Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041205.01.T03 | XP_013454922.1 | 80.322 | 559 | 63 | 3 | 1 | 552 | 1 | 519 | 0 | 825 |
| MsG0780041205.01.T02 | XP_013450231.1 | 89.216 | 510 | 48 | 2 | 1 | 510 | 1 | 503 | 0 | 878 |
| MsG0780041205.01.T01 | XP_013454922.1 | 89.038 | 520 | 56 | 1 | 1 | 520 | 1 | 519 | 0 | 889 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041205.01.T01 | Q7XJK8 | 29.87 | 231 | 134 | 6 | 6 | 220 | 2 | 220 | 1.11E-19 | 92.4 |
| MsG0780041205.01.T02 | Q7XJK8 | 29.87 | 231 | 134 | 6 | 6 | 220 | 2 | 220 | 1.01E-19 | 92.8 |
| MsG0780041205.01.T03 | Q7XJK8 | 29.87 | 231 | 134 | 6 | 6 | 220 | 2 | 220 | 1.07E-19 | 92.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041205.01.T01 | A0A072USW1 | 89.038 | 520 | 56 | 1 | 1 | 520 | 1 | 519 | 0.0 | 889 |
| MsG0780041205.01.T02 | A0A072U3F6 | 89.216 | 510 | 48 | 2 | 1 | 510 | 1 | 503 | 0.0 | 878 |
| MsG0780041205.01.T03 | A0A072USW1 | 80.322 | 559 | 63 | 3 | 1 | 552 | 1 | 519 | 0.0 | 825 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0780041205.01.T01 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0780040966.01 | MsG0780041205.01 | 0.804416 | 2.183534e-49 | 1.125158e-46 |
| MsG0280007414.01 | MsG0780041205.01 | 0.810068 | 1.385396e-50 | 8.270428e-48 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041205.01.T03 | MTR_4g019670 | 80.322 | 559 | 63 | 3 | 1 | 552 | 1 | 519 | 0.0 | 825 |
| MsG0780041205.01.T03 | MTR_7g106510 | 79.428 | 559 | 52 | 5 | 1 | 552 | 1 | 503 | 0.0 | 815 |
| MsG0780041205.01.T03 | MTR_3g093900 | 47.504 | 581 | 265 | 12 | 1 | 552 | 1 | 570 | 1.80e-151 | 446 |
| MsG0780041205.01.T03 | MTR_8g467500 | 50.538 | 279 | 130 | 2 | 13 | 287 | 13 | 287 | 3.09e-66 | 217 |
| MsG0780041205.01.T03 | MTR_3g466980 | 32.727 | 165 | 107 | 2 | 1 | 164 | 1 | 162 | 1.29e-23 | 99.8 |
| MsG0780041205.01.T03 | MTR_5g075380 | 34.615 | 156 | 100 | 2 | 7 | 161 | 4 | 158 | 2.78e-23 | 97.1 |
| MsG0780041205.01.T03 | MTR_4g032620 | 36.066 | 122 | 78 | 0 | 6 | 127 | 3 | 124 | 3.15e-21 | 93.2 |
| MsG0780041205.01.T03 | MTR_8g036130 | 38.168 | 131 | 79 | 1 | 4 | 132 | 1 | 131 | 3.22e-21 | 93.6 |
| MsG0780041205.01.T03 | MTR_3g466830 | 33.333 | 150 | 99 | 1 | 6 | 154 | 2 | 151 | 4.73e-20 | 87.8 |
| MsG0780041205.01.T03 | MTR_4g031910 | 41.667 | 132 | 74 | 1 | 1 | 132 | 1 | 129 | 2.00e-19 | 87.8 |
| MsG0780041205.01.T03 | MTR_2g016210 | 30.345 | 145 | 100 | 1 | 7 | 150 | 4 | 148 | 6.92e-19 | 86.7 |
| MsG0780041205.01.T03 | MTR_3g065100 | 33.775 | 151 | 99 | 1 | 6 | 155 | 3 | 153 | 4.10e-18 | 84.3 |
| MsG0780041205.01.T03 | MTR_3g466890 | 30.065 | 153 | 106 | 1 | 6 | 157 | 2 | 154 | 9.66e-18 | 81.3 |
| MsG0780041205.01.T03 | MTR_1g090710 | 32.174 | 115 | 77 | 1 | 6 | 120 | 3 | 116 | 1.41e-17 | 80.5 |
| MsG0780041205.01.T03 | MTR_4g032260 | 41.053 | 95 | 56 | 0 | 38 | 132 | 35 | 129 | 2.08e-17 | 80.1 |
| MsG0780041205.01.T03 | MTR_3g031100 | 28.571 | 140 | 99 | 1 | 6 | 144 | 3 | 142 | 1.94e-16 | 79.3 |
| MsG0780041205.01.T03 | MTR_5g047580 | 34.167 | 120 | 75 | 2 | 1 | 120 | 1 | 116 | 1.97e-16 | 77.0 |
| MsG0780041205.01.T03 | MTR_4g032290 | 32.704 | 159 | 80 | 4 | 38 | 175 | 35 | 187 | 2.28e-16 | 79.0 |
| MsG0780041205.01.T03 | MTR_2g035610 | 36.800 | 125 | 76 | 1 | 1 | 125 | 1 | 122 | 2.88e-16 | 75.5 |
| MsG0780041205.01.T03 | MTR_4g063790 | 28.750 | 160 | 103 | 4 | 1 | 155 | 1 | 154 | 1.84e-15 | 74.7 |
| MsG0780041205.01.T03 | MTR_3g031240 | 27.350 | 117 | 85 | 0 | 6 | 122 | 3 | 119 | 1.85e-15 | 75.1 |
| MsG0780041205.01.T03 | MTR_4g028800 | 42.857 | 70 | 38 | 1 | 7 | 76 | 4 | 71 | 2.24e-15 | 71.6 |
| MsG0780041205.01.T03 | MTR_1g090783 | 25.517 | 145 | 107 | 1 | 6 | 150 | 2 | 145 | 3.54e-15 | 73.6 |
| MsG0780041205.01.T03 | MTR_3g466930 | 33.065 | 124 | 82 | 1 | 35 | 157 | 2 | 125 | 3.64e-15 | 72.8 |
| MsG0780041205.01.T03 | MTR_1g090697 | 33.333 | 117 | 73 | 2 | 1 | 115 | 1 | 114 | 7.80e-15 | 72.8 |
| MsG0780041205.01.T03 | MTR_3g466900 | 31.452 | 124 | 84 | 1 | 35 | 157 | 2 | 125 | 1.27e-14 | 71.2 |
| MsG0780041205.01.T03 | MTR_1g077390 | 30.328 | 122 | 83 | 2 | 6 | 126 | 3 | 123 | 1.54e-14 | 71.6 |
| MsG0780041205.01.T03 | MTR_4g028720 | 34.694 | 147 | 92 | 3 | 6 | 149 | 3 | 148 | 1.81e-13 | 68.9 |
| MsG0780041205.01.T03 | MTR_1g077300 | 32.800 | 125 | 79 | 2 | 6 | 126 | 3 | 126 | 2.71e-13 | 68.2 |
| MsG0780041205.01.T03 | MTR_1g084950 | 37.097 | 124 | 70 | 3 | 1 | 120 | 1 | 120 | 2.98e-13 | 68.2 |
| MsG0780041205.01.T03 | MTR_1g077320 | 34.167 | 120 | 75 | 2 | 1 | 120 | 1 | 116 | 7.58e-13 | 67.0 |
| MsG0780041205.01.T03 | MTR_7g011950 | 32.237 | 152 | 96 | 4 | 1 | 149 | 1 | 148 | 1.19e-12 | 66.2 |
| MsG0780041205.01.T03 | MTR_3g467080 | 25.899 | 139 | 94 | 3 | 6 | 135 | 3 | 141 | 6.44e-12 | 64.3 |
| MsG0780041205.01.T02 | MTR_7g106510 | 89.216 | 510 | 48 | 2 | 1 | 510 | 1 | 503 | 0.0 | 878 |
| MsG0780041205.01.T02 | MTR_4g019670 | 87.115 | 520 | 56 | 2 | 1 | 510 | 1 | 519 | 0.0 | 861 |
| MsG0780041205.01.T02 | MTR_3g093900 | 44.597 | 583 | 237 | 11 | 1 | 510 | 1 | 570 | 1.28e-136 | 407 |
| MsG0780041205.01.T02 | MTR_8g467500 | 50.538 | 279 | 130 | 2 | 13 | 287 | 13 | 287 | 1.25e-66 | 217 |
| MsG0780041205.01.T02 | MTR_3g466980 | 32.727 | 165 | 107 | 2 | 1 | 164 | 1 | 162 | 1.29e-23 | 99.4 |
