AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017422.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017422.01.T01 MTR_3g107360 76.866 670 13 5 33 563 135 801 0.0 1000
MsG0380017422.01.T01 MTR_3g107320 53.778 675 159 13 34 563 139 805 0.0 666
MsG0380017422.01.T01 MTR_4g010650 49.926 673 184 13 33 563 126 787 0.0 613
MsG0380017422.01.T01 MTR_2g103730 49.407 674 187 13 33 563 126 788 0.0 587
MsG0380017422.01.T01 MTR_5g011050 37.351 672 263 14 41 563 172 834 3.88e-134 411
MsG0380017422.01.T01 MTR_3g114840 37.963 648 238 16 75 563 189 831 2.42e-132 407
MsG0380017422.01.T01 MTR_8g088690 37.654 648 236 16 76 563 183 822 4.08e-131 403
MsG0380017422.01.T01 MTR_5g011060 36.564 681 256 15 41 563 166 828 6.32e-131 403
MsG0380017422.01.T01 MTR_7g075910 37.389 674 259 18 41 563 433 1094 1.58e-129 406
MsG0380017422.01.T01 MTR_2g100250 37.684 613 230 12 74 559 143 730 1.04e-126 389
MsG0380017422.01.T01 MTR_8g033080 36.230 679 265 17 41 563 363 1029 1.89e-126 396
MsG0380017422.01.T01 MTR_5g023050 35.447 694 267 17 41 563 168 851 9.37e-126 390
MsG0380017422.01.T01 MTR_8g016160 35.610 615 234 14 74 563 147 724 8.61e-109 342
MsG0380017422.01.T01 MTR_3g114840 37.043 575 199 15 75 490 189 759 5.83e-105 334
MsG0380017422.01.T01 MTR_8g033080 31.489 470 167 13 41 361 363 826 9.02e-60 213
MsG0380017422.01.T01 MTR_1g083620 27.815 302 147 12 303 567 737 1004 1.77e-17 87.0
MsG0380017422.01.T01 MTR_1g083620 27.815 302 147 12 303 567 477 744 1.78e-17 86.7
MsG0380017422.01.T01 MTR_2g435560 31.250 192 84 4 303 464 647 820 2.61e-14 76.6
MsG0380017422.01.T01 MTR_2g435560 31.250 192 84 4 303 464 782 955 2.87e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017422.01.T01 AT3G15730 47.774 674 198 12 33 563 127 789 0.0 601
MsG0380017422.01.T01 AT1G52570 47.774 674 198 13 33 563 127 789 0.0 597
MsG0380017422.01.T01 AT1G52570 47.774 674 198 13 33 563 127 789 0.0 597
MsG0380017422.01.T01 AT1G52570 47.774 674 198 13 33 563 127 789 0.0 597
MsG0380017422.01.T01 AT5G25370 49.185 675 190 15 33 563 134 799 0.0 583
MsG0380017422.01.T01 AT5G25370 49.185 675 190 15 33 563 134 799 0.0 583
MsG0380017422.01.T01 AT5G25370 49.185 675 190 15 33 563 134 799 0.0 583
MsG0380017422.01.T01 AT5G25370 49.185 675 190 15 33 563 59 724 0.0 581
MsG0380017422.01.T01 AT4G11830 36.928 677 264 17 41 563 137 804 1.81e-134 411
MsG0380017422.01.T01 AT4G11830 36.928 677 264 17 41 563 169 836 3.89e-134 412
MsG0380017422.01.T01 AT2G42010 37.240 674 261 18 41 563 401 1063 6.99e-131 409
MsG0380017422.01.T01 AT4G00240 36.176 680 272 17 35 563 87 755 1.29e-130 400
MsG0380017422.01.T01 AT4G00240 36.176 680 272 17 35 563 204 872 1.80e-129 400
MsG0380017422.01.T01 AT4G11840 36.858 681 260 18 41 563 178 846 5.11e-129 399
MsG0380017422.01.T01 AT4G00240 36.176 680 272 17 35 563 239 907 1.16e-128 399
MsG0380017422.01.T01 AT4G35790 38.426 648 231 14 76 563 197 836 1.69e-128 397
MsG0380017422.01.T01 AT2G42010 36.207 696 263 18 41 563 401 1088 7.03e-128 402
MsG0380017422.01.T01 AT4G11840 37.888 644 234 16 76 563 183 816 2.46e-127 393
MsG0380017422.01.T01 AT4G35790 37.785 659 231 14 76 563 197 847 7.25e-127 393
MsG0380017422.01.T01 AT4G11850 36.593 675 269 16 41 563 171 838 3.63e-126 391
MsG0380017422.01.T01 AT1G55180 36.071 621 236 16 66 554 120 711 1.25e-115 360
MsG0380017422.01.T01 AT1G55180 36.438 612 229 15 74 554 151 733 5.09e-115 359
MsG0380017422.01.T01 AT4G35790 35.318 487 155 10 76 402 197 683 2.00e-74 250
MsG0380017422.01.T01 AT4G11830 31.992 472 171 12 41 368 169 634 2.11e-62 217
MsG0380017422.01.T01 AT4G11830 34.223 412 151 10 41 338 169 574 1.09e-61 215
MsG0380017422.01.T01 AT3G05630 31.092 238 111 7 305 509 714 931 2.75e-18 89.7
MsG0380017422.01.T01 AT3G16785 33.505 194 79 6 302 464 756 930 1.92e-15 80.5
MsG0380017422.01.T01 AT3G16785 33.505 194 79 6 302 464 756 930 1.92e-15 80.5
MsG0380017422.01.T01 AT3G16785 33.505 194 79 6 302 464 756 930 2.08e-15 80.5
MsG0380017422.01.T01 AT3G16785 33.505 194 79 6 302 464 756 930 2.08e-15 80.5
MsG0380017422.01.T01 AT3G16785 33.505 194 79 6 302 464 756 930 2.38e-15 80.1
MsG0380017422.01.T01 AT3G16785 33.505 194 79 6 302 464 756 930 2.58e-15 80.1

Find 119 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTTTCTGTTGGCTTGTT+TGG 0.177927 3:+96115720 None:intergenic
TTTACGCATTCCACACTTTC+AGG 0.207301 3:+96113879 None:intergenic
CCAAATGAAGTTATTGAATT+AGG 0.215359 3:-96115002 MsG0380017422.01.T01:CDS
TTCCACCATCCATTGATCTT+TGG 0.219999 3:+96114051 None:intergenic
