AlfalfaGEDB | MsG0380016193.01

M. sativa cultivar ZhongmuNo.1 / MsG0380016193.01

KEGG: -
GO: -
PFAM: PF04669

Nr:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016193.01.T03	AFK42978.1	100	87	0	92	178	88	174	4.82E-57	187
MsG0380016193.01.T04	AFK42978.1	100	87	0	62	148	88	174	2.18E-57	186
MsG0380016193.01.T01	XP_003601776.1	97.093	172	5	43	214	27	198	6.73E-119	351
MsG0380016193.01.T05	AFK42978.1	100	84	0	1	84	91	174	3.84E-55	178
MsG0380016193.01.T02	XP_003601776.1	97.661	171	4	1	171	28	198	2.21E-119	350

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016193.01.T01	Q9C7F9	65.957	141	47	1	74	214	57	196	2.04E-61	197
MsG0380016193.01.T02	Q9C7F9	65.957	141	47	1	31	171	57	196	3.79E-62	197
MsG0380016193.01.T03	Q9C7F9	68.687	99	26	3	85	178	191	289	9.28E-38	134
MsG0380016193.01.T04	Q9C7F9	72.826	92	20	3	62	148	198	289	8.13E-38	133
MsG0380016193.01.T05	Q9C7F9	78.378	74	16	0	1	74	201	274	1.66E-36	127

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016193.01.T02	G7JBY4	97.661	171	4	1	171	28	198	1.06e-119	350
MsG0380016193.01.T03	G7JBY4	100.000	87	0	92	178	200	286	1.41e-56	189
MsG0380016193.01.T04	G7JBY4	100.000	87	0	62	148	200	286	8.15e-57	188
MsG0380016193.01.T04	I3SRT6	100.000	87	0	62	148	88	174	1.04e-57	186
MsG0380016193.01.T05	G7JBY4	100.000	84	0	1	84	203	286	1.11e-54	180
MsG0380016193.01.T05	I3SRT6	100.000	84	0	1	84	91	174	1.83e-55	178

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000260.01	MsG0380016193.01	0.818586	1.814130e-52	1.363473e-49
MsG0180004728.01	MsG0380016193.01	0.806987	6.298099e-50	3.467049e-47
MsG0180005656.01	MsG0380016193.01	0.804446	2.151830e-49	1.109702e-46
MsG0380016193.01	MsG0780040906.01	0.803819	2.905419e-49	1.474433e-46
MsG0380016193.01	MsG0780040921.01	0.808589	2.875705e-50	1.650685e-47
MsG0380016193.01	MsG0880047577.01	0.849558	2.993463e-60	5.696479e-57

