Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016712.01.T01 | XP_039688319.1 | 79.255 | 564 | 85 | 3 | 1 | 532 | 1 | 564 | 0 | 877 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016712.01.T01 | Q7XJK5 | 33.813 | 139 | 84 | 1 | 7 | 137 | 2 | 140 | 1.97E-19 | 92.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016712.01.T01 | A0A072V0I7 | 79.255 | 564 | 85 | 3 | 1 | 532 | 1 | 564 | 0.0 | 877 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780041205.01 | MsG0380016712.01 | PPI |
| MsG0380016712.01 | MsG0780041205.01 | PPI |
| MsG0780041205.01 | MsG0380016712.01 | PPI |
| MsG0780036914.01 | MsG0380016712.01 | PPI |
| MsG0880044714.01 | MsG0380016712.01 | PPI |
| MsG0780041205.01 | MsG0380016712.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016712.01.T01 | MTR_3g093900 | 79.255 | 564 | 85 | 3 | 1 | 532 | 1 | 564 | 0.0 | 877 |
| MsG0380016712.01.T01 | MTR_7g106510 | 47.925 | 482 | 182 | 9 | 1 | 422 | 1 | 473 | 2.24e-116 | 353 |
| MsG0380016712.01.T01 | MTR_4g019670 | 44.580 | 572 | 218 | 11 | 1 | 532 | 1 | 513 | 1.23e-113 | 347 |
| MsG0380016712.01.T01 | MTR_8g467500 | 46.350 | 274 | 114 | 3 | 13 | 257 | 13 | 282 | 4.99e-60 | 200 |
| MsG0380016712.01.T01 | MTR_5g075380 | 32.258 | 155 | 105 | 0 | 7 | 161 | 4 | 158 | 4.24e-23 | 96.3 |
| MsG0380016712.01.T01 | MTR_8g036130 | 34.810 | 158 | 98 | 3 | 4 | 157 | 1 | 157 | 5.47e-21 | 92.8 |
| MsG0380016712.01.T01 | MTR_4g032620 | 32.450 | 151 | 101 | 1 | 6 | 155 | 3 | 153 | 1.45e-20 | 91.3 |
| MsG0380016712.01.T01 | MTR_2g016210 | 30.323 | 155 | 107 | 1 | 7 | 160 | 4 | 158 | 1.31e-19 | 88.6 |
| MsG0380016712.01.T01 | MTR_4g031910 | 32.692 | 156 | 104 | 1 | 6 | 160 | 3 | 158 | 3.51e-19 | 87.0 |
| MsG0380016712.01.T01 | MTR_3g466980 | 28.289 | 152 | 109 | 0 | 6 | 157 | 3 | 154 | 2.88e-18 | 84.3 |
| MsG0380016712.01.T01 | MTR_3g466890 | 32.414 | 145 | 98 | 0 | 6 | 150 | 2 | 146 | 1.29e-17 | 80.5 |
| MsG0380016712.01.T01 | MTR_3g065100 | 28.846 | 156 | 111 | 0 | 6 | 161 | 3 | 158 | 2.51e-17 | 82.0 |
| MsG0380016712.01.T01 | MTR_2g035610 | 33.333 | 120 | 80 | 0 | 6 | 125 | 3 | 122 | 2.78e-17 | 78.6 |
| MsG0380016712.01.T01 | MTR_3g466830 | 28.662 | 157 | 112 | 0 | 6 | 162 | 2 | 158 | 5.09e-17 | 79.0 |
| MsG0380016712.01.T01 | MTR_4g032290 | 31.967 | 122 | 82 | 1 | 37 | 157 | 34 | 155 | 5.97e-16 | 77.8 |
| MsG0380016712.01.T01 | MTR_1g090697 | 29.677 | 155 | 108 | 1 | 6 | 160 | 3 | 156 | 7.90e-15 | 72.4 |
| MsG0380016712.01.T01 | MTR_4g032260 | 36.458 | 96 | 61 | 0 | 37 | 132 | 34 | 129 | 1.30e-14 | 72.0 |
| MsG0380016712.01.T01 | MTR_1g090783 | 26.897 | 145 | 105 | 1 | 6 | 150 | 2 | 145 | 1.55e-14 | 71.6 |
| MsG0380016712.01.T01 | MTR_1g090710 | 28.289 | 152 | 98 | 2 | 6 | 157 | 3 | 143 | 9.44e-14 | 69.3 |
| MsG0380016712.01.T01 | MTR_3g466900 | 29.365 | 126 | 89 | 0 | 35 | 160 | 2 | 127 | 2.18e-13 | 67.8 |
| MsG0380016712.01.T01 | MTR_3g031100 | 25.000 | 156 | 110 | 2 | 6 | 157 | 3 | 155 | 3.26e-13 | 70.1 |
| MsG0380016712.01.T01 | MTR_4g028800 | 40.000 | 70 | 40 | 1 | 7 | 76 | 4 | 71 | 6.56e-13 | 64.3 |
| MsG0380016712.01.T01 | MTR_3g466930 | 28.571 | 126 | 90 | 0 | 35 | 160 | 2 | 127 | 1.72e-12 | 65.1 |
