Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015988.01.T01 | XP_013461126.1 | 93.79 | 773 | 28 | 2 | 1 | 753 | 1 | 773 | 0 | 1489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015988.01.T01 | P27480 | 66.923 | 780 | 227 | 7 | 1 | 753 | 1 | 776 | 0 | 1063 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015988.01.T01 | A0A072VAE0 | 93.790 | 773 | 28 | 2 | 1 | 753 | 1 | 773 | 0.0 | 1489 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380012315.01 | MsG0380015988.01 | 0.807600 | 4.669847e-50 | 2.611844e-47 |
| MsG0380015988.01 | MsG0580024689.01 | 0.810233 | 1.276235e-50 | 7.651399e-48 |
| MsG0380015988.01 | MsG0880042645.01 | 0.897206 | 1.760813e-76 | 1.968345e-72 |
| MsG0380015988.01 | MsG0880042650.01 | 0.901767 | 1.919441e-78 | 2.632310e-74 |
| MsG0380015988.01 | MsG0880043918.01 | 0.855390 | 6.513405e-62 | 1.501543e-58 |
| MsG0380015988.01 | MsG0880045259.01 | 0.805881 | 1.077490e-49 | 5.765862e-47 |
| MsG0280007902.01 | MsG0380015988.01 | 0.807710 | 4.424703e-50 | 2.481996e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015988.01.T01 | MTR_3g081130 | 93.790 | 773 | 28 | 2 | 1 | 753 | 1 | 773 | 0.0 | 1489 |
| MsG0380015988.01.T01 | MTR_3g081130 | 93.295 | 701 | 27 | 2 | 73 | 753 | 1 | 701 | 0.0 | 1348 |
| MsG0380015988.01.T01 | MTR_5g024020 | 66.033 | 789 | 229 | 12 | 1 | 755 | 1 | 784 | 0.0 | 1041 |
| MsG0380015988.01.T01 | MTR_8g018730 | 65.987 | 785 | 233 | 9 | 1 | 755 | 1 | 781 | 0.0 | 1031 |
| MsG0380015988.01.T01 | MTR_2g099560 | 63.787 | 787 | 246 | 10 | 1 | 755 | 1 | 780 | 0.0 | 1018 |
| MsG0380015988.01.T01 | MTR_8g018735 | 64.602 | 791 | 235 | 10 | 1 | 755 | 1 | 782 | 0.0 | 1018 |
| MsG0380015988.01.T01 | MTR_8g018730 | 64.917 | 781 | 218 | 8 | 1 | 755 | 1 | 751 | 0.0 | 1000 |
| MsG0380015988.01.T01 | MTR_2g099570 | 62.806 | 777 | 258 | 8 | 4 | 755 | 8 | 778 | 0.0 | 994 |
| MsG0380015988.01.T01 | MTR_8g018420 | 61.899 | 769 | 265 | 6 | 10 | 755 | 9 | 772 | 0.0 | 987 |
| MsG0380015988.01.T01 | MTR_5g024020 | 62.738 | 789 | 219 | 13 | 1 | 755 | 1 | 748 | 0.0 | 971 |
| MsG0380015988.01.T01 | MTR_8g018570 | 60.563 | 781 | 277 | 8 | 4 | 755 | 8 | 786 | 0.0 | 966 |
| MsG0380015988.01.T01 | MTR_8g018550 | 61.204 | 781 | 270 | 7 | 4 | 755 | 8 | 784 | 0.0 | 954 |
| MsG0380015988.01.T01 | MTR_8g020990 | 59.435 | 779 | 287 | 6 | 4 | 755 | 8 | 784 | 0.0 | 952 |
| MsG0380015988.01.T01 | MTR_8g018520 | 59.283 | 781 | 285 | 8 | 4 | 755 | 8 | 784 | 0.0 | 949 |
| MsG0380015988.01.T01 | MTR_8g018430 | 58.398 | 774 | 293 | 7 | 5 | 753 | 6 | 775 | 0.0 | 946 |
| MsG0380015988.01.T01 | MTR_8g018510 | 58.899 | 781 | 289 | 8 | 4 | 755 | 8 | 785 | 0.0 | 944 |
| MsG0380015988.01.T01 | MTR_8g018690 | 59.254 | 778 | 287 | 7 | 4 | 755 | 8 | 781 | 0.0 | 938 |
| MsG0380015988.01.T01 | MTR_8g018690 | 57.712 | 778 | 279 | 8 | 4 | 755 | 8 | 761 | 0.0 | 904 |
| MsG0380015988.01.T01 | MTR_1g083020 | 54.569 | 777 | 307 | 7 | 8 | 755 | 16 | 775 | 0.0 | 853 |
| MsG0380015988.01.T01 | MTR_7g113410 | 53.444 | 784 | 313 | 11 | 6 | 755 | 19 | 784 | 0.0 | 845 |
| MsG0380015988.01.T01 | MTR_8g018450 | 54.044 | 779 | 295 | 9 | 1 | 753 | 1 | 742 | 0.0 | 843 |
| MsG0380015988.01.T01 | MTR_1g104650 | 52.746 | 783 | 311 | 10 | 8 | 753 | 6 | 766 | 0.0 | 829 |
| MsG0380015988.01.T01 | MTR_8g018735 | 62.500 | 624 | 189 | 10 | 1 | 588 | 1 | 615 | 0.0 | 758 |
| MsG0380015988.01.T01 | MTR_8g018650 | 50.648 | 772 | 292 | 11 | 10 | 752 | 9 | 720 | 0.0 | 751 |
| MsG0380015988.01.T01 | MTR_8g018620 | 50.585 | 769 | 297 | 13 | 10 | 752 | 9 | 720 | 0.0 | 746 |
| MsG0380015988.01.T01 | MTR_8g018590 | 51.482 | 742 | 294 | 12 | 54 | 762 | 32 | 740 | 0.0 | 740 |
| MsG0380015988.01.T01 | MTR_8g018730 | 67.265 | 501 | 139 | 5 | 277 | 754 | 2 | 500 | 0.0 | 686 |
| MsG0380015988.01.T01 | MTR_8g020970 | 44.687 | 734 | 370 | 11 | 49 | 752 | 113 | 840 | 0.0 | 594 |
| MsG0380015988.01.T01 | MTR_8g080230 | 42.287 | 726 | 368 | 16 | 56 | 744 | 109 | 820 | 0.0 | 544 |
| MsG0380015988.01.T01 | MTR_8g011340 | 38.606 | 746 | 406 | 13 | 48 | 752 | 46 | 780 | 2.63e-176 | 527 |
| MsG0380015988.01.T01 | MTR_4g088810 | 41.642 | 682 | 344 | 12 | 99 | 753 | 155 | 809 | 9.15e-172 | 517 |
| MsG0380015988.01.T01 | MTR_3g079450 | 39.467 | 750 | 398 | 17 | 39 | 753 | 89 | 817 | 1.77e-170 | 514 |
| MsG0380015988.01.T01 | MTR_3g479460 | 38.867 | 777 | 418 | 19 | 14 | 753 | 62 | 818 | 2.70e-168 | 508 |
| MsG0380015988.01.T01 | MTR_4g066170 | 38.365 | 795 | 424 | 23 | 4 | 753 | 48 | 821 | 1.40e-166 | 504 |
| MsG0380015988.01.T01 | MTR_3g079420 | 40.027 | 737 | 401 | 14 | 20 | 725 | 25 | 751 | 1.45e-164 | 498 |
| MsG0380015988.01.T01 | MTR_8g020970 | 43.684 | 570 | 285 | 11 | 49 | 588 | 113 | 676 | 1.09e-138 | 424 |
| MsG0380015988.01.T01 | MTR_8g021020 | 58.307 | 319 | 109 | 3 | 458 | 753 | 28 | 345 | 5.95e-128 | 388 |
| MsG0380015988.01.T01 | MTR_3g079450 | 38.079 | 583 | 307 | 15 | 39 | 588 | 89 | 650 | 1.04e-115 | 364 |
| MsG0380015988.01.T01 | MTR_6g452500 | 36.567 | 536 | 296 | 10 | 248 | 752 | 13 | 535 | 2.72e-110 | 349 |
| MsG0380015988.01.T01 | MTR_7g012030 | 45.736 | 129 | 55 | 2 | 495 | 608 | 75 | 203 | 4.44e-25 | 104 |
| MsG0380015988.01.T01 | MTR_6g046330 | 49.167 | 120 | 44 | 3 | 504 | 608 | 87 | 204 | 5.20e-24 | 103 |
| MsG0380015988.01.T01 | MTR_8g463810 | 32.759 | 232 | 96 | 8 | 397 | 624 | 182 | 357 | 4.46e-22 | 100 |
| MsG0380015988.01.T01 | MTR_5g023990 | 50.000 | 68 | 21 | 1 | 624 | 691 | 145 | 199 | 6.46e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015988.01.T01 | AT1G55020 | 54.044 | 779 | 305 | 10 | 9 | 755 | 19 | 776 | 0.0 | 832 |
| MsG0380015988.01.T01 | AT3G22400 | 51.026 | 780 | 329 | 10 | 10 | 753 | 34 | 796 | 0.0 | 790 |
| MsG0380015988.01.T01 | AT1G72520 | 43.639 | 731 | 375 | 13 | 49 | 747 | 114 | 839 | 0.0 | 585 |
| MsG0380015988.01.T01 | AT1G17420 | 42.875 | 779 | 377 | 17 | 8 | 747 | 83 | 832 | 0.0 | 585 |
| MsG0380015988.01.T01 | AT3G45140 | 41.384 | 737 | 380 | 16 | 49 | 753 | 95 | 811 | 1.03e-175 | 527 |
| MsG0380015988.01.T01 | AT3G45140 | 43.131 | 677 | 342 | 15 | 109 | 753 | 4 | 669 | 1.70e-173 | 517 |
| MsG0380015988.01.T01 | AT1G67560 | 41.691 | 686 | 357 | 15 | 100 | 752 | 154 | 829 | 7.08e-164 | 498 |
Find 224 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGAGAGGTTATTCATTT+TGG | 0.130485 | 3:+77580396 | MsG0380015988.01.T01:CDS |
| TTTGAATGGGATAATGATTT+TGG | 0.139751 | 3:+77578848 | MsG0380015988.01.T01:CDS |
| TATGATGTTTACAATGATTT+AGG | 0.168997 | 3:+77579293 | MsG0380015988.01.T01:CDS |
| CTCCATTTCTGCATATTCTT+TGG | 0.185435 | 3:-77581484 | None:intergenic |
| TGTTGGAGATCAGTTCTTTC+TGG | 0.199460 | 3:+77578769 | MsG0380015988.01.T01:CDS |