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016193.01.T03	MTR_3g085270	100.000	87	0	0	92	178	200	286	3.58e-60	189
MsG0380016193.01.T03	MTR_8g080660	73.404	94	18	1	92	178	204	297	8.00e-45	150
MsG0380016193.01.T03	MTR_7g029100	68.966	87	26	1	89	174	188	274	2.58e-35	125
MsG0380016193.01.T03	MTR_4g485570	50.000	90	43	2	90	178	205	293	2.13e-25	99.8
MsG0380016193.01.T03	MTR_4g485560	52.222	90	41	2	90	178	155	243	4.09e-25	97.8
MsG0380016193.01.T03	MTR_3g005710	53.333	75	34	1	92	166	212	285	4.44e-22	90.5
MsG0380016193.01.T03	MTR_4g102900	47.436	78	38	1	89	166	212	286	9.74e-22	89.7
MsG0380016193.01.T03	MTR_4g094895	44.318	88	47	2	92	178	210	296	6.54e-21	87.8
MsG0380016193.01.T04	MTR_3g085270	100.000	87	0	0	62	148	200	286	2.07e-60	188
MsG0380016193.01.T04	MTR_8g080660	74.468	94	17	1	62	148	204	297	3.08e-45	149
MsG0380016193.01.T04	MTR_7g029100	68.966	87	26	1	59	144	188	274	1.42e-35	124
MsG0380016193.01.T04	MTR_4g485570	50.000	90	43	2	60	148	205	293	9.34e-26	99.8
MsG0380016193.01.T04	MTR_4g485560	52.222	90	41	2	60	148	155	243	1.92e-25	97.4
MsG0380016193.01.T04	MTR_3g005710	53.333	75	34	1	62	136	212	285	3.59e-22	89.7
MsG0380016193.01.T04	MTR_4g102900	47.436	78	38	1	59	136	212	286	5.91e-22	89.4
MsG0380016193.01.T04	MTR_4g094895	44.318	88	47	2	62	148	210	296	3.02e-21	87.4
MsG0380016193.01.T01	MTR_3g085270	97.093	172	5	0	43	214	27	198	8.15e-123	351
MsG0380016193.01.T01	MTR_8g080660	63.743	171	60	1	44	214	34	202	6.96e-76	232
MsG0380016193.01.T01	MTR_7g029100	48.905	137	51	2	78	214	72	189	4.15e-35	127
MsG0380016193.01.T01	MTR_3g005710	39.873	158	91	3	75	232	75	228	1.50e-32	120
MsG0380016193.01.T01	MTR_4g094895	30.636	173	114	4	45	214	39	208	2.86e-19	85.1
MsG0380016193.01.T01	MTR_4g485570	33.094	139	86	4	79	213	69	204	3.07e-17	79.7
MsG0380016193.01.T01	MTR_4g485560	31.111	135	86	4	83	213	23	154	5.03e-16	75.5
MsG0380016193.01.T01	MTR_4g102900	37.000	100	60	2	115	212	113	211	4.31e-13	67.8
MsG0380016193.01.T05	MTR_3g085270	100.000	84	0	0	1	84	203	286	2.81e-58	180
MsG0380016193.01.T05	MTR_8g080660	73.626	91	17	1	1	84	207	297	1.78e-45	147
MsG0380016193.01.T05	MTR_7g029100	70.370	81	23	1	1	80	194	274	5.61e-34	117
MsG0380016193.01.T05	MTR_4g485570	49.412	85	41	2	1	84	210	293	4.07e-25	95.1
MsG0380016193.01.T05	MTR_4g485560	51.765	85	39	2	1	84	160	243	4.66e-24	91.3
MsG0380016193.01.T05	MTR_3g005710	52.778	72	33	1	1	72	215	285	2.38e-21	85.1
MsG0380016193.01.T05	MTR_4g102900	45.238	84	41	2	1	84	218	296	1.97e-20	82.4
MsG0380016193.01.T05	MTR_4g094895	43.529	85	46	2	1	84	213	296	4.97e-20	81.6
MsG0380016193.01.T02	MTR_3g085270	97.661	171	4	0	1	171	28	198	2.68e-123	350
MsG0380016193.01.T02	MTR_8g080660	63.743	171	60	1	1	171	34	202	7.46e-77	233
MsG0380016193.01.T02	MTR_7g029100	48.905	137	51	2	35	171	72	189	1.75e-35	126
MsG0380016193.01.T02	MTR_3g005710	42.857	140	76	3	32	171	75	210	4.60e-33	120
MsG0380016193.01.T02	MTR_4g094895	30.636	173	114	4	2	171	39	208	8.39e-20	85.5
MsG0380016193.01.T02	MTR_4g485570	33.094	139	86	4	36	170	69	204	5.11e-18	80.5
MsG0380016193.01.T02	MTR_4g485560	31.111	135	86	4	40	170	23	154	9.81e-17	76.3
MsG0380016193.01.T02	MTR_4g102900	37.000	100	60	2	72	169	113	211	1.16e-13	68.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016193.01.T03	AT1G67330	65.979	97	30	2	85	178	195	291	2.03e-39	135
MsG0380016193.01.T03	AT1G27930	68.687	99	26	3	85	178	191	289	9.46e-39	134
MsG0380016193.01.T03	AT1G09610	52.381	84	39	1	92	174	191	274	5.93e-25	98.2
MsG0380016193.01.T03	AT1G71690	47.778	90	44	2	92	178	205	294	5.48e-22	90.5
MsG0380016193.01.T03	AT1G33800	44.660	103	56	1	76	178	188	289	7.85e-22	90.1
MsG0380016193.01.T03	AT5G67210	36.567	134	76	4	48	178	176	303	3.56e-21	88.6
MsG0380016193.01.T03	AT4G09990	45.977	87	47	0	92	178	196	282	3.57e-21	88.2
MsG0380016193.01.T03	AT3G50220	36.232	138	79	4	44	178	179	310	5.04e-21	88.2
MsG0380016193.01.T03	AT4G24910	43.678	87	47	1	92	178	223	307	2.00e-20	86.7
MsG0380016193.01.T03	AT2G15440	44.304	79	41	2	92	167	212	290	2.74e-19	83.6
MsG0380016193.01.T04	AT1G67330	70.000	90	24	2	62	148	202	291	1.68e-39	135
MsG0380016193.01.T04	AT1G27930	72.826	92	20	3	62	148	198	289	8.29e-39	133
MsG0380016193.01.T04	AT1G09610	52.381	84	39	1	62	144	191	274	3.80e-25	97.4
MsG0380016193.01.T04	AT1G71690	39.167	120	61	3	41	148	175	294	2.16e-22	90.5
MsG0380016193.01.T04	AT1G33800	44.660	103	56	1	46	148	188	289	6.04e-22	89.4
MsG0380016193.01.T04	AT5G67210	36.567	134	76	4	18	148	176	303	1.34e-21	88.6
MsG0380016193.01.T04	AT4G09990	45.977	87	47	0	62	148	196	282	2.30e-21	87.8
MsG0380016193.01.T04	AT3G50220	36.232	138	79	4	14	148	179	310	3.39e-21	87.8
MsG0380016193.01.T04	AT4G24910	43.678	87	47	1	62	148	223	307	1.07e-20	86.3
MsG0380016193.01.T04	AT2G15440	43.038	79	42	1	62	137	212	290	1.20e-19	83.6
MsG0380016193.01.T01	AT1G67330	59.064	171	66	3	47	214	31	200	8.05e-63	198
MsG0380016193.01.T01	AT1G27930	65.957	141	47	1	74	214	57	196	2.08e-62	197
MsG0380016193.01.T01	AT1G71690	40.805	174	91	3	51	214	32	203	1.74e-38	136
MsG0380016193.01.T01	AT4G09990	48.855	131	63	3	84	214	68	194	1.27e-34	125
MsG0380016193.01.T01	AT1G33800	47.328	131	65	2	84	214	76	202	4.67e-33	122
MsG0380016193.01.T01	AT1G09610	44.444	135	63	4	83	213	62	188	3.33e-31	116
MsG0380016193.01.T01	AT2G15440	37.037	135	80	3	82	214	79	210	6.87e-23	95.5
MsG0380016193.01.T01	AT5G67210	37.500	136	80	3	82	214	82	215	2.27e-21	91.3
MsG0380016193.01.T01	AT3G50220	34.337	166	95	5	52	214	68	222	9.21e-20	87.0
MsG0380016193.01.T05	AT1G67330	68.966	87	24	2	1	84	205	291	2.20e-39	132
MsG0380016193.01.T05	AT1G27930	78.378	74	16	0	1	74	201	274	1.69e-37	127
MsG0380016193.01.T05	AT1G09610	50.617	81	39	1	1	80	194	274	3.91e-24	92.0
MsG0380016193.01.T05	AT1G71690	45.977	87	44	2	1	84	208	294	1.77e-21	85.5
MsG0380016193.01.T05	AT4G09990	45.238	84	46	0	1	84	199	282	6.00e-21	84.0
MsG0380016193.01.T05	AT1G33800	47.619	84	43	1	1	84	207	289	1.02e-20	83.6
MsG0380016193.01.T05	AT3G50220	46.429	84	43	2	2	84	228	310	2.56e-20	82.8
MsG0380016193.01.T05	AT5G67210	44.706	85	45	2	1	84	220	303	3.57e-20	82.0
MsG0380016193.01.T05	AT4G24910	42.857	84	46	1	1	84	226	307	1.13e-19	80.9
MsG0380016193.01.T05	AT2G15440	42.105	76	41	1	1	73	215	290	4.10e-19	79.3
MsG0380016193.01.T02	AT1G67330	59.064	171	66	3	4	171	31	200	1.51e-63	199
MsG0380016193.01.T02	AT1G27930	65.957	141	47	1	31	171	57	196	3.86e-63	197
MsG0380016193.01.T02	AT1G71690	40.805	174	91	3	8	171	32	203	2.07e-39	137
MsG0380016193.01.T02	AT4G09990	48.855	131	63	3	41	171	68	194	3.30e-35	125
MsG0380016193.01.T02	AT1G33800	47.328	131	65	2	41	171	76	202	1.76e-33	121
MsG0380016193.01.T02	AT1G09610	44.444	135	63	4	40	170	62	188	1.44e-31	116
MsG0380016193.01.T02	AT2G15440	37.037	135	80	3	39	171	79	210	2.00e-23	95.5
MsG0380016193.01.T02	AT5G67210	37.500	136	80	3	39	171	82	215	7.61e-22	91.3
MsG0380016193.01.T02	AT3G50220	34.337	166	95	5	9	171	68	222	3.15e-20	87.0