GTTGCAAGCTGGATGTAATT+TGG 0.224934 3:-96116814 MsG0380017422.01.T01:CDS
CAACCTATCAACTTCACTTA+TGG 0.246044 3:+96116833 None:intergenic
TACTTTCTGTTGGCTTGTTT+GGG 0.247108 3:+96115721 None:intergenic
GGAAGTGTGACATCACTTTC+AGG 0.249099 3:-96113747 MsG0380017422.01.T01:CDS
TAAAATACTCTGCAGTTTCT+TGG 0.255279 3:+96115574 None:intergenic
TTAATGTTCTTGTGCTTGTT+TGG 0.292615 3:-96115653 MsG0380017422.01.T01:CDS
ATACAGAAATAACCTTGATT+AGG 0.319930 3:-96115746 MsG0380017422.01.T01:intron
ATTCTATCAAGCTCTTGAAT+TGG 0.328163 3:+96115134 None:intergenic
AAGAACATTAACACCTTCAT+TGG 0.337331 3:+96115665 None:intergenic
CCTAATTCAATAACTTCATT+TGG 0.339645 3:+96115002 None:intergenic
TACAGAAATAACCTTGATTA+GGG 0.344363 3:-96115745 MsG0380017422.01.T01:intron
AGAATCAAAGCCATTGTATC+AGG 0.349603 3:+96113712 None:intergenic
CTTCAACAGGATACCGTAAA+AGG 0.350159 3:+96113781 None:intergenic
CGAACAGTTATCAGTTTCAT+AGG 0.359772 3:-96115406 MsG0380017422.01.T01:CDS
GATATTAAAGTTGAGGATAT+TGG 0.365230 3:-96114843 MsG0380017422.01.T01:intron
TTCTATCAAGCTCTTGAATT+GGG 0.378843 3:+96115135 None:intergenic
AGACCACAAGGTCAAGTATA+TGG 0.383000 3:-96113960 MsG0380017422.01.T01:CDS
CATCTTACCTATCATCATCT+TGG 0.386141 3:+96114462 None:intergenic
ACCTGAGAGTGCATCAGTTC+AGG 0.390624 3:-96114713 MsG0380017422.01.T01:CDS
CTGTCAGGCTCTGGTTGCTC+TGG 0.392079 3:+96114535 None:intergenic
CCATCTTCACCCACTTCAAC+AGG 0.395226 3:+96113768 None:intergenic
TAATGTTCTTGTGCTTGTTT+GGG 0.399896 3:-96115652 MsG0380017422.01.T01:CDS
ATTGAAAATCAGTATTTCCT+AGG 0.407400 3:-96114891 MsG0380017422.01.T01:CDS
CAGTTCAGGCAATATTAGAT+TGG 0.408091 3:-96114699 MsG0380017422.01.T01:CDS
ACCGTGTTGCTGAGAGGAAT+TGG 0.410354 3:-96113848 MsG0380017422.01.T01:CDS
CAGAAGAAGATGGCGAAACT+TGG 0.417133 3:-96115082 MsG0380017422.01.T01:CDS
CAAAAGACTATAGTTGTTGA+TGG 0.423538 3:-96115454 MsG0380017422.01.T01:intron
CTTGTTTGGGTCCCTAATCA+AGG 0.426022 3:+96115734 None:intergenic
GCATTATGGTATGAACATAT+TGG 0.427241 3:-96113927 MsG0380017422.01.T01:CDS
CAAGCTCTTGAATTGGGAAC+AGG 0.427300 3:+96115141 None:intergenic
ATGGCTTCAGGAGAGCATTA+TGG 0.435411 3:-96113941 MsG0380017422.01.T01:CDS
GATATTCACTGCAAGCTAGA+AGG 0.435535 3:-96115239 MsG0380017422.01.T01:CDS
GTTCATTCCAAGATGATGAT+AGG 0.436783 3:-96114469 MsG0380017422.01.T01:intron
TAACCATAAGTGAAGTTGAT+AGG 0.438118 3:-96116836 MsG0380017422.01.T01:CDS
GAATTGGGAACAGGAATTGT+TGG 0.442982 3:+96115150 None:intergenic
CATTGATCTTTGGTTTATGT+TGG 0.443067 3:+96114061 None:intergenic
TCCTAGGGAGTTCCTATGGT+TGG 0.446572 3:-96114875 MsG0380017422.01.T01:CDS
GCTGCTACATGGGACACTTA+AGG 0.452370 3:-96116859 MsG0380017422.01.T01:CDS
TTTCTTGAGTATTTCTCCTA+GGG 0.452951 3:+96115692 None:intergenic
TGCAATATTTCCTGATACAA+TGG 0.454054 3:-96113722 MsG0380017422.01.T01:CDS
TTGTGGTCTTTGTGAGCCAT+TGG 0.456429 3:+96113974 None:intergenic
GGACGACAGAACCTCTGTTC+CGG 0.460427 3:-96115631 MsG0380017422.01.T01:CDS
AAGGTCAAGTATATGGCTTC+AGG 0.460768 3:-96113953 MsG0380017422.01.T01:CDS
CAGTTGTTTAGATCCATTGA+TGG 0.464754 3:-96115053 MsG0380017422.01.T01:CDS
CCCAGGTGCTCTATTAAGAA+AGG 0.468015 3:-96115284 MsG0380017422.01.T01:intron
TAACTTCATTTGGTGCTTGA+GGG 0.468911 3:+96115012 None:intergenic
AAAATGCCTCAGCTGCTACA+TGG 0.472016 3:-96116870 MsG0380017422.01.T01:CDS
ATAACTTCATTTGGTGCTTG+AGG 0.473405 3:+96115011 None:intergenic
AGAAACAGCACCACCATCAA+TGG 0.474765 3:+96115040 None:intergenic
CCTGTTGAAGTGGGTGAAGA+TGG 0.476067 3:-96113768 MsG0380017422.01.T01:CDS
AAAAGGGAGAGTAAGAAAGA+TGG 0.477240 3:-96114571 MsG0380017422.01.T01:CDS
GCCTGAACTGATGCACTCTC+AGG 0.477938 3:+96114712 None:intergenic
TATTTCCTAGGGAGTTCCTA+TGG 0.478923 3:-96114879 MsG0380017422.01.T01:CDS
TTTGCGATCCTTCAACATGA+TGG 0.480827 3:+96115431 None:intergenic
TGATAATCACTGTCAGGCTC+TGG 0.481330 3:+96114526 None:intergenic
TCTTTGTGAGCCATTGGATG+TGG 0.483037 3:+96113980 None:intergenic
ATTGAATTAGGCCTTGTTAG+TGG 0.484468 3:-96114990 MsG0380017422.01.T01:CDS
GAAGATCATCGTCCTGTACC+AGG 0.485983 3:-96116057 MsG0380017422.01.T01:CDS
CAATATTAGATTGGCAAAGA+AGG 0.486949 3:-96114690 MsG0380017422.01.T01:CDS
TCAGGCTCTGGTTGCTCTGG+AGG 0.487804 3:+96114538 None:intergenic
TACAACACATCCCATGCAAT+AGG 0.493852 3:+96115215 None:intergenic
AGAGGTGGGAAAAGCAAGTC+GGG 0.494783 3:-96115181 MsG0380017422.01.T01:CDS
AGGGTGATACTACTTTCTGT+TGG 0.495579 3:+96115711 None:intergenic
TCTTCGTATAGCATTTATGT+AGG 0.504718 3:+96114932 None:intergenic
GCTCTATGATAATCACTGTC+AGG 0.504896 3:+96114520 None:intergenic
ATATCATGCCACGGTTCTCT+AGG 0.506247 3:+96115257 None:intergenic
TTTACGGTATCCTGTTGAAG+TGG 0.514342 3:-96113778 MsG0380017422.01.T01:CDS