| ATGTGGAATTGGATACTTTA+AGG | 0.205166 | 3:+77579225 | MsG0380015988.01.T01:CDS |
| TTGTAACGTTGTTACCTTAT+TGG | 0.205979 | 3:-77579029 | None:intergenic |
| CTTTGAACACCATGTCCTTC+TGG | 0.214131 | 3:-77580601 | None:intergenic |
| CAAGCTGACTTCCTTGGATT+TGG | 0.218445 | 3:+77579609 | MsG0380015988.01.T01:CDS |
| CCTTCACTTGGAGCTGGATT+TGG | 0.225347 | 3:+77578416 | MsG0380015988.01.T01:CDS |
| GTTGATCAAATGTTGTATTT+TGG | 0.261586 | 3:+77581938 | MsG0380015988.01.T01:three_prime_UTR |
| ATCCAGAGCTCCAAGAGTTT+TGG | 0.282255 | 3:+77581250 | MsG0380015988.01.T01:CDS |
| CATTGGGATCTAGCTTGCTT+TGG | 0.293511 | 3:-77580148 | None:intergenic |
| ACTAACTAACTAACCTGTTT+TGG | 0.297314 | 3:-77579411 | None:intergenic |
| AAGATTATTACTGTCAGTTT+TGG | 0.302148 | 3:-77578525 | None:intergenic |
| TGCTGCCAAGGTTGGTAAAA+TGG | 0.304872 | 3:-77578803 | None:intergenic |
| CTGTTGATGGATTAGAGATA+TGG | 0.306225 | 3:+77581157 | MsG0380015988.01.T01:CDS |
| GCTCCATATTGTTCGCCATC+TGG | 0.310105 | 3:-77580556 | None:intergenic |
| GCAAGGTCTCGACTCTTATC+TGG | 0.311917 | 3:-77579320 | None:intergenic |
| ATTGGGATCTAGCTTGCTTT+GGG | 0.318628 | 3:-77580147 | None:intergenic |
| TTCCACGCAGCTGTCAATTT+CGG | 0.322031 | 3:+77581390 | MsG0380015988.01.T01:CDS |
| CCCAATAGTGTGTCTATCTA+AGG | 0.329449 | 3:+77581821 | MsG0380015988.01.T01:three_prime_UTR |
| CCTTATTGGCAAAGAAAATT+CGG | 0.330425 | 3:-77579015 | None:intergenic |
| TTCCAAAACTCTTGGAGCTC+TGG | 0.331368 | 3:-77581252 | None:intergenic |
| AGAGATATGGGATGCTATTA+AGG | 0.334051 | 3:+77581170 | MsG0380015988.01.T01:CDS |
| TTGTTCTCAAATAAGCTCTT+TGG | 0.340519 | 3:-77581515 | None:intergenic |
| CCATGGGGTGCACTGGCATC+TGG | 0.359640 | 3:-77581102 | None:intergenic |
| TTCTGCAGTTTACAAGGATT+GGG | 0.364413 | 3:+77580896 | MsG0380015988.01.T01:CDS |
| AAAGTGTAGGGCATCTTAAC+CGG | 0.367537 | 3:-77581755 | None:intergenic |
| CCAGTTCGGTTAAGCAAATC+TGG | 0.375916 | 3:-77581731 | None:intergenic |
| TCAAAGAACAATTTGGCAAT+TGG | 0.376529 | 3:+77580618 | MsG0380015988.01.T01:CDS |
| GTGGCATAAGACTTTGGAAT+AGG | 0.385698 | 3:-77580463 | None:intergenic |
| TAACTTCAGACATGTGGAAT+TGG | 0.386708 | 3:+77579214 | MsG0380015988.01.T01:CDS |
| CACCCAGATGGCGAACAATA+TGG | 0.387853 | 3:+77580553 | MsG0380015988.01.T01:CDS |
| GGAATGGGAAATGGATTTGT+TGG | 0.388088 | 3:+77578752 | MsG0380015988.01.T01:intron |
| CGACTTCTTTCCAAAACTCT+TGG | 0.388162 | 3:-77581260 | None:intergenic |
| CCACCTCCCCATGTCATTCA+AGG | 0.388187 | 3:+77579831 | MsG0380015988.01.T01:CDS |
| TCAATGAGGGCCTCAGTCTT+TGG | 0.388800 | 3:-77581543 | None:intergenic |
| TTGGAAGAACCTCCGAGAAT+TGG | 0.389441 | 3:-77579347 | None:intergenic |
| CTTCTGCAGTTTACAAGGAT+TGG | 0.394299 | 3:+77580895 | MsG0380015988.01.T01:CDS |
| TCCTTAGATAGACACACTAT+TGG | 0.398218 | 3:-77581822 | None:intergenic |
| AACCAAAGAATATGCAGAAA+TGG | 0.398387 | 3:+77581482 | MsG0380015988.01.T01:CDS |
| TCTAATCCATCAACAGCAAA+AGG | 0.402862 | 3:-77581150 | None:intergenic |
| TTACCAACCTTGGCAGCAAC+AGG | 0.404094 | 3:+77578808 | MsG0380015988.01.T01:CDS |
| GACCTTGCTCGTCCAATTCT+CGG | 0.407548 | 3:+77579335 | MsG0380015988.01.T01:CDS |
| TCCCATCATCTTTCAAGAAT+AGG | 0.410296 | 3:-77580495 | None:intergenic |
| TTGAAGCAAGCTGACTTCCT+TGG | 0.412899 | 3:+77579603 | MsG0380015988.01.T01:CDS |
| AAGGAGGTTAATTCCTGAAA+AGG | 0.413826 | 3:+77581458 | MsG0380015988.01.T01:CDS |
| AAGCTAGATCCCAATGTCTA+TGG | 0.414423 | 3:+77580155 | MsG0380015988.01.T01:CDS |
| GTTGTTGGTGGTGTTATTGA+TGG | 0.414806 | 3:+77578452 | MsG0380015988.01.T01:CDS |
| TGACCAAACACTTCATCTCT+TGG | 0.417315 | 3:-77579579 | None:intergenic |
| ATCCTATTCTTGAAAGATGA+TGG | 0.417499 | 3:+77580493 | MsG0380015988.01.T01:CDS |
| TTACATTTCTTTGCAACTCA+TGG | 0.419402 | 3:+77578963 | MsG0380015988.01.T01:CDS |
| ATTTCCTTTACCATTGCAAT+GGG | 0.435335 | 3:-77579774 | None:intergenic |
| TTCCTTGGATTTGGATTGAA+AGG | 0.437541 | 3:+77579618 | MsG0380015988.01.T01:CDS |
| GGCAGAAAACCTACCAAAAC+AGG | 0.440053 | 3:+77579398 | MsG0380015988.01.T01:CDS |
| AACAGGAATGCGTGAGGAAT+GGG | 0.441400 | 3:+77579256 | MsG0380015988.01.T01:CDS |
| CCTTAGATAGACACACTATT+GGG | 0.441617 | 3:-77581821 | None:intergenic |
| ATGGTGTTCAAAGAACAATT+TGG | 0.442618 | 3:+77580611 | MsG0380015988.01.T01:CDS |
| CAAAAGGTTTGCAAAGAAGA+TGG | 0.447060 | 3:+77581670 | MsG0380015988.01.T01:three_prime_UTR |
| ATTAACCTCCTTGTCATAGT+TGG | 0.447136 | 3:-77581447 | None:intergenic |
| ACATGAAATGCCAGCTCCAC+TGG | 0.447913 | 3:+77579190 | MsG0380015988.01.T01:CDS |
| GTTGCAGCAACAATACTTGT+AGG | 0.448093 | 3:-77581859 | None:intergenic |
| GATGTCTTCTGCAGTTTACA+AGG | 0.449432 | 3:+77580890 | MsG0380015988.01.T01:CDS |
| CCAGATTTGCTTAACCGAAC+TGG | 0.454793 | 3:+77581731 | MsG0380015988.01.T01:three_prime_UTR |
| AACAATTTGGCAATTGGCCA+AGG | 0.456696 | 3:+77580624 | MsG0380015988.01.T01:CDS |
| GATGGTGCTACTGCTATCTT+AGG | 0.457579 | 3:+77578470 | MsG0380015988.01.T01:CDS |
| GCGAAGTCCATGGGGTGCAC+TGG | 0.462964 | 3:-77581109 | None:intergenic |
| ATCTCAACAGCGTACGGTCC+TGG | 0.464307 | 3:-77580870 | None:intergenic |
| CTCCATATTGTTCGCCATCT+GGG | 0.465552 | 3:-77580555 | None:intergenic |
| GAGCTCTGGATCTCTTTGAA+TGG | 0.465944 | 3:-77581238 | None:intergenic |
| TGTGGAATTGGATACTTTAA+GGG | 0.470355 | 3:+77579226 | MsG0380015988.01.T01:CDS |
| TGAGTTGCAAAGAAATGTAA+TGG | 0.473824 | 3:-77578960 | None:intergenic |
| AGTCTTGCTCAATAATCATA+TGG | 0.473855 | 3:+77581355 | MsG0380015988.01.T01:CDS |
| GTCCCAAGAGATGAAGTGTT+TGG | 0.474010 | 3:+77579576 | MsG0380015988.01.T01:CDS |
| GTTTGATCTCCATAGACATT+GGG | 0.475274 | 3:-77580164 | None:intergenic |
| AGGCAAGAGTAGCCTTCAAA+AGG | 0.476014 | 3:+77581654 | MsG0380015988.01.T01:three_prime_UTR |
| GCAAGTCAAGCCTTCTCCAC+TGG | 0.478246 | 3:-77581789 | None:intergenic |
| TGCTAACCTCTTGATAAGAT+CGG | 0.484839 | 3:-77580943 | None:intergenic |
| GCAGGCCCTTCACTTGGAGC+TGG | 0.485072 | 3:+77578410 | MsG0380015988.01.T01:CDS |
| CAAGTTTCCCTATCCTCGTA+GGG | 0.485796 | 3:+77579367 | MsG0380015988.01.T01:CDS |
| TCGGCAGGTAGTGCTTGGTC+GGG | 0.486620 | 3:-77580924 | None:intergenic |
| GACAAATCTCTATCACTGTA+AGG | 0.488602 | 3:-77581566 | None:intergenic |
| ATTAAAGCAGGCCCTTCACT+TGG | 0.488692 | 3:+77578404 | MsG0380015988.01.T01:CDS |
| ACTTTAAGGGGAGATGGAAC+AGG | 0.489102 | 3:+77579239 | MsG0380015988.01.T01:CDS |
| GGTTGTAGAAGCTTATGAAT+AGG | 0.489425 | 3:-77580762 | None:intergenic |
| CCTACGAGGATAGGGAAACT+TGG | 0.489743 | 3:-77579366 | None:intergenic |
| GCATCTTAACCGGGCCAGTT+CGG | 0.489800 | 3:-77581745 | None:intergenic |
| TATCACAAGGCGAAGTCCAT+GGG | 0.490697 | 3:-77581118 | None:intergenic |