Find 82 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAACGGTTTGAACCCATTT+AGG	0.226115	3:-80217930	None:intergenic
TGCAAGAAGAATTTGGTTAA+AGG	0.262142	3:+80218315	MsG0380016193.01.T03:CDS
TCCTTGAAGAAGATCCTAAA+TGG	0.262294	3:+80217916	MsG0380016193.01.T01:CDS
TTTCAGATAGCACCGTTTAA+TGG	0.271225	3:+80218357	MsG0380016193.01.T03:CDS
GTTTCTTTGCAAGAAGAATT+TGG	0.279499	3:+80218308	MsG0380016193.01.T03:CDS
TTCATAGGATTAACAACAAT+TGG	0.323694	3:+80217586	MsG0380016193.01.T01:CDS
AACTTTCTTGTCTTCGGACT+TGG	0.333037	3:+80217843	MsG0380016193.01.T01:CDS
CCATGCAACTTTCTTGTCTT+CGG	0.337891	3:+80217837	MsG0380016193.01.T01:CDS
CTATGAATAGCTTTCTTTGT+TGG	0.342361	3:-80217570	None:intergenic
GATTGTTGTCGTCGTTTGAT+CGG	0.356331	3:-80217701	None:intergenic
GGGTATTTCGCGGAGGCGCC+GGG	0.376413	3:+80218168	MsG0380016193.01.T01:CDS
GTTTGATCGGGCTCGGATCC+CGG	0.384818	3:-80217688	None:intergenic
AGGGTATTTCGCGGAGGCGC+CGG	0.386115	3:+80218167	MsG0380016193.01.T01:CDS
AAGAATTTGGTTAAAGGTGT+TGG	0.392806	3:+80218321	MsG0380016193.01.T03:CDS
AGTGAAGAATTGCTCTTAGT+TGG	0.396131	3:-80217734	None:intergenic
CGCGGAGGCGCCGGGGAGAA+TGG	0.402359	3:+80218176	MsG0380016193.01.T01:CDS
CCCATTTAGGATCTTCTTCA+AGG	0.404742	3:-80217917	None:intergenic
CTGCTGTTATGGCGAGGAAT+AGG	0.404951	3:+80218214	MsG0380016193.01.T01:CDS
TTAAAGGTGTTGGAAGGCTT+TGG	0.416618	3:+80218331	MsG0380016193.01.T03:CDS
CCACGTAGAAAAGCTTTAGA+AGG	0.421281	3:-80218056	None:intergenic
ATTGTTGTCGTCGTTTGATC+GGG	0.421366	3:-80217700	None:intergenic
CAACAAAGAAAGCTATTCAT+AGG	0.424712	3:+80217571	MsG0380016193.01.T01:CDS
GCTCGGATCCCGGATGAGAT+TGG	0.441437	3:-80217678	None:intergenic
CTACATTGTCCAATCTCATC+CGG	0.443494	3:+80217669	MsG0380016193.01.T01:CDS
TCCGTATCGTAAACTTCATC+AGG	0.474436	3:-80218113	None:intergenic
TGTCGTCGTTTGATCGGGCT+CGG	0.479630	3:-80217695	None:intergenic
GTTGGAGAGGATAATAATAA+CGG	0.482855	3:-80217552	None:intergenic
ACGGTATGGGCTCGAAGGCC+CGG	0.484670	3:-80217963	None:intergenic
GCCTCCGCGAAATACCCTTT+CGG	0.484707	3:-80218162	None:intergenic
AACCGTTCTTAAAGATGCAC+CGG	0.491873	3:+80217944	MsG0380016193.01.T01:CDS
GTGTTCGATAACGAACGGTA+TGG	0.493080	3:-80217977	None:intergenic
GGAGAATCAGTGCCATTAAA+CGG	0.493722	3:-80218369	None:intergenic
CCTTGAAGAAGATCCTAAAT+GGG	0.498579	3:+80217917	MsG0380016193.01.T01:CDS
GCTCTTAGTTGGATCGGTGA+TGG	0.508293	3:-80217723	None:intergenic
ACCTGATGAAGTTTACGATA+CGG	0.512674	3:+80218112	MsG0380016193.01.T01:CDS
AGATGAGTTTGTTAGCTTCA+CGG	0.513693	3:-80218004	None:intergenic
GGAGGCGCCGGGGAGAATGG+CGG	0.514828	3:+80218179	MsG0380016193.01.T01:CDS
ACGTGTTGTTCCTCAACAAT+CGG	0.515353	3:+80217767	MsG0380016193.01.T01:CDS
TGTTCGATAACGAACGGTAT+GGG	0.516854	3:-80217976	None:intergenic
GCGAGGAATAGGAAGGGATC+TGG	0.518470	3:+80218225	MsG0380016193.01.T03:CDS
TTGGCCATGATTCTCTCATG+TGG	0.520423	3:+80217862	MsG0380016193.01.T01:CDS
TGGCCATGATTCTCTCATGT+GGG	0.532593	3:+80217863	MsG0380016193.01.T01:CDS
ATTTGGTTAAAGGTGTTGGA+AGG	0.535401	3:+80218325	MsG0380016193.01.T03:CDS
ATCTCTGAGACCGATTGTTG+AGG	0.537003	3:-80217777	None:intergenic
AGGAACAATGTGTTACCACC+TGG	0.539699	3:-80217897	None:intergenic
AATAGCTTTCTTTGTTGGAG+AGG	0.540307	3:-80217565	None:intergenic
GGCGCCGGGGAGAATGGCGG+CGG	0.542516	3:+80218182	MsG0380016193.01.T01:CDS
GCCACAGCGATCACAACCTT+CGG	0.546985	3:+80217633	MsG0380016193.01.T01:CDS
AACACCGCCGCCATTCTCCC+CGG	0.550622	3:-80218186	None:intergenic
CATAGGTTCCTTGCGGTAGG+AGG	0.561581	3:-80218027	None:intergenic
GCTTTAGAAGGTGAACACAT+AGG	0.564753	3:-80218044	None:intergenic
GCCCGGTGCATCTTTAAGAA+CGG	0.565697	3:-80217946	None:intergenic
TACATTGTCCAATCTCATCC+GGG	0.571559	3:+80217670	MsG0380016193.01.T01:CDS