AAACCGTCTTTCTTAAAAGC+CGG 0.515049 3:+96115612 None:intergenic
TTCAACTGATATTAAAGTTG+AGG 0.520279 3:-96114850 MsG0380017422.01.T01:CDS
TTGAAAATCAGTATTTCCTA+GGG 0.521701 3:-96114890 MsG0380017422.01.T01:CDS
TAATTTGGATTTCTGTCGAA+AGG 0.523952 3:-96116799 MsG0380017422.01.T01:intron
AAATGCCTCAGCTGCTACAT+GGG 0.524555 3:-96116869 MsG0380017422.01.T01:CDS
CAACATAAACCAAAGATCAA+TGG 0.528894 3:-96114060 MsG0380017422.01.T01:CDS
TTTAAGAAAGACGGTTTGAT+GGG 0.532749 3:-96115606 MsG0380017422.01.T01:CDS
TTGAGGATAGAAAATGTCTA+TGG 0.533093 3:-96115993 MsG0380017422.01.T01:CDS
AGAAAATGTCTATGGTCTCA+AGG 0.538595 3:-96115985 MsG0380017422.01.T01:CDS
TCTGATAACATTGCATCAGA+AGG 0.542244 3:+96115101 None:intergenic
AGCTAGAAGGACCTATTGCA+TGG 0.543044 3:-96115226 MsG0380017422.01.T01:CDS
GAAGTGTGACATCACTTTCA+GGG 0.551309 3:-96113746 MsG0380017422.01.T01:CDS
TTCGATCAGAGACAAGGTTG+TGG 0.553785 3:-96115925 MsG0380017422.01.T01:CDS
GTTGATGGCCATCATGTTGA+AGG 0.554676 3:-96115439 MsG0380017422.01.T01:CDS
AGAGACACAGAGATTGCAAT+GGG 0.562687 3:-96114029 MsG0380017422.01.T01:CDS
ATAACATTGCATCAGAAGGA+TGG 0.563136 3:+96115105 None:intergenic
GATGATGAATACATAGTGAT+TGG 0.566916 3:-96114089 MsG0380017422.01.T01:CDS
TTACGGTATCCTGTTGAAGT+GGG 0.569394 3:-96113777 MsG0380017422.01.T01:CDS
GCAATTCTCTAGTGTCATTG+AGG 0.571602 3:-96116010 MsG0380017422.01.T01:CDS
CTCAGTATACATCATCTCCA+TGG 0.584166 3:+96114666 None:intergenic
TGTCAGGGACATGAGCGTCT+TGG 0.584673 3:+96115890 None:intergenic
CATCTAGCATCCACATCCAA+TGG 0.592837 3:-96113990 MsG0380017422.01.T01:CDS
GCCAACCATAGGAACTCCCT+AGG 0.597582 3:+96114874 None:intergenic
TCCAATTCCTCTCAGCAACA+CGG 0.598333 3:+96113847 None:intergenic
GAAGTTGATAGGTTGCAAGC+TGG 0.598778 3:-96116825 MsG0380017422.01.T01:CDS
TTGTTTAGATCCATTGATGG+TGG 0.610089 3:-96115050 MsG0380017422.01.T01:CDS
ATCAGTTGAATGCCAACCAT+AGG 0.610416 3:+96114863 None:intergenic
AACCAAAGATCAATGGATGG+TGG 0.611885 3:-96114053 MsG0380017422.01.T01:CDS
CAGAGGTGGGAAAAGCAAGT+CGG 0.616576 3:-96115182 MsG0380017422.01.T01:CDS
ACAGAAAGTAGTATCACCCT+AGG 0.623457 3:-96115708 MsG0380017422.01.T01:CDS
AGTGTCCCATGTAGCAGCTG+AGG 0.627470 3:+96116864 None:intergenic
GCTAGAAGGACCTATTGCAT+GGG 0.631026 3:-96115225 MsG0380017422.01.T01:CDS
ACAGTTATCAGTTTCATAGG+TGG 0.633175 3:-96115403 MsG0380017422.01.T01:CDS
ATAAACCAAAGATCAATGGA+TGG 0.633380 3:-96114056 MsG0380017422.01.T01:CDS
AAGCCATATACTTGACCTTG+TGG 0.641516 3:+96113957 None:intergenic
AGGTGCTCTATTAAGAAAGG+TGG 0.641999 3:-96115281 MsG0380017422.01.T01:CDS
TTTCTTAAAAGCCGGAACAG+AGG 0.644428 3:+96115620 None:intergenic
GCAATGTTATCAGAAGAAGA+TGG 0.655613 3:-96115092 MsG0380017422.01.T01:CDS
AAGAGACACAGAGATTGCAA+TGG 0.659014 3:-96114030 MsG0380017422.01.T01:CDS
TTGCAGTGAATATCATGCCA+CGG 0.660624 3:+96115248 None:intergenic
AGATTGGCAAAGAAGGACCA+TGG 0.665799 3:-96114683 MsG0380017422.01.T01:CDS
GATGTGGATGCTAGATGATG+AGG 0.676901 3:+96113996 None:intergenic
TAAAATGTCAAATAATCACG+AGG 0.677762 3:+96114604 None:intergenic
AAAATGTCAAATAATCACGA+GGG 0.681608 3:+96114605 None:intergenic
TCCATGGATGAACACTGTCA+GGG 0.688183 3:+96115875 None:intergenic
AATGGCTCACAAAGACCACA+AGG 0.712737 3:-96113972 MsG0380017422.01.T01:CDS
GATCATCGTCCTGTACCAGG+CGG 0.755483 3:-96116054 MsG0380017422.01.T01:CDS
AAGGTGGTCCTAGAGAACCG+TGG 0.794041 3:-96115265 MsG0380017422.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGATTTATTTGAATGTT+TGG + Chr3:96116193-96116212 None:intergenic 15.0%
!! CATATAAGCTATTATATTAT+AGG + Chr3:96116156-96116175 None:intergenic 15.0%
!! TTGAAGTTTAAATTCATAAA+TGG - Chr3:96113869-96113888 MsG0380017422.01.T01:CDS 15.0%
!!! ACATTCAAATAAATCTTTTT+AGG - Chr3:96116194-96116213 MsG0380017422.01.T01:intron 15.0%
!! AAATGGCAAAATATATTATG+CGG - Chr3:96113886-96113905 MsG0380017422.01.T01:CDS 20.0%
!! AATGAAAAATCATGATAGTT+AGG + Chr3:96116352-96116371 None:intergenic 20.0%
!! AATTTGTGTATTCAATGAAT+TGG - Chr3:96113976-96113995 MsG0380017422.01.T01:CDS 20.0%
!! ATAAAGTAAACAATCAATGT+TGG + Chr3:96116459-96116478 None:intergenic 20.0%
!! ATAATATTTGTTCCAGATAT+TGG + Chr3:96114736-96114755 None:intergenic 20.0%
!! CAAACCTAGAAAATATATAT+TGG - Chr3:96116385-96116404 MsG0380017422.01.T01:intron 20.0%
!! CACTTTAATTATTAAAACAC+TGG + Chr3:96113830-96113849 None:intergenic 20.0%
!!! AGAGTATTTTAAAAACACAA+AGG - Chr3:96115021-96115040 MsG0380017422.01.T01:CDS 20.0%
!!! ATTTTATTGTCTTGGTAAAA+GGG - Chr3:96115996-96116015 MsG0380017422.01.T01:CDS 20.0%
!!! TAAAGTCTTTTTTACATAAC+TGG - Chr3:96114803-96114822 MsG0380017422.01.T01:intron 20.0%