| MsG0780041205.01.T02 | MTR_5g075380 | 34.615 | 156 | 100 | 2 | 7 | 161 | 4 | 158 | 2.33e-23 | 97.1 |
| MsG0780041205.01.T02 | MTR_8g036130 | 38.168 | 131 | 79 | 1 | 4 | 132 | 1 | 131 | 3.09e-21 | 93.2 |
| MsG0780041205.01.T02 | MTR_4g032620 | 36.066 | 122 | 78 | 0 | 6 | 127 | 3 | 124 | 3.24e-21 | 92.8 |
| MsG0780041205.01.T02 | MTR_3g466830 | 33.333 | 150 | 99 | 1 | 6 | 154 | 2 | 151 | 4.16e-20 | 87.8 |
| MsG0780041205.01.T02 | MTR_4g031910 | 41.667 | 132 | 74 | 1 | 1 | 132 | 1 | 129 | 1.74e-19 | 87.8 |
| MsG0780041205.01.T02 | MTR_2g016210 | 30.345 | 145 | 100 | 1 | 7 | 150 | 4 | 148 | 4.88e-19 | 87.0 |
| MsG0780041205.01.T02 | MTR_3g065100 | 33.775 | 151 | 99 | 1 | 6 | 155 | 3 | 153 | 4.30e-18 | 84.0 |
| MsG0780041205.01.T02 | MTR_3g466890 | 30.065 | 153 | 106 | 1 | 6 | 157 | 2 | 154 | 8.66e-18 | 81.3 |
| MsG0780041205.01.T02 | MTR_1g090710 | 32.174 | 115 | 77 | 1 | 6 | 120 | 3 | 116 | 1.26e-17 | 80.5 |
| MsG0780041205.01.T02 | MTR_4g032260 | 41.053 | 95 | 56 | 0 | 38 | 132 | 35 | 129 | 1.87e-17 | 80.1 |
| MsG0780041205.01.T02 | MTR_3g031100 | 28.571 | 140 | 99 | 1 | 6 | 144 | 3 | 142 | 1.85e-16 | 79.3 |
| MsG0780041205.01.T02 | MTR_5g047580 | 34.167 | 120 | 75 | 2 | 1 | 120 | 1 | 116 | 2.25e-16 | 77.0 |
| MsG0780041205.01.T02 | MTR_4g032290 | 32.704 | 159 | 80 | 4 | 38 | 175 | 35 | 187 | 2.60e-16 | 78.6 |
| MsG0780041205.01.T02 | MTR_2g035610 | 36.800 | 125 | 76 | 1 | 1 | 125 | 1 | 122 | 2.62e-16 | 75.5 |
| MsG0780041205.01.T02 | MTR_4g028800 | 42.857 | 70 | 38 | 1 | 7 | 76 | 4 | 71 | 2.06e-15 | 71.6 |
| MsG0780041205.01.T02 | MTR_3g466930 | 33.065 | 124 | 82 | 1 | 35 | 157 | 2 | 125 | 3.65e-15 | 72.8 |
| MsG0780041205.01.T02 | MTR_3g031240 | 27.350 | 117 | 85 | 0 | 6 | 122 | 3 | 119 | 3.84e-15 | 73.9 |
| MsG0780041205.01.T02 | MTR_1g090783 | 25.517 | 145 | 107 | 1 | 6 | 150 | 2 | 145 | 3.85e-15 | 73.2 |
| MsG0780041205.01.T02 | MTR_1g090697 | 33.333 | 117 | 73 | 2 | 1 | 115 | 1 | 114 | 7.93e-15 | 72.4 |
| MsG0780041205.01.T02 | MTR_3g466900 | 31.452 | 124 | 84 | 1 | 35 | 157 | 2 | 125 | 1.15e-14 | 71.2 |
| MsG0780041205.01.T02 | MTR_1g077390 | 30.328 | 122 | 83 | 2 | 6 | 126 | 3 | 123 | 1.39e-14 | 71.6 |
| MsG0780041205.01.T02 | MTR_4g028720 | 34.694 | 147 | 92 | 3 | 6 | 149 | 3 | 148 | 2.09e-13 | 68.6 |
| MsG0780041205.01.T02 | MTR_1g077300 | 32.800 | 125 | 79 | 2 | 6 | 126 | 3 | 126 | 2.46e-13 | 68.2 |
| MsG0780041205.01.T02 | MTR_1g084950 | 37.097 | 124 | 70 | 3 | 1 | 120 | 1 | 120 | 3.34e-13 | 67.8 |
| MsG0780041205.01.T02 | MTR_4g063790 | 28.750 | 160 | 103 | 4 | 1 | 155 | 1 | 154 | 8.64e-13 | 67.0 |
| MsG0780041205.01.T02 | MTR_1g077320 | 34.167 | 120 | 75 | 2 | 1 | 120 | 1 | 116 | 1.00e-12 | 66.6 |
| MsG0780041205.01.T02 | MTR_7g011950 | 32.237 | 152 | 96 | 4 | 1 | 149 | 1 | 148 | 1.23e-12 | 66.2 |
| MsG0780041205.01.T02 | MTR_3g467080 | 25.899 | 139 | 94 | 3 | 6 | 135 | 3 | 141 | 6.95e-12 | 64.3 |
| MsG0780041205.01.T01 | MTR_4g019670 | 89.038 | 520 | 56 | 1 | 1 | 520 | 1 | 519 | 0.0 | 889 |
| MsG0780041205.01.T01 | MTR_7g106510 | 87.885 | 520 | 46 | 3 | 1 | 520 | 1 | 503 | 0.0 | 874 |
| MsG0780041205.01.T01 | MTR_3g093900 | 45.423 | 579 | 248 | 10 | 1 | 520 | 1 | 570 | 8.46e-141 | 418 |
| MsG0780041205.01.T01 | MTR_8g467500 | 50.538 | 279 | 130 | 2 | 13 | 287 | 13 | 287 | 1.63e-66 | 217 |
| MsG0780041205.01.T01 | MTR_3g466980 | 32.727 | 165 | 107 | 2 | 1 | 164 | 1 | 162 | 1.07e-23 | 99.8 |
| MsG0780041205.01.T01 | MTR_5g075380 | 34.615 | 156 | 100 | 2 | 7 | 161 | 4 | 158 | 2.45e-23 | 97.1 |
| MsG0780041205.01.T01 | MTR_8g036130 | 38.168 | 131 | 79 | 1 | 4 | 132 | 1 | 131 | 3.29e-21 | 93.2 |
| MsG0780041205.01.T01 | MTR_4g032620 | 36.066 | 122 | 78 | 0 | 6 | 127 | 3 | 124 | 3.42e-21 | 92.8 |
| MsG0780041205.01.T01 | MTR_3g466830 | 33.333 | 150 | 99 | 1 | 6 | 154 | 2 | 151 | 4.30e-20 | 87.8 |
| MsG0780041205.01.T01 | MTR_4g031910 | 41.667 | 132 | 74 | 1 | 1 | 132 | 1 | 129 | 1.86e-19 | 87.8 |
| MsG0780041205.01.T01 | MTR_2g016210 | 30.345 | 145 | 100 | 1 | 7 | 150 | 4 | 148 | 6.07e-19 | 86.7 |
| MsG0780041205.01.T01 | MTR_3g065100 | 33.775 | 151 | 99 | 1 | 6 | 155 | 3 | 153 | 3.86e-18 | 84.3 |
| MsG0780041205.01.T01 | MTR_3g466890 | 30.065 | 153 | 106 | 1 | 6 | 157 | 2 | 154 | 8.91e-18 | 81.3 |
| MsG0780041205.01.T01 | MTR_1g090710 | 32.174 | 115 | 77 | 1 | 6 | 120 | 3 | 116 | 1.30e-17 | 80.5 |
| MsG0780041205.01.T01 | MTR_4g032260 | 41.053 | 95 | 56 | 0 | 38 | 132 | 35 | 129 | 1.92e-17 | 80.1 |
| MsG0780041205.01.T01 | MTR_3g031100 | 28.571 | 140 | 99 | 1 | 6 | 144 | 3 | 142 | 1.94e-16 | 79.3 |
| MsG0780041205.01.T01 | MTR_5g047580 | 34.167 | 120 | 75 | 2 | 1 | 120 | 1 | 116 | 2.09e-16 | 77.0 |
| MsG0780041205.01.T01 | MTR_4g032290 | 32.704 | 159 | 80 | 4 | 38 | 175 | 35 | 187 | 2.55e-16 | 79.0 |
| MsG0780041205.01.T01 | MTR_2g035610 | 36.800 | 125 | 76 | 1 | 1 | 125 | 1 | 122 | 2.68e-16 | 75.5 |
| MsG0780041205.01.T01 | MTR_4g063790 | 28.750 | 160 | 103 | 4 | 1 | 155 | 1 | 154 | 1.97e-15 | 74.7 |
| MsG0780041205.01.T01 | MTR_4g028800 | 42.857 | 70 | 38 | 1 | 7 | 76 | 4 | 71 | 2.11e-15 | 71.6 |
| MsG0780041205.01.T01 | MTR_1g090783 | 25.517 | 145 | 107 | 1 | 6 | 150 | 2 | 145 | 3.45e-15 | 73.6 |
