Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016710.01.T01 | XP_013461496.1 | 92.357 | 157 | 9 | 2 | 1 | 155 | 1 | 156 | 2.35E-99 | 292 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016710.01.T01 | Q9FPR6 | 72.308 | 130 | 36 | 0 | 19 | 148 | 21 | 150 | 2.38E-63 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016710.01.T01 | A0A072V1G2 | 92.357 | 157 | 9 | 2 | 1 | 155 | 1 | 156 | 1.12e-99 | 292 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0380016710.01.T01 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180003741.01 | MsG0380016710.01 | 0.806103 | 9.677327e-50 | 5.207893e-47 |
| MsG0380016710.01 | MsG0580029310.01 | 0.801084 | 1.063958e-48 | 5.036116e-46 |
| MsG0380016710.01 | MsG0680031959.01 | 0.825506 | 4.517069e-54 | 4.125034e-51 |
| MsG0380016710.01 | MsG0780041259.01 | 0.827613 | 1.420299e-54 | 1.377981e-51 |
| MsG0380016710.01 | MsG0780041698.01 | 0.813574 | 2.388859e-51 | 1.565823e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016710.01.T01 | MTR_3g093860 | 92.357 | 157 | 9 | 2 | 1 | 155 | 1 | 156 | 2.85e-103 | 292 |
| MsG0380016710.01.T01 | MTR_1g049100 | 60.448 | 134 | 52 | 1 | 14 | 146 | 4 | 137 | 6.25e-55 | 171 |
| MsG0380016710.01.T01 | MTR_3g078613 | 60.769 | 130 | 50 | 1 | 19 | 148 | 24 | 152 | 1.02e-54 | 171 |
| MsG0380016710.01.T01 | MTR_3g078613 | 61.069 | 131 | 49 | 2 | 19 | 148 | 24 | 153 | 1.86e-53 | 168 |
| MsG0380016710.01.T01 | MTR_5g036480 | 60.606 | 132 | 47 | 2 | 19 | 146 | 17 | 147 | 5.17e-52 | 165 |
| MsG0380016710.01.T01 | MTR_8g038620 | 57.353 | 136 | 51 | 1 | 19 | 147 | 10 | 145 | 1.15e-51 | 162 |
| MsG0380016710.01.T01 | MTR_4g106590 | 60.305 | 131 | 50 | 2 | 19 | 148 | 27 | 156 | 1.71e-51 | 163 |
| MsG0380016710.01.T01 | MTR_7g490310 | 59.091 | 132 | 46 | 2 | 19 | 142 | 10 | 141 | 1.57e-50 | 162 |
| MsG0380016710.01.T01 | MTR_3g088630 | 53.191 | 141 | 48 | 2 | 19 | 142 | 23 | 162 | 7.22e-46 | 150 |
| MsG0380016710.01.T01 | MTR_3g015490 | 52.143 | 140 | 50 | 3 | 19 | 147 | 5 | 138 | 6.15e-43 | 140 |
| MsG0380016710.01.T01 | MTR_6g007460 | 40.659 | 182 | 54 | 3 | 19 | 147 | 12 | 192 | 6.86e-37 | 126 |
| MsG0380016710.01.T01 | MTR_2g050020 | 91.379 | 58 | 4 | 1 | 1 | 58 | 35 | 91 | 1.00e-30 | 107 |
| MsG0380016710.01.T01 | MTR_4g051330 | 56.863 | 51 | 22 | 0 | 97 | 147 | 77 | 127 | 3.81e-16 | 71.2 |
| MsG0380016710.01.T01 | MTR_4g061360 | 34.959 | 123 | 70 | 1 | 20 | 142 | 91 | 203 | 8.83e-16 | 73.9 |