!!! TATGCCAATATATATTTTCT+AGG + Chr3:96116392-96116411 None:intergenic 20.0%
!!! TATTTGACATTTTATTGTCT+TGG - Chr3:96115988-96116007 MsG0380017422.01.T01:CDS 20.0%
!!! TATTTTCTAGGTTTGAATAT+AGG + Chr3:96116380-96116399 None:intergenic 20.0%
!!! TTCAAATAAATCTTTTTAGG+TGG - Chr3:96116197-96116216 MsG0380017422.01.T01:intron 20.0%
!!! TTCAACATTCTTCTTTTTTA+TGG + Chr3:96115953-96115972 None:intergenic 20.0%
! AAAAATCATGATAGTTAGGT+AGG + Chr3:96116348-96116367 None:intergenic 25.0%
! AAAATGTCAAATAATCACGA+GGG + Chr3:96115981-96116000 None:intergenic 25.0%
! AAAGACTTTAGCATTCATAA+TGG + Chr3:96114793-96114812 None:intergenic 25.0%
! ATACAAATGGTAGAAAAGTT+TGG + Chr3:96114182-96114201 None:intergenic 25.0%
! ATACAGAAATAACCTTGATT+AGG - Chr3:96114837-96114856 MsG0380017422.01.T01:intron 25.0%
! ATTGAAAATCAGTATTTCCT+AGG - Chr3:96115692-96115711 MsG0380017422.01.T01:CDS 25.0%
! CAAAATATATTATGCGGTAT+TGG - Chr3:96113892-96113911 MsG0380017422.01.T01:CDS 25.0%
! CCAAATGAAGTTATTGAATT+AGG - Chr3:96115581-96115600 MsG0380017422.01.T01:CDS 25.0%
! CCTAATTCAATAACTTCATT+TGG + Chr3:96115584-96115603 None:intergenic 25.0%
! GATATTAAAGTTGAGGATAT+TGG - Chr3:96115740-96115759 MsG0380017422.01.T01:CDS 25.0%
! GTCAAATATTGTGGAATAAA+GGG - Chr3:96114079-96114098 MsG0380017422.01.T01:CDS 25.0%
! TAAAATGTCAAATAATCACG+AGG + Chr3:96115982-96116001 None:intergenic 25.0%
! TACAGAAATAACCTTGATTA+GGG - Chr3:96114838-96114857 MsG0380017422.01.T01:intron 25.0%
! TGTCAAATATTGTGGAATAA+AGG - Chr3:96114078-96114097 MsG0380017422.01.T01:CDS 25.0%
! TTCAACTGATATTAAAGTTG+AGG - Chr3:96115733-96115752 MsG0380017422.01.T01:CDS 25.0%
! TTGAAAATCAGTATTTCCTA+GGG - Chr3:96115693-96115712 MsG0380017422.01.T01:CDS 25.0%
!! ACATGAAAAGCATATACAAA+TGG + Chr3:96114195-96114214 None:intergenic 25.0%
!! AGTTGATTTAGATAAAGCAA+GGG - Chr3:96114294-96114313 MsG0380017422.01.T01:intron 25.0%
!! CATTTTATTGTCTTGGTAAA+AGG - Chr3:96115995-96116014 MsG0380017422.01.T01:CDS 25.0%
!! GTGTTTCATATGGTTTTTAT+TGG - Chr3:96116236-96116255 MsG0380017422.01.T01:intron 25.0%
!! TTTTCTTCTGTCAAATATTG+TGG - Chr3:96114070-96114089 MsG0380017422.01.T01:CDS 25.0%
AAGAACATTAACACCTTCAT+TGG + Chr3:96114921-96114940 None:intergenic 30.0%
AAGCTCATTAATTTAATCCG+TGG - Chr3:96114038-96114057 MsG0380017422.01.T01:CDS 30.0%
ATAAACCAAAGATCAATGGA+TGG - Chr3:96116527-96116546 MsG0380017422.01.T01:intron 30.0%
ATGAGCACAATAGATTTCAA+AGG + Chr3:96114372-96114391 None:intergenic 30.0%
ATTCTATCAAGCTCTTGAAT+TGG + Chr3:96115452-96115471 None:intergenic 30.0%
ATTGTTAGCAAAATTGAAGC+TGG - Chr3:96115800-96115819 MsG0380017422.01.T01:intron 30.0%
ATTTAGTCCAATCTTCTTAC+GGG + Chr3:96116311-96116330 None:intergenic 30.0%
CAAAAGACTATAGTTGTTGA+TGG - Chr3:96115129-96115148 MsG0380017422.01.T01:CDS 30.0%
CAACATAAACCAAAGATCAA+TGG - Chr3:96116523-96116542 MsG0380017422.01.T01:intron 30.0%
CAATATTAGATTGGCAAAGA+AGG - Chr3:96115893-96115912 MsG0380017422.01.T01:CDS 30.0%
CATTTAGTCCAATCTTCTTA+CGG + Chr3:96116312-96116331 None:intergenic 30.0%
GAAACTCTAACAACTATCAA+TGG - Chr3:96116280-96116299 MsG0380017422.01.T01:intron 30.0%
GAAGAAAAAATATAGTGCCA+CGG + Chr3:96114058-96114077 None:intergenic 30.0%
GATGATGAATACATAGTGAT+TGG - Chr3:96116494-96116513 MsG0380017422.01.T01:intron 30.0%
GCATTATGGTATGAACATAT+TGG - Chr3:96116656-96116675 MsG0380017422.01.T01:intron 30.0%
GTCAAAGATGATAATCCAAT+TGG - Chr3:96114416-96114435 MsG0380017422.01.T01:intron 30.0%
GTGTTCAAAGTTGAAAACAA+AGG + Chr3:96115246-96115265 None:intergenic 30.0%
TAAAATACTCTGCAGTTTCT+TGG + Chr3:96115012-96115031 None:intergenic 30.0%
TAATGTTCTTGTGCTTGTTT+GGG - Chr3:96114931-96114950 MsG0380017422.01.T01:CDS 30.0%
TAATTTGGATTTCTGTCGAA+AGG - Chr3:96113784-96113803 MsG0380017422.01.T01:CDS 30.0%
TCTTCGTATAGCATTTATGT+AGG + Chr3:96115654-96115673 None:intergenic 30.0%
TGAATGTTTGGACTTTGTAA+AGG + Chr3:96116181-96116200 None:intergenic 30.0%
TGATGGAAGATATGATACAA+TGG - Chr3:96115215-96115234 MsG0380017422.01.T01:CDS 30.0%
TGCAATATTTCCTGATACAA+TGG - Chr3:96116861-96116880 MsG0380017422.01.T01:CDS 30.0%
TGGAACAAATATTATGTACC+TGG - Chr3:96114741-96114760 MsG0380017422.01.T01:intron 30.0%
TTAATGTTCTTGTGCTTGTT+TGG - Chr3:96114930-96114949 MsG0380017422.01.T01:CDS 30.0%
TTCTATCAAGCTCTTGAATT+GGG + Chr3:96115451-96115470 None:intergenic 30.0%
TTGAGGATAGAAAATGTCTA+TGG - Chr3:96114590-96114609 MsG0380017422.01.T01:CDS 30.0%
TTTAAGAAAGACGGTTTGAT+GGG - Chr3:96114977-96114996 MsG0380017422.01.T01:CDS 30.0%
TTTCTTGAGTATTTCTCCTA+GGG + Chr3:96114894-96114913 None:intergenic 30.0%