| MsG0380016712.01.T01 | MTR_4g063790 | 31.313 | 99 | 68 | 0 | 8 | 106 | 5 | 103 | 2.80e-12 | 65.5 |
| MsG0380016712.01.T01 | MTR_5g047580 | 29.703 | 101 | 70 | 1 | 6 | 106 | 3 | 102 | 1.93e-11 | 62.8 |
| MsG0380016712.01.T01 | MTR_7g055800 | 31.250 | 96 | 51 | 2 | 18 | 113 | 2 | 82 | 5.39e-11 | 59.7 |
| MsG0380016712.01.T01 | MTR_3g031240 | 22.876 | 153 | 117 | 1 | 6 | 157 | 3 | 155 | 6.92e-11 | 62.0 |
| MsG0380016712.01.T01 | MTR_1g077390 | 28.244 | 131 | 93 | 1 | 6 | 136 | 3 | 132 | 9.91e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016712.01.T01 | AT5G27960 | 33.813 | 139 | 84 | 1 | 7 | 137 | 2 | 140 | 2.01e-20 | 92.8 |
| MsG0380016712.01.T01 | AT5G26650 | 32.374 | 139 | 86 | 1 | 7 | 137 | 2 | 140 | 3.49e-20 | 92.8 |
| MsG0380016712.01.T01 | AT1G65300 | 32.258 | 155 | 96 | 2 | 6 | 152 | 2 | 155 | 1.08e-19 | 89.7 |
| MsG0380016712.01.T01 | AT2G40210 | 29.825 | 171 | 117 | 2 | 4 | 174 | 1 | 168 | 6.22e-18 | 86.3 |
| MsG0380016712.01.T01 | AT3G05860 | 27.703 | 148 | 105 | 2 | 4 | 150 | 1 | 147 | 3.71e-15 | 75.9 |
| MsG0380016712.01.T01 | AT3G05860 | 27.703 | 148 | 105 | 2 | 4 | 150 | 1 | 147 | 4.71e-15 | 75.9 |
| MsG0380016712.01.T01 | AT1G31630 | 34.146 | 123 | 79 | 2 | 6 | 128 | 2 | 122 | 9.03e-15 | 76.3 |
| MsG0380016712.01.T01 | AT5G48670 | 29.677 | 155 | 107 | 2 | 6 | 159 | 3 | 156 | 1.31e-14 | 75.5 |
| MsG0380016712.01.T01 | AT3G05860 | 31.667 | 120 | 80 | 2 | 6 | 124 | 3 | 121 | 1.50e-14 | 73.2 |
| MsG0380016712.01.T01 | AT1G65330 | 27.742 | 155 | 103 | 2 | 8 | 154 | 4 | 157 | 4.93e-14 | 73.2 |
| MsG0380016712.01.T01 | AT2G15660 | 30.657 | 137 | 86 | 3 | 41 | 174 | 31 | 161 | 5.77e-14 | 72.4 |
| MsG0380016712.01.T01 | AT2G28700 | 33.594 | 128 | 71 | 3 | 4 | 124 | 1 | 121 | 7.82e-14 | 73.2 |
| MsG0380016712.01.T01 | AT1G22590 | 25.316 | 158 | 109 | 3 | 6 | 160 | 3 | 154 | 4.45e-12 | 64.7 |
| MsG0380016712.01.T01 | AT5G06500 | 26.667 | 150 | 109 | 1 | 6 | 155 | 3 | 151 | 2.14e-11 | 64.7 |
| MsG0380016712.01.T01 | AT5G27810 | 29.670 | 91 | 64 | 0 | 34 | 124 | 3 | 93 | 5.37e-11 | 60.5 |
Find 93 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCCTCCTCAAGGCGATTT+TGG | 0.215144 | 3:+86932461 | MsG0380016712.01.T01:CDS |
| ATACCGCCACACACATATTT+TGG | 0.262443 | 3:+86932239 | MsG0380016712.01.T01:CDS |
| TTCGTTATATTTGTTGATCT+TGG | 0.266394 | 3:-86931865 | None:intergenic |
| TGACCTATTGTTTCGACATT+AGG | 0.272251 | 3:-86932779 | None:intergenic |
| GAAAGGATTGTTCACTAAAA+TGG | 0.281180 | 3:+86931635 | MsG0380016712.01.T01:CDS |
| CTGACTTATGTGGAGGAAAA+AGG | 0.299572 | 3:+86931819 | MsG0380016712.01.T01:CDS |
| AATGGAAGCAACTTCAATTA+AGG | 0.312514 | 3:+86933130 | MsG0380016712.01.T01:CDS |
| GTTATTCCCTAGAGGAAATT+CGG | 0.319248 | 3:+86932364 | MsG0380016712.01.T01:CDS |
| CAATGACAATATGGTAGATT+TGG | 0.340771 | 3:+86932094 | MsG0380016712.01.T01:CDS |
| ATTCCTAATGTCGAAACAAT+AGG | 0.349451 | 3:+86932776 | MsG0380016712.01.T01:CDS |
| AGAGAGGGAGGTTTATTAAG+AGG | 0.383910 | 3:-86932044 | None:intergenic |
| TGCTTTAGACAATGACAATA+TGG | 0.384922 | 3:+86932085 | MsG0380016712.01.T01:CDS |