| MsG0780041205.01.T01 | MTR_3g466930 | 33.065 | 124 | 82 | 1 | 35 | 157 | 2 | 125 | 3.74e-15 | 72.8 |
| MsG0780041205.01.T01 | MTR_3g031240 | 27.350 | 117 | 85 | 0 | 6 | 122 | 3 | 119 | 4.34e-15 | 73.9 |
| MsG0780041205.01.T01 | MTR_1g090697 | 33.333 | 117 | 73 | 2 | 1 | 115 | 1 | 114 | 7.24e-15 | 72.8 |
| MsG0780041205.01.T01 | MTR_3g466900 | 31.452 | 124 | 84 | 1 | 35 | 157 | 2 | 125 | 1.18e-14 | 71.2 |
| MsG0780041205.01.T01 | MTR_1g077390 | 30.328 | 122 | 83 | 2 | 6 | 126 | 3 | 123 | 1.43e-14 | 71.6 |
| MsG0780041205.01.T01 | MTR_4g028720 | 34.694 | 147 | 92 | 3 | 6 | 149 | 3 | 148 | 1.74e-13 | 68.6 |
| MsG0780041205.01.T01 | MTR_1g077300 | 32.800 | 125 | 79 | 2 | 6 | 126 | 3 | 126 | 2.52e-13 | 68.2 |
| MsG0780041205.01.T01 | MTR_1g084950 | 37.097 | 124 | 70 | 3 | 1 | 120 | 1 | 120 | 3.33e-13 | 67.8 |
| MsG0780041205.01.T01 | MTR_1g077320 | 34.167 | 120 | 75 | 2 | 1 | 120 | 1 | 116 | 7.99e-13 | 66.6 |
| MsG0780041205.01.T01 | MTR_7g011950 | 32.237 | 152 | 96 | 4 | 1 | 149 | 1 | 148 | 1.29e-12 | 66.2 |
| MsG0780041205.01.T01 | MTR_3g467080 | 25.899 | 139 | 94 | 3 | 6 | 135 | 3 | 141 | 6.98e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041205.01.T03 | AT1G65300 | 29.870 | 231 | 134 | 6 | 6 | 220 | 2 | 220 | 1.09e-20 | 92.8 |
| MsG0780041205.01.T03 | AT2G40210 | 28.743 | 167 | 116 | 2 | 4 | 170 | 1 | 164 | 3.51e-19 | 90.1 |
| MsG0780041205.01.T03 | AT3G05860 | 32.576 | 132 | 85 | 2 | 1 | 131 | 1 | 129 | 4.27e-17 | 81.6 |
| MsG0780041205.01.T03 | AT3G05860 | 32.576 | 132 | 85 | 2 | 1 | 131 | 1 | 129 | 5.00e-17 | 81.6 |
| MsG0780041205.01.T03 | AT5G26650 | 32.456 | 114 | 77 | 0 | 7 | 120 | 2 | 115 | 1.19e-16 | 82.4 |
| MsG0780041205.01.T03 | AT3G05860 | 32.576 | 132 | 85 | 2 | 1 | 131 | 1 | 129 | 1.77e-16 | 79.0 |
| MsG0780041205.01.T03 | AT1G31630 | 33.043 | 115 | 76 | 1 | 6 | 120 | 2 | 115 | 2.39e-16 | 80.9 |
| MsG0780041205.01.T03 | AT5G27960 | 30.370 | 135 | 86 | 1 | 7 | 133 | 2 | 136 | 3.31e-16 | 80.5 |
| MsG0780041205.01.T03 | AT5G06500 | 30.556 | 144 | 99 | 1 | 6 | 149 | 3 | 145 | 1.19e-15 | 77.4 |
| MsG0780041205.01.T03 | AT1G31640 | 31.304 | 115 | 78 | 1 | 6 | 120 | 2 | 115 | 2.32e-15 | 79.0 |
| MsG0780041205.01.T03 | AT2G28700 | 31.624 | 117 | 80 | 0 | 4 | 120 | 1 | 117 | 5.23e-15 | 76.6 |
| MsG0780041205.01.T03 | AT1G65330 | 32.743 | 113 | 76 | 0 | 8 | 120 | 4 | 116 | 1.07e-14 | 75.1 |
| MsG0780041205.01.T03 | AT5G48670 | 35.043 | 117 | 76 | 0 | 6 | 122 | 3 | 119 | 1.93e-14 | 75.1 |
| MsG0780041205.01.T03 | AT5G26630 | 33.708 | 178 | 109 | 5 | 1 | 177 | 1 | 170 | 2.23e-14 | 72.8 |
| MsG0780041205.01.T03 | AT2G15660 | 28.846 | 156 | 104 | 5 | 40 | 194 | 30 | 179 | 2.24e-13 | 70.9 |
| MsG0780041205.01.T03 | AT1G22590 | 26.606 | 109 | 77 | 1 | 6 | 114 | 3 | 108 | 3.87e-13 | 68.2 |
| MsG0780041205.01.T03 | AT5G27810 | 31.034 | 87 | 60 | 0 | 34 | 120 | 3 | 89 | 5.76e-11 | 60.5 |
| MsG0780041205.01.T02 | AT1G65300 | 29.870 | 231 | 134 | 6 | 6 | 220 | 2 | 220 | 1.03e-20 | 92.8 |
| MsG0780041205.01.T02 | AT2G40210 | 28.743 | 167 | 116 | 2 | 4 | 170 | 1 | 164 | 3.80e-19 | 89.7 |
| MsG0780041205.01.T02 | AT3G05860 | 32.576 | 132 | 85 | 2 | 1 | 131 | 1 | 129 | 3.90e-17 | 81.6 |
| MsG0780041205.01.T02 | AT3G05860 | 32.576 | 132 | 85 | 2 | 1 | 131 | 1 | 129 | 4.65e-17 | 81.6 |
| MsG0780041205.01.T02 | AT5G26650 | 32.456 | 114 | 77 | 0 | 7 | 120 | 2 | 115 | 1.32e-16 | 82.0 |
| MsG0780041205.01.T02 | AT3G05860 | 32.576 | 132 | 85 | 2 | 1 | 131 | 1 | 129 | 1.38e-16 | 79.0 |
| MsG0780041205.01.T02 | AT1G31630 | 33.043 | 115 | 76 | 1 | 6 | 120 | 2 | 115 | 2.41e-16 | 80.9 |
| MsG0780041205.01.T02 | AT5G27960 | 30.370 | 135 | 86 | 1 | 7 | 133 | 2 | 136 | 4.12e-16 | 79.7 |
| MsG0780041205.01.T02 | AT5G06500 | 30.556 | 144 | 99 | 1 | 6 | 149 | 3 | 145 | 1.08e-15 | 77.0 |
| MsG0780041205.01.T02 | AT1G31640 | 31.304 | 115 | 78 | 1 | 6 | 120 | 2 | 115 | 2.64e-15 | 78.6 |
| MsG0780041205.01.T02 | AT2G28700 | 31.624 | 117 | 80 | 0 | 4 | 120 | 1 | 117 | 5.08e-15 | 76.6 |
| MsG0780041205.01.T02 | AT1G65330 | 32.743 | 113 | 76 | 0 | 8 | 120 | 4 | 116 | 1.23e-14 | 74.7 |
| MsG0780041205.01.T02 | AT5G26630 | 33.708 | 178 | 109 | 5 | 1 | 177 | 1 | 170 | 1.77e-14 | 73.2 |
| MsG0780041205.01.T02 | AT5G48670 | 35.043 | 117 | 76 | 0 | 6 | 122 | 3 | 119 | 1.88e-14 | 74.7 |
| MsG0780041205.01.T02 | AT2G15660 | 30.597 | 134 | 88 | 4 | 40 | 172 | 30 | 159 | 2.05e-13 | 70.5 |
| MsG0780041205.01.T02 | AT1G22590 | 26.606 | 109 | 77 | 1 | 6 | 114 | 3 | 108 | 3.51e-13 | 68.2 |
| MsG0780041205.01.T02 | AT5G27810 | 31.034 | 87 | 60 | 0 | 34 | 120 | 3 | 89 | 5.22e-11 | 60.5 |
| MsG0780041205.01.T01 | AT1G65300 | 29.870 | 231 | 134 | 6 | 6 | 220 | 2 | 220 | 1.13e-20 | 92.4 |
| MsG0780041205.01.T01 | AT2G40210 | 28.743 | 167 | 116 | 2 | 4 | 170 | 1 | 164 | 3.95e-19 | 89.7 |
| MsG0780041205.01.T01 | AT3G05860 | 32.576 | 132 | 85 | 2 | 1 | 131 | 1 | 129 | 4.39e-17 | 81.6 |
| MsG0780041205.01.T01 | AT3G05860 | 32.576 | 132 | 85 | 2 | 1 | 131 | 1 | 129 | 4.54e-17 | 81.6 |
| MsG0780041205.01.T01 | AT3G05860 | 32.576 | 132 | 85 | 2 | 1 | 131 | 1 | 129 | 1.45e-16 | 79.0 |
| MsG0780041205.01.T01 | AT5G26650 | 32.456 | 114 | 77 | 0 | 7 | 120 | 2 | 115 | 1.48e-16 | 81.6 |
| MsG0780041205.01.T01 | AT1G31630 | 33.043 | 115 | 76 | 1 | 6 | 120 | 2 | 115 | 2.50e-16 | 80.9 |