! CAGTTGATTTAGATAAAGCA+AGG - Chr3:96114293-96114312 MsG0380017422.01.T01:intron 30.0%
! CATCAACAACTATAGTCTTT+TGG + Chr3:96115131-96115150 None:intergenic 30.0%
! CATTGATCTTTGGTTTATGT+TGG + Chr3:96116525-96116544 None:intergenic 30.0%
! GTGTAAATACTCACCTTTTA+CGG - Chr3:96116789-96116808 MsG0380017422.01.T01:intron 30.0%
! GTTGATGAAAATCATCATGA+TGG + Chr3:96115272-96115291 None:intergenic 30.0%
! TAACCATAAGTGAAGTTGAT+AGG - Chr3:96113747-96113766 MsG0380017422.01.T01:CDS 30.0%
! TTTTCTTGAGTATTTCTCCT+AGG + Chr3:96114895-96114914 None:intergenic 30.0%
!! AAGTCTTTAAAAAGTGTCAC+AGG + Chr3:96113936-96113955 None:intergenic 30.0%
!! TTTTAAGAAAGACGGTTTGA+TGG - Chr3:96114976-96114995 MsG0380017422.01.T01:CDS 30.0%
!!! ACTTTATTTTGTTCCTGTAG+TGG - Chr3:96116472-96116491 MsG0380017422.01.T01:intron 30.0%
!!! ATCTTTTTAGGTGGTTTCTA+AGG - Chr3:96116206-96116225 MsG0380017422.01.T01:intron 30.0%
!!! GTCTTTTTTACATAACTGGT+TGG - Chr3:96114807-96114826 MsG0380017422.01.T01:intron 30.0%
AAAAGGGAGAGTAAGAAAGA+TGG - Chr3:96116012-96116031 MsG0380017422.01.T01:CDS 35.0%
AAACCGTCTTTCTTAAAAGC+CGG + Chr3:96114974-96114993 None:intergenic 35.0%
AAGGACCTATAATTGACAGA+TGG - Chr3:96114486-96114505 MsG0380017422.01.T01:CDS 35.0%
AATAAAGGGAACAACACACA+AGG - Chr3:96114093-96114112 MsG0380017422.01.T01:CDS 35.0%
ACAGTTATCAGTTTCATAGG+TGG - Chr3:96115180-96115199 MsG0380017422.01.T01:CDS 35.0%
AGAAAATGTCTATGGTCTCA+AGG - Chr3:96114598-96114617 MsG0380017422.01.T01:CDS 35.0%
AGGACCTATAATTGACAGAT+GGG - Chr3:96114487-96114506 MsG0380017422.01.T01:CDS 35.0%
ATAAAGGGAACAACACACAA+GGG - Chr3:96114094-96114113 MsG0380017422.01.T01:CDS 35.0%
ATAACATTGCATCAGAAGGA+TGG + Chr3:96115481-96115500 None:intergenic 35.0%
ATCTTCAATGACAACTCCTT+TGG + Chr3:96115782-96115801 None:intergenic 35.0%
ATGTATTCATCATCCACTAC+AGG + Chr3:96116488-96116507 None:intergenic 35.0%
ATTATGTACCTGGAAGATGT+TGG - Chr3:96114751-96114770 MsG0380017422.01.T01:intron 35.0%
CAACCTATCAACTTCACTTA+TGG + Chr3:96113753-96113772 None:intergenic 35.0%
CACTTGTGATGAAGATTGTT+GGG - Chr3:96114254-96114273 MsG0380017422.01.T01:intron 35.0%
CAGTTCAGGCAATATTAGAT+TGG - Chr3:96115884-96115903 MsG0380017422.01.T01:intron 35.0%
CAGTTGTTTAGATCCATTGA+TGG - Chr3:96115530-96115549 MsG0380017422.01.T01:intron 35.0%
CATCTTACCTATCATCATCT+TGG + Chr3:96116124-96116143 None:intergenic 35.0%
CGAACAGTTATCAGTTTCAT+AGG - Chr3:96115177-96115196 MsG0380017422.01.T01:CDS 35.0%
CTCAAGAAAAAAGCCAATGA+AGG - Chr3:96114905-96114924 MsG0380017422.01.T01:CDS 35.0%
GATTTAGATAAAGCAAGGGT+TGG - Chr3:96114298-96114317 MsG0380017422.01.T01:intron 35.0%
GCAATGTTATCAGAAGAAGA+TGG - Chr3:96115491-96115510 MsG0380017422.01.T01:intron 35.0%
GTTCATTCCAAGATGATGAT+AGG - Chr3:96116114-96116133 MsG0380017422.01.T01:intron 35.0%
TCAAAGGTCTCATTCCATTT+CGG + Chr3:96114356-96114375 None:intergenic 35.0%
TCTGATAACATTGCATCAGA+AGG + Chr3:96115485-96115504 None:intergenic 35.0%
TTATGTACCTGGAAGATGTT+GGG - Chr3:96114752-96114771 MsG0380017422.01.T01:intron 35.0%
TTGGTTAAATTGTGTACCTC+AGG + Chr3:96114163-96114182 None:intergenic 35.0%
TTGTTTAGATCCATTGATGG+TGG - Chr3:96115533-96115552 MsG0380017422.01.T01:intron 35.0%
TTTCATCAACCAAATTTCCC+AGG - Chr3:96115282-96115301 MsG0380017422.01.T01:CDS 35.0%
! TGTTGTACAATTTTGAGCAG+AGG - Chr3:96115384-96115403 MsG0380017422.01.T01:intron 35.0%
! TGTTGTCTTTTCCACTAACA+AGG + Chr3:96115607-96115626 None:intergenic 35.0%
!! ACATTTTTCGATCAGAGACA+AGG - Chr3:96114652-96114671 MsG0380017422.01.T01:CDS 35.0%
!! AGGTCCTTTGAGAATTTTCT+CGG + Chr3:96114474-96114493 None:intergenic 35.0%
!! ATAACTTCATTTGGTGCTTG+AGG + Chr3:96115575-96115594 None:intergenic 35.0%
!! ATTGAATTAGGCCTTGTTAG+TGG - Chr3:96115593-96115612 MsG0380017422.01.T01:CDS 35.0%
!! CTTTGAGAATTTTCTCGGAA+GGG + Chr3:96114469-96114488 None:intergenic 35.0%
!! TAACTTCATTTGGTGCTTGA+GGG + Chr3:96115574-96115593 None:intergenic 35.0%
!! TACTTTCTGTTGGCTTGTTT+GGG + Chr3:96114865-96114884 None:intergenic 35.0%
!!! AGGAATACACATGCCATTTT+TGG - Chr3:96114618-96114637 MsG0380017422.01.T01:CDS 35.0%
!!! GGAATACACATGCCATTTTT+GGG - Chr3:96114619-96114638 MsG0380017422.01.T01:CDS 35.0%
!!! TTTTAGGTGGTTTCTAAGGT+GGG - Chr3:96116210-96116229 MsG0380017422.01.T01:intron 35.0%
!!! TTTTTAGGTGGTTTCTAAGG+TGG - Chr3:96116209-96116228 MsG0380017422.01.T01:intron 35.0%
AACCAAAGATCAATGGATGG+TGG - Chr3:96116530-96116549 MsG0380017422.01.T01:intron 40.0%
AAGAGACACAGAGATTGCAA+TGG - Chr3:96116553-96116572 MsG0380017422.01.T01:intron 40.0%