| GTCCTAGTGGCATAAGACTT+TGG | 0.491486 | 3:-77580469 | None:intergenic |
| TTCACCAACTCATGAGTCAC+TGG | 0.491593 | 3:+77580674 | MsG0380015988.01.T01:CDS |
| TCATATGCATGTGTTATTTG+AGG | 0.492896 | 3:-77581994 | None:intergenic |
| TGATGGGACTTTAAAACCAT+TGG | 0.493571 | 3:+77580510 | MsG0380015988.01.T01:CDS |
| GGTTCTTCCCCTACGAGGAT+AGG | 0.494309 | 3:-77579375 | None:intergenic |
| TACATTTCTTTGCAACTCAT+GGG | 0.494808 | 3:+77578964 | MsG0380015988.01.T01:CDS |
| TATCCTCGTAGGGGAAGAAC+CGG | 0.497238 | 3:+77579377 | MsG0380015988.01.T01:CDS |
| ATCGGCAGGTAGTGCTTGGT+CGG | 0.497811 | 3:-77580925 | None:intergenic |
| CCAAGTTTCCCTATCCTCGT+AGG | 0.499485 | 3:+77579366 | MsG0380015988.01.T01:CDS |
| GAACAGGAATGCGTGAGGAA+TGG | 0.500039 | 3:+77579255 | MsG0380015988.01.T01:CDS |
| GATTTGAATGATATTAAAGC+AGG | 0.500960 | 3:+77578392 | MsG0380015988.01.T01:CDS |
| GGATGGGCTCACAGTAGAAA+AGG | 0.502461 | 3:+77580223 | MsG0380015988.01.T01:CDS |
| TGTTGATGGATTAGAGATAT+GGG | 0.503457 | 3:+77581158 | MsG0380015988.01.T01:CDS |
| TTTGCTTAACCGAACTGGCC+CGG | 0.506455 | 3:+77581736 | MsG0380015988.01.T01:three_prime_UTR |
| TTGGATACTTTAAGGGGAGA+TGG | 0.507834 | 3:+77579233 | MsG0380015988.01.T01:CDS |
| GACCAAACACTTCATCTCTT+GGG | 0.510760 | 3:-77579578 | None:intergenic |
| ACTCATGAGTTGGTGAAAGC+AGG | 0.511744 | 3:-77580668 | None:intergenic |
| TTTGCAAGAGAAATGCTTGC+TGG | 0.513602 | 3:+77579983 | MsG0380015988.01.T01:CDS |
| CTGAAGTTAACCAGTGGAGC+TGG | 0.514396 | 3:-77579200 | None:intergenic |
| CACTTGGAGATTAACATGGA+TGG | 0.517226 | 3:+77580206 | MsG0380015988.01.T01:CDS |
| TACAATAACAAAAGAACACT+TGG | 0.517945 | 3:+77580190 | MsG0380015988.01.T01:CDS |
| GGAAAAGAGAGAATGATGAA+TGG | 0.518496 | 3:+77581618 | MsG0380015988.01.T01:three_prime_UTR |
| ATTTACAACTACATAAGCCT+TGG | 0.519818 | 3:-77580641 | None:intergenic |
| TAGCCCCATTGCAATGGTAA+AGG | 0.519925 | 3:+77579770 | MsG0380015988.01.T01:CDS |
| TCGTCAATTGAATTCATCTC+AGG | 0.520997 | 3:-77581324 | None:intergenic |
| GTTCTTCCCCTACGAGGATA+GGG | 0.521362 | 3:-77579374 | None:intergenic |
| GATTTCCTTTACCATTGCAA+TGG | 0.524164 | 3:-77579775 | None:intergenic |
| GGATCTAGCTTGCTTTGGGG+TGG | 0.524788 | 3:-77580143 | None:intergenic |
| GGTTTGATCTCCATAGACAT+TGG | 0.526818 | 3:-77580165 | None:intergenic |
| CTATCACAAGGCGAAGTCCA+TGG | 0.527442 | 3:-77581119 | None:intergenic |
| ACCTCCTTGTCATAGTTGGT+CGG | 0.527472 | 3:-77581443 | None:intergenic |
| CCTTGAATGACATGGGGAGG+TGG | 0.527778 | 3:-77579831 | None:intergenic |
| AGGAGGTTAATTCCTGAAAA+GGG | 0.528440 | 3:+77581459 | MsG0380015988.01.T01:CDS |
| GAATTCAATTGACGAGTTGG+TGG | 0.528630 | 3:+77581332 | MsG0380015988.01.T01:CDS |
| GGCCTTGTTAGAGACGTTGT+TGG | 0.529037 | 3:+77578437 | MsG0380015988.01.T01:CDS |
| GGCATTTCATGTGGAAGGTA+TGG | 0.532327 | 3:-77579179 | None:intergenic |
| AATGCATCCTGTTGCTGCCA+AGG | 0.535090 | 3:-77578815 | None:intergenic |
| GGAAGGTAAAAGCAAAGTGT+AGG | 0.537525 | 3:-77581768 | None:intergenic |
| AACCTCTTGATAAGATCGGC+AGG | 0.537837 | 3:-77580939 | None:intergenic |
| TATTGTTCGCCATCTGGGTG+TGG | 0.538814 | 3:-77580550 | None:intergenic |
| AACCTTTCAATCCAAATCCA+AGG | 0.541856 | 3:-77579620 | None:intergenic |
| TGGAGGTGGCATTATAGAGC+AGG | 0.544535 | 3:+77580839 | MsG0380015988.01.T01:CDS |
| TAACACATGCATATGAACAT+TGG | 0.545178 | 3:+77582001 | MsG0380015988.01.T01:three_prime_UTR |
| AAGGAAATCTTCCGAACTGA+TGG | 0.545276 | 3:+77579789 | MsG0380015988.01.T01:CDS |
| GCTTCTGATGAAGTTTACCT+AGG | 0.546243 | 3:+77581596 | MsG0380015988.01.T01:CDS |
| GAAGTACGTTGCCTCTTCGA+AGG | 0.547214 | 3:+77579711 | MsG0380015988.01.T01:CDS |
| TCCTATTCTTGAAAGATGAT+GGG | 0.547660 | 3:+77580494 | MsG0380015988.01.T01:CDS |
| TTGGGATCTAGCTTGCTTTG+GGG | 0.548828 | 3:-77580146 | None:intergenic |
| AAACTTAGTTCGATGGCCAA+TGG | 0.549498 | 3:-77580526 | None:intergenic |
| AATTTCGGACAATATCCTTA+CGG | 0.550104 | 3:+77581405 | MsG0380015988.01.T01:CDS |
| CCAAATCCAGCTCCAAGTGA+AGG | 0.552173 | 3:-77578416 | None:intergenic |
| TGCTATTAGCCCCATTGCAA+TGG | 0.555439 | 3:+77579764 | MsG0380015988.01.T01:CDS |
| TGAATGGACAGCTGATGAAA+AGG | 0.557554 | 3:+77581634 | MsG0380015988.01.T01:three_prime_UTR |
| CTAATCCATCAACAGCAAAA+GGG | 0.562213 | 3:-77581149 | None:intergenic |
| ACATAGTTAGTATCAGCTGC+TGG | 0.563293 | 3:-77579555 | None:intergenic |
| CGGCAGGTAGTGCTTGGTCG+GGG | 0.563824 | 3:-77580923 | None:intergenic |
| TTGCAGCAACAATACTTGTA+GGG | 0.566778 | 3:-77581858 | None:intergenic |
| CAAGAATAGGATTGTCCTAG+TGG | 0.567428 | 3:-77580482 | None:intergenic |
| AAAAGAAGCAAAAGATTAAG+GGG | 0.567519 | 3:+77578339 | MsG0380015988.01.T01:CDS |
| TAAGATCGGCAGGTAGTGCT+TGG | 0.567570 | 3:-77580929 | None:intergenic |
| GTTGATGTGCAAGAATGCAT+TGG | 0.569271 | 3:+77578370 | MsG0380015988.01.T01:CDS |
| TGGAAAGAAGTCGTAGAGAT+CGG | 0.569928 | 3:+77581270 | MsG0380015988.01.T01:CDS |
| ATGGGATGCTATTAAGGCAT+GGG | 0.571991 | 3:+77581176 | MsG0380015988.01.T01:CDS |
| AAGTGTAGGGCATCTTAACC+GGG | 0.572310 | 3:-77581754 | None:intergenic |
| CATCCTGTTGCTGCCAAGGT+TGG | 0.577806 | 3:-77578811 | None:intergenic |
| ACTTGGAGATTAACATGGAT+GGG | 0.577979 | 3:+77580207 | MsG0380015988.01.T01:CDS |
| GATGAATTCAATTGACGAGT+TGG | 0.578441 | 3:+77581329 | MsG0380015988.01.T01:CDS |
| CTTCTGATGAAGTTTACCTA+GGG | 0.579278 | 3:+77581597 | MsG0380015988.01.T01:CDS |
| CTTGTTAGAGACGTTGTTGG+TGG | 0.579540 | 3:+77578440 | MsG0380015988.01.T01:CDS |
| TAGCAAACCTTGAATGACAT+GGG | 0.581902 | 3:-77579838 | None:intergenic |
| AGTTCATTGATCAGTGGAGG+TGG | 0.583364 | 3:+77580825 | MsG0380015988.01.T01:CDS |
| GAAGGTAAAAGCAAAGTGTA+GGG | 0.585152 | 3:-77581767 | None:intergenic |
| CACCAACAACGTCTCTAACA+AGG | 0.585280 | 3:-77578439 | None:intergenic |
| TGAACATCAATGCACTTGCT+CGG | 0.585440 | 3:+77580802 | MsG0380015988.01.T01:CDS |
| TTCAAGATTAAACCACCGTA+AGG | 0.588798 | 3:-77581420 | None:intergenic |
| GGAGAAGGCTTGACTTGCAG+AGG | 0.594409 | 3:+77581794 | MsG0380015988.01.T01:three_prime_UTR |
| CAAATCCAGCTCCAAGTGAA+GGG | 0.596599 | 3:-77578415 | None:intergenic |
| GAAGACATCTCAACAGCGTA+CGG | 0.596717 | 3:-77580876 | None:intergenic |
| CGGAGTTCATTGATCAGTGG+AGG | 0.597825 | 3:+77580822 | MsG0380015988.01.T01:CDS |
| GTGTGGCAAACTTAGTTCGA+TGG | 0.601953 | 3:-77580533 | None:intergenic |
| CTATCACTGTAAGGTCAATG+AGG | 0.603331 | 3:-77581557 | None:intergenic |
| TTCATTGTGTCGCGATAGTG+AGG | 0.604171 | 3:-77580783 | None:intergenic |
| TCAACCAGTGACTCATGAGT+TGG | 0.604385 | 3:-77580678 | None:intergenic |
| CTCCGAGAATTGGACGAGCA+AGG | 0.604855 | 3:-77579337 | None:intergenic |
| AATGTAATGGAATCATGACC+AGG | 0.605186 | 3:-77578947 | None:intergenic |
