AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017465.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017465.01.T01 MTR_3g107960 84.100 239 21 2 430 651 750 988 2.22e-133 421
MsG0380017465.01.T01 MTR_3g107960 65.789 304 46 7 183 431 341 641 2.15e-101 335
MsG0380017465.01.T01 MTR_3g107960 70.896 134 37 1 83 214 68 201 1.39e-43 169
MsG0380017465.01.T01 MTR_3g101100 72.199 241 44 2 430 647 925 1165 4.49e-109 359
MsG0380017465.01.T01 MTR_3g101100 81.915 94 17 0 337 430 722 815 1.09e-43 169
MsG0380017465.01.T01 MTR_3g101100 50.980 153 61 3 26 175 14 155 3.27e-33 137
MsG0380017465.01.T01 MTR_3g101100 61.765 68 26 0 231 298 564 631 3.69e-17 86.7
MsG0380017465.01.T01 MTR_5g085310 70.213 235 48 3 430 647 634 863 2.64e-104 340
MsG0380017465.01.T01 MTR_5g085310 44.194 310 82 9 209 430 218 524 6.84e-57 208
MsG0380017465.01.T01 MTR_5g085310 34.762 210 110 7 83 273 55 256 4.68e-15 79.7
MsG0380017465.01.T01 MTR_6g017010 67.660 235 53 5 430 647 365 593 2.08e-99 321
MsG0380017465.01.T01 MTR_6g017010 81.395 86 13 1 337 422 178 260 9.33e-37 147
MsG0380017465.01.T01 MTR_5g017020 62.343 239 68 4 430 647 190 427 2.46e-87 283
MsG0380017465.01.T01 MTR_5g017020 62.069 87 18 1 337 423 22 93 2.02e-25 111
MsG0380017465.01.T01 MTR_5g017020 62.343 239 68 4 430 647 190 427 2.99e-87 283
MsG0380017465.01.T01 MTR_5g017020 62.069 87 18 1 337 423 22 93 1.97e-25 111
MsG0380017465.01.T01 MTR_6g017000 57.787 244 86 2 430 656 668 911 1.02e-85 288
MsG0380017465.01.T01 MTR_6g017000 38.298 282 105 11 209 430 286 558 6.80e-41 160
MsG0380017465.01.T01 MTR_6g017140 53.112 241 77 4 430 651 221 444 7.56e-77 253
MsG0380017465.01.T01 MTR_6g017140 58.442 77 31 1 359 434 39 115 4.55e-22 100
MsG0380017465.01.T01 MTR_4g005050 40.157 254 124 5 430 656 1245 1497 2.77e-52 196
MsG0380017465.01.T01 MTR_4g005050 54.023 87 40 0 337 423 1043 1129 8.72e-25 110
MsG0380017465.01.T01 MTR_0299s0030 67.692 130 33 3 522 651 146 266 7.74e-49 174
MsG0380017465.01.T01 MTR_6g017120 88.235 51 5 1 430 480 39 88 4.45e-25 102
MsG0380017465.01.T01 MTR_1g047930 35.065 231 92 5 116 298 1 221 1.08e-24 107
MsG0380017465.01.T01 MTR_5g085317 62.857 70 21 2 494 563 30 94 1.31e-18 82.8
MsG0380017465.01.T01 MTR_6g016945 61.667 60 23 0 249 308 96 155 7.38e-15 76.3
MsG0380017465.01.T01 MTR_1g047940 55.556 63 22 1 468 530 12 68 8.82e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017465.01.T01 AT3G12980 44.488 254 113 5 430 656 1212 1464 5.55e-60 218
MsG0380017465.01.T01 AT3G12980 45.977 87 46 1 337 423 1011 1096 4.89e-19 92.8
MsG0380017465.01.T01 AT3G12980 44.488 254 113 5 430 656 1131 1383 7.64e-60 218
MsG0380017465.01.T01 AT3G12980 45.977 87 46 1 337 423 930 1015 4.99e-19 92.8
MsG0380017465.01.T01 AT1G16710 40.945 254 122 5 430 656 1241 1493 1.82e-55 205