AAGCCATATACTTGACCTTG+TGG + Chr3:96116629-96116648 None:intergenic 40.0%
AAGGTCAAGTATATGGCTTC+AGG - Chr3:96116630-96116649 MsG0380017422.01.T01:intron 40.0%
ACAAGATACAACCCTTGACT+TGG + Chr3:96114135-96114154 None:intergenic 40.0%
ACAGAAAGTAGTATCACCCT+AGG - Chr3:96114875-96114894 MsG0380017422.01.T01:CDS 40.0%
AGACCACAAGGTCAAGTATA+TGG - Chr3:96116623-96116642 MsG0380017422.01.T01:intron 40.0%
AGAGACACAGAGATTGCAAT+GGG - Chr3:96116554-96116573 MsG0380017422.01.T01:intron 40.0%
AGGGTGATACTACTTTCTGT+TGG + Chr3:96114875-96114894 None:intergenic 40.0%
AGGTGCTCTATTAAGAAAGG+TGG - Chr3:96115302-96115321 MsG0380017422.01.T01:intron 40.0%
ATATCTTCCCAACATCTTCC+AGG + Chr3:96114762-96114781 None:intergenic 40.0%
ATCAGTTGAATGCCAACCAT+AGG + Chr3:96115723-96115742 None:intergenic 40.0%
CAAGATACAACCCTTGACTT+GGG + Chr3:96114134-96114153 None:intergenic 40.0%
CATCCATGGATACCAATATC+TGG - Chr3:96114721-96114740 MsG0380017422.01.T01:CDS 40.0%
CCAACAATCTTCATCACAAG+TGG + Chr3:96114256-96114275 None:intergenic 40.0%
CCAATTGGTGCAACTCTAAT+CGG - Chr3:96114431-96114450 MsG0380017422.01.T01:intron 40.0%
CCACTTGTGATGAAGATTGT+TGG - Chr3:96114253-96114272 MsG0380017422.01.T01:intron 40.0%
CCTTCCGAGAAAATTCTCAA+AGG - Chr3:96114467-96114486 MsG0380017422.01.T01:intron 40.0%
CTCACCCATCTGTCAATTAT+AGG + Chr3:96114494-96114513 None:intergenic 40.0%
CTCAGTATACATCATCTCCA+TGG + Chr3:96115920-96115939 None:intergenic 40.0%
CTTCAACAGGATACCGTAAA+AGG + Chr3:96116805-96116824 None:intergenic 40.0%
GAAGTGTGACATCACTTTCA+GGG - Chr3:96116837-96116856 MsG0380017422.01.T01:CDS 40.0%
GAATCAACCTCAAACCGAAA+TGG - Chr3:96114339-96114358 MsG0380017422.01.T01:intron 40.0%
GAATTGGGAACAGGAATTGT+TGG + Chr3:96115436-96115455 None:intergenic 40.0%
GATATTCACTGCAAGCTAGA+AGG - Chr3:96115344-96115363 MsG0380017422.01.T01:intron 40.0%
GCTCTATGATAATCACTGTC+AGG + Chr3:96116066-96116085 None:intergenic 40.0%
GTTCCAGATATTGGTATCCA+TGG + Chr3:96114727-96114746 None:intergenic 40.0%
GTTGCAAGCTGGATGTAATT+TGG - Chr3:96113769-96113788 MsG0380017422.01.T01:CDS 40.0%
TAAAGGGAACAACACACAAG+GGG - Chr3:96114095-96114114 MsG0380017422.01.T01:intron 40.0%
TACAACACATCCCATGCAAT+AGG + Chr3:96115371-96115390 None:intergenic 40.0%
TATTTCCTAGGGAGTTCCTA+TGG - Chr3:96115704-96115723 MsG0380017422.01.T01:CDS 40.0%
TGCATTGCATCTCATACCAA+AGG - Chr3:96115763-96115782 MsG0380017422.01.T01:intron 40.0%
TGTATGTGGTGATTCCAATG+TGG - Chr3:96115836-96115855 MsG0380017422.01.T01:intron 40.0%
TTAAATTGTGTACCTCAGGC+CGG + Chr3:96114159-96114178 None:intergenic 40.0%
TTACGGTATCCTGTTGAAGT+GGG - Chr3:96116806-96116825 MsG0380017422.01.T01:CDS 40.0%
TTCCACCATCCATTGATCTT+TGG + Chr3:96116535-96116554 None:intergenic 40.0%
TTGCAGTGAATATCATGCCA+CGG + Chr3:96115338-96115357 None:intergenic 40.0%
TTGGACGAACCAGAATGATA+GGG - Chr3:96114317-96114336 MsG0380017422.01.T01:intron 40.0%
TTTACGCATTCCACACTTTC+AGG + Chr3:96116707-96116726 None:intergenic 40.0%
TTTACGGTATCCTGTTGAAG+TGG - Chr3:96116805-96116824 MsG0380017422.01.T01:CDS 40.0%
TTTCTTAAAAGCCGGAACAG+AGG + Chr3:96114966-96114985 None:intergenic 40.0%
TTTGCGATCCTTCAACATGA+TGG + Chr3:96115155-96115174 None:intergenic 40.0%
! AATAGAGCACCTGGGAAATT+TGG + Chr3:96115294-96115313 None:intergenic 40.0%
! ACCTTTCTTAATAGAGCACC+TGG + Chr3:96115303-96115322 None:intergenic 40.0%
! AGGTTGATTCCCTATCATTC+TGG + Chr3:96114329-96114348 None:intergenic 40.0%
! CCTTTCTTAATAGAGCACCT+GGG + Chr3:96115302-96115321 None:intergenic 40.0%
! GCAATTCTCTAGTGTCATTG+AGG - Chr3:96114573-96114592 MsG0380017422.01.T01:CDS 40.0%
! GTACAATTTTGAGCAGAGGT+GGG - Chr3:96115388-96115407 MsG0380017422.01.T01:intron 40.0%
! TCTCATTCCATTTCGGTTTG+AGG + Chr3:96114349-96114368 None:intergenic 40.0%
! TGTACAATTTTGAGCAGAGG+TGG - Chr3:96115387-96115406 MsG0380017422.01.T01:intron 40.0%
!! AGATTTCTAGCCCAAGTCAA+GGG - Chr3:96114121-96114140 MsG0380017422.01.T01:intron 40.0%
!! CCTTTGAGAATTTTCTCGGA+AGG + Chr3:96114470-96114489 None:intergenic 40.0%
!! CTACTTTCTGTTGGCTTGTT+TGG + Chr3:96114866-96114885 None:intergenic 40.0%
!! GTTCCGGCTTTTAAGAAAGA+CGG - Chr3:96114968-96114987 MsG0380017422.01.T01:CDS 40.0%
!! TTTAGGTGGTTTCTAAGGTG+GGG - Chr3:96116211-96116230 MsG0380017422.01.T01:intron 40.0%
!!! ACTATGCTTTTTCCACCATC+AGG + Chr3:96115073-96115092 None:intergenic 40.0%
!!! CTATGCTTTTTCCACCATCA+GGG + Chr3:96115072-96115091 None:intergenic 40.0%
AATGGCTCACAAAGACCACA+AGG - Chr3:96116611-96116630 MsG0380017422.01.T01:intron 45.0%
AGAAACAGCACCACCATCAA+TGG + Chr3:96115546-96115565 None:intergenic 45.0%