TTTGCATGATGTGGATCGTA+GGG	0.573129	3:+80218263	MsG0380016193.01.T03:CDS
AACGAACGGTATGGGCTCGA+AGG	0.577262	3:-80217968	None:intergenic
TAATGATCGATGCACCGAAA+GGG	0.577528	3:+80218148	MsG0380016193.01.T01:CDS
TGTTATGGCGAGGAATAGGA+AGG	0.578541	3:+80218218	MsG0380016193.01.T03:CDS
AGAATTGCTCTTAGTTGGAT+CGG	0.578604	3:-80217729	None:intergenic
AAGCCCACATGAGAGAATCA+TGG	0.587500	3:-80217866	None:intergenic
AAAGTTGCATGGTCGATCGT+AGG	0.593110	3:-80217826	None:intergenic
ATAATGATCGATGCACCGAA+AGG	0.606232	3:+80218147	MsG0380016193.01.T01:CDS
GAAGTTTACGATACGGAGTG+TGG	0.607296	3:+80218119	MsG0380016193.01.T01:CDS
TGCACCGAAAGGGTATTTCG+CGG	0.610339	3:+80218158	MsG0380016193.01.T01:CDS
ATGTGGGCTTCGTTTAACCC+AGG	0.611048	3:+80217879	MsG0380016193.01.T01:CDS
GGTATTTCGCGGAGGCGCCG+GGG	0.612870	3:+80218169	MsG0380016193.01.T01:CDS
GGAACAATGTGTTACCACCT+GGG	0.635643	3:-80217896	None:intergenic
ACCGTTCTTAAAGATGCACC+GGG	0.648910	3:+80217945	MsG0380016193.01.T01:CDS
TGGGCTTCGTTTAACCCAGG+TGG	0.655905	3:+80217882	MsG0380016193.01.T01:CDS
TAGTGACGAGGATGTACCGA+AGG	0.657514	3:-80217649	None:intergenic
TTGAGGAACAACACGTGATG+TGG	0.657522	3:-80217760	None:intergenic
CCGAAGACAAGAAAGTTGCA+TGG	0.658301	3:-80217837	None:intergenic
ACTCATCTCCTCCTACCGCA+AGG	0.662626	3:+80218019	MsG0380016193.01.T01:CDS
GAGCTGTGTTCGATAACGAA+CGG	0.677853	3:-80217982	None:intergenic
GCATGATGTGGATCGTAGGG+TGG	0.679625	3:+80218266	MsG0380016193.01.T03:CDS
ACACATAGGTTCCTTGCGGT+AGG	0.681932	3:-80218030	None:intergenic
CAACGAGTTTAACAGAAACG+AGG	0.688362	3:-80218390	None:intergenic
GTTATGGCGAGGAATAGGAA+GGG	0.693114	3:+80218219	MsG0380016193.01.T03:CDS
TTTCTGCTGCTGTTATGGCG+AGG	0.694646	3:+80218208	MsG0380016193.01.T01:CDS
ACCGAAAGGGTATTTCGCGG+AGG	0.696174	3:+80218161	MsG0380016193.01.T01:CDS
GTGAACACATAGGTTCCTTG+CGG	0.708324	3:-80218034	None:intergenic
GATTGGACAATGTAGTGACG+AGG	0.771230	3:-80217661	None:intergenic
ACCGAAGGTTGTGATCGCTG+TGG	0.773282	3:-80217634	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTGTTGTTAATGTAATG+TGG	-	Chr3:80217524-80217543	None:intergenic	20.0%
!	TTCATAGGATTAACAACAAT+TGG	+	Chr3:80217586-80217605	MsG0380016193.01.T01:CDS	25.0%
	CAACAAAGAAAGCTATTCAT+AGG	+	Chr3:80217571-80217590	MsG0380016193.01.T01:CDS	30.0%
	CTATGAATAGCTTTCTTTGT+TGG	-	Chr3:80217573-80217592	None:intergenic	30.0%
	GTTGGAGAGGATAATAATAA+CGG	-	Chr3:80217555-80217574	None:intergenic	30.0%
	GTTTCTTTGCAAGAAGAATT+TGG	+	Chr3:80218308-80218327	MsG0380016193.01.T03:CDS	30.0%
	TGCAAGAAGAATTTGGTTAA+AGG	+	Chr3:80218315-80218334	MsG0380016193.01.T03:CDS	30.0%
!	AAGAATTTGGTTAAAGGTGT+TGG	+	Chr3:80218321-80218340	MsG0380016193.01.T03:CDS	30.0%
	AATAGCTTTCTTTGTTGGAG+AGG	-	Chr3:80217568-80217587	None:intergenic	35.0%
	ACCTGATGAAGTTTACGATA+CGG	+	Chr3:80218112-80218131	MsG0380016193.01.T01:CDS	35.0%
	AGAATTGCTCTTAGTTGGAT+CGG	-	Chr3:80217732-80217751	None:intergenic	35.0%
	AGTGAAGAATTGCTCTTAGT+TGG	-	Chr3:80217737-80217756	None:intergenic	35.0%
	CCTTGAAGAAGATCCTAAAT+GGG	+	Chr3:80217917-80217936	MsG0380016193.01.T01:CDS	35.0%
	TCCTTGAAGAAGATCCTAAA+TGG	+	Chr3:80217916-80217935	MsG0380016193.01.T01:CDS	35.0%
	TTTCAGATAGCACCGTTTAA+TGG	+	Chr3:80218357-80218376	MsG0380016193.01.T03:CDS	35.0%
!!	AGATGAGTTTGTTAGCTTCA+CGG	-	Chr3:80218007-80218026	None:intergenic	35.0%
!!	ATTTGGTTAAAGGTGTTGGA+AGG	+	Chr3:80218325-80218344	MsG0380016193.01.T03:CDS	35.0%
!!	GTTGTTTTGTTGTGTTTGTG+TGG	-	Chr3:80217502-80217521	None:intergenic	35.0%
	AACCGTTCTTAAAGATGCAC+CGG	+	Chr3:80217944-80217963	MsG0380016193.01.T01:CDS	40.0%
	AACTTTCTTGTCTTCGGACT+TGG	+	Chr3:80217843-80217862	MsG0380016193.01.T01:CDS	40.0%
	AGAACGGTTTGAACCCATTT+AGG	-	Chr3:80217933-80217952	None:intergenic	40.0%