| TGAAGTCTTTGAATCACACA+TGG | 0.606497 | 3:-77580013 | None:intergenic |
| GCTATCTTAGGCCGTAGTGT+TGG | 0.606801 | 3:+77578482 | MsG0380015988.01.T01:CDS |
| GTCAAGCCTTCTCCACTGGA+AGG | 0.607236 | 3:-77581785 | None:intergenic |
| CTGCCGGTTCTTCCCCTACG+AGG | 0.609174 | 3:-77579380 | None:intergenic |
| CTTCAAGAGTTAAACTCACA+AGG | 0.611497 | 3:-77578919 | None:intergenic |
| TTACAGCTGATAAGTCTGCA+TGG | 0.612258 | 3:+77579945 | MsG0380015988.01.T01:intron |
| TTAACTCTTGAAGACATACC+TGG | 0.612617 | 3:+77578929 | MsG0380015988.01.T01:CDS |
| TATGGGATGCTATTAAGGCA+TGG | 0.612849 | 3:+77581175 | MsG0380015988.01.T01:CDS |
| ATAGCACTGATGATATCTGT+AGG | 0.618114 | 3:-77579747 | None:intergenic |
| AGTGGAGCTGGCATTTCATG+TGG | 0.620063 | 3:-77579188 | None:intergenic |
| TTAGCAAACCTTGAATGACA+TGG | 0.620644 | 3:-77579839 | None:intergenic |
| CTAAGTTTGCCACACCCAGA+TGG | 0.621788 | 3:+77580541 | MsG0380015988.01.T01:CDS |
| CAATGCAAAACAATATCGCA+AGG | 0.623439 | 3:+77578991 | MsG0380015988.01.T01:CDS |
| AAAGTGCTGTTGCCTCCAGA+AGG | 0.624021 | 3:+77580586 | MsG0380015988.01.T01:CDS |
| TGAACACCATGTCCTTCTGG+AGG | 0.624619 | 3:-77580598 | None:intergenic |
| CCAGATGCCAGTGCACCCCA+TGG | 0.626322 | 3:+77581102 | MsG0380015988.01.T01:CDS |
| AACAGGCAATTCTAGAAGAG+AGG | 0.629314 | 3:+77580383 | MsG0380015988.01.T01:intron |
| GAGCTGGCATTTCATGTGGA+AGG | 0.633380 | 3:-77579184 | None:intergenic |
| AGAACACTTGGAGATTAACA+TGG | 0.634190 | 3:+77580202 | MsG0380015988.01.T01:CDS |
| ACTGGTTAACTTCAGACATG+TGG | 0.635346 | 3:+77579208 | MsG0380015988.01.T01:CDS |
| CATGGGGAGGTGGATACTTG+AGG | 0.637216 | 3:-77579821 | None:intergenic |
| GTACGTTGCCTCTTCGAAGG+AGG | 0.639618 | 3:+77579714 | MsG0380015988.01.T01:CDS |
| ACAGTGATAGAGATTTGTCA+AGG | 0.640571 | 3:+77581570 | MsG0380015988.01.T01:CDS |
| TTCGGACAATATCCTTACGG+TGG | 0.640595 | 3:+77581408 | MsG0380015988.01.T01:CDS |
| AAACCTTGAATGACATGGGG+AGG | 0.640983 | 3:-77579834 | None:intergenic |
| TCAACTGGAGGCCAACACTA+CGG | 0.643629 | 3:-77578493 | None:intergenic |
| GAAGTCGTAGAGATCGGTCA+TGG | 0.645460 | 3:+77581276 | MsG0380015988.01.T01:CDS |
| GAATTCATCTCAGGCCACCA+AGG | 0.645647 | 3:-77581315 | None:intergenic |
| TGGTGGCACTGATCAACTGG+AGG | 0.646482 | 3:-77578505 | None:intergenic |
| GTGGAATTGGATACTTTAAG+GGG | 0.647460 | 3:+77579227 | MsG0380015988.01.T01:CDS |
| GCTCGGAGTTCATTGATCAG+TGG | 0.652807 | 3:+77580819 | MsG0380015988.01.T01:CDS |
| TACCTGCCGATCTTATCAAG+AGG | 0.656004 | 3:+77580937 | MsG0380015988.01.T01:CDS |
| AGTATGACATGAATGCGTCA+TGG | 0.657704 | 3:-77580423 | None:intergenic |
| AACAATCACACCAAAGACTG+AGG | 0.657990 | 3:+77581533 | MsG0380015988.01.T01:CDS |
| AGATGGAACAGGAATGCGTG+AGG | 0.658885 | 3:+77579250 | MsG0380015988.01.T01:CDS |
| TATCACTGTAAGGTCAATGA+GGG | 0.659038 | 3:-77581556 | None:intergenic |
| TTCCAAAGTCTTATGCCACT+AGG | 0.660834 | 3:+77580467 | MsG0380015988.01.T01:CDS |
| GCTTAACTCCTCCTTCGAAG+AGG | 0.670395 | 3:-77579722 | None:intergenic |
| CTGTTGCCTCCAGAAGGACA+TGG | 0.671292 | 3:+77580592 | MsG0380015988.01.T01:CDS |
| AAGTTTCCCTATCCTCGTAG+GGG | 0.672039 | 3:+77579368 | MsG0380015988.01.T01:CDS |
| ACATGTCTGAAGTTAACCAG+TGG | 0.674520 | 3:-77579206 | None:intergenic |
| AAGGGTAGTCTTCTATCACA+AGG | 0.675709 | 3:-77581131 | None:intergenic |
| CTTGCTCGTCCAATTCTCGG+AGG | 0.677885 | 3:+77579338 | MsG0380015988.01.T01:CDS |
| AGCAAACCTTGAATGACATG+GGG | 0.687046 | 3:-77579837 | None:intergenic |
| GTCCGAAATTGACAGCTGCG+TGG | 0.691842 | 3:-77581392 | None:intergenic |
| ATCACAAGGCGAAGTCCATG+GGG | 0.703789 | 3:-77581117 | None:intergenic |
| TGAACCGACCAACTATGACA+AGG | 0.714882 | 3:+77581439 | MsG0380015988.01.T01:CDS |
| TTTCCTTTACCATTGCAATG+GGG | 0.726202 | 3:-77579773 | None:intergenic |
| CTTGTACTACAAGACAGACG+TGG | 0.730806 | 3:+77581215 | MsG0380015988.01.T01:CDS |
| ACCGACCAACTATGACAAGG+AGG | 0.766347 | 3:+77581442 | MsG0380015988.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTAATTATTATTTT+AGG | + | Chr3:77578731-77578750 | MsG0380015988.01.T01:intron | 0.0% |
| !!! | ATGTATAAATCTTTTTTTAA+CGG | - | Chr3:77578617-77578636 | None:intergenic | 10.0% |
| !!! | TTAATTATTATTTTAGGAAT+GGG | + | Chr3:77578737-77578756 | MsG0380015988.01.T01:intron | 10.0% |
| !!! | TTTAATTATTATTTTAGGAA+TGG | + | Chr3:77578736-77578755 | MsG0380015988.01.T01:intron | 10.0% |
| !! | AGTATAACGAAAAAATATAA+AGG | - | Chr3:77578576-77578595 | None:intergenic | 15.0% |
| !! | ATATATGTGTATTGTATTAA+AGG | + | Chr3:77580249-77580268 | MsG0380015988.01.T01:intron | 15.0% |
| !!! | ATTCAATGTTTTTTTTGAAT+GGG | + | Chr3:77578835-77578854 | MsG0380015988.01.T01:CDS | 15.0% |
| !! | AAAAAGAAGCAAAAGATTAA+GGG | + | Chr3:77578338-77578357 | MsG0380015988.01.T01:CDS | 20.0% |
| !! | AATTTGTATTCATTTACTTG+TGG | + | Chr3:77580360-77580379 | MsG0380015988.01.T01:intron | 20.0% |
| !! | ATGACACAATTAATTAAACA+AGG | - | Chr3:77579117-77579136 | None:intergenic | 20.0% |
| !! | GAAAAAAAAAATGTCATATG+AGG | - | Chr3:77580093-77580112 | None:intergenic | 20.0% |
| !! | TATGATGTTTACAATGATTT+AGG | + | Chr3:77579293-77579312 | MsG0380015988.01.T01:CDS | 20.0% |
| !! | TCAAAAAAATTGCGAAATTT+AGG | - | Chr3:77579663-77579682 | None:intergenic | 20.0% |
| !! | TTTGATTCCAAAGTTAAATT+TGG | - | Chr3:77579058-77579077 | None:intergenic | 20.0% |
| !!! | CATTCAATGTTTTTTTTGAA+TGG | + | Chr3:77578834-77578853 | MsG0380015988.01.T01:CDS | 20.0% |
| !!! | CATTTTATTTGATCATAAAC+AGG | - | Chr3:77582045-77582064 | None:intergenic | 20.0% |
| !!! | TTTTGCTTCTTTTTGAAAAT+GGG | - | Chr3:77578332-77578351 | None:intergenic | 20.0% |
| ! | AAAAGAAGCAAAAGATTAAG+GGG | + | Chr3:77578339-77578358 | MsG0380015988.01.T01:CDS | 25.0% |
| ! | ACCTATCATTCATTAATCAA+CGG | - | Chr3:77580119-77580138 | None:intergenic | 25.0% |
| ! | CAAAAAGAAGCAAAAGATTA+AGG | + | Chr3:77578337-77578356 | MsG0380015988.01.T01:CDS | 25.0% |
| ! | GATTTGAATGATATTAAAGC+AGG | + | Chr3:77578392-77578411 | MsG0380015988.01.T01:CDS | 25.0% |
| ! | TACAATAACAAAAGAACACT+TGG | + | Chr3:77580190-77580209 | MsG0380015988.01.T01:CDS | 25.0% |
| !! | AAGATTATTACTGTCAGTTT+TGG | - | Chr3:77578528-77578547 | None:intergenic | 25.0% |
| !! | ACAAGTACCAAATTTAACTT+TGG | + | Chr3:77579048-77579067 | MsG0380015988.01.T01:intron | 25.0% |
| !! | GTTGATCAAATGTTGTATTT+TGG | + | Chr3:77581938-77581957 | MsG0380015988.01.T01:three_prime_UTR | 25.0% |
| !! | TTTGAATGGGATAATGATTT+TGG | + | Chr3:77578848-77578867 | MsG0380015988.01.T01:CDS | 25.0% |
| !! | TTTTAAGCTCAAAAAAAGTC+TGG | + | Chr3:77579082-77579101 | MsG0380015988.01.T01:intron | 25.0% |