| TTCGTAGCCAAAACAACATT+GGG | 0.385715 | 3:+86933050 | MsG0380016712.01.T01:CDS |
| TTATTCCCTAGAGGAAATTC+GGG | 0.398930 | 3:+86932365 | MsG0380016712.01.T01:CDS |
| TAACAACACAGATAGCAAAA+TGG | 0.410915 | 3:+86932823 | MsG0380016712.01.T01:CDS |
| ACAATAGGTCAAGTAAGCTT+TGG | 0.426113 | 3:+86932791 | MsG0380016712.01.T01:CDS |
| CAACGCATCAACATCACTAC+TGG | 0.426637 | 3:-86932639 | None:intergenic |
| GGAGGTCAATGCAACTTTGA+AGG | 0.427024 | 3:+86932680 | MsG0380016712.01.T01:CDS |
| TTGATGCTTTGCTTCCTCAA+TGG | 0.441644 | 3:+86932879 | MsG0380016712.01.T01:CDS |
| TTCGTTTAAAATTTGATGCA+TGG | 0.443888 | 3:-86931907 | None:intergenic |
| ACTCATTTGATCAGCTTGCT+TGG | 0.447445 | 3:-86932117 | None:intergenic |
| CTTCCTCAATGGAATTTCAC+AGG | 0.455585 | 3:+86932890 | MsG0380016712.01.T01:CDS |
| CTCCATGTTGCTACCTAGAT+AGG | 0.463692 | 3:-86932399 | None:intergenic |
| ATAGGTCAAGTAAGCTTTGG+AGG | 0.477721 | 3:+86932794 | MsG0380016712.01.T01:CDS |
| TTTCATCAAGGCAATGTTGA+AGG | 0.479948 | 3:+86932986 | MsG0380016712.01.T01:CDS |
| TTTCTTGATTGTACTGACTC+TGG | 0.484517 | 3:-86931783 | None:intergenic |
| ACAGGTTCTGATAACAATGT+AGG | 0.484981 | 3:+86932908 | MsG0380016712.01.T01:CDS |
| TAAAAGTCATGGTTGAGATC+AGG | 0.485469 | 3:+86931544 | None:intergenic |
| GTTGATTTGTTATTTCATCA+AGG | 0.487404 | 3:+86932974 | MsG0380016712.01.T01:CDS |
| TTTCCTCCACATAAGTCAGT+TGG | 0.504777 | 3:-86931815 | None:intergenic |
| ATAGAGATGGTGATAATATG+AGG | 0.515278 | 3:+86933026 | MsG0380016712.01.T01:CDS |
| AACATGTCAACACCGCCACT+TGG | 0.520464 | 3:-86932752 | None:intergenic |
| TGACGGTGTTGGTGCTATGT+TGG | 0.535172 | 3:+86932163 | MsG0380016712.01.T01:CDS |
| GACATCGGCAGTGGCAGAGA+GGG | 0.542637 | 3:-86932059 | None:intergenic |
| TCATGGTTGAGATCAGGAAA+AGG | 0.542864 | 3:+86931550 | None:intergenic |
| GTAGCGAATCTTTCTTTGAG+TGG | 0.550195 | 3:-86931601 | None:intergenic |
| CGCTACGTGAACAGAGTGAA+AGG | 0.557937 | 3:+86931618 | MsG0380016712.01.T01:CDS |
| ATTGTTCACTAAAATGGAGC+AGG | 0.561588 | 3:+86931641 | MsG0380016712.01.T01:CDS |
| AATCTTGATGAATATGGCAT+GGG | 0.562864 | 3:+86933076 | MsG0380016712.01.T01:CDS |
| ATTCGTAGCCAAAACAACAT+TGG | 0.568395 | 3:+86933049 | MsG0380016712.01.T01:CDS |
| CCTAGTGGTGGTGACGGTGT+TGG | 0.572728 | 3:+86932152 | MsG0380016712.01.T01:CDS |
| AAATCTTGATGAATATGGCA+TGG | 0.578232 | 3:+86933075 | MsG0380016712.01.T01:CDS |
| ATTGTCAACAGAGTTTGCAT+TGG | 0.580353 | 3:-86933104 | None:intergenic |
| AACTCTGTTGACAATAACAA+TGG | 0.580414 | 3:+86933112 | MsG0380016712.01.T01:CDS |
| CCAACACCGTCACCACCACT+AGG | 0.583076 | 3:-86932152 | None:intergenic |
| TCACCTCATGCAAATCATAG+TGG | 0.589731 | 3:+86932851 | MsG0380016712.01.T01:CDS |
| AAAGCACATGACATCGGCAG+TGG | 0.598200 | 3:-86932068 | None:intergenic |
| ATCGGCAGTGGCAGAGAGGG+AGG | 0.599362 | 3:-86932056 | None:intergenic |
| GACGGACCAACTGACTTATG+TGG | 0.599548 | 3:+86931809 | MsG0380016712.01.T01:CDS |
| AAAATATTGGAAGCAACATG+TGG | 0.603782 | 3:+86932597 | MsG0380016712.01.T01:CDS |
| GTAGATAACATGCCTCCTCA+AGG | 0.611282 | 3:+86932452 | MsG0380016712.01.T01:CDS |
| AGTACAATCAAGAAATATGA+CGG | 0.615154 | 3:+86931791 | MsG0380016712.01.T01:CDS |