	ATAATGATCGATGCACCGAA+AGG	+	Chr3:80218147-80218166	MsG0380016193.01.T01:CDS	40.0%
	ATTGTTGTCGTCGTTTGATC+GGG	-	Chr3:80217703-80217722	None:intergenic	40.0%
	CCATGCAACTTTCTTGTCTT+CGG	+	Chr3:80217837-80217856	MsG0380016193.01.T01:CDS	40.0%
	CTACATTGTCCAATCTCATC+CGG	+	Chr3:80217669-80217688	MsG0380016193.01.T01:CDS	40.0%
	GATTGTTGTCGTCGTTTGAT+CGG	-	Chr3:80217704-80217723	None:intergenic	40.0%
	TAATGATCGATGCACCGAAA+GGG	+	Chr3:80218148-80218167	MsG0380016193.01.T01:CDS	40.0%
	TACATTGTCCAATCTCATCC+GGG	+	Chr3:80217670-80217689	MsG0380016193.01.T01:CDS	40.0%
	TCCGTATCGTAAACTTCATC+AGG	-	Chr3:80218116-80218135	None:intergenic	40.0%
	TGTTCGATAACGAACGGTAT+GGG	-	Chr3:80217979-80217998	None:intergenic	40.0%
	TTTGCATGATGTGGATCGTA+GGG	+	Chr3:80218263-80218282	MsG0380016193.01.T03:CDS	40.0%
!	ACGTGTTGTTCCTCAACAAT+CGG	+	Chr3:80217767-80217786	MsG0380016193.01.T01:CDS	40.0%
!	CCCATTTAGGATCTTCTTCA+AGG	-	Chr3:80217920-80217939	None:intergenic	40.0%
!	GGAGAATCAGTGCCATTAAA+CGG	-	Chr3:80218372-80218391	None:intergenic	40.0%
!	TTTTGCATGATGTGGATCGT+AGG	+	Chr3:80218262-80218281	MsG0380016193.01.T03:CDS	40.0%
!!	CCACGTAGAAAAGCTTTAGA+AGG	-	Chr3:80218059-80218078	None:intergenic	40.0%
!!	GCATGTGTTTTTGCATGATG+TGG	+	Chr3:80218254-80218273	MsG0380016193.01.T03:CDS	40.0%
!!	GCTTTAGAAGGTGAACACAT+AGG	-	Chr3:80218047-80218066	None:intergenic	40.0%
!!	TTAAAGGTGTTGGAAGGCTT+TGG	+	Chr3:80218331-80218350	MsG0380016193.01.T03:CDS	40.0%
!!!	CCTTCTAAAGCTTTTCTACG+TGG	+	Chr3:80218056-80218075	MsG0380016193.01.T01:CDS	40.0%
	AAAGTTGCATGGTCGATCGT+AGG	-	Chr3:80217829-80217848	None:intergenic	45.0%
	AAGCCCACATGAGAGAATCA+TGG	-	Chr3:80217869-80217888	None:intergenic	45.0%
	ACCGTTCTTAAAGATGCACC+GGG	+	Chr3:80217945-80217964	MsG0380016193.01.T01:CDS	45.0%
	AGGAACAATGTGTTACCACC+TGG	-	Chr3:80217900-80217919	None:intergenic	45.0%
	CCGAAGACAAGAAAGTTGCA+TGG	-	Chr3:80217840-80217859	None:intergenic	45.0%
	GAAGTTTACGATACGGAGTG+TGG	+	Chr3:80218119-80218138	MsG0380016193.01.T01:CDS	45.0%
	GAGCTGTGTTCGATAACGAA+CGG	-	Chr3:80217985-80218004	None:intergenic	45.0%
	GATTGGACAATGTAGTGACG+AGG	-	Chr3:80217664-80217683	None:intergenic	45.0%
	GGAACAATGTGTTACCACCT+GGG	-	Chr3:80217899-80217918	None:intergenic	45.0%
	GTGAACACATAGGTTCCTTG+CGG	-	Chr3:80218037-80218056	None:intergenic	45.0%
	GTGTTCGATAACGAACGGTA+TGG	-	Chr3:80217980-80217999	None:intergenic	45.0%
	GTTATGGCGAGGAATAGGAA+GGG	+	Chr3:80218219-80218238	MsG0380016193.01.T03:CDS	45.0%
	TGGCCATGATTCTCTCATGT+GGG	+	Chr3:80217863-80217882	MsG0380016193.01.T01:CDS	45.0%
	TGTTATGGCGAGGAATAGGA+AGG	+	Chr3:80218218-80218237	MsG0380016193.01.T03:CDS	45.0%
	TTGAGGAACAACACGTGATG+TGG	-	Chr3:80217763-80217782	None:intergenic	45.0%
	TTGGCCATGATTCTCTCATG+TGG	+	Chr3:80217862-80217881	MsG0380016193.01.T01:CDS	45.0%
!	GGTGTTTTCTGCTGCTGTTA+TGG	+	Chr3:80218203-80218222	MsG0380016193.01.T01:CDS	45.0%
!!	ATCTCTGAGACCGATTGTTG+AGG	-	Chr3:80217780-80217799	None:intergenic	45.0%
	ACACATAGGTTCCTTGCGGT+AGG	-	Chr3:80218033-80218052	None:intergenic	50.0%
	ATGTGGGCTTCGTTTAACCC+AGG	+	Chr3:80217879-80217898	MsG0380016193.01.T01:CDS	50.0%
	CTGCTGTTATGGCGAGGAAT+AGG	+	Chr3:80218214-80218233	MsG0380016193.01.T01:CDS	50.0%
	GCTCTTAGTTGGATCGGTGA+TGG	-	Chr3:80217726-80217745	None:intergenic	50.0%
	TAGTGACGAGGATGTACCGA+AGG	-	Chr3:80217652-80217671	None:intergenic	50.0%
	TTTCTGCTGCTGTTATGGCG+AGG	+	Chr3:80218208-80218227	MsG0380016193.01.T01:CDS	50.0%
!	GCCCGGTGCATCTTTAAGAA+CGG	-	Chr3:80217949-80217968	None:intergenic	50.0%
!!	TGCACCGAAAGGGTATTTCG+CGG	+	Chr3:80218158-80218177	MsG0380016193.01.T01:CDS	50.0%
	AACGAACGGTATGGGCTCGA+AGG	-	Chr3:80217971-80217990	None:intergenic	55.0%