AGATTGGCAAAGAAGGACCA+TGG - Chr3:96115900-96115919 MsG0380017422.01.T01:CDS 45.0%
AGCTAGAAGGACCTATTGCA+TGG - Chr3:96115357-96115376 MsG0380017422.01.T01:intron 45.0%
ATATCATGCCACGGTTCTCT+AGG + Chr3:96115329-96115348 None:intergenic 45.0%
ATCCATGGATGAACACTGTC+AGG + Chr3:96114712-96114731 None:intergenic 45.0%
CAAGCTCTTGAATTGGGAAC+AGG + Chr3:96115445-96115464 None:intergenic 45.0%
CAGAAGAAGATGGCGAAACT+TGG - Chr3:96115501-96115520 MsG0380017422.01.T01:intron 45.0%
CATCTAGCATCCACATCCAA+TGG - Chr3:96116593-96116612 MsG0380017422.01.T01:intron 45.0%
CCCAGGTGCTCTATTAAGAA+AGG - Chr3:96115299-96115318 MsG0380017422.01.T01:intron 45.0%
CCGATTAGAGTTGCACCAAT+TGG + Chr3:96114434-96114453 None:intergenic 45.0%
CTTGTTTGGGTCCCTAATCA+AGG + Chr3:96114852-96114871 None:intergenic 45.0%
GAGAGAGGTTGTTGTGTATG+TGG - Chr3:96115822-96115841 MsG0380017422.01.T01:intron 45.0%
GATGTGGATGCTAGATGATG+AGG + Chr3:96116590-96116609 None:intergenic 45.0%
GCAAAATTGAAGCTGGAGAG+AGG - Chr3:96115807-96115826 MsG0380017422.01.T01:intron 45.0%
GCTAGAAGGACCTATTGCAT+GGG - Chr3:96115358-96115377 MsG0380017422.01.T01:intron 45.0%
GGCATTTCCCGTAAGAAGAT+TGG - Chr3:96116301-96116320 MsG0380017422.01.T01:intron 45.0%
GTACGCTGAACTCCCAAAAA+TGG + Chr3:96114634-96114653 None:intergenic 45.0%
GTTGGACGAACCAGAATGAT+AGG - Chr3:96114316-96114335 MsG0380017422.01.T01:intron 45.0%
TCAAGGGTTGTATCTTGTGC+CGG - Chr3:96114137-96114156 MsG0380017422.01.T01:intron 45.0%
TCCAATTCCTCTCAGCAACA+CGG + Chr3:96116739-96116758 None:intergenic 45.0%
TCCATGGATGAACACTGTCA+GGG + Chr3:96114711-96114730 None:intergenic 45.0%
TCTTTGTGAGCCATTGGATG+TGG + Chr3:96116606-96116625 None:intergenic 45.0%
TGATAATCACTGTCAGGCTC+TGG + Chr3:96116060-96116079 None:intergenic 45.0%
TTCGATCAGAGACAAGGTTG+TGG - Chr3:96114658-96114677 MsG0380017422.01.T01:CDS 45.0%
TTGTGGTCTTTGTGAGCCAT+TGG + Chr3:96116612-96116631 None:intergenic 45.0%
! GGAAGTGTGACATCACTTTC+AGG - Chr3:96116836-96116855 MsG0380017422.01.T01:CDS 45.0%
! TTTTGACGAGCCTGAAAGTG+TGG - Chr3:96116694-96116713 MsG0380017422.01.T01:intron 45.0%
!! ATGGCTTCAGGAGAGCATTA+TGG - Chr3:96116642-96116661 MsG0380017422.01.T01:intron 45.0%
!! GAAGTTGATAGGTTGCAAGC+TGG - Chr3:96113758-96113777 MsG0380017422.01.T01:CDS 45.0%
!! GAGATTTCTAGCCCAAGTCA+AGG - Chr3:96114120-96114139 MsG0380017422.01.T01:intron 45.0%
!! GGTGGTATTGATCTGTGTGA+TGG - Chr3:96115198-96115217 MsG0380017422.01.T01:CDS 45.0%
!! GTTGATGGCCATCATGTTGA+AGG - Chr3:96115144-96115163 MsG0380017422.01.T01:CDS 45.0%
!! TTAGGTGGTTTCTAAGGTGG+GGG - Chr3:96116212-96116231 MsG0380017422.01.T01:intron 45.0%
!! TTTTGAACCGTGTTGCTGAG+AGG - Chr3:96116729-96116748 MsG0380017422.01.T01:intron 45.0%
!!! ACACGAATTTTAGAACCGCC+TGG + Chr3:96114547-96114566 None:intergenic 45.0%
!!! ATTTTAGAACCGCCTGGTAC+AGG + Chr3:96114541-96114560 None:intergenic 45.0%
AGAGGTGGGAAAAGCAAGTC+GGG - Chr3:96115402-96115421 MsG0380017422.01.T01:CDS 50.0%
CAGAGGTGGGAAAAGCAAGT+CGG - Chr3:96115401-96115420 MsG0380017422.01.T01:CDS 50.0%
CCATCTTCACCCACTTCAAC+AGG + Chr3:96116818-96116837 None:intergenic 50.0%
CCTGTTGAAGTGGGTGAAGA+TGG - Chr3:96116815-96116834 MsG0380017422.01.T01:CDS 50.0%
GAAGATCATCGTCCTGTACC+AGG - Chr3:96114526-96114545 MsG0380017422.01.T01:CDS 50.0%
GCACTCTCAGGTATACCTTC+TGG + Chr3:96115862-96115881 None:intergenic 50.0%
GCTGCTACATGGGACACTTA+AGG - Chr3:96113724-96113743 MsG0380017422.01.T01:CDS 50.0%
GGTATACCTTCTGGCCACAT+TGG + Chr3:96115853-96115872 None:intergenic 50.0%
GTGATTCCAATGTGGCCAGA+AGG - Chr3:96115844-96115863 MsG0380017422.01.T01:intron 50.0%
TCCCTGACAGTGTTCATCCA+TGG - Chr3:96114707-96114726 MsG0380017422.01.T01:CDS 50.0%
TCCTAGGGAGTTCCTATGGT+TGG - Chr3:96115708-96115727 MsG0380017422.01.T01:CDS 50.0%
TTATGTCCGCGTAACCCTGA+TGG - Chr3:96115055-96115074 MsG0380017422.01.T01:CDS 50.0%
TTTCCACCATCAGGGTTACG+CGG + Chr3:96115064-96115083 None:intergenic 50.0%
! ACCGTGTTGCTGAGAGGAAT+TGG - Chr3:96116735-96116754 MsG0380017422.01.T01:intron 50.0%
! ACCTGAGAGTGCATCAGTTC+AGG - Chr3:96115870-96115889 MsG0380017422.01.T01:intron 50.0%
!! AGGTGGGGGAGTGTTTCATA+TGG - Chr3:96116226-96116245 MsG0380017422.01.T01:intron 50.0%
AAGGTGGTCCTAGAGAACCG+TGG - Chr3:96115318-96115337 MsG0380017422.01.T01:intron 55.0%
AGTGTCCCATGTAGCAGCTG+AGG + Chr3:96113722-96113741 None:intergenic 55.0%
GATCATCGTCCTGTACCAGG+CGG - Chr3:96114529-96114548 MsG0380017422.01.T01:CDS 55.0%
GCCAACCATAGGAACTCCCT+AGG + Chr3:96115712-96115731 None:intergenic 55.0%
GCCTGAACTGATGCACTCTC+AGG + Chr3:96115874-96115893 None:intergenic 55.0%