| !! | TTTTTAATGTAAAATGCTCC+TGG | - | Chr3:77578878-77578897 | None:intergenic | 25.0% |
| !!! | ACATCTTGAATGATTTTGAT+TGG | - | Chr3:77578307-77578326 | None:intergenic | 25.0% |
| !!! | ATTATTTTAGGAATGGGAAA+TGG | + | Chr3:77578743-77578762 | MsG0380015988.01.T01:intron | 25.0% |
| !!! | CTTTTGCTTCTTTTTGAAAA+TGG | - | Chr3:77578333-77578352 | None:intergenic | 25.0% |
| AACCAAAGAATATGCAGAAA+TGG | + | Chr3:77581482-77581501 | MsG0380015988.01.T01:CDS | 30.0% | |
| AATTTCGGACAATATCCTTA+CGG | + | Chr3:77581405-77581424 | MsG0380015988.01.T01:CDS | 30.0% | |
| AGTCTTGCTCAATAATCATA+TGG | + | Chr3:77581355-77581374 | MsG0380015988.01.T01:CDS | 30.0% | |
| ATAAAAAGCCGTTGATATGT+CGG | - | Chr3:77578683-77578702 | None:intergenic | 30.0% | |
| ATCATAAAAATAAGCCTTGG+TGG | + | Chr3:77581301-77581320 | MsG0380015988.01.T01:CDS | 30.0% | |
| ATCATTCATTAATCAACGGA+AGG | - | Chr3:77580115-77580134 | None:intergenic | 30.0% | |
| ATCCTATTCTTGAAAGATGA+TGG | + | Chr3:77580493-77580512 | MsG0380015988.01.T01:CDS | 30.0% | |
| ATGGTGTTCAAAGAACAATT+TGG | + | Chr3:77580611-77580630 | MsG0380015988.01.T01:CDS | 30.0% | |
| ATGTGGAATTGGATACTTTA+AGG | + | Chr3:77579225-77579244 | MsG0380015988.01.T01:CDS | 30.0% | |
| ATTTACAACTACATAAGCCT+TGG | - | Chr3:77580644-77580663 | None:intergenic | 30.0% | |
| ATTTCCTTTACCATTGCAAT+GGG | - | Chr3:77579777-77579796 | None:intergenic | 30.0% | |
| CAAATTCGATAAACATCAAG+AGG | - | Chr3:77580346-77580365 | None:intergenic | 30.0% | |
| CCTTATTGGCAAAGAAAATT+CGG | - | Chr3:77579018-77579037 | None:intergenic | 30.0% | |
| GTGATCATAAAAATAAGCCT+TGG | + | Chr3:77581298-77581317 | MsG0380015988.01.T01:CDS | 30.0% | |
| TAACACATGCATATGAACAT+TGG | + | Chr3:77582001-77582020 | MsG0380015988.01.T01:three_prime_UTR | 30.0% | |
| TACATTTCTTTGCAACTCAT+GGG | + | Chr3:77578964-77578983 | MsG0380015988.01.T01:CDS | 30.0% | |
| TATTCATTTACTTGTGGAAC+AGG | + | Chr3:77580366-77580385 | MsG0380015988.01.T01:intron | 30.0% | |
| TCAAAGAACAATTTGGCAAT+TGG | + | Chr3:77580618-77580637 | MsG0380015988.01.T01:CDS | 30.0% | |
| TCCTATTCTTGAAAGATGAT+GGG | + | Chr3:77580494-77580513 | MsG0380015988.01.T01:CDS | 30.0% | |
| TGAGTTGCAAAGAAATGTAA+TGG | - | Chr3:77578963-77578982 | None:intergenic | 30.0% | |
| TGTGGAATTGGATACTTTAA+GGG | + | Chr3:77579226-77579245 | MsG0380015988.01.T01:CDS | 30.0% | |
| TTAATTAAACAAGGTGCGTT+TGG | - | Chr3:77579108-77579127 | None:intergenic | 30.0% | |
| TTACATTTCTTTGCAACTCA+TGG | + | Chr3:77578963-77578982 | MsG0380015988.01.T01:CDS | 30.0% | |
| TTGTAACGTTGTTACCTTAT+TGG | - | Chr3:77579032-77579051 | None:intergenic | 30.0% | |
| TTGTTCTCAAATAAGCTCTT+TGG | - | Chr3:77581518-77581537 | None:intergenic | 30.0% | |
| ! | ACTAACTAACTAACCTGTTT+TGG | - | Chr3:77579414-77579433 | None:intergenic | 30.0% |
| ! | AGAAGAGAGGTTATTCATTT+TGG | + | Chr3:77580396-77580415 | MsG0380015988.01.T01:CDS | 30.0% |
| ! | TATCGTTTTGCTTCATTTAG+AGG | + | Chr3:77581069-77581088 | MsG0380015988.01.T01:intron | 30.0% |
| ! | TCCGTTGATTAATGAATGAT+AGG | + | Chr3:77580115-77580134 | MsG0380015988.01.T01:intron | 30.0% |
| ! | TTTTGCTTCATTTAGAGGAA+TGG | + | Chr3:77581074-77581093 | MsG0380015988.01.T01:intron | 30.0% |
| !! | ATTATTACTGTCAGTTTTGG+TGG | - | Chr3:77578525-77578544 | None:intergenic | 30.0% |
| !! | TCATATGCATGTGTTATTTG+AGG | - | Chr3:77581997-77582016 | None:intergenic | 30.0% |
| !! | TGTTGATGGATTAGAGATAT+GGG | + | Chr3:77581158-77581177 | MsG0380015988.01.T01:CDS | 30.0% |
| !!! | GATAATGATTTTGGAATTCC+AGG | + | Chr3:77578857-77578876 | MsG0380015988.01.T01:CDS | 30.0% |
| !!! | GTGTTCTTTTGTTATTGTAC+TGG | - | Chr3:77580189-77580208 | None:intergenic | 30.0% |
| AACCTTTCAATCCAAATCCA+AGG | - | Chr3:77579623-77579642 | None:intergenic | 35.0% | |
| AAGGAGGTTAATTCCTGAAA+AGG | + | Chr3:77581458-77581477 | MsG0380015988.01.T01:CDS | 35.0% | |
| ACAGTGATAGAGATTTGTCA+AGG | + | Chr3:77581570-77581589 | MsG0380015988.01.T01:CDS | 35.0% | |
| ACTTGGAGATTAACATGGAT+GGG | + | Chr3:77580207-77580226 | MsG0380015988.01.T01:CDS | 35.0% | |
| AGAACACTTGGAGATTAACA+TGG | + | Chr3:77580202-77580221 | MsG0380015988.01.T01:CDS | 35.0% | |
| AGAGATATGGGATGCTATTA+AGG | + | Chr3:77581170-77581189 | MsG0380015988.01.T01:CDS | 35.0% | |
| AGGAGGTTAATTCCTGAAAA+GGG | + | Chr3:77581459-77581478 | MsG0380015988.01.T01:CDS | 35.0% | |
| ATTAACCTCCTTGTCATAGT+TGG | - | Chr3:77581450-77581469 | None:intergenic | 35.0% | |
| CAAAAGGTTTGCAAAGAAGA+TGG | + | Chr3:77581670-77581689 | MsG0380015988.01.T01:three_prime_UTR | 35.0% | |
| CAATGCAAAACAATATCGCA+AGG | + | Chr3:77578991-77579010 | MsG0380015988.01.T01:CDS | 35.0% | |
| CATGTAAGTAAACTCGTTAG+AGG | - | Chr3:77581046-77581065 | None:intergenic | 35.0% | |
| CCATTCATCATAGCTACAAT+AGG | + | Chr3:77580721-77580740 | MsG0380015988.01.T01:intron | 35.0% | |
| CCTATTGTAGCTATGATGAA+TGG | - | Chr3:77580724-77580743 | None:intergenic | 35.0% | |
| CCTTAGATAGACACACTATT+GGG | - | Chr3:77581824-77581843 | None:intergenic | 35.0% | |
| CTAATCCATCAACAGCAAAA+GGG | - | Chr3:77581152-77581171 | None:intergenic | 35.0% | |
| CTCCATTTCTGCATATTCTT+TGG | - | Chr3:77581487-77581506 | None:intergenic | 35.0% | |
| CTTCAAGAGTTAAACTCACA+AGG | - | Chr3:77578922-77578941 | None:intergenic | 35.0% | |
| CTTCTGATGAAGTTTACCTA+GGG | + | Chr3:77581597-77581616 | MsG0380015988.01.T01:CDS | 35.0% | |
| GAAGGTAAAAGCAAAGTGTA+GGG | - | Chr3:77581770-77581789 | None:intergenic | 35.0% | |
| GACAAATCTCTATCACTGTA+AGG | - | Chr3:77581569-77581588 | None:intergenic | 35.0% | |
| GATGAATTCAATTGACGAGT+TGG | + | Chr3:77581329-77581348 | MsG0380015988.01.T01:CDS | 35.0% | |
| GATTTCCTTTACCATTGCAA+TGG | - | Chr3:77579778-77579797 | None:intergenic | 35.0% | |
| GGAAAAGAGAGAATGATGAA+TGG | + | Chr3:77581618-77581637 | MsG0380015988.01.T01:three_prime_UTR | 35.0% | |
| GGTTGTAGAAGCTTATGAAT+AGG | - | Chr3:77580765-77580784 | None:intergenic | 35.0% | |
| GTGGAATTGGATACTTTAAG+GGG | + | Chr3:77579227-77579246 | MsG0380015988.01.T01:CDS | 35.0% | |
| GTTTGATCTCCATAGACATT+GGG | - | Chr3:77580167-77580186 | None:intergenic | 35.0% | |
| TAAAAAGCCGTTGATATGTC+GGG | - | Chr3:77578682-77578701 | None:intergenic | 35.0% | |
| TAACTTCAGACATGTGGAAT+TGG | + | Chr3:77579214-77579233 | MsG0380015988.01.T01:CDS | 35.0% | |
| TAGCAAACCTTGAATGACAT+GGG | - | Chr3:77579841-77579860 | None:intergenic | 35.0% | |
| TATCACTGTAAGGTCAATGA+GGG | - | Chr3:77581559-77581578 | None:intergenic | 35.0% | |
| TCCCATCATCTTTCAAGAAT+AGG | - | Chr3:77580498-77580517 | None:intergenic | 35.0% | |
| TCCTTAGATAGACACACTAT+TGG | - | Chr3:77581825-77581844 | None:intergenic | 35.0% | |