	ACCGAAGGTTGTGATCGCTG+TGG	-	Chr3:80217637-80217656	None:intergenic	55.0%
	ACTCATCTCCTCCTACCGCA+AGG	+	Chr3:80218019-80218038	MsG0380016193.01.T01:CDS	55.0%
	CATAGGTTCCTTGCGGTAGG+AGG	-	Chr3:80218030-80218049	None:intergenic	55.0%
	GCATGATGTGGATCGTAGGG+TGG	+	Chr3:80218266-80218285	MsG0380016193.01.T03:CDS	55.0%
	GCCACAGCGATCACAACCTT+CGG	+	Chr3:80217633-80217652	MsG0380016193.01.T01:CDS	55.0%
	GCCTCCGCGAAATACCCTTT+CGG	-	Chr3:80218165-80218184	None:intergenic	55.0%
	GCGAGGAATAGGAAGGGATC+TGG	+	Chr3:80218225-80218244	MsG0380016193.01.T03:CDS	55.0%
	TGGGCTTCGTTTAACCCAGG+TGG	+	Chr3:80217882-80217901	MsG0380016193.01.T01:CDS	55.0%
	TGTCGTCGTTTGATCGGGCT+CGG	-	Chr3:80217698-80217717	None:intergenic	55.0%
!!	ACCGAAAGGGTATTTCGCGG+AGG	+	Chr3:80218161-80218180	MsG0380016193.01.T01:CDS	55.0%
	GCTCGGATCCCGGATGAGAT+TGG	-	Chr3:80217681-80217700	None:intergenic	60.0%
	GTTTGATCGGGCTCGGATCC+CGG	-	Chr3:80217691-80217710	None:intergenic	60.0%
	AACACCGCCGCCATTCTCCC+CGG	-	Chr3:80218189-80218208	None:intergenic	65.0%
	ACGGTATGGGCTCGAAGGCC+CGG	-	Chr3:80217966-80217985	None:intergenic	65.0%
!	AGGGTATTTCGCGGAGGCGC+CGG	+	Chr3:80218167-80218186	MsG0380016193.01.T01:CDS	65.0%
!!	GGGTATTTCGCGGAGGCGCC+GGG	+	Chr3:80218168-80218187	MsG0380016193.01.T01:CDS	70.0%
!!	GGTATTTCGCGGAGGCGCCG+GGG	+	Chr3:80218169-80218188	MsG0380016193.01.T01:CDS	70.0%
!!	GGAGGCGCCGGGGAGAATGG+CGG	+	Chr3:80218179-80218198	MsG0380016193.01.T01:CDS	75.0%
!!	GGCGCCGGGGAGAATGGCGG+CGG	+	Chr3:80218182-80218201	MsG0380016193.01.T01:CDS	80.0%
!!!	CGCGGAGGCGCCGGGGAGAA+TGG	+	Chr3:80218176-80218195	MsG0380016193.01.T01:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	80217495	80218404	80217495	ID=MsG0380016193.01;Name=MsG0380016193.01
Chr3	mRNA	80217495	80218235	80217495	ID=MsG0380016193.01.T01;Parent=MsG0380016193.01;Name=MsG0380016193.01.T01;_AED=0.32;_eAED=0.32;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|246
Chr3	exon	80217495	80218235	80217495	ID=MsG0380016193.01.T01:exon:32768;Parent=MsG0380016193.01.T01
Chr3	CDS	80217495	80218235	80217495	ID=MsG0380016193.01.T01:cds;Parent=MsG0380016193.01.T01
Chr3	mRNA	80217624	80218235	80217624	ID=MsG0380016193.01.T02;Parent=MsG0380016193.01;Name=MsG0380016193.01.T02;_AED=0.35;_eAED=0.35;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|203
Chr3	exon	80217624	80218235	80217624	ID=MsG0380016193.01.T02:exon:32769;Parent=MsG0380016193.01.T02
Chr3	CDS	80217624	80218235	80217624	ID=MsG0380016193.01.T02:cds;Parent=MsG0380016193.01.T02
Chr3	mRNA	80217868	80218404	80217868	ID=MsG0380016193.01.T03;Parent=MsG0380016193.01;Name=MsG0380016193.01.T03;_AED=0.37;_eAED=0.37;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|178
Chr3	exon	80217868	80218404	80217868	ID=MsG0380016193.01.T03:exon:32770;Parent=MsG0380016193.01.T03
Chr3	CDS	80217868	80218404	80217868	ID=MsG0380016193.01.T03:cds;Parent=MsG0380016193.01.T03
Chr3	mRNA	80217958	80218404	80217958	ID=MsG0380016193.01.T04;Parent=MsG0380016193.01;Name=MsG0380016193.01.T04;_AED=0.39;_eAED=0.39;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|148
Chr3	exon	80217958	80218404	80217958	ID=MsG0380016193.01.T04:exon:32771;Parent=MsG0380016193.01.T04
Chr3	CDS	80217958	80218404	80217958	ID=MsG0380016193.01.T04:cds;Parent=MsG0380016193.01.T04
Chr3	mRNA	80218150	80218404	80218150	ID=MsG0380016193.01.T05;Parent=MsG0380016193.01;Name=MsG0380016193.01.T05;_AED=0.44;_eAED=0.44;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|84
Chr3	exon	80218150	80218404	80218150	ID=MsG0380016193.01.T05:exon:32772;Parent=MsG0380016193.01.T05
Chr3	CDS	80218150	80218404	80218150	ID=MsG0380016193.01.T05:cds;Parent=MsG0380016193.01.T05