GGACGACAGAACCTCTGTTC+CGG - Chr3:96114952-96114971 MsG0380017422.01.T01:CDS 55.0%
TGTCAGGGACATGAGCGTCT+TGG + Chr3:96114696-96114715 None:intergenic 55.0%
! TTGTATCTTGTGCCGGCCTG+AGG - Chr3:96114144-96114163 MsG0380017422.01.T01:intron 55.0%
TGTCCGCGTAACCCTGATGG+TGG - Chr3:96115058-96115077 MsG0380017422.01.T01:CDS 60.0%
! CTGTCAGGCTCTGGTTGCTC+TGG + Chr3:96116051-96116070 None:intergenic 60.0%
! TCAGGCTCTGGTTGCTCTGG+AGG + Chr3:96116048-96116067 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 96113716 96116889 96113716 ID=MsG0380017422.01;Name=MsG0380017422.01
Chr3 mRNA 96113716 96116889 96113716 ID=MsG0380017422.01.T01;Parent=MsG0380017422.01;Name=MsG0380017422.01.T01;_AED=0.17;_eAED=0.18;_QI=0|0|0|1|1|1|7|0|568
Chr3 exon 96116800 96116889 96116800 ID=MsG0380017422.01.T01:exon:2245;Parent=MsG0380017422.01.T01
Chr3 exon 96115890 96116100 96115890 ID=MsG0380017422.01.T01:exon:2244;Parent=MsG0380017422.01.T01
Chr3 exon 96115563 96115762 96115563 ID=MsG0380017422.01.T01:exon:2243;Parent=MsG0380017422.01.T01
Chr3 exon 96115394 96115470 96115394 ID=MsG0380017422.01.T01:exon:2242;Parent=MsG0380017422.01.T01
Chr3 exon 96114844 96115301 96114844 ID=MsG0380017422.01.T01:exon:2241;Parent=MsG0380017422.01.T01
Chr3 exon 96114470 96114742 96114470 ID=MsG0380017422.01.T01:exon:2240;Parent=MsG0380017422.01.T01
Chr3 exon 96113716 96114113 96113716 ID=MsG0380017422.01.T01:exon:2239;Parent=MsG0380017422.01.T01
Chr3 CDS 96116800 96116889 96116800 ID=MsG0380017422.01.T01:cds;Parent=MsG0380017422.01.T01
Chr3 CDS 96115890 96116100 96115890 ID=MsG0380017422.01.T01:cds;Parent=MsG0380017422.01.T01
Chr3 CDS 96115563 96115762 96115563 ID=MsG0380017422.01.T01:cds;Parent=MsG0380017422.01.T01
Chr3 CDS 96115394 96115470 96115394 ID=MsG0380017422.01.T01:cds;Parent=MsG0380017422.01.T01
Chr3 CDS 96114844 96115301 96114844 ID=MsG0380017422.01.T01:cds;Parent=MsG0380017422.01.T01
Chr3 CDS 96114470 96114742 96114470 ID=MsG0380017422.01.T01:cds;Parent=MsG0380017422.01.T01
Chr3 CDS 96113716 96114113 96113716 ID=MsG0380017422.01.T01:cds;Parent=MsG0380017422.01.T01
Gene Sequence

>MsG0380017422.01.T01

ATGCCTCAGCTGCTACATGGGACACTTAAGGTAACCATAAGTGAAGTTGATAGGTTGCAAGCTGGATGTAATTTGGATTTCTGTCGAAAGATGGGTGAGATATTAGACGAAGAAGATCATCGTCCTGTACCAGGCGGTTCTAAAATTCGTGTCAGCATGCAATTCTCTAGTGTCATTGAGGATAGAAAATGTCTATGGTCTCAAGGAATACACATGCCATTTTTGGGAGTTCAGCGTACATTTTTCGATCAGAGACAAGGTTGTGGTGTTACTTTATACCAAGACGCTCATGTCCCTGACAAAATAACCTTGATTAGGGACCCAAACAAGCCAACAGAAAGTAGTATCACCCTAGGAGAAATACTCAAGAAAAAAGCCAATGAAGGTGTTAATGTTCTTGTGCTTGTTTGGGACGACAGAACCTCTGTTCCGGCTTTTAAGAAAGACGGTTTGATGGGAACACATGACCAAGAAACTGCAGAGTATTTTAAAAACACAAAGACTATAGTTGTTGATGGCCATCATGTTGAAGGATCGCAAAAGCGAACAGTTATCAGTTTCATAGGTGGTATTGATCTGTGCTCTATTAAGAAAGGTGGTCCTAGAGAACCGTGGCATGATATTCACTGCAAGCTAGAAGGACCTATTGCATGGGATGTGTTGTACAATTTTGAGCAGAGGTGGGAAAAGCAAGTCGGGAAGCAATTCCAACAATTCCTGTTCCCAATTCAAGAGCTTGATAGAATTCTAATCCATCCTTCTGATGCAATGTTATCAGAAGAAGATGGCGAAACTTGGAGCGTTCAGTTGTTTAGATCCATTGATGGTGGTGCTGTTTCTAACTTCCCTCAAGCACCAAATGAAGTTATTGAATTAGGCCTTGTTAGTGGAAAAGACAACATCATTGATAGAAGCATTCAAGATGCCTACATAAATGCTATACGAAGAGCAAAAAACTTCATCTACATTGAAAATCAGTATTTCCTAGGGAGTTCCTATGGTTGGCATTCAACTGATATTAAAGTTGAGGATATTGAAGGTATACCTGAGAGTGCATCAGTTCAGGCAATATTAGATTGGCAAAGAAGGACCATGGAGATGATGTATACTGAGATTGCTGATGCCATAAAAAAGAAGAATGTTGAAGCACACCCTCGTGATTATTTGACATTTTATTGTCTTGGTAAAAGGGAGAGTAAGAAAGATGGAGAGTACACTCCTCCAGAGCAACCAGAGCCTGACAGTGATTATCATAGAGCACAAAAGTCTAGAAGATTCATGATCTATGTTCATTCCAAGATGATGATAGTGGATGATGAATACATAGTGATTGGTTCAGCCAACATAAACCAAAGATCAATGGATGGTGGAAGAGACACAGAGATTGCAATGGGTGCATTTCAACCTCATCATCTAGCATCCACATCCAATGGCTCACAAAGACCACAAGGTCAAGTATATGGCTTCAGGAGAGCATTATGGTATGAACATATTGGAGACAACAGTGATGATTTTGACGAGCCTGAAAGTGTGGAATGCGTAAAACTTTTGAACCGTGTTGCTGAGAGGAATTGGAAATTATACTGTGATGATGCATTAGATGAAAGTGTAAATACTCACCTTTTACGGTATCCTGTTGAAGTGGGTGAAGATGGAAGTGTGACATCACTTTCAGGGATGCAATATTTCCTGATACAATGGCTTTGA
Protein sequence

>MsG0380017422.01.T01

MPQLLHGTLKVTISEVDRLQAGCNLDFCRKMGEILDEEDHRPVPGGSKIRVSMQFSSVIEDRKCLWSQGIHMPFLGVQRTFFDQRQGCGVTLYQDAHVPDKITLIRDPNKPTESSITLGEILKKKANEGVNVLVLVWDDRTSVPAFKKDGLMGTHDQETAEYFKNTKTIVVDGHHVEGSQKRTVISFIGGIDLCSIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKQFQQFLFPIQELDRILIHPSDAMLSEEDGETWSVQLFRSIDGGAVSNFPQAPNEVIELGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWHSTDIKVEDIEGIPESASVQAILDWQRRTMEMMYTEIADAIKKKNVEAHPRDYLTFYCLGKRESKKDGEYTPPEQPEPDSDYHRAQKSRRFMIYVHSKMMIVDDEYIVIGSANINQRSMDGGRDTEIAMGAFQPHHLASTSNGSQRPQGQVYGFRRALWYEHIGDNSDDFDEPESVECVKLLNRVAERNWKLYCDDALDESVNTHLLRYPVEVGEDGSVTSLSGMQYFLIQWL*