTGGGCCTG+AGG	+	Chr2:75159789-75159808	None:intergenic	45.0%
	TTCTTACTAGACGCTGGAGA+TGG	+	Chr2:75160456-75160475	None:intergenic	45.0%
!	AAGAAGGATGATAGTGCAGC+TGG	-	Chr2:75160471-75160490	MsG0280010793.01.T01:CDS	45.0%
!	GAACTTTCTGTTGGTCTGAG+AGG	+	Chr2:75160098-75160117	None:intergenic	45.0%
!	GAAGGAGTTTTCGACGACTT+AGG	+	Chr2:75160396-75160415	None:intergenic	45.0%
!	GACGAATGAGGAAGGTGTAT+TGG	+	Chr2:75159832-75159851	None:intergenic	45.0%
!!	GGGCTTGGTTTGATTTGCAT+GGG	-	Chr2:75160522-75160541	MsG0280010793.01.T01:CDS	45.0%
!!	TGGGCTTGGTTTGATTTGCA+TGG	-	Chr2:75160521-75160540	MsG0280010793.01.T01:CDS	45.0%
!!	TTGGAAGGCATTGTCTGTTG+GGG	+	Chr2:75159930-75159949	None:intergenic	45.0%
!!	TTTGGATTTGTTGCTGGGCT+TGG	-	Chr2:75160507-75160526	MsG0280010793.01.T01:CDS	45.0%
!!!	GCTGGAAGGAATGTTGGTTT+TGG	-	Chr2:75160489-75160508	MsG0280010793.01.T01:CDS	45.0%
	AGTGCAGCTGGAAGGAATGT+TGG	-	Chr2:75160483-75160502	MsG0280010793.01.T01:CDS	50.0%
	TGTAGTGGTGAGTGCCATGT+TGG	+	Chr2:75159687-75159706	None:intergenic	50.0%
	TTAGGAGCCGGAGATGAAGA+TGG	+	Chr2:75160378-75160397	None:intergenic	50.0%
!	AGGATGATAGTGCAGCTGGA+AGG	-	Chr2:75160475-75160494	MsG0280010793.01.T01:CDS	50.0%
!	GTTTTCGACGACTTAGGAGC+CGG	+	Chr2:75160390-75160409	None:intergenic	50.0%
!!	GAGTGCAAGAGGTGTTGTAG+TGG	+	Chr2:75159702-75159721	None:intergenic	50.0%
!!!	CTGCTGCTCGGTGTTTTAGA+AGG	+	Chr2:75160414-75160433	None:intergenic	50.0%
!	TTTATTGGGCCTGAGGGTGC+TGG	+	Chr2:75159782-75159801	None:intergenic	55.0%
	CCTTCAACGTCGCTGCTGCT+CGG	+	Chr2:75160426-75160445	None:intergenic	60.0%
	GGGGCTTGGGCTTGGATTTG+TGG	+	Chr2:75159755-75159774	None:intergenic	60.0%
	CCGAGCAGCAGCGACGTTGA+AGG	-	Chr2:75160423-75160442	MsG0280010793.01.T01:CDS	65.0%
!	CTGGTGCTGGGGCTTGGGCT+TGG	+	Chr2:75159763-75159782	None:intergenic	70.0%
!!	AGGGTGCTGGTGCTGGGGCT+TGG	+	Chr2:75159769-75159788	None:intergenic	70.0%
!!	GCCTGAGGGTGCTGGTGCTG+GGG	+	Chr2:75159774-75159793	None:intergenic	70.0%
!!	GGCCTGAGGGTGCTGGTGCT+GGG	+	Chr2:75159775-75159794	None:intergenic	70.0%
!!	GGGTGCTGGTGCTGGGGCTT+GGG	+	Chr2:75159768-75159787	None:intergenic	70.0%
	GCCCCAGCACCAGCACCCTC+AGG	-	Chr2:75159770-75159789	MsG0280010793.01.T01:three_prime_UTR	75.0%
!!	GGGCCTGAGGGTGCTGGTGC+TGG	+	Chr2:75159776-75159795	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	75159641	75160730	75159641	ID=MsG0280010793.01;Name=MsG0280010793.01
Chr2	mRNA	75159641	75160730	75159641	ID=MsG0280010793.01.T01;Parent=MsG0280010793.01;Name=MsG0280010793.01.T01;_AED=0.49;_eAED=0.49;_QI=48\|1\|1\|1\|1\|1\|2\|173\|249
Chr2	exon	75159641	75160289	75159641	ID=MsG0280010793.01.T01:exon:11078;Parent=MsG0280010793.01.T01
Chr2	exon	75160409	75160730	75160409	ID=MsG0280010793.01.T01:exon:11077;Parent=MsG0280010793.01.T01
Chr2	five_prime_UTR	75160683	75160730	75160683	ID=MsG0280010793.01.T01:five_prime_utr;Parent=MsG0280010793.01.T01
Chr2	CDS	75160409	75160682	75160409	ID=MsG0280010793.01.T01:cds;Parent=MsG0280010793.01.T01
Chr2	CDS	75159814	75160289	75159814	ID=MsG0280010793.01.T01:cds;Parent=MsG0280010793.01.T01
Chr2	three_prime_UTR	75159641	75159813	75159641	ID=MsG0280010793.01.T01:three_prime_utr;Parent=MsG0280010793.01.T01

Gene Sequence

>MsG0280010793.01.T01

ATGGCACTCACCACTACAACACCTCTTGCACTCATTCTTCTCACTCTCATTCCCTTCTTAACTCCACAAATCCAAGCCCAAGCCCCAGCACCAGCACCCTCAGGCCCAATAAACATCACATCAATCTTTGAAAAAGCTGGCCAATACACCTTCCTCATTCGTCTCCTCAATGAAACTCAACAACTCACTCAAATCCAAACCCAACTCAACTCAACTTCTGAAGGTTTCACAATCTTTGCCCCAACAGACAATGCCTTCCAAAATCTTCCATCAGGAGCAATCAACGACCTCTCAGACCAACAGAAAGTTCAACTCATTCTCTACCATGTTACACCAAAATACTACTCTCTTTCCGATTTCTTAACAGTTTCAAATCCAGTTAGAACACAAGCTTCTGGTAAAGAAGGTAATTGGGGTCTTCACTTCACTTCACAAGGTAACCAAGTCAATGTTTCAACTGGAGTTGTTACTGTACCTATCAACAATGCTTTGAGACAACAATTTCCTTTGGCTGTTTATCAATTGGACAAGGTTTTGTTACCTTCTGAACTTTTTGGTGCTAAGTCTCCATCTTCATCTCCGGCTCCTAAGTCGTCGAAAACTCCTTCTAAAACACCGAGCAGCAGCGACGTTGAAGGTGATGCTCCATCTCCAGCGTCTAGTAAGAAGGATGATAGTGCAGCTGGAAGGAATGTTGGTTTTGGATTTGTTGCTGGGCTTGGTTTGATTTGCATGGGAGTTCTTTTTTGA

Protein sequence

>MsG0280010793.01.T01

MALTTTTPLALILLTLIPFLTPQIQAQAPAPAPSGPINITSIFEKAGQYTFLIRLLNETQQLTQIQTQLNSTSEGFTIFAPTDNAFQNLPSGAINDLSDQQKVQLILYHVTPKYYSLSDFLTVSNPVRTQASGKEGNWGLHFTSQGNQVNVSTGVVTVPINNALRQQFPLAVYQLDKVLLPSELFGAKSPSSSPAPKSSKTPSKTPSSSDVEGDAPSPASSKKDDSAAGRNVGFGFVAGLGLICMGVLF*