| MsG0780041205.01.T01 | AT5G27960 | 30.370 | 135 | 86 | 1 | 7 | 133 | 2 | 136 | 4.27e-16 | 79.7 |
| MsG0780041205.01.T01 | AT5G06500 | 30.556 | 144 | 99 | 1 | 6 | 149 | 3 | 145 | 1.07e-15 | 77.4 |
| MsG0780041205.01.T01 | AT1G31640 | 31.304 | 115 | 78 | 1 | 6 | 120 | 2 | 115 | 2.57e-15 | 79.0 |
| MsG0780041205.01.T01 | AT2G28700 | 31.624 | 117 | 80 | 0 | 4 | 120 | 1 | 117 | 5.22e-15 | 76.6 |
| MsG0780041205.01.T01 | AT1G65330 | 32.743 | 113 | 76 | 0 | 8 | 120 | 4 | 116 | 1.21e-14 | 74.7 |
| MsG0780041205.01.T01 | AT5G48670 | 35.043 | 117 | 76 | 0 | 6 | 122 | 3 | 119 | 1.81e-14 | 75.1 |
| MsG0780041205.01.T01 | AT5G26630 | 33.708 | 178 | 109 | 5 | 1 | 177 | 1 | 170 | 2.00e-14 | 73.2 |
| MsG0780041205.01.T01 | AT2G15660 | 28.846 | 156 | 104 | 5 | 40 | 194 | 30 | 179 | 2.24e-13 | 70.5 |
| MsG0780041205.01.T01 | AT1G22590 | 26.606 | 109 | 77 | 1 | 6 | 114 | 3 | 108 | 3.59e-13 | 68.2 |
| MsG0780041205.01.T01 | AT5G27810 | 31.034 | 87 | 60 | 0 | 34 | 120 | 3 | 89 | 5.65e-11 | 60.5 |
Find 119 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGCTAATCAAGCTAATTT+TGG | 0.158650 | 7:+88180124 | MsG0780041205.01.T03:CDS |
| TTGCTTCCTCAAGAAAATTT+TGG | 0.166377 | 7:+88180613 | MsG0780041205.01.T03:CDS |
| AACTTTGGTGGCAATATTAA+TGG | 0.198018 | 7:+88180961 | MsG0780041205.01.T03:CDS |
| TTGCCTCCTCAAGGATATTT+TGG | 0.199048 | 7:+88180391 | MsG0780041205.01.T03:CDS |
| TTGACTCAAACTTGGTTATT+AGG | 0.210241 | 7:-88179613 | None:intergenic |
| CAAAATCTTCAAAGTTAAAT+TGG | 0.211371 | 7:-88180639 | None:intergenic |
| TTGTCTCATCAAGGAAATTT+TGG | 0.233564 | 7:+88180730 | MsG0780041205.01.T03:CDS |
| GATTGTCACATGCTCCATTT+TGG | 0.244676 | 7:-88179504 | None:intergenic |
| CCAACAACCCTTGTCAGATT+TGG | 0.245325 | 7:+88180000 | MsG0780041205.01.T03:CDS |
| AACGGTGATGGGGTGCATAA+TGG | 0.258877 | 7:+88179950 | MsG0780041205.01.T03:CDS |
| GTTTCTTCCTCGAGGAAATC+TGG | 0.271699 | 7:+88180294 | MsG0780041205.01.T03:CDS |
| GAAAGGGTTGTTCACCAAAA+TGG | 0.296295 | 7:+88179490 | MsG0780041205.01.T03:CDS |
| AGAAAATGAAGAGACTTTAA+TGG | 0.308700 | 7:+88179733 | MsG0780041205.01.T03:CDS |
| ACGGTGATGGGGTGCATAAT+GGG | 0.323141 | 7:+88179951 | MsG0780041205.01.T03:CDS |
| AACTTTGTTGACAATAATTA+CGG | 0.325383 | 7:+88181009 | MsG0780041205.01.T03:CDS |
| GAGGCATGTGCGGTTGTGTT+TGG | 0.339289 | 7:+88179539 | MsG0780041205.01.T03:CDS |
| GAAGTTCAAGACAACTTTAG+AGG | 0.340558 | 7:+88180847 | MsG0780041205.01.T03:CDS |
| CAACAACCCTTGTCAGATTT+GGG | 0.353572 | 7:+88180001 | MsG0780041205.01.T03:CDS |
| CAAGTTTGAGTCAATGTCAT+TGG | 0.377334 | 7:+88179622 | MsG0780041205.01.T03:CDS |
| AGGCATGTGCGGTTGTGTTT+GGG | 0.389221 | 7:+88179540 | MsG0780041205.01.T03:CDS |
| TTTGAAGGTCAAGTAAACTT+TGG | 0.391480 | 7:+88180523 | MsG0780041205.01.T03:CDS |
| GTGATACAAAACCATCAATA+TGG | 0.392745 | 7:+88179567 | MsG0780041205.01.T03:CDS |
| GCAGGAGATGGCCATATTGA+TGG | 0.394229 | 7:-88179578 | None:intergenic |
| AAACCACCACTAGAATATTC+AGG | 0.410956 | 7:-88180178 | None:intergenic |
| CCTCCACTTGCATATCTTAG+TGG | 0.426541 | 7:+88180085 | MsG0780041205.01.T03:CDS |
| GAAAATGAAGAGACTTTAAT+GGG | 0.430958 | 7:+88179734 | MsG0780041205.01.T03:CDS |
| AACAATATGGGTAGCAACAT+TGG | 0.431457 | 7:+88180328 | MsG0780041205.01.T03:CDS |
| GATGTCTAGGCATTTAGAAA+AGG | 0.433553 | 7:+88179868 | MsG0780041205.01.T03:CDS |
| ATGTCTAGGCATTTAGAAAA+GGG | 0.436802 | 7:+88179869 | MsG0780041205.01.T03:CDS |
| TGTGCGGTTGTGTTTGGGCC+AGG | 0.446264 | 7:+88179545 | MsG0780041205.01.T03:CDS |
| CATAATGGGGTTAACATGTA+TGG | 0.446371 | 7:+88179965 | MsG0780041205.01.T03:CDS |
| CAATGACATTGACTCAAACT+TGG | 0.455302 | 7:-88179621 | None:intergenic |
| CCAAATCTGACAAGGGTTGT+TGG | 0.456247 | 7:-88180000 | None:intergenic |
| TTTCTTCCTCGAGGAAATCT+GGG | 0.457179 | 7:+88180295 | MsG0780041205.01.T03:CDS |
| TTTCATCAAAACAACTTTGG+TGG | 0.457377 | 7:+88180949 | MsG0780041205.01.T03:CDS |
| GGTGGCAATATTAATGGAGA+TGG | 0.459529 | 7:+88180967 | MsG0780041205.01.T03:CDS |
| TTACTTTACACAACGGTGAT+GGG | 0.461878 | 7:+88179939 | MsG0780041205.01.T03:CDS |
| GGAGGTCAAAGCAACTTTCA+AGG | 0.462180 | 7:+88180412 | MsG0780041205.01.T03:CDS |
| TTGTGTAAAGTAAAAGATAT+TGG | 0.463560 | 7:-88179929 | None:intergenic |
| ACTTTGTTGACAATAATTAC+GGG | 0.467038 | 7:+88181010 | MsG0780041205.01.T03:CDS |
| ATATCAACACCACCATTGCT+TGG | 0.469029 | 7:-88180919 | None:intergenic |
| ATATTAATGGAGATGGGATG+TGG | 0.470498 | 7:+88180974 | MsG0780041205.01.T03:CDS |
| TACCACATGCAAATCTGAAT+GGG | 0.471278 | 7:+88180470 | MsG0780041205.01.T03:CDS |
| TTTACTTTACACAACGGTGA+TGG | 0.473941 | 7:+88179938 | MsG0780041205.01.T03:CDS |
| ACAATATGGGTAGCAACATT+GGG | 0.477464 | 7:+88180329 | MsG0780041205.01.T03:CDS |
| CTACCACATGCAAATCTGAA+TGG | 0.479159 | 7:+88180469 | MsG0780041205.01.T03:CDS |
| ATACCACCACATACAAATCT+TGG | 0.490560 | 7:+88180688 | MsG0780041205.01.T03:CDS |
| CTTGCATATCTTAGTGGTGG+TGG | 0.499161 | 7:+88180091 | MsG0780041205.01.T03:CDS |
| TACGGGAGCAACTTCAACCC+TGG | 0.503874 | 7:+88181027 | MsG0780041205.01.T03:CDS |
| GATATTGGTGCCAACGGTGG+AGG | 0.504265 | 7:-88179914 | None:intergenic |
| ATTAGGTCTTCAGCCACTGC+AGG | 0.513329 | 7:-88179596 | None:intergenic |
