Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016321.01.T01 | XP_003602005.1 | 99.342 | 152 | 1 | 0 | 1 | 152 | 1 | 152 | 2.53E-108 | 315 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016321.01.T01 | O65657 | 70.886 | 158 | 40 | 3 | 1 | 152 | 1 | 158 | 3.70E-71 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016321.01.T01 | G7J4D3 | 99.342 | 152 | 1 | 0 | 1 | 152 | 1 | 152 | 1.21e-108 | 315 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380016321.01 | MsG0380016326.01 | 0.902908 | 5.989097e-79 | 8.666751e-75 |
| MsG0380016321.01 | MsG0480020739.01 | 0.813236 | 2.834570e-51 | 1.840820e-48 |
| MsG0380016321.01 | MsG0780038401.01 | 0.800043 | 1.734216e-48 | 7.994361e-46 |
| MsG0380016321.01 | MsG0780041305.01 | 0.801701 | 7.952348e-49 | 3.822956e-46 |
| MsG0380016321.01 | MsG0880042939.01 | 0.812268 | 4.618340e-51 | 2.923102e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016321.01.T01 | MTR_3g087770 | 99.342 | 152 | 1 | 0 | 1 | 152 | 1 | 152 | 3.06e-112 | 315 |
| MsG0380016321.01.T01 | MTR_8g091420 | 81.935 | 155 | 23 | 3 | 1 | 152 | 1 | 153 | 1.35e-79 | 232 |
| MsG0380016321.01.T01 | MTR_1g030630 | 56.376 | 149 | 61 | 3 | 5 | 152 | 2 | 147 | 6.26e-56 | 172 |
| MsG0380016321.01.T01 | MTR_3g073670 | 59.091 | 154 | 56 | 3 | 1 | 152 | 1 | 149 | 1.64e-55 | 171 |
| MsG0380016321.01.T01 | MTR_5g022620 | 55.769 | 156 | 61 | 4 | 5 | 152 | 2 | 157 | 2.01e-53 | 166 |
| MsG0380016321.01.T01 | MTR_3g117890 | 53.750 | 160 | 57 | 5 | 5 | 152 | 2 | 156 | 2.41e-52 | 163 |
| MsG0380016321.01.T01 | MTR_4g073040 | 54.194 | 155 | 64 | 4 | 5 | 152 | 2 | 156 | 7.42e-52 | 162 |
| MsG0380016321.01.T01 | MTR_6g003990 | 50.649 | 154 | 70 | 3 | 5 | 152 | 2 | 155 | 2.73e-51 | 160 |
| MsG0380016321.01.T01 | MTR_5g025150 | 52.027 | 148 | 67 | 1 | 5 | 152 | 2 | 145 | 6.57e-51 | 159 |
| MsG0380016321.01.T01 | MTR_7g083060 | 57.364 | 129 | 53 | 2 | 25 | 152 | 19 | 146 | 2.51e-47 | 150 |
| MsG0380016321.01.T01 | MTR_6g003990 | 53.390 | 118 | 52 | 2 | 38 | 152 | 1 | 118 | 3.29e-42 | 136 |
| MsG0380016321.01.T01 | MTR_5g055020 | 47.967 | 123 | 64 | 0 | 30 | 152 | 25 | 147 | 2.56e-40 | 132 |
| MsG0380016321.01.T01 | MTR_6g026890 | 39.456 | 147 | 77 | 4 | 17 | 152 | 3 | 148 | 2.87e-28 | 102 |
| MsG0380016321.01.T01 | MTR_1g078090 | 41.045 | 134 | 69 | 3 | 29 | 152 | 52 | 185 | 1.27e-27 | 101 |
| MsG0380016321.01.T01 | MTR_2g091235 | 35.135 | 148 | 66 | 5 | 29 | 152 | 1 | 142 | 6.38e-22 | 85.9 |