| CAAGCTGATCAAATGAGTGA+TGG | 0.615984 | 3:+86932122 | MsG0380016712.01.T01:CDS |
| ACATTACATATCGCAACATG+TGG | 0.617634 | 3:+86932711 | MsG0380016712.01.T01:CDS |
| CACATGCTTCAATACCACAC+AGG | 0.617665 | 3:-86931671 | None:intergenic |
| GACATGGAGGTATCACTGCA+TGG | 0.617708 | 3:+86932935 | MsG0380016712.01.T01:CDS |
| TCATGAGATGGCCACACTGA+GGG | 0.621251 | 3:-86931723 | None:intergenic |
| TAACAATATTTACAGCAACA+TGG | 0.622242 | 3:+86932214 | MsG0380016712.01.T01:CDS |
| TAACAATGTAGGCAACGACA+TGG | 0.622250 | 3:+86932919 | MsG0380016712.01.T01:CDS |
| TTTAATCCTAGTGGTGGTGA+CGG | 0.628750 | 3:+86932146 | MsG0380016712.01.T01:CDS |
| CCTCCAAAATCGCCTTGAGG+AGG | 0.629694 | 3:-86932464 | None:intergenic |
| GATGATATGTTATTCCCTAG+AGG | 0.633514 | 3:+86932356 | MsG0380016712.01.T01:CDS |
| CCTCATGCAAATCATAGTGG+TGG | 0.635594 | 3:+86932854 | MsG0380016712.01.T01:CDS |
| GAACCTGTGAAATTCCATTG+AGG | 0.637565 | 3:-86932893 | None:intergenic |
| TATATTTGTTGATCTTGGCG+AGG | 0.643058 | 3:-86931860 | None:intergenic |
| ACTGAGGGTCTTGAACCACC+TGG | 0.643320 | 3:-86931708 | None:intergenic |
| AACGCATCAACATCACTACT+GGG | 0.649454 | 3:-86932638 | None:intergenic |
| ACATGCTTCAATACCACACA+GGG | 0.652435 | 3:-86931670 | None:intergenic |
| AGTGTGGCCATCTCATGATG+TGG | 0.654651 | 3:+86931728 | MsG0380016712.01.T01:CDS |
| TTGTCTAAAGCACATGACAT+CGG | 0.658558 | 3:-86932074 | None:intergenic |
| TTCCCTAGAGGAAATTCGGG+GGG | 0.658559 | 3:+86932368 | MsG0380016712.01.T01:CDS |
| CGTAGCCAAAACAACATTGG+GGG | 0.666330 | 3:+86933052 | MsG0380016712.01.T01:CDS |
| CCACCACCAAAATATGTGTG+TGG | 0.667305 | 3:-86932245 | None:intergenic |
| ATCTTGATGAATATGGCATG+GGG | 0.670439 | 3:+86933077 | MsG0380016712.01.T01:CDS |
| AAACCTCCAAAATCGCCTTG+AGG | 0.673422 | 3:-86932467 | None:intergenic |
| CCACCAAAATATGTGTGTGG+CGG | 0.676512 | 3:-86932242 | None:intergenic |
| TGACCTCTAAAACTAAACTG+AGG | 0.679604 | 3:-86932551 | None:intergenic |
| TCGTAGCCAAAACAACATTG+GGG | 0.682214 | 3:+86933051 | MsG0380016712.01.T01:CDS |
| TCACATGAAAATCCAAGTGG+CGG | 0.689481 | 3:+86932740 | MsG0380016712.01.T01:CDS |
| GGACCAACTGACTTATGTGG+AGG | 0.690646 | 3:+86931812 | MsG0380016712.01.T01:CDS |
| CCACCACTATGATTTGCATG+AGG | 0.697525 | 3:-86932854 | None:intergenic |
| TACCTATCTAGGTAGCAACA+TGG | 0.698196 | 3:+86932397 | MsG0380016712.01.T01:CDS |
| TGACATCGGCAGTGGCAGAG+AGG | 0.703505 | 3:-86932060 | None:intergenic |
| ATCATGAGATGGCCACACTG+AGG | 0.712363 | 3:-86931724 | None:intergenic |
| TATTCCCTAGAGGAAATTCG+GGG | 0.717198 | 3:+86932366 | MsG0380016712.01.T01:CDS |
| ACATCAGATAAATATCTCAG+TGG | 0.720514 | 3:+86932326 | MsG0380016712.01.T01:CDS |
| ATTCCCTAGAGGAAATTCGG+GGG | 0.724819 | 3:+86932367 | MsG0380016712.01.T01:CDS |
| GTGGTTCAAGACCCTCAGTG+TGG | 0.726788 | 3:+86931712 | MsG0380016712.01.T01:CDS |
| TCGTCATGACTTACATGCGG+CGG | 0.728724 | 3:-86932425 | None:intergenic |
| ACATCGTCATGACTTACATG+CGG | 0.728985 | 3:-86932428 | None:intergenic |
| CCATCACATGAAAATCCAAG+TGG | 0.734016 | 3:+86932737 | MsG0380016712.01.T01:CDS |