MsG0380017465.01.T01 AT1G16710 51.724 87 42 0 337 423 1039 1125 6.92e-23 105
MsG0380017465.01.T01 AT1G16710 40.945 254 122 5 430 656 1215 1467 1.82e-55 205
MsG0380017465.01.T01 AT1G16710 51.724 87 42 0 337 423 1013 1099 7.65e-23 104
MsG0380017465.01.T01 AT1G16710 40.945 254 122 5 430 656 1215 1467 1.82e-55 205
MsG0380017465.01.T01 AT1G16710 51.724 87 42 0 337 423 1013 1099 7.65e-23 104
MsG0380017465.01.T01 AT1G16710 40.945 254 122 5 430 656 1215 1467 1.82e-55 205
MsG0380017465.01.T01 AT1G16710 51.724 87 42 0 337 423 1013 1099 7.65e-23 104
MsG0380017465.01.T01 AT1G16710 40.945 254 122 5 430 656 1215 1467 1.82e-55 205
MsG0380017465.01.T01 AT1G16710 51.724 87 42 0 337 423 1013 1099 7.65e-23 104
MsG0380017465.01.T01 AT1G16710 40.945 254 122 5 430 656 1212 1464 1.89e-55 205
MsG0380017465.01.T01 AT1G16710 51.724 87 42 0 337 423 1010 1096 7.32e-23 105
MsG0380017465.01.T01 AT1G16710 40.945 254 122 5 430 656 1176 1428 2.29e-55 205
MsG0380017465.01.T01 AT1G16710 51.724 87 42 0 337 423 974 1060 8.87e-23 104
MsG0380017465.01.T01 AT1G16710 40.945 254 122 5 430 656 1176 1428 2.29e-55 205
MsG0380017465.01.T01 AT1G16710 51.724 87 42 0 337 423 974 1060 8.87e-23 104
MsG0380017465.01.T01 AT1G16710 40.945 254 122 5 430 656 1176 1428 2.29e-55 205
MsG0380017465.01.T01 AT1G16710 51.724 87 42 0 337 423 974 1060 8.87e-23 104
MsG0380017465.01.T01 AT1G79000 41.339 254 121 5 430 656 1232 1484 3.75e-55 204
MsG0380017465.01.T01 AT1G79000 32.895 228 94 4 255 423 889 1116 2.05e-26 116
MsG0380017465.01.T01 AT1G79000 41.339 254 121 5 430 656 1232 1484 3.99e-55 204
MsG0380017465.01.T01 AT1G79000 32.895 228 94 4 255 423 889 1116 2.08e-26 116
MsG0380017465.01.T01 AT1G79000 41.339 254 121 5 430 656 1208 1460 4.15e-55 204
MsG0380017465.01.T01 AT1G79000 32.895 228 94 4 255 423 865 1092 2.07e-26 116
MsG0380017465.01.T01 AT1G55970 41.406 256 121 5 429 656 1006 1260 7.60e-55 203
MsG0380017465.01.T01 AT1G55970 47.126 87 46 0 337 423 805 891 3.78e-18 89.7
MsG0380017465.01.T01 AT1G55970 41.569 255 120 5 430 656 993 1246 1.14e-54 202
MsG0380017465.01.T01 AT1G55970 47.126 87 46 0 337 423 805 891 3.74e-18 89.7
MsG0380017465.01.T01 AT1G16710 44.390 205 93 4 430 614 1215 1418 2.11e-51 193
MsG0380017465.01.T01 AT1G16710 51.724 87 42 0 337 423 1013 1099 5.11e-23 105
MsG0380017465.01.T01 AT1G67220 35.271 258 128 9 430 656 931 1180 3.26e-40 159
MsG0380017465.01.T01 AT1G67220 51.724 87 42 0 337 423 729 815 1.10e-19 94.7

Find 132 sgRNAs with CRISPR-Local

Find 519 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGCCTCAATTATTGTATT+TGG 0.083119 3:-96599889 None:intergenic
CTGAACTTGGTGGGAATATT+TGG 0.140434 3:+96598238 MsG0380017465.01.T01:CDS
TTACCAAAAGCTGCTAATTT+TGG 0.160765 3:+96600853 MsG0380017465.01.T01:CDS
TTCCAAAAGGTAAAGCTATT+TGG 0.179472 3:+96600067 MsG0380017465.01.T01:CDS