| AACAACCTTGGAAGTAGCAT+GGG | 0.513933 | 7:+88180058 | MsG0780041205.01.T03:CDS |
| ATTGGTGCCAACGGTGGAGG+AGG | 0.517191 | 7:-88179911 | None:intergenic |
| ATACCACCTCATACAAATCC+TGG | 0.520709 | 7:+88180784 | MsG0780041205.01.T03:CDS |
| TGAGAATAAAACTCGAAGAA+AGG | 0.533789 | 7:+88179448 | MsG0780041205.01.T03:CDS |
| GACATTACAGGTAGCAACAC+AGG | 0.536241 | 7:+88180442 | MsG0780041205.01.T03:CDS |
| GGTGGAGGAGGATTATTAAG+AGG | 0.544411 | 7:-88179899 | None:intergenic |
| GTGGCAATATTAATGGAGAT+GGG | 0.552269 | 7:+88180968 | MsG0780041205.01.T03:CDS |
| CCAACACCAGGATTTGTATG+AGG | 0.556800 | 7:-88180790 | None:intergenic |
| TCTTCAGCCACTGCAGGAGA+TGG | 0.560210 | 7:-88179590 | None:intergenic |
| TGCTATAAGAGAAGATTGAA+AGG | 0.560605 | 7:+88179473 | MsG0780041205.01.T03:CDS |
| TTTGATGACAACACAGGTAG+CGG | 0.563188 | 7:+88180550 | MsG0780041205.01.T03:CDS |
| TGGTGGTGGTTGTGATAACT+TGG | 0.567708 | 7:+88180105 | MsG0780041205.01.T03:CDS |
| AGATCACTAGAAAGATGTCT+AGG | 0.570407 | 7:+88179855 | MsG0780041205.01.T03:CDS |
| TAACAACCTTGGAAGTAGCA+TGG | 0.574908 | 7:+88180057 | MsG0780041205.01.T03:CDS |
| TACTTTACACAACGGTGATG+GGG | 0.579959 | 7:+88179940 | MsG0780041205.01.T03:CDS |
| GTAGGTGTGTTGCCTCCTCA+AGG | 0.582180 | 7:+88180382 | MsG0780041205.01.T03:CDS |
| TAATAATCCTCCTCCACCGT+TGG | 0.582273 | 7:+88179904 | MsG0780041205.01.T03:CDS |
| AGTGGTTTCAATAACAACCT+TGG | 0.589310 | 7:+88180046 | MsG0780041205.01.T03:CDS |
| GTATCCCCATGCTACTTCCA+AGG | 0.589387 | 7:-88180063 | None:intergenic |
| CCACTAGAATATTCAGGTGA+TGG | 0.589851 | 7:-88180172 | None:intergenic |
| CGGTGATGGGGTGCATAATG+GGG | 0.590425 | 7:+88179952 | MsG0780041205.01.T03:CDS |
| CATGATATGTTTCTTCCTCG+AGG | 0.591879 | 7:+88180286 | MsG0780041205.01.T03:CDS |
| GTAAAAGATATTGGTGCCAA+CGG | 0.592046 | 7:-88179920 | None:intergenic |
| ACAACACAGGTAGCGGCATG+TGG | 0.592125 | 7:+88180557 | MsG0780041205.01.T03:CDS |
| GACAATCTTATGTGGTATTG+AGG | 0.594613 | 7:+88179520 | MsG0780041205.01.T03:CDS |
| GCTATAAGAGAAGATTGAAA+GGG | 0.594807 | 7:+88179474 | MsG0780041205.01.T03:CDS |
| TTTATTCAGAAGGAAATCCA+GGG | 0.595152 | 7:-88181044 | None:intergenic |
| TTTCTCGCCCAAATCTGACA+AGG | 0.596335 | 7:-88180008 | None:intergenic |
| CCACATACAAATCTTGGTGT+TGG | 0.598589 | 7:+88180694 | MsG0780041205.01.T03:CDS |
| ATAATATATGTAGCAACATG+TGG | 0.610672 | 7:+88180878 | MsG0780041205.01.T03:CDS |
| CATGAAAATCCAAGCAATGG+TGG | 0.610991 | 7:+88180910 | MsG0780041205.01.T03:CDS |
| TTCTCGCCCAAATCTGACAA+GGG | 0.612284 | 7:-88180007 | None:intergenic |
| CCACATGAAAATCCAAGCAA+TGG | 0.614633 | 7:+88180907 | MsG0780041205.01.T03:CDS |
| CCACTTGCATATCTTAGTGG+TGG | 0.615058 | 7:+88180088 | MsG0780041205.01.T03:CDS |
| TCACCTGAATATTCTAGTGG+TGG | 0.615267 | 7:+88180175 | MsG0780041205.01.T03:CDS |
| AAAGATATTGGTGCCAACGG+TGG | 0.617732 | 7:-88179917 | None:intergenic |
| CCTCATACAAATCCTGGTGT+TGG | 0.617961 | 7:+88180790 | MsG0780041205.01.T03:CDS |
| AAAGTTGATCAAATGAGCAG+TGG | 0.618596 | 7:+88180028 | MsG0780041205.01.T03:CDS |
| CCATCACATGAAAATCATAG+TGG | 0.621754 | 7:+88180256 | MsG0780041205.01.T03:CDS |
| TGTCTAGGCATTTAGAAAAG+GGG | 0.623976 | 7:+88179870 | MsG0780041205.01.T03:CDS |
| GAAAATCCTAGTGGTGGTGT+AGG | 0.627650 | 7:+88180364 | MsG0780041205.01.T03:CDS |
| CCATCACCTGAATATTCTAG+TGG | 0.635359 | 7:+88180172 | MsG0780041205.01.T03:CDS |
| GTTGATGTGTTGTCTCATCA+AGG | 0.635762 | 7:+88180721 | MsG0780041205.01.T03:CDS |
| GTTGATGTGTTGTCTCATCA+AGG | 0.635762 | 7:+88180817 | MsG0780041205.01.T03:CDS |
| ATGCATCAAATTGAAAACGA+AGG | 0.641960 | 7:+88179764 | MsG0780041205.01.T03:CDS |
| TTTGGAGTTGATAACAACAC+AGG | 0.642445 | 7:+88180748 | MsG0780041205.01.T03:CDS |
| CCACATTCAAATTCGAGTGG+TGG | 0.643895 | 7:+88180583 | MsG0780041205.01.T03:CDS |
| TTCTTCCTCGAGGAAATCTG+GGG | 0.645397 | 7:+88180296 | MsG0780041205.01.T03:CDS |
| ACACCAAGATTTGTATGTGG+TGG | 0.650459 | 7:-88180691 | None:intergenic |
| AACACACCTACACCACCACT+AGG | 0.650603 | 7:-88180370 | None:intergenic |
| ACATCAACATCACCAACACC+AGG | 0.652418 | 7:-88180802 | None:intergenic |
| AATATGGCCATCTCCTGCAG+TGG | 0.655817 | 7:+88179583 | MsG0780041205.01.T03:CDS |
| CCTCCAAAATATCCTTGAGG+AGG | 0.656666 | 7:-88180394 | None:intergenic |
| CCAACACCAAGATTTGTATG+TGG | 0.658592 | 7:-88180694 | None:intergenic |
| ATGTGGTATTGAGGCATGTG+CGG | 0.658684 | 7:+88179529 | MsG0780041205.01.T03:CDS |
| TGACCTCCAAAATATCCTTG+AGG | 0.660910 | 7:-88180397 | None:intergenic |
| TTCCCATTCAGATTTGCATG+TGG | 0.661550 | 7:-88180472 | None:intergenic |
| CCACCACTCGAATTTGAATG+TGG | 0.662521 | 7:-88180583 | None:intergenic |
| GAGCATGTGACAATCTTATG+TGG | 0.668241 | 7:+88179512 | MsG0780041205.01.T03:CDS |
| ACACCAGGATTTGTATGAGG+TGG | 0.668736 | 7:-88180787 | None:intergenic |
| ACATTACAGGTAGCAACACA+GGG | 0.671623 | 7:+88180443 | MsG0780041205.01.T03:CDS |
| TCACATGAAAATCCTAGTGG+TGG | 0.674534 | 7:+88180358 | MsG0780041205.01.T03:CDS |
| CCACTAAGATATGCAAGTGG+AGG | 0.680818 | 7:-88180085 | None:intergenic |
| CAATCACATGAAAATCCTAG+TGG | 0.684612 | 7:+88180355 | MsG0780041205.01.T03:CDS |
| CCACCACTAAGATATGCAAG+TGG | 0.695087 | 7:-88180088 | None:intergenic |
| ACAACCTTGGAAGTAGCATG+GGG | 0.697964 | 7:+88180059 | MsG0780041205.01.T03:CDS |