| MsG0380016321.01.T01 | MTR_6g045203 | 39.706 | 136 | 67 | 4 | 32 | 152 | 5 | 140 | 3.87e-18 | 75.9 |
| MsG0380016321.01.T01 | MTR_1g082650 | 53.731 | 67 | 31 | 0 | 28 | 94 | 8 | 74 | 4.92e-15 | 71.6 |
| MsG0380016321.01.T01 | MTR_1g107565 | 50.746 | 67 | 33 | 0 | 28 | 94 | 11 | 77 | 8.11e-15 | 70.5 |
| MsG0380016321.01.T01 | MTR_2g022250 | 47.761 | 67 | 35 | 0 | 28 | 94 | 8 | 74 | 7.51e-14 | 68.2 |
| MsG0380016321.01.T01 | MTR_1g092670 | 49.231 | 65 | 33 | 0 | 30 | 94 | 4 | 68 | 1.09e-13 | 62.8 |
| MsG0380016321.01.T01 | MTR_7g013660 | 47.692 | 65 | 34 | 0 | 30 | 94 | 4 | 68 | 1.25e-13 | 63.9 |
| MsG0380016321.01.T01 | MTR_7g108560 | 49.231 | 65 | 33 | 0 | 30 | 94 | 22 | 86 | 1.35e-13 | 66.6 |
| MsG0380016321.01.T01 | MTR_4g094238 | 38.824 | 85 | 49 | 2 | 29 | 113 | 1 | 82 | 1.47e-13 | 62.8 |
| MsG0380016321.01.T01 | MTR_4g117140 | 46.269 | 67 | 36 | 0 | 28 | 94 | 8 | 74 | 3.11e-13 | 66.2 |
| MsG0380016321.01.T01 | MTR_4g117220 | 46.269 | 67 | 36 | 0 | 28 | 94 | 8 | 74 | 3.37e-13 | 66.2 |
| MsG0380016321.01.T01 | MTR_7g113110 | 48.387 | 62 | 32 | 0 | 34 | 95 | 37 | 98 | 1.14e-12 | 64.3 |
| MsG0380016321.01.T01 | MTR_3g067750 | 46.875 | 64 | 34 | 0 | 30 | 93 | 12 | 75 | 5.22e-12 | 61.2 |
| MsG0380016321.01.T01 | MTR_4g119820 | 46.970 | 66 | 35 | 0 | 30 | 95 | 74 | 139 | 1.46e-11 | 61.2 |
| MsG0380016321.01.T01 | MTR_1g083310 | 44.776 | 67 | 36 | 1 | 30 | 95 | 15 | 81 | 2.91e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016321.01.T01 | AT4G39700 | 70.886 | 158 | 40 | 3 | 1 | 152 | 1 | 158 | 3.77e-72 | 214 |
| MsG0380016321.01.T01 | AT1G22990 | 56.579 | 152 | 61 | 3 | 5 | 152 | 2 | 152 | 8.38e-58 | 177 |
| MsG0380016321.01.T01 | AT1G71050 | 59.355 | 155 | 57 | 3 | 1 | 152 | 1 | 152 | 7.60e-56 | 172 |
| MsG0380016321.01.T01 | AT1G22990 | 55.034 | 149 | 63 | 3 | 5 | 152 | 2 | 147 | 7.52e-55 | 169 |
| MsG0380016321.01.T01 | AT4G38580 | 54.902 | 153 | 63 | 3 | 5 | 152 | 2 | 153 | 1.28e-54 | 169 |
| MsG0380016321.01.T01 | AT4G38580 | 54.902 | 153 | 63 | 3 | 5 | 152 | 2 | 153 | 1.28e-54 | 169 |
| MsG0380016321.01.T01 | AT4G08570 | 55.844 | 154 | 62 | 3 | 1 | 152 | 1 | 150 | 5.08e-54 | 167 |
| MsG0380016321.01.T01 | AT5G17450 | 50.667 | 150 | 70 | 4 | 5 | 152 | 2 | 149 | 5.94e-46 | 147 |
| MsG0380016321.01.T01 | AT5G66110 | 51.007 | 149 | 63 | 4 | 10 | 152 | 3 | 147 | 9.15e-45 | 144 |