| MsG0380016710.01.T01 | MTR_1g067110 | 34.959 | 123 | 70 | 1 | 20 | 142 | 87 | 199 | 6.61e-15 | 71.2 |
| MsG0380016710.01.T01 | MTR_1g067110 | 34.959 | 123 | 70 | 1 | 20 | 142 | 87 | 199 | 8.04e-15 | 70.9 |
| MsG0380016710.01.T01 | MTR_3g092780 | 30.645 | 124 | 74 | 2 | 20 | 142 | 58 | 170 | 7.48e-14 | 68.2 |
| MsG0380016710.01.T01 | MTR_3g092780 | 30.645 | 124 | 74 | 2 | 20 | 142 | 58 | 170 | 7.48e-14 | 68.2 |
| MsG0380016710.01.T01 | MTR_3g092780 | 30.645 | 124 | 74 | 2 | 20 | 142 | 58 | 170 | 7.63e-14 | 68.2 |
| MsG0380016710.01.T01 | MTR_3g092780 | 30.645 | 124 | 74 | 2 | 20 | 142 | 58 | 170 | 7.93e-14 | 68.2 |
| MsG0380016710.01.T01 | MTR_8g024260 | 30.894 | 123 | 75 | 1 | 20 | 142 | 38 | 150 | 3.23e-13 | 66.2 |
| MsG0380016710.01.T01 | MTR_7g118260 | 30.894 | 123 | 75 | 1 | 20 | 142 | 16 | 128 | 4.41e-13 | 65.9 |
| MsG0380016710.01.T01 | MTR_7g118260 | 30.894 | 123 | 75 | 1 | 20 | 142 | 16 | 128 | 5.16e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016710.01.T01 | AT3G56380 | 72.308 | 130 | 36 | 0 | 19 | 148 | 21 | 150 | 2.43e-64 | 194 |
| MsG0380016710.01.T01 | AT3G56380 | 72.519 | 131 | 35 | 1 | 19 | 148 | 21 | 151 | 4.88e-63 | 191 |
| MsG0380016710.01.T01 | AT2G40670 | 70.896 | 134 | 33 | 2 | 19 | 148 | 30 | 161 | 7.35e-63 | 191 |
| MsG0380016710.01.T01 | AT2G40670 | 71.111 | 135 | 32 | 3 | 19 | 148 | 30 | 162 | 1.50e-61 | 187 |
| MsG0380016710.01.T01 | AT1G10470 | 61.719 | 128 | 48 | 1 | 19 | 146 | 21 | 147 | 3.43e-53 | 169 |
| MsG0380016710.01.T01 | AT1G59940 | 58.647 | 133 | 54 | 1 | 14 | 146 | 29 | 160 | 4.99e-53 | 168 |
| MsG0380016710.01.T01 | AT1G10470 | 61.719 | 128 | 48 | 1 | 19 | 146 | 35 | 161 | 6.36e-53 | 168 |
| MsG0380016710.01.T01 | AT1G59940 | 58.647 | 133 | 54 | 1 | 14 | 146 | 121 | 252 | 7.45e-52 | 167 |
| MsG0380016710.01.T01 | AT3G48100 | 57.364 | 129 | 55 | 0 | 19 | 147 | 26 | 154 | 1.34e-51 | 162 |
| MsG0380016710.01.T01 | AT5G62920 | 58.955 | 134 | 54 | 1 | 19 | 152 | 26 | 158 | 3.22e-51 | 162 |
| MsG0380016710.01.T01 | AT3G57040 | 53.623 | 138 | 55 | 1 | 19 | 147 | 10 | 147 | 6.46e-51 | 162 |
| MsG0380016710.01.T01 | AT3G57040 | 53.623 | 138 | 55 | 1 | 19 | 147 | 10 | 147 | 6.46e-51 | 162 |
| MsG0380016710.01.T01 | AT2G41310 | 51.724 | 145 | 63 | 2 | 10 | 147 | 1 | 145 | 2.33e-50 | 161 |
| MsG0380016710.01.T01 | AT1G74890 | 59.091 | 132 | 53 | 1 | 19 | 150 | 19 | 149 | 5.99e-50 | 159 |