| CAATGTAGGCAACGACATGG+AGG | 0.748862 | 3:+86932922 | MsG0380016712.01.T01:CDS |
| GAGCAGGTGAAAACCCTGTG+TGG | 0.782460 | 3:+86931657 | MsG0380016712.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTGTATTAGTTTTT+TGG | - | Chr3:86931754-86931773 | None:intergenic | 10.0% |
| !!! | GAAAGTTTTGATAAAAATAT+TGG | + | Chr3:86932584-86932603 | MsG0380016712.01.T01:CDS | 15.0% |
| !!! | TTGATTTTTACACAAAATTC+TGG | + | Chr3:86932659-86932678 | MsG0380016712.01.T01:CDS | 20.0% |
| ! | AGTACAATCAAGAAATATGA+CGG | + | Chr3:86931791-86931810 | MsG0380016712.01.T01:CDS | 25.0% |
| ! | AGTATGAAAAACAACTTGAT+TGG | + | Chr3:86931957-86931976 | MsG0380016712.01.T01:CDS | 25.0% |
| ! | GATAACAAAAATCATAGAGA+TGG | + | Chr3:86933013-86933032 | MsG0380016712.01.T01:CDS | 25.0% |
| ! | TAACAATATTTACAGCAACA+TGG | + | Chr3:86932214-86932233 | MsG0380016712.01.T01:CDS | 25.0% |
| !! | ATGCATCAAATTTTAAACGA+AGG | + | Chr3:86931909-86931928 | MsG0380016712.01.T01:CDS | 25.0% |
| !! | ATTTTTACACAAAATTCTGG+AGG | + | Chr3:86932662-86932681 | MsG0380016712.01.T01:CDS | 25.0% |
| !! | GTTAATCAAGAGAATTTTGA+AGG | + | Chr3:86932185-86932204 | MsG0380016712.01.T01:CDS | 25.0% |
| !! | TTCGTTATATTTGTTGATCT+TGG | - | Chr3:86931868-86931887 | None:intergenic | 25.0% |
| !! | TTCGTTTAAAATTTGATGCA+TGG | - | Chr3:86931910-86931929 | None:intergenic | 25.0% |
| !!! | GTTGATTTGTTATTTCATCA+AGG | + | Chr3:86932974-86932993 | MsG0380016712.01.T01:CDS | 25.0% |
| AAAATATTGGAAGCAACATG+TGG | + | Chr3:86932597-86932616 | MsG0380016712.01.T01:CDS | 30.0% | |
| AAATCTTGATGAATATGGCA+TGG | + | Chr3:86933075-86933094 | MsG0380016712.01.T01:CDS | 30.0% | |
| AACTCTGTTGACAATAACAA+TGG | + | Chr3:86933112-86933131 | MsG0380016712.01.T01:CDS | 30.0% | |
| AATCTTGATGAATATGGCAT+GGG | + | Chr3:86933076-86933095 | MsG0380016712.01.T01:CDS | 30.0% | |
| ACATCAGATAAATATCTCAG+TGG | + | Chr3:86932326-86932345 | MsG0380016712.01.T01:CDS | 30.0% | |
| ATAGAGATGGTGATAATATG+AGG | + | Chr3:86933026-86933045 | MsG0380016712.01.T01:CDS | 30.0% | |
| ATTCCTAATGTCGAAACAAT+AGG | + | Chr3:86932776-86932795 | MsG0380016712.01.T01:CDS | 30.0% | |
| CAATGACAATATGGTAGATT+TGG | + | Chr3:86932094-86932113 | MsG0380016712.01.T01:CDS | 30.0% | |
| GAAAGGATTGTTCACTAAAA+TGG | + | Chr3:86931635-86931654 | MsG0380016712.01.T01:CDS | 30.0% | |
| TAACAACACAGATAGCAAAA+TGG | + | Chr3:86932823-86932842 | MsG0380016712.01.T01:CDS | 30.0% | |
| ! | CACTGCCTTTTCAAAATAAT+CGG | - | Chr3:86932021-86932040 | None:intergenic | 30.0% |
| ! | GAGGTTTTTATCATAACATG+TGG | + | Chr3:86932483-86932502 | MsG0380016712.01.T01:CDS | 30.0% |
| ! | TGCTTTAGACAATGACAATA+TGG | + | Chr3:86932085-86932104 | MsG0380016712.01.T01:CDS | 30.0% |
| ! | TTGCTACTAGAATTTTCATG+TGG | - | Chr3:86932515-86932534 | None:intergenic | 30.0% |
| !!! | GAGAACCGATTATTTTGAAA+AGG | + | Chr3:86932013-86932032 | MsG0380016712.01.T01:CDS | 30.0% |
| !!! | TTTCCTCAGTTTAGTTTTAG+AGG | + | Chr3:86932548-86932567 | MsG0380016712.01.T01:CDS | 30.0% |
| ACAATAGGTCAAGTAAGCTT+TGG | + | Chr3:86932791-86932810 | MsG0380016712.01.T01:CDS | 35.0% | |
| ACATTACATATCGCAACATG+TGG | + | Chr3:86932711-86932730 | MsG0380016712.01.T01:CDS | 35.0% | |