| MsG0380016321.01.T01 | AT5G66110 | 51.007 | 149 | 63 | 4 | 10 | 152 | 3 | 147 | 9.15e-45 | 144 |
| MsG0380016321.01.T01 | AT4G35060 | 47.403 | 154 | 73 | 4 | 5 | 152 | 2 | 153 | 2.09e-43 | 140 |
| MsG0380016321.01.T01 | AT5G66110 | 52.893 | 121 | 51 | 3 | 38 | 152 | 1 | 121 | 5.49e-38 | 126 |
| MsG0380016321.01.T01 | AT5G17450 | 55.556 | 99 | 41 | 3 | 56 | 152 | 8 | 105 | 3.42e-31 | 108 |
| MsG0380016321.01.T01 | AT1G06330 | 38.961 | 154 | 60 | 5 | 29 | 152 | 1 | 150 | 1.33e-26 | 98.2 |
| MsG0380016321.01.T01 | AT3G56891 | 39.216 | 153 | 63 | 6 | 29 | 152 | 15 | 166 | 6.44e-25 | 94.4 |
| MsG0380016321.01.T01 | AT2G18196 | 36.301 | 146 | 81 | 5 | 19 | 152 | 33 | 178 | 2.77e-24 | 92.8 |
| MsG0380016321.01.T01 | AT4G10465 | 38.849 | 139 | 75 | 3 | 24 | 152 | 45 | 183 | 1.91e-23 | 90.9 |
| MsG0380016321.01.T01 | AT3G56891 | 38.194 | 144 | 59 | 6 | 38 | 152 | 1 | 143 | 2.54e-22 | 87.0 |
| MsG0380016321.01.T01 | AT1G29100 | 37.584 | 149 | 61 | 4 | 31 | 152 | 4 | 147 | 3.14e-21 | 84.3 |
| MsG0380016321.01.T01 | AT1G29100 | 36.986 | 146 | 60 | 4 | 34 | 152 | 1 | 141 | 5.67e-20 | 80.9 |
| MsG0380016321.01.T01 | AT2G18196 | 35.200 | 125 | 71 | 4 | 38 | 152 | 1 | 125 | 4.32e-19 | 78.2 |
| MsG0380016321.01.T01 | AT3G48970 | 38.686 | 137 | 69 | 4 | 31 | 152 | 4 | 140 | 7.70e-15 | 67.4 |
| MsG0380016321.01.T01 | AT3G48970 | 38.686 | 137 | 69 | 4 | 31 | 152 | 2 | 138 | 9.21e-15 | 67.4 |
| MsG0380016321.01.T01 | AT3G48970 | 38.686 | 137 | 69 | 4 | 31 | 152 | 2 | 138 | 9.21e-15 | 67.4 |
| MsG0380016321.01.T01 | AT1G66240 | 44.444 | 72 | 40 | 0 | 23 | 94 | 26 | 97 | 7.62e-14 | 63.9 |
| MsG0380016321.01.T01 | AT5G27690 | 48.387 | 62 | 32 | 0 | 34 | 95 | 34 | 95 | 1.52e-13 | 67.0 |
| MsG0380016321.01.T01 | AT3G06130 | 48.485 | 66 | 34 | 0 | 29 | 94 | 9 | 74 | 2.12e-13 | 66.6 |
| MsG0380016321.01.T01 | AT3G56240 | 50.000 | 66 | 33 | 0 | 30 | 95 | 3 | 68 | 2.89e-13 | 62.8 |
| MsG0380016321.01.T01 | AT3G56240 | 50.000 | 66 | 33 | 0 | 30 | 95 | 3 | 68 | 2.89e-13 | 62.8 |
| MsG0380016321.01.T01 | AT3G06130 | 47.761 | 67 | 35 | 0 | 28 | 94 | 8 | 74 | 4.00e-13 | 65.9 |
| MsG0380016321.01.T01 | AT5G19090 | 46.269 | 67 | 36 | 0 | 28 | 94 | 8 | 74 | 3.66e-12 | 63.2 |
| MsG0380016321.01.T01 | AT5G19090 | 46.269 | 67 | 36 | 0 | 28 | 94 | 8 | 74 | 3.66e-12 | 63.2 |
| MsG0380016321.01.T01 | AT5G19090 | 46.269 | 67 | 36 | 0 | 28 | 94 | 8 | 74 | 3.66e-12 | 63.2 |
| MsG0380016321.01.T01 | AT5G19090 | 46.269 | 67 | 36 | 0 | 28 | 94 | 8 | 74 | 4.65e-12 | 62.8 |