| MsG0380016710.01.T01 | AT1G19050 | 58.015 | 131 | 52 | 2 | 19 | 148 | 25 | 153 | 3.46e-49 | 157 |
| MsG0380016710.01.T01 | AT1G10470 | 50.000 | 74 | 33 | 3 | 75 | 146 | 14 | 85 | 3.19e-15 | 69.7 |
| MsG0380016710.01.T01 | AT5G24470 | 31.452 | 124 | 73 | 2 | 20 | 142 | 52 | 164 | 7.07e-14 | 68.2 |
| MsG0380016710.01.T01 | AT5G02810 | 31.707 | 123 | 74 | 1 | 20 | 142 | 80 | 192 | 2.13e-12 | 64.3 |
| MsG0380016710.01.T01 | AT5G60100 | 33.333 | 123 | 72 | 1 | 20 | 142 | 66 | 178 | 2.30e-12 | 63.9 |
| MsG0380016710.01.T01 | AT5G60100 | 33.333 | 123 | 72 | 1 | 20 | 142 | 66 | 178 | 2.30e-12 | 63.9 |
| MsG0380016710.01.T01 | AT5G60100 | 33.333 | 123 | 72 | 1 | 20 | 142 | 66 | 178 | 2.30e-12 | 63.9 |
| MsG0380016710.01.T01 | AT5G60100 | 33.333 | 123 | 72 | 1 | 20 | 142 | 66 | 178 | 2.32e-12 | 63.9 |
| MsG0380016710.01.T01 | AT5G60100 | 33.333 | 123 | 72 | 1 | 20 | 142 | 66 | 178 | 5.29e-12 | 62.8 |
| MsG0380016710.01.T01 | AT5G60100 | 33.333 | 123 | 72 | 1 | 20 | 142 | 66 | 178 | 5.29e-12 | 62.8 |
| MsG0380016710.01.T01 | AT5G60100 | 33.333 | 123 | 72 | 1 | 20 | 142 | 66 | 178 | 5.29e-12 | 62.8 |
| MsG0380016710.01.T01 | AT2G46790 | 28.226 | 124 | 79 | 1 | 19 | 142 | 38 | 151 | 1.90e-11 | 61.2 |
| MsG0380016710.01.T01 | AT2G46790 | 28.226 | 124 | 79 | 1 | 19 | 142 | 38 | 151 | 2.29e-11 | 61.2 |
| MsG0380016710.01.T01 | AT5G07210 | 30.081 | 123 | 72 | 3 | 20 | 142 | 18 | 126 | 3.30e-11 | 60.8 |
Find 39 sgRNAs with CRISPR-Local
Find 61 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGAAGGCATTGGAGTATT+TGG | 0.158019 | 3:-86903553 | MsG0380016710.01.T01:CDS |
| GACAGGCCAGCTGATGAATT+TGG | 0.201243 | 3:-86902932 | MsG0380016710.01.T01:CDS |
| ACAGTGACAACTGCTGAAAA+TGG | 0.248549 | 3:-86903576 | MsG0380016710.01.T01:intron |
| CTGAAGGCATTGGAGTATTT+GGG | 0.249714 | 3:-86903552 | MsG0380016710.01.T01:CDS |
| GTAGGGACCCAAAGTGAATT+TGG | 0.331645 | 3:-86903356 | MsG0380016710.01.T01:intron |
| AATTACTTGTTGATCCTTGT+TGG | 0.359191 | 3:+86903108 | None:intergenic |
| TCAAAGTGGGTGATGGAAAA+TGG | 0.361841 | 3:-86903875 | MsG0380016710.01.T01:CDS |
| TGAGTTGCTTAAGAAAATTA+AGG | 0.374516 | 3:-86903296 | MsG0380016710.01.T01:intron |
| ACAGGCCAGCTGATGAATTT+GGG | 0.393986 | 3:-86902931 | MsG0380016710.01.T01:CDS |
| TACTGCATGCCAGGGATGAC+TGG | 0.411671 | 3:-86903322 | MsG0380016710.01.T01:CDS |