| ATCTTGATGAATATGGCATG+GGG | + | Chr3:86933077-86933096 | MsG0380016712.01.T01:CDS | 35.0% | |
| ATTCGTAGCCAAAACAACAT+TGG | + | Chr3:86933049-86933068 | MsG0380016712.01.T01:CDS | 35.0% | |
| ATTGTCAACAGAGTTTGCAT+TGG | - | Chr3:86933107-86933126 | None:intergenic | 35.0% | |
| ATTGTTCACTAAAATGGAGC+AGG | + | Chr3:86931641-86931660 | MsG0380016712.01.T01:CDS | 35.0% | |
| GATGATATGTTATTCCCTAG+AGG | + | Chr3:86932356-86932375 | MsG0380016712.01.T01:CDS | 35.0% | |
| GTTATTCCCTAGAGGAAATT+CGG | + | Chr3:86932364-86932383 | MsG0380016712.01.T01:CDS | 35.0% | |
| TGACCTATTGTTTCGACATT+AGG | - | Chr3:86932782-86932801 | None:intergenic | 35.0% | |
| TTATTCCCTAGAGGAAATTC+GGG | + | Chr3:86932365-86932384 | MsG0380016712.01.T01:CDS | 35.0% | |
| TTCGTAGCCAAAACAACATT+GGG | + | Chr3:86933050-86933069 | MsG0380016712.01.T01:CDS | 35.0% | |
| TTTCATCAAGGCAATGTTGA+AGG | + | Chr3:86932986-86933005 | MsG0380016712.01.T01:CDS | 35.0% | |
| ! | ACAGGTTCTGATAACAATGT+AGG | + | Chr3:86932908-86932927 | MsG0380016712.01.T01:CDS | 35.0% |
| ! | AGTGGCATTTTCAATCAACT+TGG | - | Chr3:86931586-86931605 | None:intergenic | 35.0% |
| ! | CTACTAGAATTTTCATGTGG+TGG | - | Chr3:86932512-86932531 | None:intergenic | 35.0% |
| ! | GGAATTTTCTCAAGGCAATA+TGG | + | Chr3:86932277-86932296 | MsG0380016712.01.T01:CDS | 35.0% |
| ! | GTTGATGTGGAATTTTCTCA+AGG | + | Chr3:86932269-86932288 | MsG0380016712.01.T01:CDS | 35.0% |
| ! | TATATTTGTTGATCTTGGCG+AGG | - | Chr3:86931863-86931882 | None:intergenic | 35.0% |
| ! | TTGTCTAAAGCACATGACAT+CGG | - | Chr3:86932077-86932096 | None:intergenic | 35.0% |
| !! | GGAAGATTTTGATAGTAGCA+TGG | + | Chr3:86932298-86932317 | MsG0380016712.01.T01:CDS | 35.0% |
| !! | TGACCTCTAAAACTAAACTG+AGG | - | Chr3:86932554-86932573 | None:intergenic | 35.0% |
| !! | TTTCTTGATTGTACTGACTC+TGG | - | Chr3:86931786-86931805 | None:intergenic | 35.0% |
| !!! | AGTGATGGTTTTAATCCTAG+TGG | + | Chr3:86932137-86932156 | MsG0380016712.01.T01:CDS | 35.0% |
| !!! | GAAGCATGTGCAGTTTTATT+TGG | + | Chr3:86931684-86931703 | MsG0380016712.01.T01:CDS | 35.0% |
| AACGCATCAACATCACTACT+GGG | - | Chr3:86932641-86932660 | None:intergenic | 40.0% | |
| ACATCGTCATGACTTACATG+CGG | - | Chr3:86932431-86932450 | None:intergenic | 40.0% | |
| ACATGCTTCAATACCACACA+GGG | - | Chr3:86931673-86931692 | None:intergenic | 40.0% | |
| AGAGAGGGAGGTTTATTAAG+AGG | - | Chr3:86932047-86932066 | None:intergenic | 40.0% | |
| CAAGCTGATCAAATGAGTGA+TGG | + | Chr3:86932122-86932141 | MsG0380016712.01.T01:CDS | 40.0% | |
| CCATCACATGAAAATCCAAG+TGG | + | Chr3:86932737-86932756 | MsG0380016712.01.T01:CDS | 40.0% | |
| CTGACTTATGTGGAGGAAAA+AGG | + | Chr3:86931819-86931838 | MsG0380016712.01.T01:CDS | 40.0% | |
| CTTCCTCAATGGAATTTCAC+AGG | + | Chr3:86932890-86932909 | MsG0380016712.01.T01:CDS | 40.0% | |
| GAACCTGTGAAATTCCATTG+AGG | - | Chr3:86932896-86932915 | None:intergenic | 40.0% | |
| GGGGGAAATCTTGATGAATA+TGG | + | Chr3:86933070-86933089 | MsG0380016712.01.T01:CDS | 40.0% | |
| GTAGCGAATCTTTCTTTGAG+TGG | - | Chr3:86931604-86931623 | None:intergenic | 40.0% | |