| MsG0380016321.01.T01 | AT5G19090 | 46.269 | 67 | 36 | 0 | 28 | 94 | 8 | 74 | 4.65e-12 | 62.8 |
| MsG0380016321.01.T01 | AT1G56210 | 49.231 | 65 | 33 | 0 | 34 | 98 | 44 | 108 | 5.63e-12 | 62.4 |
| MsG0380016321.01.T01 | AT1G23000 | 42.857 | 70 | 40 | 0 | 29 | 98 | 72 | 141 | 1.84e-11 | 61.2 |
| MsG0380016321.01.T01 | AT1G23000 | 42.857 | 70 | 40 | 0 | 29 | 98 | 12 | 81 | 2.02e-11 | 60.8 |
| MsG0380016321.01.T01 | AT5G37860 | 40.845 | 71 | 42 | 0 | 29 | 99 | 9 | 79 | 3.78e-11 | 59.7 |
Find 41 sgRNAs with CRISPR-Local
Find 54 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTATCATCATCTACATAA+TGG | 0.292404 | 3:+81959199 | None:intergenic |
| TACATAATGGAGCAGGCATT+TGG | 0.304332 | 3:+81959212 | None:intergenic |
| AGAGTACTTATCTGATCTAA+TGG | 0.306737 | 3:-81959904 | MsG0380016321.01.T01:CDS |
| TAAAATCAGTGGAGATAAAC+AGG | 0.372946 | 3:-81959478 | MsG0380016321.01.T01:CDS |
| TTGCGATGGTTGCGAACTTA+AGG | 0.383976 | 3:-81959808 | MsG0380016321.01.T01:CDS |
| ACCATGTTGTATGGCACATA+AGG | 0.433890 | 3:+81959365 | None:intergenic |
| AGCAAAGTCAACAGGAAAGA+AGG | 0.439458 | 3:-81959399 | MsG0380016321.01.T01:CDS |
| CAGGAAAGAAGGCAGAGATT+TGG | 0.440709 | 3:-81959388 | MsG0380016321.01.T01:CDS |
| ACATAATGGAGCAGGCATTT+GGG | 0.448683 | 3:+81959213 | None:intergenic |
| GGGGTATGTAGAGGCAAATA+AGG | 0.452605 | 3:-81959432 | MsG0380016321.01.T01:CDS |
| TCCTGGATATGTAAGGAGAT+TGG | 0.456785 | 3:-81959300 | MsG0380016321.01.T01:CDS |
| TCCAATCTCCTTACATATCC+AGG | 0.463407 | 3:+81959299 | None:intergenic |
| CTAAAGAAAGCAAAGTCAAC+AGG | 0.471841 | 3:-81959407 | MsG0380016321.01.T01:CDS |
| GAGTACTTATCTGATCTAAT+GGG | 0.482086 | 3:-81959903 | MsG0380016321.01.T01:CDS |
| AAAGCCCTCTCTTCAATGAA+TGG | 0.498175 | 3:-81959780 | MsG0380016321.01.T01:intron |
| ATTACAGACCGTAGAGTTGA+AGG | 0.499504 | 3:-81959841 | MsG0380016321.01.T01:CDS |
| TATGACAAGAAGGCTCCTCC+TGG | 0.508900 | 3:-81959317 | MsG0380016321.01.T01:CDS |
| CGTAGAGTTGAAGGTGAGGA+TGG | 0.509056 | 3:-81959832 | MsG0380016321.01.T01:CDS |
| CTTACCATTCATTGAAGAGA+GGG | 0.529075 | 3:+81959776 | None:intergenic |
| ATATACACAGAAATGGGAGT+TGG | 0.529253 | 3:-81959936 | None:intergenic |
| AGGCTCCTCCTGGATATGTA+AGG | 0.531905 | 3:-81959307 | MsG0380016321.01.T01:CDS |
| GGAGCCTTCTTGTCATAAGA+AGG | 0.533318 | 3:+81959323 | None:intergenic |
| GGATGAGCCACCATGTTGTA+TGG | 0.533759 | 3:+81959356 | None:intergenic |