| GTGATGACCAAATTCACTTT+GGG | 0.424646 | 3:+86903349 | None:intergenic |
| ATCACAGACTACTGCATGCC+AGG | 0.428078 | 3:-86903331 | MsG0380016710.01.T01:CDS |
| TTCTTCTTCAAAGTGGGTGA+TGG | 0.456607 | 3:-86903882 | MsG0380016710.01.T01:CDS |
| CTGATTCTTCTTCTTCAAAG+TGG | 0.467692 | 3:-86903889 | MsG0380016710.01.T01:CDS |
| TGATTCTTCTTCTTCAAAGT+GGG | 0.471982 | 3:-86903888 | MsG0380016710.01.T01:CDS |
| ACCTTCCCAAATTCATCAGC+TGG | 0.476038 | 3:+86902926 | None:intergenic |
| TCAGATGACATGATCACAAC+AGG | 0.480037 | 3:+86903138 | None:intergenic |
| TCAGCAATCATCTGTGATGA+AGG | 0.481432 | 3:-86903166 | MsG0380016710.01.T01:intron |
| TGTGATGACCAAATTCACTT+TGG | 0.486577 | 3:+86903348 | None:intergenic |
| GAACAGAACACTTTGGAGAA+TGG | 0.490659 | 3:-86903516 | MsG0380016710.01.T01:CDS |
| CAGTGACAACTGCTGAAAAT+GGG | 0.502968 | 3:-86903575 | MsG0380016710.01.T01:CDS |
| TTTACATCAGATTGTTTGAG+AGG | 0.513388 | 3:+86902961 | None:intergenic |
| TGAAAATGGGCTGAAGGCAT+TGG | 0.515465 | 3:-86903562 | MsG0380016710.01.T01:CDS |
| AACTCATAGCCAGTCATCCC+TGG | 0.516855 | 3:+86903313 | None:intergenic |
| AAAAGCAGGTGTATGGAAGA+AGG | 0.535716 | 3:-86903006 | MsG0380016710.01.T01:intron |
| AAAGCAGGTGTATGGAAGAA+GGG | 0.542181 | 3:-86903005 | MsG0380016710.01.T01:intron |
| AACTGCTGAAAATGGGCTGA+AGG | 0.568007 | 3:-86903568 | MsG0380016710.01.T01:CDS |
| CTCAAGAATTCCTCTTGCAA+AGG | 0.589496 | 3:-86903788 | MsG0380016710.01.T01:intron |
| GCCAGCTGATGAATTTGGGA+AGG | 0.598518 | 3:-86902927 | MsG0380016710.01.T01:CDS |
| AAGCAGGTGTATGGAAGAAG+GGG | 0.612241 | 3:-86903004 | MsG0380016710.01.T01:intron |
| TCACAGACTACTGCATGCCA+GGG | 0.612620 | 3:-86903330 | MsG0380016710.01.T01:CDS |
| CTTTGCAAGAGGAATTCTTG+AGG | 0.621330 | 3:+86903789 | None:intergenic |
| TCTGATGTAAAACAACTGAC+AGG | 0.621647 | 3:-86902949 | MsG0380016710.01.T01:CDS |
| TCATCAACAGCAAGAACATG+AGG | 0.625979 | 3:+86903845 | None:intergenic |
| AAGTGGTGAACAGAACACTT+TGG | 0.626039 | 3:-86903523 | MsG0380016710.01.T01:CDS |
| GAGTATTTGGGCTTGTCAAG+TGG | 0.627865 | 3:-86903540 | MsG0380016710.01.T01:CDS |
| GGTGTACGTACCTTTGCAAG+AGG | 0.636893 | 3:+86903778 | None:intergenic |
| GCAATCATCTGTGATGAAGG+AGG | 0.667691 | 3:-86903163 | MsG0380016710.01.T01:CDS |
| CATCTGAGAATATACCAACA+AGG | 0.683899 | 3:-86903122 | MsG0380016710.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGAATATAACAGAAAA+TGG | + | Chr3:86903070-86903089 | None:intergenic | 15.0% |