Gene Sequence

>MsG0380016193.01.T03

ATGATTCTCTCATGTGGGCTTCGTTTAACCCAGGTGGTAACACATTGTTCCTTGAAGAAGATCCTAAATGGGTTCAAACCGTTCTTAAAGATGCACCGGGCCTTCGAGCCCATACCGTTCGTTATCGAACACAGCTCCGTGAAGCTAACAAACTCATCTCCTCCTACCGCAAGGAACCTATGTGTTCACCTTCTAAAGCTTTTCTACGTGGAAACAAAGCATGCAAGCTTGCGCTTGAGAATTTACCTGATGAAGTTTACGATACGGAGTGTGGATCTTATAATGATCGATGCACCGAAAGGGTATTTCGCGGAGGCGCCGGGGAGAATGGCGGCGGTGTTTTCTGCTGCTGTTATGGCGAGGAATAGGAAGGGATCTGGTGTGACGCATGTGTTTTTGCATGATGTGGATCGTAGGGTGGAGAAGCTTTATGCTGATGAGTTTCTTTGCAAGAAGAATTTGGTTAAAGGTGTTGGAAGGCTTTGGCATTTTCAGATAGCACCGTTTAATGGCACTGATTCTCCTCGTTTCTGTTAA

>MsG0380016193.01.T04

ATGCACCGGGCCTTCGAGCCCATACCGTTCGTTATCGAACACAGCTCCGTGAAGCTAACAAACTCATCTCCTCCTACCGCAAGGAACCTATGTGTTCACCTTCTAAAGCTTTTCTACGTGGAAACAAAGCATGCAAGCTTGCGCTTGAGAATTTACCTGATGAAGTTTACGATACGGAGTGTGGATCTTATAATGATCGATGCACCGAAAGGGTATTTCGCGGAGGCGCCGGGGAGAATGGCGGCGGTGTTTTCTGCTGCTGTTATGGCGAGGAATAGGAAGGGATCTGGTGTGACGCATGTGTTTTTGCATGATGTGGATCGTAGGGTGGAGAAGCTTTATGCTGATGAGTTTCTTTGCAAGAAGAATTTGGTTAAAGGTGTTGGAAGGCTTTGGCATTTTCAGATAGCACCGTTTAATGGCACTGATTCTCCTCGTTTCTGTTAA