| TCATAAGAAGGAGCAGCGTA+TGG | 0.549598 | 3:+81959335 | None:intergenic |
| TACACAGAAATGGGAGTTGG+AGG | 0.552311 | 3:-81959933 | None:intergenic |
| CATCATCTACATAATGGAGC+AGG | 0.555456 | 3:+81959205 | None:intergenic |
| TGCTCCTTCTTATGACAAGA+AGG | 0.562724 | 3:-81959327 | MsG0380016321.01.T01:CDS |
| GTAAGGAGATTGGAGACCAC+TGG | 0.572647 | 3:-81959290 | MsG0380016321.01.T01:CDS |
| TTATCTGATCTAATGGGCAG+TGG | 0.573748 | 3:-81959897 | MsG0380016321.01.T01:CDS |
| CATCCTCACCTTCAACTCTA+CGG | 0.585179 | 3:+81959833 | None:intergenic |
| GACAGTAACGGGGTATGTAG+AGG | 0.602619 | 3:-81959441 | MsG0380016321.01.T01:CDS |
| ACTTACCATTCATTGAAGAG+AGG | 0.616934 | 3:+81959775 | None:intergenic |
| CATCACTAAACATGGTGGTG+AGG | 0.624282 | 3:+81959240 | None:intergenic |
| GCCTTATGTGCCATACAACA+TGG | 0.647674 | 3:-81959366 | MsG0380016321.01.T01:CDS |
| ATATGCTCTAACAGTTCCAG+TGG | 0.649114 | 3:+81959274 | None:intergenic |
| AAGGTGAGGATGGATTGCGA+TGG | 0.658836 | 3:-81959822 | MsG0380016321.01.T01:CDS |
| CTAAACATGGTGGTGAGGTG+TGG | 0.665051 | 3:+81959245 | None:intergenic |
| AGACCGTAGAGTTGAAGGTG+AGG | 0.688480 | 3:-81959836 | MsG0380016321.01.T01:CDS |
| TGATGCAGGAGTAAAATCAG+TGG | 0.694945 | 3:-81959489 | MsG0380016321.01.T01:intron |
| TTATGTGCCATACAACATGG+TGG | 0.751150 | 3:-81959363 | MsG0380016321.01.T01:CDS |
| AATCTCCTTACATATCCAGG+AGG | 0.766746 | 3:+81959302 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATTTTTTTTTTTTTTTG+TGG | - | Chr3:81959623-81959642 | MsG0380016321.01.T01:intron | 10.0% |
| !! | AGAGAAAGATAAATTAATAG+AGG | + | Chr3:81959395-81959414 | None:intergenic | 20.0% |
| !! | GAGAAAGATAAATTAATAGA+GGG | + | Chr3:81959394-81959413 | None:intergenic | 20.0% |
| ! | TCAAATTATAATTAGTGCGT+CGG | - | Chr3:81959505-81959524 | MsG0380016321.01.T01:intron | 25.0% |
| ACAACAAAAAGTGACAGTAA+CGG | - | Chr3:81959682-81959701 | MsG0380016321.01.T01:intron | 30.0% | |
| GAGTACTTATCTGATCTAAT+GGG | - | Chr3:81959232-81959251 | MsG0380016321.01.T01:CDS | 30.0% | |
| TAAAATCAGTGGAGATAAAC+AGG | - | Chr3:81959657-81959676 | MsG0380016321.01.T01:intron | 30.0% | |
| TATCTTTCTCTATATAGCAC+CGG | - | Chr3:81959404-81959423 | MsG0380016321.01.T01:CDS | 30.0% | |
| ! | AGAGTACTTATCTGATCTAA+TGG | - | Chr3:81959231-81959250 | MsG0380016321.01.T01:CDS | 30.0% |
| ! | TCTTCTTCTTGATTTTGTGA+TGG | + | Chr3:81959270-81959289 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTGTGGTGATGC+AGG | - | Chr3:81959632-81959651 | MsG0380016321.01.T01:intron | 30.0% |