| !! | AGAAAAAGATACAAAAAAAA+TGG | + | Chr3:86903749-86903768 | None:intergenic | 15.0% |
| !! | CTGAAAATAATATCCAATTT+GGG | + | Chr3:86903626-86903645 | None:intergenic | 20.0% |
| !! | TGAAAATAATATCCAATTTG+GGG | + | Chr3:86903625-86903644 | None:intergenic | 20.0% |
| !!! | TGATGTTTGATGTTTTTTTT+TGG | - | Chr3:86903157-86903176 | MsG0380016710.01.T01:CDS | 20.0% |
| !!! | TTTTTTTTTGGTCCATATTT+TGG | - | Chr3:86903169-86903188 | MsG0380016710.01.T01:intron | 20.0% |
| ! | GCTGAAAATAATATCCAATT+TGG | + | Chr3:86903627-86903646 | None:intergenic | 25.0% |
| ! | TGAGTTGCTTAAGAAAATTA+AGG | - | Chr3:86903512-86903531 | MsG0380016710.01.T01:intron | 25.0% |
| !!! | GTGTTTTGTTAGTAACATTT+TGG | + | Chr3:86903350-86903369 | None:intergenic | 25.0% |
| AAATAATATCCAATTTGGGG+TGG | + | Chr3:86903622-86903641 | None:intergenic | 30.0% | |
| CAAACAGAATCACCAAAATA+TGG | + | Chr3:86903184-86903203 | None:intergenic | 30.0% | |
| GTGATTCTGTTTGATTGAAT+GGG | - | Chr3:86903191-86903210 | MsG0380016710.01.T01:intron | 30.0% | |
| TGATTCTTCTTCTTCAAAGT+GGG | - | Chr3:86902920-86902939 | MsG0380016710.01.T01:CDS | 30.0% | |
| TTTACATCAGATTGTTTGAG+AGG | + | Chr3:86903850-86903869 | None:intergenic | 30.0% | |
| ! | AATTACTTGTTGATCCTTGT+TGG | + | Chr3:86903703-86903722 | None:intergenic | 30.0% |
| !!! | GACTATTTCTGGTTTTTGTA+GGG | - | Chr3:86903435-86903454 | MsG0380016710.01.T01:intron | 30.0% |
| !!! | TGACTATTTCTGGTTTTTGT+AGG | - | Chr3:86903434-86903453 | MsG0380016710.01.T01:intron | 30.0% |
| AAAAATGGCATTGTTAGTGC+TGG | + | Chr3:86903734-86903753 | None:intergenic | 35.0% | |
| AAAATGGTTGAGTGAGAGAT+AGG | + | Chr3:86903054-86903073 | None:intergenic | 35.0% | |
| CATCTGAGAATATACCAACA+AGG | - | Chr3:86903686-86903705 | MsG0380016710.01.T01:intron | 35.0% | |
| CTGATTCTTCTTCTTCAAAG+TGG | - | Chr3:86902919-86902938 | MsG0380016710.01.T01:CDS | 35.0% | |
| GGTGATTCTGTTTGATTGAA+TGG | - | Chr3:86903190-86903209 | MsG0380016710.01.T01:intron | 35.0% | |
| GTGATGACCAAATTCACTTT+GGG | + | Chr3:86903462-86903481 | None:intergenic | 35.0% | |
| TCTGATGTAAAACAACTGAC+AGG | - | Chr3:86903859-86903878 | MsG0380016710.01.T01:CDS | 35.0% | |
| TGCTAACAAGTGACTATTTC+TGG | - | Chr3:86903424-86903443 | MsG0380016710.01.T01:intron | 35.0% | |
| TGTGATGACCAAATTCACTT+TGG | + | Chr3:86903463-86903482 | None:intergenic | 35.0% | |