| TCGTCAATTGAATTCATCTC+AGG | - | Chr3:77581327-77581346 | None:intergenic | 35.0% | |
| TCTAATCCATCAACAGCAAA+AGG | - | Chr3:77581153-77581172 | None:intergenic | 35.0% | |
| TGAAGTCTTTGAATCACACA+TGG | - | Chr3:77580016-77580035 | None:intergenic | 35.0% | |
| TGCTAACCTCTTGATAAGAT+CGG | - | Chr3:77580946-77580965 | None:intergenic | 35.0% | |
| TTAACTCTTGAAGACATACC+TGG | + | Chr3:77578929-77578948 | MsG0380015988.01.T01:CDS | 35.0% | |
| TTAGCAAACCTTGAATGACA+TGG | - | Chr3:77579842-77579861 | None:intergenic | 35.0% | |
| TTCAAGATTAAACCACCGTA+AGG | - | Chr3:77581423-77581442 | None:intergenic | 35.0% | |
| TTCCTTGGATTTGGATTGAA+AGG | + | Chr3:77579618-77579637 | MsG0380015988.01.T01:CDS | 35.0% | |
| TTCTGCAGTTTACAAGGATT+GGG | + | Chr3:77580896-77580915 | MsG0380015988.01.T01:CDS | 35.0% | |
| TTGCAGCAACAATACTTGTA+GGG | - | Chr3:77581861-77581880 | None:intergenic | 35.0% | |
| TTTCCTTTACCATTGCAATG+GGG | - | Chr3:77579776-77579795 | None:intergenic | 35.0% | |
| ! | AATGTAATGGAATCATGACC+AGG | - | Chr3:77578950-77578969 | None:intergenic | 35.0% |
| ! | CCGAATTTTCTTTGCCAATA+AGG | + | Chr3:77579015-77579034 | MsG0380015988.01.T01:CDS | 35.0% |
| ! | CTTCTTTGCAAACCTTTTGA+AGG | - | Chr3:77581669-77581688 | None:intergenic | 35.0% |
| ! | GGAAATTTTCACCATCAGTT+CGG | - | Chr3:77579803-77579822 | None:intergenic | 35.0% |
| !! | ATAGCACTGATGATATCTGT+AGG | - | Chr3:77579750-77579769 | None:intergenic | 35.0% |
| !! | CTGTTGATGGATTAGAGATA+TGG | + | Chr3:77581157-77581176 | MsG0380015988.01.T01:CDS | 35.0% |
| !! | TATTCTTTGGTTCCCTTTTC+AGG | - | Chr3:77581474-77581493 | None:intergenic | 35.0% |
| !! | TGATGGGACTTTAAAACCAT+TGG | + | Chr3:77580510-77580529 | MsG0380015988.01.T01:CDS | 35.0% |
| !!! | ACTAACTAACCTGTTTTGGT+AGG | - | Chr3:77579410-77579429 | None:intergenic | 35.0% |
| AAACTTAGTTCGATGGCCAA+TGG | - | Chr3:77580529-77580548 | None:intergenic | 40.0% | |
| AACAATCACACCAAAGACTG+AGG | + | Chr3:77581533-77581552 | MsG0380015988.01.T01:CDS | 40.0% | |
| AACAATTTGGCAATTGGCCA+AGG | + | Chr3:77580624-77580643 | MsG0380015988.01.T01:CDS | 40.0% | |
| AAGCTAGATCCCAATGTCTA+TGG | + | Chr3:77580155-77580174 | MsG0380015988.01.T01:CDS | 40.0% | |
| AAGGAAATCTTCCGAACTGA+TGG | + | Chr3:77579789-77579808 | MsG0380015988.01.T01:CDS | 40.0% | |
| AAGGGTAGTCTTCTATCACA+AGG | - | Chr3:77581134-77581153 | None:intergenic | 40.0% | |
| ACATAGTTAGTATCAGCTGC+TGG | - | Chr3:77579558-77579577 | None:intergenic | 40.0% | |
| ACTGGTTAACTTCAGACATG+TGG | + | Chr3:77579208-77579227 | MsG0380015988.01.T01:CDS | 40.0% | |
| AGCAAACCTTGAATGACATG+GGG | - | Chr3:77579840-77579859 | None:intergenic | 40.0% | |
| AGTATGACATGAATGCGTCA+TGG | - | Chr3:77580426-77580445 | None:intergenic | 40.0% | |
| ATGGGATGCTATTAAGGCAT+GGG | + | Chr3:77581176-77581195 | MsG0380015988.01.T01:CDS | 40.0% | |
| CAAGAATAGGATTGTCCTAG+TGG | - | Chr3:77580485-77580504 | None:intergenic | 40.0% | |
| CACTTGGAGATTAACATGGA+TGG | + | Chr3:77580206-77580225 | MsG0380015988.01.T01:CDS | 40.0% | |
| CCCAATAGTGTGTCTATCTA+AGG | + | Chr3:77581821-77581840 | MsG0380015988.01.T01:three_prime_UTR | 40.0% | |
| CGACTTCTTTCCAAAACTCT+TGG | - | Chr3:77581263-77581282 | None:intergenic | 40.0% | |
| CTATCACTGTAAGGTCAATG+AGG | - | Chr3:77581560-77581579 | None:intergenic | 40.0% | |
| CTTCTGCAGTTTACAAGGAT+TGG | + | Chr3:77580895-77580914 | MsG0380015988.01.T01:CDS | 40.0% | |
| GACCAAACACTTCATCTCTT+GGG | - | Chr3:77579581-77579600 | None:intergenic | 40.0% | |
| GATGTCTTCTGCAGTTTACA+AGG | + | Chr3:77580890-77580909 | MsG0380015988.01.T01:CDS | 40.0% | |
| GCTTCTGATGAAGTTTACCT+AGG | + | Chr3:77581596-77581615 | MsG0380015988.01.T01:CDS | 40.0% | |
| GGAAGGTAAAAGCAAAGTGT+AGG | - | Chr3:77581771-77581790 | None:intergenic | 40.0% | |
| GGTTTGATCTCCATAGACAT+TGG | - | Chr3:77580168-77580187 | None:intergenic | 40.0% | |
| GTTGATGTGCAAGAATGCAT+TGG | + | Chr3:77578370-77578389 | MsG0380015988.01.T01:CDS | 40.0% | |
| GTTGCAGCAACAATACTTGT+AGG | - | Chr3:77581862-77581881 | None:intergenic | 40.0% | |
| TATGGGATGCTATTAAGGCA+TGG | + | Chr3:77581175-77581194 | MsG0380015988.01.T01:CDS | 40.0% | |
| TGAACATCAATGCACTTGCT+CGG | + | Chr3:77580802-77580821 | MsG0380015988.01.T01:CDS | 40.0% | |
| TGAATGGACAGCTGATGAAA+AGG | + | Chr3:77581634-77581653 | MsG0380015988.01.T01:three_prime_UTR | 40.0% | |
| TGACCAAACACTTCATCTCT+TGG | - | Chr3:77579582-77579601 | None:intergenic | 40.0% | |
| TGGAAAGAAGTCGTAGAGAT+CGG | + | Chr3:77581270-77581289 | MsG0380015988.01.T01:CDS | 40.0% | |
| TGTTGGAGATCAGTTCTTTC+TGG | + | Chr3:77578769-77578788 | MsG0380015988.01.T01:CDS | 40.0% | |
| TTACAGCTGATAAGTCTGCA+TGG | + | Chr3:77579945-77579964 | MsG0380015988.01.T01:intron | 40.0% | |
| TTTGCAAGAGAAATGCTTGC+TGG | + | Chr3:77579983-77580002 | MsG0380015988.01.T01:CDS | 40.0% | |
| ! | AAAGTGTAGGGCATCTTAAC+CGG | - | Chr3:77581758-77581777 | None:intergenic | 40.0% |
| ! | AACAGGCAATTCTAGAAGAG+AGG | + | Chr3:77580383-77580402 | MsG0380015988.01.T01:intron | 40.0% |
| ! | ACATGTCTGAAGTTAACCAG+TGG | - | Chr3:77579209-77579228 | None:intergenic | 40.0% |
| ! | CATCATTCTCTCTTTTCCCT+AGG | - | Chr3:77581616-77581635 | None:intergenic | 40.0% |
| ! | CGGCTTTTTATTGTTACGCA+AGG | + | Chr3:77578692-77578711 | MsG0380015988.01.T01:intron | 40.0% |
| ! | GAATTCAATTGACGAGTTGG+TGG | + | Chr3:77581332-77581351 | MsG0380015988.01.T01:CDS | 40.0% |
| ! | GGAATGGGAAATGGATTTGT+TGG | + | Chr3:77578752-77578771 | MsG0380015988.01.T01:intron | 40.0% |
| ! | GTGTTCCATTTTACCAACCT+TGG | + | Chr3:77578798-77578817 | MsG0380015988.01.T01:CDS | 40.0% |
| ! | TTCCAAAGTCTTATGCCACT+AGG | + | Chr3:77580467-77580486 | MsG0380015988.01.T01:CDS | 40.0% |
| ! | TTGGATACTTTAAGGGGAGA+TGG | + | Chr3:77579233-77579252 | MsG0380015988.01.T01:CDS | 40.0% |
| !! | ACTTTGCTTTTACCTTCCAG+TGG | + | Chr3:77581773-77581792 | MsG0380015988.01.T01:three_prime_UTR | 40.0% |
| !! | ATTGGGATCTAGCTTGCTTT+GGG | - | Chr3:77580150-77580169 | None:intergenic | 40.0% |
| !! | GTGGCATAAGACTTTGGAAT+AGG | - | Chr3:77580466-77580485 | None:intergenic | 40.0% |
| !! | GTTGTTGGTGGTGTTATTGA+TGG | + | Chr3:77578452-77578471 | MsG0380015988.01.T01:CDS | 40.0% |
| !!! | TGTTTTGGTAGGTTTTCTGC+CGG | - | Chr3:77579399-77579418 | None:intergenic | 40.0% |
| !!! | TTTTGGTGTTCTAGAGTCTG+TGG | + | Chr3:77581955-77581974 | MsG0380015988.01.T01:three_prime_UTR | 40.0% |
| AAACCTTGAATGACATGGGG+AGG | - | Chr3:77579837-77579856 | None:intergenic | 45.0% | |
| AACAGGAATGCGTGAGGAAT+GGG | + | Chr3:77579256-77579275 | MsG0380015988.01.T01:CDS | 45.0% | |
| AACCTCTTGATAAGATCGGC+AGG | - | Chr3:77580942-77580961 | None:intergenic | 45.0% | |