| AACAAAAAGTGACAGTAACG+GGG | - | Chr3:81959684-81959703 | MsG0380016321.01.T01:intron | 35.0% | |
| ACTTACCATTCATTGAAGAG+AGG | + | Chr3:81959363-81959382 | None:intergenic | 35.0% | |
| CAACAAAAAGTGACAGTAAC+GGG | - | Chr3:81959683-81959702 | MsG0380016321.01.T01:intron | 35.0% | |
| CTAAAGAAAGCAAAGTCAAC+AGG | - | Chr3:81959728-81959747 | MsG0380016321.01.T01:intron | 35.0% | |
| CTTACCATTCATTGAAGAGA+GGG | + | Chr3:81959362-81959381 | None:intergenic | 35.0% | |
| GCTTGCTTGCATTATATGTA+TGG | - | Chr3:81959561-81959580 | MsG0380016321.01.T01:intron | 35.0% | |
| ! | GTTTTCATCACTAAACATGG+TGG | + | Chr3:81959903-81959922 | None:intergenic | 35.0% |
| ! | TCTTCTTGATTTTGTGATGG+TGG | + | Chr3:81959267-81959286 | None:intergenic | 35.0% |
| ! | TGGGTTTTCATCACTAAACA+TGG | + | Chr3:81959906-81959925 | None:intergenic | 35.0% |
| AAAGCCCTCTCTTCAATGAA+TGG | - | Chr3:81959355-81959374 | MsG0380016321.01.T01:CDS | 40.0% | |
| AATCTCCTTACATATCCAGG+AGG | + | Chr3:81959836-81959855 | None:intergenic | 40.0% | |
| ACCATGTTGTATGGCACATA+AGG | + | Chr3:81959773-81959792 | None:intergenic | 40.0% | |
| ACGTCATCAATATGAAGTGC+CGG | + | Chr3:81959426-81959445 | None:intergenic | 40.0% | |
| AGCAAAGTCAACAGGAAAGA+AGG | - | Chr3:81959736-81959755 | MsG0380016321.01.T01:intron | 40.0% | |
| ATATGCTCTAACAGTTCCAG+TGG | + | Chr3:81959864-81959883 | None:intergenic | 40.0% | |
| ATTACAGACCGTAGAGTTGA+AGG | - | Chr3:81959294-81959313 | MsG0380016321.01.T01:CDS | 40.0% | |
| TCCAATCTCCTTACATATCC+AGG | + | Chr3:81959839-81959858 | None:intergenic | 40.0% | |
| TCCTGGATATGTAAGGAGAT+TGG | - | Chr3:81959835-81959854 | MsG0380016321.01.T01:CDS | 40.0% | |
| TGATGCAGGAGTAAAATCAG+TGG | - | Chr3:81959646-81959665 | MsG0380016321.01.T01:intron | 40.0% | |
| TGCTCCTTCTTATGACAAGA+AGG | - | Chr3:81959808-81959827 | MsG0380016321.01.T01:CDS | 40.0% | |
| TTATGTGCCATACAACATGG+TGG | - | Chr3:81959772-81959791 | MsG0380016321.01.T01:intron | 40.0% | |
| ! | ACATAATGGAGCAGGCATTT+GGG | + | Chr3:81959925-81959944 | None:intergenic | 40.0% |
| ! | TACATAATGGAGCAGGCATT+TGG | + | Chr3:81959926-81959945 | None:intergenic | 40.0% |
| ! | TTATCTGATCTAATGGGCAG+TGG | - | Chr3:81959238-81959257 | MsG0380016321.01.T01:CDS | 40.0% |
| CAGGAAAGAAGGCAGAGATT+TGG | - | Chr3:81959747-81959766 | MsG0380016321.01.T01:intron | 45.0% | |