| ATACCACATTCAAATTCGAG+TGG | 0.714863 | 7:+88180580 | MsG0780041205.01.T03:CDS |
| AAATGCCCCAGATTTCCTCG+AGG | 0.761109 | 7:-88180301 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTTGTTGACAATAATTA+CGG | + | Chr7:88181009-88181028 | MsG0780041205.01.T03:CDS | 20.0% |
| !! | CAAAATCTTCAAAGTTAAAT+TGG | - | Chr7:88180642-88180661 | None:intergenic | 20.0% |
| !! | TTGTGTAAAGTAAAAGATAT+TGG | - | Chr7:88179932-88179951 | None:intergenic | 20.0% |
| !!! | AGTTTTATTCTCAATCAATT+TGG | - | Chr7:88179441-88179460 | None:intergenic | 20.0% |
| !!! | ATATCTTTTACTTTACACAA+CGG | + | Chr7:88179932-88179951 | MsG0780041205.01.T03:CDS | 20.0% |
| !!! | TTTCTTTGTTGATCTTTTTA+AGG | - | Chr7:88179718-88179737 | None:intergenic | 20.0% |
| ! | ACTTTGTTGACAATAATTAC+GGG | + | Chr7:88181010-88181029 | MsG0780041205.01.T03:CDS | 25.0% |
| ! | AGAAAATGAAGAGACTTTAA+TGG | + | Chr7:88179733-88179752 | MsG0780041205.01.T03:CDS | 25.0% |
| ! | ATAATATATGTAGCAACATG+TGG | + | Chr7:88180878-88180897 | MsG0780041205.01.T03:CDS | 25.0% |
| ! | GAAAATGAAGAGACTTTAAT+GGG | + | Chr7:88179734-88179753 | MsG0780041205.01.T03:CDS | 25.0% |
| !! | ACTTTTCATCAAAACAACTT+TGG | + | Chr7:88180946-88180965 | MsG0780041205.01.T03:CDS | 25.0% |
| !! | GGGCATTTTATTAACAATAT+GGG | + | Chr7:88180316-88180335 | MsG0780041205.01.T03:CDS | 25.0% |
| !!! | GGAAAATTTTGATAGTATCA+TGG | + | Chr7:88180228-88180247 | MsG0780041205.01.T03:CDS | 25.0% |
| ATGCATCAAATTGAAAACGA+AGG | + | Chr7:88179764-88179783 | MsG0780041205.01.T03:CDS | 30.0% | |
| ATGTCTAGGCATTTAGAAAA+GGG | + | Chr7:88179869-88179888 | MsG0780041205.01.T03:CDS | 30.0% | |
| GCTATAAGAGAAGATTGAAA+GGG | + | Chr7:88179474-88179493 | MsG0780041205.01.T03:CDS | 30.0% | |
| GTGATACAAAACCATCAATA+TGG | + | Chr7:88179567-88179586 | MsG0780041205.01.T03:CDS | 30.0% | |
| TATCCTCCAAAAAAGTCAAT+TGG | - | Chr7:88179673-88179692 | None:intergenic | 30.0% | |
| TGAGAATAAAACTCGAAGAA+AGG | + | Chr7:88179448-88179467 | MsG0780041205.01.T03:CDS | 30.0% | |
| TGCTATAAGAGAAGATTGAA+AGG | + | Chr7:88179473-88179492 | MsG0780041205.01.T03:CDS | 30.0% | |
| TTGACTCAAACTTGGTTATT+AGG | - | Chr7:88179616-88179635 | None:intergenic | 30.0% | |
| TTTCATCAAAACAACTTTGG+TGG | + | Chr7:88180949-88180968 | MsG0780041205.01.T03:CDS | 30.0% | |
| TTTGAAGGTCAAGTAAACTT+TGG | + | Chr7:88180523-88180542 | MsG0780041205.01.T03:CDS | 30.0% | |
| ! | AACTTTGGTGGCAATATTAA+TGG | + | Chr7:88180961-88180980 | MsG0780041205.01.T03:CDS | 30.0% |
| ! | TGACCTTCAAAATTTTCTTG+AGG | - | Chr7:88180514-88180533 | None:intergenic | 30.0% |
| ! | TTGCTTCCTCAAGAAAATTT+TGG | + | Chr7:88180613-88180632 | MsG0780041205.01.T03:CDS | 30.0% |
| ! | TTGGCTAATCAAGCTAATTT+TGG | + | Chr7:88180124-88180143 | MsG0780041205.01.T03:CDS | 30.0% |
| ! | TTGTCTCATCAAGGAAATTT+TGG | + | Chr7:88180730-88180749 | MsG0780041205.01.T03:CDS | 30.0% |
| !! | GAAGATTTTGATATCAACAC+AGG | + | Chr7:88180652-88180671 | MsG0780041205.01.T03:CDS | 30.0% |
| !! | GGGGCATTTTATTAACAATA+TGG | + | Chr7:88180315-88180334 | MsG0780041205.01.T03:CDS | 30.0% |
| !!! | AGCGTTTTTTCAAGACAATT+TGG | + | Chr7:88180207-88180226 | MsG0780041205.01.T03:CDS | 30.0% |
| !!! | ATTGACTTTTTTGGAGGATA+AGG | + | Chr7:88179673-88179692 | MsG0780041205.01.T03:CDS | 30.0% |
| !!! | GGTGGTTTTGATAATAGAAT+GGG | + | Chr7:88180145-88180164 | MsG0780041205.01.T03:CDS | 30.0% |
| !!! | GTGGTTTTGATAATAGAATG+GGG | + | Chr7:88180146-88180165 | MsG0780041205.01.T03:CDS | 30.0% |
| !!! | TGGTGGTTTTGATAATAGAA+TGG | + | Chr7:88180144-88180163 | MsG0780041205.01.T03:CDS | 30.0% |
| !!! | TTGACTTTTTTGGAGGATAA+GGG | + | Chr7:88179674-88179693 | MsG0780041205.01.T03:CDS | 30.0% |
| AAACCACCACTAGAATATTC+AGG | - | Chr7:88180181-88180200 | None:intergenic | 35.0% | |
| AACAATATGGGTAGCAACAT+TGG | + | Chr7:88180328-88180347 | MsG0780041205.01.T03:CDS | 35.0% | |
| ACAATATGGGTAGCAACATT+GGG | + | Chr7:88180329-88180348 | MsG0780041205.01.T03:CDS | 35.0% | |
| AGATCACTAGAAAGATGTCT+AGG | + | Chr7:88179855-88179874 | MsG0780041205.01.T03:CDS | 35.0% | |
| AGTGGTTTCAATAACAACCT+TGG | + | Chr7:88180046-88180065 | MsG0780041205.01.T03:CDS | 35.0% | |
| ATACCACATTCAAATTCGAG+TGG | + | Chr7:88180580-88180599 | MsG0780041205.01.T03:CDS | 35.0% | |
| ATACCACCACATACAAATCT+TGG | + | Chr7:88180688-88180707 | MsG0780041205.01.T03:CDS | 35.0% | |
| ATATTAATGGAGATGGGATG+TGG | + | Chr7:88180974-88180993 | MsG0780041205.01.T03:CDS | 35.0% | |
| CAAGTTTGAGTCAATGTCAT+TGG | + | Chr7:88179622-88179641 | MsG0780041205.01.T03:CDS | 35.0% | |
| CAATCACATGAAAATCCTAG+TGG | + | Chr7:88180355-88180374 | MsG0780041205.01.T03:CDS | 35.0% | |
| CCATCACATGAAAATCATAG+TGG | + | Chr7:88180256-88180275 | MsG0780041205.01.T03:CDS | 35.0% | |
| GAAGTTCAAGACAACTTTAG+AGG | + | Chr7:88180847-88180866 | MsG0780041205.01.T03:CDS | 35.0% | |
| GACAATCTTATGTGGTATTG+AGG | + | Chr7:88179520-88179539 | MsG0780041205.01.T03:CDS | 35.0% | |
| GATGTCTAGGCATTTAGAAA+AGG | + | Chr7:88179868-88179887 | MsG0780041205.01.T03:CDS | 35.0% | |
| GTGGCAATATTAATGGAGAT+GGG | + | Chr7:88180968-88180987 | MsG0780041205.01.T03:CDS | 35.0% | |
| TACCACATGCAAATCTGAAT+GGG | + | Chr7:88180470-88180489 | MsG0780041205.01.T03:CDS | 35.0% | |
| TGTCTAGGCATTTAGAAAAG+GGG | + | Chr7:88179870-88179889 | MsG0780041205.01.T03:CDS | 35.0% | |