| !! | TGATTGAATGGGCTTTTTGT+TGG | - | Chr3:86903202-86903221 | MsG0380016710.01.T01:intron | 35.0% |
| AAAAGCAGGTGTATGGAAGA+AGG | - | Chr3:86903802-86903821 | MsG0380016710.01.T01:CDS | 40.0% | |
| AAAGCAGGTGTATGGAAGAA+GGG | - | Chr3:86903803-86903822 | MsG0380016710.01.T01:CDS | 40.0% | |
| AAGTGGTGAACAGAACACTT+TGG | - | Chr3:86903285-86903304 | MsG0380016710.01.T01:intron | 40.0% | |
| ACAGTGACAACTGCTGAAAA+TGG | - | Chr3:86903232-86903251 | MsG0380016710.01.T01:intron | 40.0% | |
| CAGCACAACAATGATTGAGT+AGG | + | Chr3:86903781-86903800 | None:intergenic | 40.0% | |
| CAGTGACAACTGCTGAAAAT+GGG | - | Chr3:86903233-86903252 | MsG0380016710.01.T01:intron | 40.0% | |
| CATTGTTGTGCTGAAAAAGC+AGG | - | Chr3:86903788-86903807 | MsG0380016710.01.T01:intron | 40.0% | |
| CTCAAGAATTCCTCTTGCAA+AGG | - | Chr3:86903020-86903039 | MsG0380016710.01.T01:intron | 40.0% | |
| CTTTGCAAGAGGAATTCTTG+AGG | + | Chr3:86903022-86903041 | None:intergenic | 40.0% | |
| TAACACTAACCACCCCAAAT+TGG | - | Chr3:86903610-86903629 | MsG0380016710.01.T01:intron | 40.0% | |
| TCAGATGACATGATCACAAC+AGG | + | Chr3:86903673-86903692 | None:intergenic | 40.0% | |
| TCAGCAATCATCTGTGATGA+AGG | - | Chr3:86903642-86903661 | MsG0380016710.01.T01:intron | 40.0% | |
| TCATCAACAGCAAGAACATG+AGG | + | Chr3:86902966-86902985 | None:intergenic | 40.0% | |
| TTCTTCTTCAAAGTGGGTGA+TGG | - | Chr3:86902926-86902945 | MsG0380016710.01.T01:CDS | 40.0% | |
| ! | GAACAGAACACTTTGGAGAA+TGG | - | Chr3:86903292-86903311 | MsG0380016710.01.T01:intron | 40.0% |
| !! | CTGAAGGCATTGGAGTATTT+GGG | - | Chr3:86903256-86903275 | MsG0380016710.01.T01:intron | 40.0% |
| !! | TCAAAGTGGGTGATGGAAAA+TGG | - | Chr3:86902933-86902952 | MsG0380016710.01.T01:CDS | 40.0% |
| AAGCAGGTGTATGGAAGAAG+GGG | - | Chr3:86903804-86903823 | MsG0380016710.01.T01:CDS | 45.0% | |
| ACAGGCCAGCTGATGAATTT+GGG | - | Chr3:86903877-86903896 | MsG0380016710.01.T01:CDS | 45.0% | |
| ACCTTCCCAAATTCATCAGC+TGG | + | Chr3:86903885-86903904 | None:intergenic | 45.0% | |
| GAGTATTTGGGCTTGTCAAG+TGG | - | Chr3:86903268-86903287 | MsG0380016710.01.T01:intron | 45.0% | |
| GCAATCATCTGTGATGAAGG+AGG | - | Chr3:86903645-86903664 | MsG0380016710.01.T01:intron | 45.0% | |
| GTAGGGACCCAAAGTGAATT+TGG | - | Chr3:86903452-86903471 | MsG0380016710.01.T01:intron | 45.0% | |
| GTGCTGAAAAAGCAGGTGTA+TGG | - | Chr3:86903795-86903814 | MsG0380016710.01.T01:CDS | 45.0% | |