GGCAGGTCATGAACAATAAA+AGG 0.212094 3:-96598854 None:intergenic
CACTGAATGCAAGAAATTTC+AGG 0.225944 3:+96602515 MsG0380017465.01.T01:CDS
CAGCCTCAATTATTGTATTT+GGG 0.232255 3:-96599888 None:intergenic
CCCTGGTAGGCAATATCTTT+TGG 0.238306 3:-96602413 None:intergenic
GAGAGTGGATATTTGAAAAT+AGG 0.250126 3:+96602877 MsG0380017465.01.T01:CDS
AACCAAATAGCTTTACCTTT+TGG 0.276908 3:-96600069 None:intergenic
ATGGTCTTTAAAGCTCTATT+TGG 0.306293 3:-96602138 None:intergenic
CTACAACAACAAAAGAGATT+TGG 0.312602 3:+96600762 MsG0380017465.01.T01:CDS
ACAACTGATGAAGAATTTCT+TGG 0.316401 3:-96598270 None:intergenic
GCACCAAAATTAGCAGCTTT+TGG 0.316485 3:-96600856 None:intergenic
TCTGATGCCGCTGGTTATTA+TGG 0.320032 3:+96598806 MsG0380017465.01.T01:CDS
TCGTAACTTACCCGTTTATA+TGG 0.326288 3:+96598931 MsG0380017465.01.T01:CDS
TCTCGTTTGCCATACTTTGA+TGG 0.326312 3:+96602024 MsG0380017465.01.T01:CDS
TTGCATCACCAGAATGTCTT+TGG 0.327789 3:-96602190 None:intergenic
GTTTCTCAACTTGCTACATA+TGG 0.336552 3:+96601643 MsG0380017465.01.T01:CDS
GGGTCAGATAGTCTCCCTTC+TGG 0.359944 3:-96598833 None:intergenic
GACATACAAGGCAGCAGAAC+TGG 0.360749 3:+96599709 MsG0380017465.01.T01:CDS
TCTTTGGCAGTGTCTTTAGA+AGG 0.367904 3:-96602174 None:intergenic
CTTGCGAAGGGTTCTGAACT+TGG 0.374398 3:+96598225 MsG0380017465.01.T01:CDS
AGACACTGCCAAAGACATTC+TGG 0.381560 3:+96602182 MsG0380017465.01.T01:CDS
TGCCATGAAGTGATAGCATC+TGG 0.393848 3:+96602477 MsG0380017465.01.T01:CDS
GGCAGTGTCTTTAGAAGGAT+TGG 0.396884 3:-96602169 None:intergenic
AAAATAGTTGCTACTTGATC+TGG 0.400825 3:-96598977 None:intergenic
TCCCAGATGCTATCACTTCA+TGG 0.404024 3:-96602479 None:intergenic
CTGCCTTGCTCTCCTGATGA+TGG 0.413683 3:+96598872 MsG0380017465.01.T01:CDS
TCTGAGAAAGGAATCTGTTC+AGG 0.416816 3:+96599963 MsG0380017465.01.T01:CDS
CAGTAGTCTCCATCAAAGTA+TGG 0.418646 3:-96602033 None:intergenic
GCCTGTGCTCCTTCAAGAAA+AGG 0.420899 3:+96601666 MsG0380017465.01.T01:CDS
CATGGTTCTTGGCAAGTCCT+TGG 0.422145 3:-96600878 None:intergenic
GATTGCTTCCACCATATAAA+CGG 0.424686 3:-96598942 None:intergenic
TTTATATGGTGGAAGCAATC+TGG 0.427432 3:+96598945 MsG0380017465.01.T01:CDS
CGGCGTAGCTTATCATTCTT+CGG 0.442591 3:-96601732 None:intergenic
TATCCCATCCTGGTTGAATC+CGG 0.446469 3:-96599809 None:intergenic
TGGTCACTGAGCATGGTTCT+TGG 0.450291 3:-96600889 None:intergenic
AAATGTGTGCATCAGAACTA+TGG 0.452913 3:-96602686 None:intergenic
CCTGTGCTCCTTCAAGAAAA+GGG 0.454880 3:+96601667 MsG0380017465.01.T01:CDS
CACACACATATCAGCAAGTA+GGG 0.463928 3:-96598906 None:intergenic
TTCTAAGTGGTCACTGAGCA+TGG 0.465266 3:-96600896 None:intergenic
CTACTGGTGTGGTTATGTTA+TGG 0.465543 3:+96602050 MsG0380017465.01.T01:CDS
GTAGTAATAATTCCAGCATA+GGG 0.468557 3:-96598560 None:intergenic
ACTTACCACTGCTGCTTCAA+AGG 0.469361 3:+96598581 MsG0380017465.01.T01:CDS
CATCATCAGGAGAGCAAGGC+AGG 0.473198 3:-96598871 None:intergenic