>MsG0380016193.01.T01

CATGCCACACAAACACAACAAAACAACCACATTACATTAACAACAAAAAATGAAGAACCGTTATTATTATCCTCTCCAACAAAGAAAGCTATTCATAGGATTAACAACAATTGGATTAATAGTCGCTGCATGTTCATAGCCACAGCGATCACAACCTTCGGTACATCCTCGTCACTACATTGTCCAATCTCATCCGGGATCCGAGCCCGATCAAACGACGACAACAATCCATCACCGATCCAACTAAGAGCAATTCTTCACTACGCCACATCACGTGTTGTTCCTCAACAATCGGTCTCAGAGATCAAGATCAGTTTCGATGTCTTAAAAACCTACGATCGACCATGCAACTTTCTTGTCTTCGGACTTGGCCATGATTCTCTCATGTGGGCTTCGTTTAACCCAGGTGGTAACACATTGTTCCTTGAAGAAGATCCTAAATGGGTTCAAACCGTTCTTAAAGATGCACCGGGCCTTCGAGCCCATACCGTTCGTTATCGAACACAGCTCCGTGAAGCTAACAAACTCATCTCCTCCTACCGCAAGGAACCTATGTGTTCACCTTCTAAAGCTTTTCTACGTGGAAACAAAGCATGCAAGCTTGCGCTTGAGAATTTACCTGATGAAGTTTACGATACGGAGTGTGGATCTTATAATGATCGATGCACCGAAAGGGTATTTCGCGGAGGCGCCGGGGAGAATGGCGGCGGTGTTTTCTGCTGCTGTTATGGCGAGGAATAG

>MsG0380016193.01.T05

ATGATCGATGCACCGAAAGGGTATTTCGCGGAGGCGCCGGGGAGAATGGCGGCGGTGTTTTCTGCTGCTGTTATGGCGAGGAATAGGAAGGGATCTGGTGTGACGCATGTGTTTTTGCATGATGTGGATCGTAGGGTGGAGAAGCTTTATGCTGATGAGTTTCTTTGCAAGAAGAATTTGGTTAAAGGTGTTGGAAGGCTTTGGCATTTTCAGATAGCACCGTTTAATGGCACTGATTCTCCTCGTTTCTGTTAA

>MsG0380016193.01.T02

ATGTTCATAGCCACAGCGATCACAACCTTCGGTACATCCTCGTCACTACATTGTCCAATCTCATCCGGGATCCGAGCCCGATCAAACGACGACAACAATCCATCACCGATCCAACTAAGAGCAATTCTTCACTACGCCACATCACGTGTTGTTCCTCAACAATCGGTCTCAGAGATCAAGATCAGTTTCGATGTCTTAAAAACCTACGATCGACCATGCAACTTTCTTGTCTTCGGACTTGGCCATGATTCTCTCATGTGGGCTTCGTTTAACCCAGGTGGTAACACATTGTTCCTTGAAGAAGATCCTAAATGGGTTCAAACCGTTCTTAAAGATGCACCGGGCCTTCGAGCCCATACCGTTCGTTATCGAACACAGCTCCGTGAAGCTAACAAACTCATCTCCTCCTACCGCAAGGAACCTATGTGTTCACCTTCTAAAGCTTTTCTACGTGGAAACAAAGCATGCAAGCTTGCGCTTGAGAATTTACCTGATGAAGTTTACGATACGGAGTGTGGATCTTATAATGATCGATGCACCGAAAGGGTATTTCGCGGAGGCGCCGGGGAGAATGGCGGCGGTGTTTTCTGCTGCTGTTATGGCGAGGAATAG

Protein sequence

>MsG0380016193.01.T03

MILSCGLRLTQVVTHCSLKKILNGFKPFLKMHRAFEPIPFVIEHSSVKLTNSSPPTARNLCVHLLKLFYVETKHASLRLRIYLMKFTIRSVDLIMIDAPKGYFAEAPGRMAAVFSAAVMARNRKGSGVTHVFLHDVDRRVEKLYADEFLCKKNLVKGVGRLWHFQIAPFNGTDSPRFC*

>MsG0380016193.01.T04

MHRAFEPIPFVIEHSSVKLTNSSPPTARNLCVHLLKLFYVETKHASLRLRIYLMKFTIRSVDLIMIDAPKGYFAEAPGRMAAVFSAAVMARNRKGSGVTHVFLHDVDRRVEKLYADEFLCKKNLVKGVGRLWHFQIAPFNGTDSPRFC*

>MsG0380016193.01.T01

HATQTQQNNHITLTTKNEEPLLLSSPTKKAIHRINNNWINSRCMFIATAITTFGTSSSLHCPISSGIRARSNDDNNPSPIQLRAILHYATSRVVPQQSVSEIKISFDVLKTYDRPCNFLVFGLGHDSLMWASFNPGGNTLFLEEDPKWVQTVLKDAPGLRAHTVRYRTQLREANKLISSYRKEPMCSPSKAFLRGNKACKLALENLPDEVYDTECGSYNDRCTERVFRGGAGENGGGVFCCCYGEE*

>MsG0380016193.01.T05

MIDAPKGYFAEAPGRMAAVFSAAVMARNRKGSGVTHVFLHDVDRRVEKLYADEFLCKKNLVKGVGRLWHFQIAPFNGTDSPRFC*

>MsG0380016193.01.T02

MFIATAITTFGTSSSLHCPISSGIRARSNDDNNPSPIQLRAILHYATSRVVPQQSVSEIKISFDVLKTYDRPCNFLVFGLGHDSLMWASFNPGGNTLFLEEDPKWVQTVLKDAPGLRAHTVRYRTQLREANKLISSYRKEPMCSPSKAFLRGNKACKLALENLPDEVYDTECGSYNDRCTERVFRGGAGENGGGVFCCCYGEE*