| !! | AACTGCTGAAAATGGGCTGA+AGG | - | Chr3:86903240-86903259 | MsG0380016710.01.T01:intron | 45.0% |
| !! | GCTGAAGGCATTGGAGTATT+TGG | - | Chr3:86903255-86903274 | MsG0380016710.01.T01:intron | 45.0% |
| !! | TGAAAATGGGCTGAAGGCAT+TGG | - | Chr3:86903246-86903265 | MsG0380016710.01.T01:intron | 45.0% |
| AACTCATAGCCAGTCATCCC+TGG | + | Chr3:86903498-86903517 | None:intergenic | 50.0% | |
| ATCACAGACTACTGCATGCC+AGG | - | Chr3:86903477-86903496 | MsG0380016710.01.T01:intron | 50.0% | |
| GACAGGCCAGCTGATGAATT+TGG | - | Chr3:86903876-86903895 | MsG0380016710.01.T01:CDS | 50.0% | |
| GCCAGCTGATGAATTTGGGA+AGG | - | Chr3:86903881-86903900 | MsG0380016710.01.T01:CDS | 50.0% | |
| GGTGTACGTACCTTTGCAAG+AGG | + | Chr3:86903033-86903052 | None:intergenic | 50.0% | |
| TCACAGACTACTGCATGCCA+GGG | - | Chr3:86903478-86903497 | MsG0380016710.01.T01:intron | 50.0% | |
| TACTGCATGCCAGGGATGAC+TGG | - | Chr3:86903486-86903505 | MsG0380016710.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 86902912 | 86903918 | 86902912 | ID=MsG0380016710.01;Name=MsG0380016710.01 |
| Chr3 | mRNA | 86902912 | 86903918 | 86902912 | ID=MsG0380016710.01.T01;Parent=MsG0380016710.01;Name=MsG0380016710.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0|0|1|1|1|5|0|155 |
| Chr3 | exon | 86903789 | 86903918 | 86903789 | ID=MsG0380016710.01.T01:exon:22402;Parent=MsG0380016710.01.T01 |
| Chr3 | exon | 86903515 | 86903594 | 86903515 | ID=MsG0380016710.01.T01:exon:22401;Parent=MsG0380016710.01.T01 |
| Chr3 | exon | 86903297 | 86903374 | 86903297 | ID=MsG0380016710.01.T01:exon:22400;Parent=MsG0380016710.01.T01 |
| Chr3 | exon | 86903114 | 86903184 | 86903114 | ID=MsG0380016710.01.T01:exon:22399;Parent=MsG0380016710.01.T01 |
| Chr3 | exon | 86902912 | 86903020 | 86902912 | ID=MsG0380016710.01.T01:exon:22398;Parent=MsG0380016710.01.T01 |
| Chr3 | CDS | 86903789 | 86903918 | 86903789 | ID=MsG0380016710.01.T01:cds;Parent=MsG0380016710.01.T01 |
| Chr3 | CDS | 86903515 | 86903594 | 86903515 | ID=MsG0380016710.01.T01:cds;Parent=MsG0380016710.01.T01 |
| Chr3 | CDS | 86903297 | 86903374 | 86903297 | ID=MsG0380016710.01.T01:cds;Parent=MsG0380016710.01.T01 |
| Chr3 | CDS | 86903114 | 86903184 | 86903114 | ID=MsG0380016710.01.T01:cds;Parent=MsG0380016710.01.T01 |
| Chr3 | CDS | 86902912 | 86903020 | 86902912 | ID=MsG0380016710.01.T01:cds;Parent=MsG0380016710.01.T01 |
| Gene Sequence |
| Protein sequence |