| AAGTTTCCCTATCCTCGTAG+GGG | + | Chr3:77579368-77579387 | MsG0380015988.01.T01:CDS | 45.0% | |
| ACCTCCTTGTCATAGTTGGT+CGG | - | Chr3:77581446-77581465 | None:intergenic | 45.0% | |
| AGGCAAGAGTAGCCTTCAAA+AGG | + | Chr3:77581654-77581673 | MsG0380015988.01.T01:three_prime_UTR | 45.0% | |
| AGTTCATTGATCAGTGGAGG+TGG | + | Chr3:77580825-77580844 | MsG0380015988.01.T01:CDS | 45.0% | |
| ATTAAAGCAGGCCCTTCACT+TGG | + | Chr3:77578404-77578423 | MsG0380015988.01.T01:CDS | 45.0% | |
| CAAATCCAGCTCCAAGTGAA+GGG | - | Chr3:77578418-77578437 | None:intergenic | 45.0% | |
| CAAGTTTCCCTATCCTCGTA+GGG | + | Chr3:77579367-77579386 | MsG0380015988.01.T01:CDS | 45.0% | |
| CACCAACAACGTCTCTAACA+AGG | - | Chr3:77578442-77578461 | None:intergenic | 45.0% | |
| CCAGTTCGGTTAAGCAAATC+TGG | - | Chr3:77581734-77581753 | None:intergenic | 45.0% | |
| CTACAATAGGTGTCTCAGTG+TGG | + | Chr3:77580734-77580753 | MsG0380015988.01.T01:intron | 45.0% | |
| CTCAGATCCCGACATATCAA+CGG | + | Chr3:77578672-77578691 | MsG0380015988.01.T01:intron | 45.0% | |
| CTCCATATTGTTCGCCATCT+GGG | - | Chr3:77580558-77580577 | None:intergenic | 45.0% | |
| CTTGTACTACAAGACAGACG+TGG | + | Chr3:77581215-77581234 | MsG0380015988.01.T01:CDS | 45.0% | |
| CTTGTTAGAGACGTTGTTGG+TGG | + | Chr3:77578440-77578459 | MsG0380015988.01.T01:CDS | 45.0% | |
| CTTTGAACACCATGTCCTTC+TGG | - | Chr3:77580604-77580623 | None:intergenic | 45.0% | |
| GAAGACATCTCAACAGCGTA+CGG | - | Chr3:77580879-77580898 | None:intergenic | 45.0% | |
| GAATGGCTCAATCACGCAAT+GGG | - | Chr3:77580707-77580726 | None:intergenic | 45.0% | |
| GGCAGAAAACCTACCAAAAC+AGG | + | Chr3:77579398-77579417 | MsG0380015988.01.T01:CDS | 45.0% | |
| GGCATTTCATGTGGAAGGTA+TGG | - | Chr3:77579182-77579201 | None:intergenic | 45.0% | |
| GTCCTAGTGGCATAAGACTT+TGG | - | Chr3:77580472-77580491 | None:intergenic | 45.0% | |
| GTGTGGCAAACTTAGTTCGA+TGG | - | Chr3:77580536-77580555 | None:intergenic | 45.0% | |
| TACCTGCCGATCTTATCAAG+AGG | + | Chr3:77580937-77580956 | MsG0380015988.01.T01:CDS | 45.0% | |
| TAGCCCCATTGCAATGGTAA+AGG | + | Chr3:77579770-77579789 | MsG0380015988.01.T01:CDS | 45.0% | |
| TATCACAAGGCGAAGTCCAT+GGG | - | Chr3:77581121-77581140 | None:intergenic | 45.0% | |
| TCAACCAGTGACTCATGAGT+TGG | - | Chr3:77580681-77580700 | None:intergenic | 45.0% | |
| TGAACCGACCAACTATGACA+AGG | + | Chr3:77581439-77581458 | MsG0380015988.01.T01:CDS | 45.0% | |
| TGAATGGCTCAATCACGCAA+TGG | - | Chr3:77580708-77580727 | None:intergenic | 45.0% | |
| TGCTATTAGCCCCATTGCAA+TGG | + | Chr3:77579764-77579783 | MsG0380015988.01.T01:CDS | 45.0% | |
| TTCACCAACTCATGAGTCAC+TGG | + | Chr3:77580674-77580693 | MsG0380015988.01.T01:CDS | 45.0% | |
| TTCATTGTGTCGCGATAGTG+AGG | - | Chr3:77580786-77580805 | None:intergenic | 45.0% | |
| TTCCAAAACTCTTGGAGCTC+TGG | - | Chr3:77581255-77581274 | None:intergenic | 45.0% | |
| TTCCACGCAGCTGTCAATTT+CGG | + | Chr3:77581390-77581409 | MsG0380015988.01.T01:CDS | 45.0% | |
| TTCGGACAATATCCTTACGG+TGG | + | Chr3:77581408-77581427 | MsG0380015988.01.T01:CDS | 45.0% | |
| TTGGAAGAACCTCCGAGAAT+TGG | - | Chr3:77579350-77579369 | None:intergenic | 45.0% | |
| ! | AAGTGTAGGGCATCTTAACC+GGG | - | Chr3:77581757-77581776 | None:intergenic | 45.0% |
| ! | ACTTTAAGGGGAGATGGAAC+AGG | + | Chr3:77579239-77579258 | MsG0380015988.01.T01:CDS | 45.0% |
| ! | ATAGAGCAGGCATTTTTGCC+AGG | + | Chr3:77580852-77580871 | MsG0380015988.01.T01:CDS | 45.0% |
| ! | ATCCAGAGCTCCAAGAGTTT+TGG | + | Chr3:77581250-77581269 | MsG0380015988.01.T01:CDS | 45.0% |
| ! | CAAGCTGACTTCCTTGGATT+TGG | + | Chr3:77579609-77579628 | MsG0380015988.01.T01:CDS | 45.0% |
| ! | CCAGATTTGCTTAACCGAAC+TGG | + | Chr3:77581731-77581750 | MsG0380015988.01.T01:three_prime_UTR | 45.0% |
| ! | CTTTTACCTTCCAGTGGAGA+AGG | + | Chr3:77581779-77581798 | MsG0380015988.01.T01:three_prime_UTR | 45.0% |
| ! | GTCCCAAGAGATGAAGTGTT+TGG | + | Chr3:77579576-77579595 | MsG0380015988.01.T01:CDS | 45.0% |
| ! | TTGAAGCAAGCTGACTTCCT+TGG | + | Chr3:77579603-77579622 | MsG0380015988.01.T01:CDS | 45.0% |
| !! | ACTCATGAGTTGGTGAAAGC+AGG | - | Chr3:77580671-77580690 | None:intergenic | 45.0% |
| !! | CATTGGGATCTAGCTTGCTT+TGG | - | Chr3:77580151-77580170 | None:intergenic | 45.0% |
| !! | GAGCTCTGGATCTCTTTGAA+TGG | - | Chr3:77581241-77581260 | None:intergenic | 45.0% |
| !! | GATGGTGCTACTGCTATCTT+AGG | + | Chr3:77578470-77578489 | MsG0380015988.01.T01:CDS | 45.0% |
| !! | TGCTGCCAAGGTTGGTAAAA+TGG | - | Chr3:77578806-77578825 | None:intergenic | 45.0% |
| !! | TTGGGATCTAGCTTGCTTTG+GGG | - | Chr3:77580149-77580168 | None:intergenic | 45.0% |
| !!! | GACTACCCTTTTGCTGTTGA+TGG | + | Chr3:77581144-77581163 | MsG0380015988.01.T01:CDS | 45.0% |
| !!! | TTTTGGTGGCACTGATCAAC+TGG | - | Chr3:77578511-77578530 | None:intergenic | 45.0% |
| AATGCATCCTGTTGCTGCCA+AGG | - | Chr3:77578818-77578837 | None:intergenic | 50.0% | |
| ACATGAAATGCCAGCTCCAC+TGG | + | Chr3:77579190-77579209 | MsG0380015988.01.T01:CDS | 50.0% | |
| ACCGACCAACTATGACAAGG+AGG | + | Chr3:77581442-77581461 | MsG0380015988.01.T01:CDS | 50.0% | |
| AGATGGAACAGGAATGCGTG+AGG | + | Chr3:77579250-77579269 | MsG0380015988.01.T01:CDS | 50.0% | |
| AGTGGAGCTGGCATTTCATG+TGG | - | Chr3:77579191-77579210 | None:intergenic | 50.0% | |
| ATCACAAGGCGAAGTCCATG+GGG | - | Chr3:77581120-77581139 | None:intergenic | 50.0% | |
| CACCCAGATGGCGAACAATA+TGG | + | Chr3:77580553-77580572 | MsG0380015988.01.T01:CDS | 50.0% | |
| CCAAATCCAGCTCCAAGTGA+AGG | - | Chr3:77578419-77578438 | None:intergenic | 50.0% | |
| CCAAGTTTCCCTATCCTCGT+AGG | + | Chr3:77579366-77579385 | MsG0380015988.01.T01:CDS | 50.0% | |
| CCTACGAGGATAGGGAAACT+TGG | - | Chr3:77579369-77579388 | None:intergenic | 50.0% | |
| CCTTCACTTGGAGCTGGATT+TGG | + | Chr3:77578416-77578435 | MsG0380015988.01.T01:CDS | 50.0% | |
| CGGAGTTCATTGATCAGTGG+AGG | + | Chr3:77580822-77580841 | MsG0380015988.01.T01:CDS | 50.0% | |
| CTAAGTTTGCCACACCCAGA+TGG | + | Chr3:77580541-77580560 | MsG0380015988.01.T01:CDS | 50.0% | |
| CTATCACAAGGCGAAGTCCA+TGG | - | Chr3:77581122-77581141 | None:intergenic | 50.0% | |
| CTGAAGTTAACCAGTGGAGC+TGG | - | Chr3:77579203-77579222 | None:intergenic | 50.0% | |
| GAACAGGAATGCGTGAGGAA+TGG | + | Chr3:77579255-77579274 | MsG0380015988.01.T01:CDS | 50.0% | |
| GAAGTACGTTGCCTCTTCGA+AGG | + | Chr3:77579711-77579730 | MsG0380015988.01.T01:CDS | 50.0% | |
| GAAGTCGTAGAGATCGGTCA+TGG | + | Chr3:77581276-77581295 | MsG0380015988.01.T01:CDS | 50.0% | |
| GAATTCATCTCAGGCCACCA+AGG | - | Chr3:77581318-77581337 | None:intergenic | 50.0% | |
| GACCTTGCTCGTCCAATTCT+CGG | + | Chr3:77579335-77579354 | MsG0380015988.01.T01:CDS | 50.0% | |