| CATCCTCACCTTCAACTCTA+CGG | + | Chr3:81959305-81959324 | None:intergenic | 45.0% | |
| GCCTTATGTGCCATACAACA+TGG | - | Chr3:81959769-81959788 | MsG0380016321.01.T01:intron | 45.0% | |
| GGAGCCTTCTTGTCATAAGA+AGG | + | Chr3:81959815-81959834 | None:intergenic | 45.0% | |
| GGGGTATGTAGAGGCAAATA+AGG | - | Chr3:81959703-81959722 | MsG0380016321.01.T01:intron | 45.0% | |
| TCATAAGAAGGAGCAGCGTA+TGG | + | Chr3:81959803-81959822 | None:intergenic | 45.0% | |
| TTGCGATGGTTGCGAACTTA+AGG | - | Chr3:81959327-81959346 | MsG0380016321.01.T01:CDS | 45.0% | |
| ! | CATCACTAAACATGGTGGTG+AGG | + | Chr3:81959898-81959917 | None:intergenic | 45.0% |
| AGACCGTAGAGTTGAAGGTG+AGG | - | Chr3:81959299-81959318 | MsG0380016321.01.T01:CDS | 50.0% | |
| AGGCTCCTCCTGGATATGTA+AGG | - | Chr3:81959828-81959847 | MsG0380016321.01.T01:CDS | 50.0% | |
| CGTAGAGTTGAAGGTGAGGA+TGG | - | Chr3:81959303-81959322 | MsG0380016321.01.T01:CDS | 50.0% | |
| CGTCTGACATCACTGACACA+TGG | - | Chr3:81959452-81959471 | MsG0380016321.01.T01:CDS | 50.0% | |
| GGATGAGCCACCATGTTGTA+TGG | + | Chr3:81959782-81959801 | None:intergenic | 50.0% | |
| GTAAGGAGATTGGAGACCAC+TGG | - | Chr3:81959845-81959864 | MsG0380016321.01.T01:CDS | 50.0% | |
| GTGTCAGTGATGTCAGACGT+TGG | + | Chr3:81959451-81959470 | None:intergenic | 50.0% | |
| TATGACAAGAAGGCTCCTCC+TGG | - | Chr3:81959818-81959837 | MsG0380016321.01.T01:CDS | 50.0% | |
| ! | CTAAACATGGTGGTGAGGTG+TGG | + | Chr3:81959893-81959912 | None:intergenic | 50.0% |
| ! | GACAGTAACGGGGTATGTAG+AGG | - | Chr3:81959694-81959713 | MsG0380016321.01.T01:intron | 50.0% |
| !! | AAGGTGAGGATGGATTGCGA+TGG | - | Chr3:81959313-81959332 | MsG0380016321.01.T01:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 81959211 | 81959946 | 81959211 | ID=MsG0380016321.01;Name=MsG0380016321.01 |
| Chr3 | mRNA | 81959211 | 81959946 | 81959211 | ID=MsG0380016321.01.T01;Parent=MsG0380016321.01;Name=MsG0380016321.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|152 |
| Chr3 | exon | 81959781 | 81959946 | 81959781 | ID=MsG0380016321.01.T01:exon:11670;Parent=MsG0380016321.01.T01 |
| Chr3 | exon | 81959211 | 81959503 | 81959211 | ID=MsG0380016321.01.T01:exon:11669;Parent=MsG0380016321.01.T01 |
| Chr3 | CDS | 81959781 | 81959946 | 81959781 | ID=MsG0380016321.01.T01:cds;Parent=MsG0380016321.01.T01 |
| Chr3 | CDS | 81959211 | 81959503 | 81959211 | ID=MsG0380016321.01.T01:cds;Parent=MsG0380016321.01.T01 |
| Gene Sequence |
| Protein sequence |