| TAACAATGTAGGCAACGACA+TGG | + | Chr3:86932919-86932938 | MsG0380016712.01.T01:CDS | 40.0% | |
| TACCTATCTAGGTAGCAACA+TGG | + | Chr3:86932397-86932416 | MsG0380016712.01.T01:CDS | 40.0% | |
| TATTCCCTAGAGGAAATTCG+GGG | + | Chr3:86932366-86932385 | MsG0380016712.01.T01:CDS | 40.0% | |
| TCACATGAAAATCCAAGTGG+CGG | + | Chr3:86932740-86932759 | MsG0380016712.01.T01:CDS | 40.0% | |
| TCACCTCATGCAAATCATAG+TGG | + | Chr3:86932851-86932870 | MsG0380016712.01.T01:CDS | 40.0% | |
| TCGTAGCCAAAACAACATTG+GGG | + | Chr3:86933051-86933070 | MsG0380016712.01.T01:CDS | 40.0% | |
| TTGATGCTTTGCTTCCTCAA+TGG | + | Chr3:86932879-86932898 | MsG0380016712.01.T01:CDS | 40.0% | |
| TTTCCTCCACATAAGTCAGT+TGG | - | Chr3:86931818-86931837 | None:intergenic | 40.0% | |
| ! | ACTCATTTGATCAGCTTGCT+TGG | - | Chr3:86932120-86932139 | None:intergenic | 40.0% |
| ! | ATACCGCCACACACATATTT+TGG | + | Chr3:86932239-86932258 | MsG0380016712.01.T01:CDS | 40.0% |
| ! | ATAGGTCAAGTAAGCTTTGG+AGG | + | Chr3:86932794-86932813 | MsG0380016712.01.T01:CDS | 40.0% |
| ! | CCACTTGGATTTTCATGTGA+TGG | - | Chr3:86932740-86932759 | None:intergenic | 40.0% |
| ! | CTACTGGGATTTTCATGTGA+TGG | - | Chr3:86932626-86932645 | None:intergenic | 40.0% |
| ! | TTTAATCCTAGTGGTGGTGA+CGG | + | Chr3:86932146-86932165 | MsG0380016712.01.T01:CDS | 40.0% |
| !! | GATTTCCCCCAATGTTGTTT+TGG | - | Chr3:86933060-86933079 | None:intergenic | 40.0% |
| !! | TTTTTGGCCACATCATGAGA+TGG | - | Chr3:86931738-86931757 | None:intergenic | 40.0% |
| !!! | GATGGTTTTAATCCTAGTGG+TGG | + | Chr3:86932140-86932159 | MsG0380016712.01.T01:CDS | 40.0% |
| !!! | TGTGCAGTTTTATTTGGTCC+AGG | + | Chr3:86931690-86931709 | MsG0380016712.01.T01:CDS | 40.0% |
| AAACCTCCAAAATCGCCTTG+AGG | - | Chr3:86932470-86932489 | None:intergenic | 45.0% | |
| ATTCCCTAGAGGAAATTCGG+GGG | + | Chr3:86932367-86932386 | MsG0380016712.01.T01:CDS | 45.0% | |
| CAACGCATCAACATCACTAC+TGG | - | Chr3:86932642-86932661 | None:intergenic | 45.0% | |
| CACATGCTTCAATACCACAC+AGG | - | Chr3:86931674-86931693 | None:intergenic | 45.0% | |
| CCACCAAAATATGTGTGTGG+CGG | - | Chr3:86932245-86932264 | None:intergenic | 45.0% | |
| CCACCACCAAAATATGTGTG+TGG | - | Chr3:86932248-86932267 | None:intergenic | 45.0% | |
| CCTCATGCAAATCATAGTGG+TGG | + | Chr3:86932854-86932873 | MsG0380016712.01.T01:CDS | 45.0% | |
| CGTAGCCAAAACAACATTGG+GGG | + | Chr3:86933052-86933071 | MsG0380016712.01.T01:CDS | 45.0% | |
| CTCCATGTTGCTACCTAGAT+AGG | - | Chr3:86932402-86932421 | None:intergenic | 45.0% | |
| GGAGGTCAATGCAACTTTGA+AGG | + | Chr3:86932680-86932699 | MsG0380016712.01.T01:CDS | 45.0% | |
| GTAGATAACATGCCTCCTCA+AGG | + | Chr3:86932452-86932471 | MsG0380016712.01.T01:CDS | 45.0% | |
| ! | CCACCACTATGATTTGCATG+AGG | - | Chr3:86932857-86932876 | None:intergenic | 45.0% |
| ! | GGGGGTTCTAATACCTATCT+AGG | + | Chr3:86932386-86932405 | MsG0380016712.01.T01:CDS | 45.0% |
| !!! | CCACACACATATTTTGGTGG+TGG | + | Chr3:86932245-86932264 | MsG0380016712.01.T01:CDS | 45.0% |
| !!! | GCAGTTTTATTTGGTCCAGG+TGG | + | Chr3:86931693-86931712 | MsG0380016712.01.T01:CDS | 45.0% |