| TTACTTTACACAACGGTGAT+GGG | + | Chr7:88179939-88179958 | MsG0780041205.01.T03:CDS | 35.0% | |
| TTTACTTTACACAACGGTGA+TGG | + | Chr7:88179938-88179957 | MsG0780041205.01.T03:CDS | 35.0% | |
| ! | AAAGTTGATCAAATGAGCAG+TGG | + | Chr7:88180028-88180047 | MsG0780041205.01.T03:CDS | 35.0% |
| ! | CATAATGGGGTTAACATGTA+TGG | + | Chr7:88179965-88179984 | MsG0780041205.01.T03:CDS | 35.0% |
| ! | CCACTATGATTTTCATGTGA+TGG | - | Chr7:88180259-88180278 | None:intergenic | 35.0% |
| ! | CCTCCTCAAGAAAATTTTGA+AGG | + | Chr7:88180508-88180527 | MsG0780041205.01.T03:CDS | 35.0% |
| ! | CCTTCAAAATTTTCTTGAGG+AGG | - | Chr7:88180511-88180530 | None:intergenic | 35.0% |
| ! | CTTCCTCAAGAAAATTTTGG+AGG | + | Chr7:88180616-88180635 | MsG0780041205.01.T03:CDS | 35.0% |
| ! | GCTAATCAAGCTAATTTTGG+TGG | + | Chr7:88180127-88180146 | MsG0780041205.01.T03:CDS | 35.0% |
| !! | CAAGGTTTTGATGACATTAC+AGG | + | Chr7:88180430-88180449 | MsG0780041205.01.T03:CDS | 35.0% |
| !! | CAATGACATTGACTCAAACT+TGG | - | Chr7:88179624-88179643 | None:intergenic | 35.0% |
| !! | GTAAAAGATATTGGTGCCAA+CGG | - | Chr7:88179923-88179942 | None:intergenic | 35.0% |
| !! | TTTGGAGTTGATAACAACAC+AGG | + | Chr7:88180748-88180767 | MsG0780041205.01.T03:CDS | 35.0% |
| !!! | ATTGATGGTTTTGTATCACC+TGG | - | Chr7:88179566-88179585 | None:intergenic | 35.0% |
| !!! | GACTGACCAATTGACTTTTT+TGG | + | Chr7:88179664-88179683 | MsG0780041205.01.T03:CDS | 35.0% |
| !!! | TGACCAATTGACTTTTTTGG+AGG | + | Chr7:88179667-88179686 | MsG0780041205.01.T03:CDS | 35.0% |
| AACAACCTTGGAAGTAGCAT+GGG | + | Chr7:88180058-88180077 | MsG0780041205.01.T03:CDS | 40.0% | |
| ACACCAAGATTTGTATGTGG+TGG | - | Chr7:88180694-88180713 | None:intergenic | 40.0% | |
| ACATTACAGGTAGCAACACA+GGG | + | Chr7:88180443-88180462 | MsG0780041205.01.T03:CDS | 40.0% | |
| ATACCACCTCATACAAATCC+TGG | + | Chr7:88180784-88180803 | MsG0780041205.01.T03:CDS | 40.0% | |
| ATATCAACACCACCATTGCT+TGG | - | Chr7:88180922-88180941 | None:intergenic | 40.0% | |
| CAACAACCCTTGTCAGATTT+GGG | + | Chr7:88180001-88180020 | MsG0780041205.01.T03:CDS | 40.0% | |
| CATGAAAATCCAAGCAATGG+TGG | + | Chr7:88180910-88180929 | MsG0780041205.01.T03:CDS | 40.0% | |
| CATGATATGTTTCTTCCTCG+AGG | + | Chr7:88180286-88180305 | MsG0780041205.01.T03:CDS | 40.0% | |
| CCAACACCAAGATTTGTATG+TGG | - | Chr7:88180697-88180716 | None:intergenic | 40.0% | |
| CCACATGAAAATCCAAGCAA+TGG | + | Chr7:88180907-88180926 | MsG0780041205.01.T03:CDS | 40.0% | |
| CCACTAGAATATTCAGGTGA+TGG | - | Chr7:88180175-88180194 | None:intergenic | 40.0% | |
| CCATCACCTGAATATTCTAG+TGG | + | Chr7:88180172-88180191 | MsG0780041205.01.T03:CDS | 40.0% | |
| CTACCACATGCAAATCTGAA+TGG | + | Chr7:88180469-88180488 | MsG0780041205.01.T03:CDS | 40.0% | |
| GAAAGGGTTGTTCACCAAAA+TGG | + | Chr7:88179490-88179509 | MsG0780041205.01.T03:CDS | 40.0% | |
| GAGCATGTGACAATCTTATG+TGG | + | Chr7:88179512-88179531 | MsG0780041205.01.T03:CDS | 40.0% | |
| GGTGGCAATATTAATGGAGA+TGG | + | Chr7:88180967-88180986 | MsG0780041205.01.T03:CDS | 40.0% | |
| GTTGATGTGTTGTCTCATCA+AGG | + | Chr7:88180721-88180740 | MsG0780041205.01.T03:CDS | 40.0% | |
| TAACAACCTTGGAAGTAGCA+TGG | + | Chr7:88180057-88180076 | MsG0780041205.01.T03:CDS | 40.0% | |
| TACTTTACACAACGGTGATG+GGG | + | Chr7:88179940-88179959 | MsG0780041205.01.T03:CDS | 40.0% | |
| TCACATGAAAATCCTAGTGG+TGG | + | Chr7:88180358-88180377 | MsG0780041205.01.T03:CDS | 40.0% | |
| TCACCTGAATATTCTAGTGG+TGG | + | Chr7:88180175-88180194 | MsG0780041205.01.T03:CDS | 40.0% | |
| TGACCTCCAAAATATCCTTG+AGG | - | Chr7:88180400-88180419 | None:intergenic | 40.0% | |
| TTCCCATTCAGATTTGCATG+TGG | - | Chr7:88180475-88180494 | None:intergenic | 40.0% | |
| TTTCTTCCTCGAGGAAATCT+GGG | + | Chr7:88180295-88180314 | MsG0780041205.01.T03:CDS | 40.0% | |
| ! | CCACATACAAATCTTGGTGT+TGG | + | Chr7:88180694-88180713 | MsG0780041205.01.T03:CDS | 40.0% |
| ! | CCATTGCTTGGATTTTCATG+TGG | - | Chr7:88180910-88180929 | None:intergenic | 40.0% |
| ! | GATTGTCACATGCTCCATTT+TGG | - | Chr7:88179507-88179526 | None:intergenic | 40.0% |
| ! | TGGCCTCCAAAATTTTCTTG+AGG | - | Chr7:88180622-88180641 | None:intergenic | 40.0% |
| ! | TTGCCTCCTCAAGGATATTT+TGG | + | Chr7:88180391-88180410 | MsG0780041205.01.T03:CDS | 40.0% |
| ! | TTGCTTGGATTTTCATGTGG+AGG | - | Chr7:88180907-88180926 | None:intergenic | 40.0% |
| ! | TTTGATGACAACACAGGTAG+CGG | + | Chr7:88180550-88180569 | MsG0780041205.01.T03:CDS | 40.0% |
| !!! | GGATGTTTTGATGACAACAC+AGG | + | Chr7:88180544-88180563 | MsG0780041205.01.T03:CDS | 40.0% |
| ACAACCTTGGAAGTAGCATG+GGG | + | Chr7:88180059-88180078 | MsG0780041205.01.T03:CDS | 45.0% | |
| ACACCAGGATTTGTATGAGG+TGG | - | Chr7:88180790-88180809 | None:intergenic | 45.0% | |
| ACATCAACATCACCAACACC+AGG | - | Chr7:88180709-88180728 | None:intergenic | 45.0% | |
| CCAAATCTGACAAGGGTTGT+TGG | - | Chr7:88180003-88180022 | None:intergenic | 45.0% | |
| CCAACAACCCTTGTCAGATT+TGG | + | Chr7:88180000-88180019 | MsG0780041205.01.T03:CDS | 45.0% | |
| CCAACACCAGGATTTGTATG+AGG | - | Chr7:88180793-88180812 | None:intergenic | 45.0% | |
| CCACATTCAAATTCGAGTGG+TGG | + | Chr7:88180583-88180602 | MsG0780041205.01.T03:CDS | 45.0% | |