| GAGCTGGCATTTCATGTGGA+AGG | - | Chr3:77579187-77579206 | None:intergenic | 50.0% | |
| GCAAGGTCTCGACTCTTATC+TGG | - | Chr3:77579323-77579342 | None:intergenic | 50.0% | |
| GCTATCTTAGGCCGTAGTGT+TGG | + | Chr3:77578482-77578501 | MsG0380015988.01.T01:CDS | 50.0% | |
| GCTCCATATTGTTCGCCATC+TGG | - | Chr3:77580559-77580578 | None:intergenic | 50.0% | |
| GCTCGGAGTTCATTGATCAG+TGG | + | Chr3:77580819-77580838 | MsG0380015988.01.T01:CDS | 50.0% | |
| GCTTAACTCCTCCTTCGAAG+AGG | - | Chr3:77579725-77579744 | None:intergenic | 50.0% | |
| GTTCTTCCCCTACGAGGATA+GGG | - | Chr3:77579377-77579396 | None:intergenic | 50.0% | |
| TAAGATCGGCAGGTAGTGCT+TGG | - | Chr3:77580932-77580951 | None:intergenic | 50.0% | |
| TATCCTCGTAGGGGAAGAAC+CGG | + | Chr3:77579377-77579396 | MsG0380015988.01.T01:CDS | 50.0% | |
| TATTGTTCGCCATCTGGGTG+TGG | - | Chr3:77580553-77580572 | None:intergenic | 50.0% | |
| TCAACTGGAGGCCAACACTA+CGG | - | Chr3:77578496-77578515 | None:intergenic | 50.0% | |
| TCAATGAGGGCCTCAGTCTT+TGG | - | Chr3:77581546-77581565 | None:intergenic | 50.0% | |
| TGAACACCATGTCCTTCTGG+AGG | - | Chr3:77580601-77580620 | None:intergenic | 50.0% | |
| TGGAGGTGGCATTATAGAGC+AGG | + | Chr3:77580839-77580858 | MsG0380015988.01.T01:CDS | 50.0% | |
| TTACCAACCTTGGCAGCAAC+AGG | + | Chr3:77578808-77578827 | MsG0380015988.01.T01:CDS | 50.0% | |
| TTTGCTTAACCGAACTGGCC+CGG | + | Chr3:77581736-77581755 | MsG0380015988.01.T01:three_prime_UTR | 50.0% | |
| ! | GGATGGGCTCACAGTAGAAA+AGG | + | Chr3:77580223-77580242 | MsG0380015988.01.T01:CDS | 50.0% |
| !! | AAAGTGCTGTTGCCTCCAGA+AGG | + | Chr3:77580586-77580605 | MsG0380015988.01.T01:CDS | 50.0% |
| !! | GGCCTTGTTAGAGACGTTGT+TGG | + | Chr3:77578437-77578456 | MsG0380015988.01.T01:CDS | 50.0% |
| ATCGGCAGGTAGTGCTTGGT+CGG | - | Chr3:77580928-77580947 | None:intergenic | 55.0% | |
| ATCTCAACAGCGTACGGTCC+TGG | - | Chr3:77580873-77580892 | None:intergenic | 55.0% | |
| CATCCTGTTGCTGCCAAGGT+TGG | - | Chr3:77578814-77578833 | None:intergenic | 55.0% | |
| CATGGGGAGGTGGATACTTG+AGG | - | Chr3:77579824-77579843 | None:intergenic | 55.0% | |
| CCACCTCCCCATGTCATTCA+AGG | + | Chr3:77579831-77579850 | MsG0380015988.01.T01:CDS | 55.0% | |
| CCTTGAATGACATGGGGAGG+TGG | - | Chr3:77579834-77579853 | None:intergenic | 55.0% | |
| CTCCGAGAATTGGACGAGCA+AGG | - | Chr3:77579340-77579359 | None:intergenic | 55.0% | |
| CTGTTGCCTCCAGAAGGACA+TGG | + | Chr3:77580592-77580611 | MsG0380015988.01.T01:CDS | 55.0% | |
| CTTGCTCGTCCAATTCTCGG+AGG | + | Chr3:77579338-77579357 | MsG0380015988.01.T01:CDS | 55.0% | |
| GCAAGTCAAGCCTTCTCCAC+TGG | - | Chr3:77581792-77581811 | None:intergenic | 55.0% | |
| GCATCTTAACCGGGCCAGTT+CGG | - | Chr3:77581748-77581767 | None:intergenic | 55.0% | |
| GGTTCTTCCCCTACGAGGAT+AGG | - | Chr3:77579378-77579397 | None:intergenic | 55.0% | |
| GTACGTTGCCTCTTCGAAGG+AGG | + | Chr3:77579714-77579733 | MsG0380015988.01.T01:CDS | 55.0% | |
| GTCAAGCCTTCTCCACTGGA+AGG | - | Chr3:77581788-77581807 | None:intergenic | 55.0% | |
| GTCCGAAATTGACAGCTGCG+TGG | - | Chr3:77581395-77581414 | None:intergenic | 55.0% | |
| !! | GGAGAAGGCTTGACTTGCAG+AGG | + | Chr3:77581794-77581813 | MsG0380015988.01.T01:three_prime_UTR | 55.0% |
| !! | GGATCTAGCTTGCTTTGGGG+TGG | - | Chr3:77580146-77580165 | None:intergenic | 55.0% |
| !! | TGGTGGCACTGATCAACTGG+AGG | - | Chr3:77578508-77578527 | None:intergenic | 55.0% |
| TCGGCAGGTAGTGCTTGGTC+GGG | - | Chr3:77580927-77580946 | None:intergenic | 60.0% | |
| CCAGATGCCAGTGCACCCCA+TGG | + | Chr3:77581102-77581121 | MsG0380015988.01.T01:CDS | 65.0% | |
| CGGCAGGTAGTGCTTGGTCG+GGG | - | Chr3:77580926-77580945 | None:intergenic | 65.0% | |
| GCAGGCCCTTCACTTGGAGC+TGG | + | Chr3:77578410-77578429 | MsG0380015988.01.T01:CDS | 65.0% | |
| GCGAAGTCCATGGGGTGCAC+TGG | - | Chr3:77581112-77581131 | None:intergenic | 65.0% | |
| ! | CCATGGGGTGCACTGGCATC+TGG | - | Chr3:77581105-77581124 | None:intergenic | 65.0% |
| !! | CTGCCGGTTCTTCCCCTACG+AGG | - | Chr3:77579383-77579402 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 77578250 | 77582097 | 77578250 | ID=MsG0380015988.01;Name=MsG0380015988.01 |
| Chr3 | mRNA | 77578250 | 77582097 | 77578250 | ID=MsG0380015988.01.T01;Parent=MsG0380015988.01;Name=MsG0380015988.01.T01;_AED=0.13;_eAED=0.13;_QI=73|0.87|0.77|1|1|1|9|480|763 |
| Chr3 | exon | 77578250 | 77578536 | 77578250 | ID=MsG0380015988.01.T01:exon:1435;Parent=MsG0380015988.01.T01 |
| Chr3 | exon | 77578753 | 77579036 | 77578753 | ID=MsG0380015988.01.T01:exon:1436;Parent=MsG0380015988.01.T01 |
| Chr3 | exon | 77579179 | 77579419 | 77579179 | ID=MsG0380015988.01.T01:exon:1437;Parent=MsG0380015988.01.T01 |
| Chr3 | exon | 77579538 | 77579852 | 77579538 | ID=MsG0380015988.01.T01:exon:1438;Parent=MsG0380015988.01.T01 |
| Chr3 | exon | 77579951 | 77580036 | 77579951 | ID=MsG0380015988.01.T01:exon:1439;Parent=MsG0380015988.01.T01 |
| Chr3 | exon | 77580137 | 77580244 | 77580137 | ID=MsG0380015988.01.T01:exon:1440;Parent=MsG0380015988.01.T01 |
| Chr3 | exon | 77580388 | 77580695 | 77580388 | ID=MsG0380015988.01.T01:exon:1441;Parent=MsG0380015988.01.T01 |
| Chr3 | exon | 77580752 | 77580958 | 77580752 | ID=MsG0380015988.01.T01:exon:1442;Parent=MsG0380015988.01.T01 |
| Chr3 | exon | 77581089 | 77582097 | 77581089 | ID=MsG0380015988.01.T01:exon:1443;Parent=MsG0380015988.01.T01 |
| Chr3 | five_prime_UTR | 77578250 | 77578322 | 77578250 | ID=MsG0380015988.01.T01:five_prime_utr;Parent=MsG0380015988.01.T01 |
| Chr3 | CDS | 77578323 | 77578536 | 77578323 | ID=MsG0380015988.01.T01:cds;Parent=MsG0380015988.01.T01 |
| Chr3 | CDS | 77578753 | 77579036 | 77578753 | ID=MsG0380015988.01.T01:cds;Parent=MsG0380015988.01.T01 |
| Chr3 | CDS | 77579179 | 77579419 | 77579179 | ID=MsG0380015988.01.T01:cds;Parent=MsG0380015988.01.T01 |
| Chr3 | CDS | 77579538 | 77579852 | 77579538 | ID=MsG0380015988.01.T01:cds;Parent=MsG0380015988.01.T01 |
| Chr3 | CDS | 77579951 | 77580036 | 77579951 | ID=MsG0380015988.01.T01:cds;Parent=MsG0380015988.01.T01 |
| Chr3 | CDS | 77580137 | 77580244 | 77580137 | ID=MsG0380015988.01.T01:cds;Parent=MsG0380015988.01.T01 |
| Chr3 | CDS | 77580388 | 77580695 | 77580388 | ID=MsG0380015988.01.T01:cds;Parent=MsG0380015988.01.T01 |
| Chr3 | CDS | 77580752 | 77580958 | 77580752 | ID=MsG0380015988.01.T01:cds;Parent=MsG0380015988.01.T01 |
| Chr3 | CDS | 77581089 | 77581617 | 77581089 | ID=MsG0380015988.01.T01:cds;Parent=MsG0380015988.01.T01 |
| Chr3 | three_prime_UTR | 77581618 | 77582097 | 77581618 | ID=MsG0380015988.01.T01:three_prime_utr;Parent=MsG0380015988.01.T01 |
| Gene Sequence |
| Protein sequence |