| !!! | TTTTGGTGGTGGTGTTGATG+TGG | + | Chr3:86932256-86932275 | MsG0380016712.01.T01:CDS | 45.0% |
| AAAGCACATGACATCGGCAG+TGG | - | Chr3:86932071-86932090 | None:intergenic | 50.0% | |
| AACATGTCAACACCGCCACT+TGG | - | Chr3:86932755-86932774 | None:intergenic | 50.0% | |
| AACCCCCCGAATTTCCTCTA+GGG | - | Chr3:86932373-86932392 | None:intergenic | 50.0% | |
| AGTGTGGCCATCTCATGATG+TGG | + | Chr3:86931728-86931747 | MsG0380016712.01.T01:CDS | 50.0% | |
| ATCATGAGATGGCCACACTG+AGG | - | Chr3:86931727-86931746 | None:intergenic | 50.0% | |
| CAATGTAGGCAACGACATGG+AGG | + | Chr3:86932922-86932941 | MsG0380016712.01.T01:CDS | 50.0% | |
| CGCTACGTGAACAGAGTGAA+AGG | + | Chr3:86931618-86931637 | MsG0380016712.01.T01:CDS | 50.0% | |
| TCATGAGATGGCCACACTGA+GGG | - | Chr3:86931726-86931745 | None:intergenic | 50.0% | |
| TCGTCATGACTTACATGCGG+CGG | - | Chr3:86932428-86932447 | None:intergenic | 50.0% | |
| TTCCCTAGAGGAAATTCGGG+GGG | + | Chr3:86932368-86932387 | MsG0380016712.01.T01:CDS | 50.0% | |
| ! | ATGCCTCCTCAAGGCGATTT+TGG | + | Chr3:86932461-86932480 | MsG0380016712.01.T01:CDS | 50.0% |
| ! | GACGGACCAACTGACTTATG+TGG | + | Chr3:86931809-86931828 | MsG0380016712.01.T01:CDS | 50.0% |
| ! | GGACCAACTGACTTATGTGG+AGG | + | Chr3:86931812-86931831 | MsG0380016712.01.T01:CDS | 50.0% |
| !! | CCGCCACACACATATTTTGG+TGG | + | Chr3:86932242-86932261 | MsG0380016712.01.T01:CDS | 50.0% |
| !! | GACATGGAGGTATCACTGCA+TGG | + | Chr3:86932935-86932954 | MsG0380016712.01.T01:CDS | 50.0% |
| !! | TGACGGTGTTGGTGCTATGT+TGG | + | Chr3:86932163-86932182 | MsG0380016712.01.T01:CDS | 50.0% |
| ACTGAGGGTCTTGAACCACC+TGG | - | Chr3:86931711-86931730 | None:intergenic | 55.0% | |
| CCTCCAAAATCGCCTTGAGG+AGG | - | Chr3:86932467-86932486 | None:intergenic | 55.0% | |
| GAACCCCCCGAATTTCCTCT+AGG | - | Chr3:86932374-86932393 | None:intergenic | 55.0% | |
| GAGCAGGTGAAAACCCTGTG+TGG | + | Chr3:86931657-86931676 | MsG0380016712.01.T01:CDS | 55.0% | |
| GTGGTTCAAGACCCTCAGTG+TGG | + | Chr3:86931712-86931731 | MsG0380016712.01.T01:CDS | 55.0% | |
| ! | CCTCCTCAAGGCGATTTTGG+AGG | + | Chr3:86932464-86932483 | MsG0380016712.01.T01:CDS | 55.0% |
| CCAACACCGTCACCACCACT+AGG | - | Chr3:86932155-86932174 | None:intergenic | 60.0% | |
| GACATCGGCAGTGGCAGAGA+GGG | - | Chr3:86932062-86932081 | None:intergenic | 60.0% | |
| TGACATCGGCAGTGGCAGAG+AGG | - | Chr3:86932063-86932082 | None:intergenic | 60.0% | |
| !! | CCTAGTGGTGGTGACGGTGT+TGG | + | Chr3:86932152-86932171 | MsG0380016712.01.T01:CDS | 60.0% |
| ATCGGCAGTGGCAGAGAGGG+AGG | - | Chr3:86932059-86932078 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 86931552 | 86933150 | 86931552 | ID=MsG0380016712.01;Name=MsG0380016712.01 |
| Chr3 | mRNA | 86931552 | 86933150 | 86931552 | ID=MsG0380016712.01.T01;Parent=MsG0380016712.01;Name=MsG0380016712.01.T01;_AED=0.00;_eAED=0.10;_QI=0|-1|0|1|-1|1|1|0|532 |
| Chr3 | exon | 86931552 | 86933150 | 86931552 | ID=MsG0380016712.01.T01:exon:22371;Parent=MsG0380016712.01.T01 |
| Chr3 | CDS | 86931552 | 86933150 | 86931552 | ID=MsG0380016712.01.T01:cds;Parent=MsG0380016712.01.T01 |
| Gene Sequence |
| Protein sequence |