| CCACCACTAAGATATGCAAG+TGG | - | Chr7:88180091-88180110 | None:intergenic | 45.0% | |
| CCACCACTCGAATTTGAATG+TGG | - | Chr7:88180586-88180605 | None:intergenic | 45.0% | |
| CCACTAAGATATGCAAGTGG+AGG | - | Chr7:88180088-88180107 | None:intergenic | 45.0% | |
| CCACTTGCATATCTTAGTGG+TGG | + | Chr7:88180088-88180107 | MsG0780041205.01.T03:CDS | 45.0% | |
| CCTCATACAAATCCTGGTGT+TGG | + | Chr7:88180790-88180809 | MsG0780041205.01.T03:CDS | 45.0% | |
| CCTCCAAAATATCCTTGAGG+AGG | - | Chr7:88180397-88180416 | None:intergenic | 45.0% | |
| CCTCCACTTGCATATCTTAG+TGG | + | Chr7:88180085-88180104 | MsG0780041205.01.T03:CDS | 45.0% | |
| CTTGCATATCTTAGTGGTGG+TGG | + | Chr7:88180091-88180110 | MsG0780041205.01.T03:CDS | 45.0% | |
| GACATTACAGGTAGCAACAC+AGG | + | Chr7:88180442-88180461 | MsG0780041205.01.T03:CDS | 45.0% | |
| GGAGGTCAAAGCAACTTTCA+AGG | + | Chr7:88180412-88180431 | MsG0780041205.01.T03:CDS | 45.0% | |
| GGTGGAGGAGGATTATTAAG+AGG | - | Chr7:88179902-88179921 | None:intergenic | 45.0% | |
| GTTTCTTCCTCGAGGAAATC+TGG | + | Chr7:88180294-88180313 | MsG0780041205.01.T03:CDS | 45.0% | |
| TAATAATCCTCCTCCACCGT+TGG | + | Chr7:88179904-88179923 | MsG0780041205.01.T03:CDS | 45.0% | |
| TTCTCGCCCAAATCTGACAA+GGG | - | Chr7:88180010-88180029 | None:intergenic | 45.0% | |
| TTCTTCCTCGAGGAAATCTG+GGG | + | Chr7:88180296-88180315 | MsG0780041205.01.T03:CDS | 45.0% | |
| TTTCTCGCCCAAATCTGACA+AGG | - | Chr7:88180011-88180030 | None:intergenic | 45.0% | |
| ! | ATGTGGTATTGAGGCATGTG+CGG | + | Chr7:88179529-88179548 | MsG0780041205.01.T03:CDS | 45.0% |
| ! | GAAAATCCTAGTGGTGGTGT+AGG | + | Chr7:88180364-88180383 | MsG0780041205.01.T03:CDS | 45.0% |
| !! | AAAGATATTGGTGCCAACGG+TGG | - | Chr7:88179920-88179939 | None:intergenic | 45.0% |
| !! | CCTCCTCAAGGATATTTTGG+AGG | + | Chr7:88180394-88180413 | MsG0780041205.01.T03:CDS | 45.0% |
| !! | TGGTGGTGGTTGTGATAACT+TGG | + | Chr7:88180105-88180124 | MsG0780041205.01.T03:CDS | 45.0% |
| AAATGCCCCAGATTTCCTCG+AGG | - | Chr7:88180304-88180323 | None:intergenic | 50.0% | |
| AACACACCTACACCACCACT+AGG | - | Chr7:88180373-88180392 | None:intergenic | 50.0% | |
| AATATGGCCATCTCCTGCAG+TGG | + | Chr7:88179583-88179602 | MsG0780041205.01.T03:CDS | 50.0% | |
| AGGCATGTGCGGTTGTGTTT+GGG | + | Chr7:88179540-88179559 | MsG0780041205.01.T03:CDS | 50.0% | |
| ATTAGGTCTTCAGCCACTGC+AGG | - | Chr7:88179599-88179618 | None:intergenic | 50.0% | |
| GCAGGAGATGGCCATATTGA+TGG | - | Chr7:88179581-88179600 | None:intergenic | 50.0% | |
| ! | GTATCCCCATGCTACTTCCA+AGG | - | Chr7:88180066-88180085 | None:intergenic | 50.0% |
| !! | AACGGTGATGGGGTGCATAA+TGG | + | Chr7:88179950-88179969 | MsG0780041205.01.T03:CDS | 50.0% |
| !! | ACGGTGATGGGGTGCATAAT+GGG | + | Chr7:88179951-88179970 | MsG0780041205.01.T03:CDS | 50.0% |
| GAGGCATGTGCGGTTGTGTT+TGG | + | Chr7:88179539-88179558 | MsG0780041205.01.T03:CDS | 55.0% | |
| GTAGGTGTGTTGCCTCCTCA+AGG | + | Chr7:88180382-88180401 | MsG0780041205.01.T03:CDS | 55.0% | |
| TACGGGAGCAACTTCAACCC+TGG | + | Chr7:88181027-88181046 | MsG0780041205.01.T03:CDS | 55.0% | |
| TCTTCAGCCACTGCAGGAGA+TGG | - | Chr7:88179593-88179612 | None:intergenic | 55.0% | |
| ! | ACAACACAGGTAGCGGCATG+TGG | + | Chr7:88180557-88180576 | MsG0780041205.01.T03:CDS | 55.0% |
| !! | CGGTGATGGGGTGCATAATG+GGG | + | Chr7:88179952-88179971 | MsG0780041205.01.T03:CDS | 55.0% |
| !! | GATATTGGTGCCAACGGTGG+AGG | - | Chr7:88179917-88179936 | None:intergenic | 55.0% |
| TGTGCGGTTGTGTTTGGGCC+AGG | + | Chr7:88179545-88179564 | MsG0780041205.01.T03:CDS | 60.0% | |
| !! | ATTGGTGCCAACGGTGGAGG+AGG | - | Chr7:88179914-88179933 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 88179407 | 88181065 | 88179407 | ID=MsG0780041205.01;Name=MsG0780041205.01 |
| Chr7 | mRNA | 88179407 | 88181065 | 88179407 | ID=MsG0780041205.01.T01;Parent=MsG0780041205.01;Name=MsG0780041205.01.T01;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|0|0|2|0|520 |
| Chr7 | exon | 88180770 | 88181065 | 88180770 | ID=MsG0780041205.01.T01:exon:52263;Parent=MsG0780041205.01.T01 |
| Chr7 | CDS | 88179407 | 88180673 | 88179407 | ID=MsG0780041205.01.T01:cds;Parent=MsG0780041205.01.T01 |
| Chr7 | CDS | 88180770 | 88181065 | 88180770 | ID=MsG0780041205.01.T01:cds;Parent=MsG0780041205.01.T01 |
| Chr7 | mRNA | 88179407 | 88181065 | 88179407 | ID=MsG0780041205.01.T02;Parent=MsG0780041205.01;Name=MsG0780041205.01.T02;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0|0|2|0|510 |
| Chr7 | exon | 88180800 | 88181065 | 88180800 | ID=MsG0780041205.01.T02:exon:52264;Parent=MsG0780041205.01.T02 |
| Chr7 | CDS | 88179407 | 88180673 | 88179407 | ID=MsG0780041205.01.T02:cds;Parent=MsG0780041205.01.T02 |
| Chr7 | CDS | 88180800 | 88181065 | 88180800 | ID=MsG0780041205.01.T02:cds;Parent=MsG0780041205.01.T02 |
| Chr7 | mRNA | 88179407 | 88181065 | 88179407 | ID=MsG0780041205.01.T03;Parent=MsG0780041205.01;Name=MsG0780041205.01.T03;_AED=0.05;_eAED=0.05;_QI=0|-1|0|1|-1|1|1|0|552 |
| Chr7 | exon | 88179407 | 88181065 | 88179407 | ID=MsG0780041205.01.T03:exon:52265;Parent=MsG0780041205.01.T03 |
| Chr7 | CDS | 88179407 | 88181065 | 88179407 | ID=MsG0780041205.01.T03:cds;Parent=MsG0780041205.01.T03 |
| Gene Sequence |
| Protein sequence |