TGAGCAATTTGCCCCTATGC+TGG 0.473268 3:+96598548 MsG0380017465.01.T01:CDS
GATGCACACATTTCAAAGAA+TGG 0.475962 3:+96602696 MsG0380017465.01.T01:CDS
ATTTGGTTAAAGCTCATGAA+TGG 0.480401 3:+96600084 MsG0380017465.01.T01:CDS
GAGGACATTCAAGGCAGAAC+CGG 0.485084 3:+96599790 MsG0380017465.01.T01:CDS
TTATGGAAGAGAGAGCAAAC+TGG 0.486815 3:+96600938 MsG0380017465.01.T01:CDS
TTTCTCAACTTGCTACATAT+GGG 0.487718 3:+96601644 MsG0380017465.01.T01:CDS
TACGCTGATTCAACGTCTCC+AGG 0.490165 3:-96598757 None:intergenic
GAAAATCATGGAGGAAGTGT+TGG 0.496873 3:+96593973 None:intergenic
GCCAAAAGATATTGCCTACC+AGG 0.497791 3:+96602412 MsG0380017465.01.T01:CDS
CGAGGTGCATACACTATGTC+AGG 0.500355 3:+96602719 MsG0380017465.01.T01:CDS
AGAACTGGATTCATCCAGGC+GGG 0.510333 3:+96599724 MsG0380017465.01.T01:CDS
AGAACTTATTATTGTTCATG+AGG 0.512614 3:+96599762 MsG0380017465.01.T01:CDS
AAAATCATGGAGGAAGTGTT+GGG 0.513221 3:+96593974 None:intergenic
GGGGTTGATGAACCATCATC+AGG 0.513452 3:-96598884 None:intergenic
ATTGCTTCCACCATATAAAC+GGG 0.514471 3:-96598941 None:intergenic
CGAAGGGTTCTGAACTTGGT+GGG 0.514839 3:+96598229 MsG0380017465.01.T01:CDS
AGTAGTAATAATTCCAGCAT+AGG 0.515149 3:-96598561 None:intergenic
GGTTATTATGGCGTTCCAGA+AGG 0.515241 3:+96598818 MsG0380017465.01.T01:CDS
ATCATTATGCTTAGGTGTGG+AGG 0.519434 3:-96602845 None:intergenic
ACATATTAGTAGTCTGAGAA+AGG 0.521580 3:+96599951 MsG0380017465.01.T01:CDS
CATGAACCAACTATTCCAAA+AGG 0.521699 3:+96600054 MsG0380017465.01.T01:CDS
AGCCTCAATTATTGTATTTG+GGG 0.527381 3:-96599887 None:intergenic
ATCCCCAAATACAATAATTG+AGG 0.528154 3:+96599885 MsG0380017465.01.T01:CDS
AGAAATTTCAGGAGTGTGAA+AGG 0.528641 3:+96602526 MsG0380017465.01.T01:CDS
AGTCATACGTAAACAGATCA+AGG 0.529648 3:-96600017 None:intergenic
GAACTTATTATTGTTCATGA+GGG 0.530986 3:+96599763 MsG0380017465.01.T01:CDS
AGGATGATATCATTATGCTT+AGG 0.531500 3:-96602853 None:intergenic
TGGATTACTTACATGTGGAC+TGG 0.532864 3:-96598331 None:intergenic
GTTTCTAAGTCTGATGCCGC+TGG 0.533231 3:+96598797 MsG0380017465.01.T01:CDS
ACGTGTGAACAAATCAATCA+AGG 0.540321 3:-96599914 None:intergenic
TATTGTTCATGAGGGTGAAG+AGG 0.540740 3:+96599771 MsG0380017465.01.T01:CDS
AATGCAATAAATGCAAAAGA+TGG 0.545817 3:+96600719 MsG0380017465.01.T01:CDS
GCGAAGGGTTCTGAACTTGG+TGG 0.548679 3:+96598228 MsG0380017465.01.T01:CDS
AGAAGGATTGGCATGTCCCA+TGG 0.548735 3:-96602157 None:intergenic
GCACACACATATCAGCAAGT+AGG 0.548931 3:-96598907 None:intergenic
TCAGCGTATGCAAGCTCTAG+TGG 0.552958 3:+96598772 MsG0380017465.01.T01:CDS
AGGGAACGAGAATCTTGATA+AGG 0.553771 3:+96600972 MsG0380017465.01.T01:CDS
GAGGGTGAAGAGGACATTCA+AGG 0.555916 3:+96599781 MsG0380017465.01.T01:CDS
CAGCAGAACTGGATTCATCC+AGG 0.556478 3:+96599720 MsG0380017465.01.T01:CDS
AATTCACACAGAGACACATA+AGG 0.558028 3:-96601774 None:intergenic
AGGTAATTGAAAACACTGGC+AGG 0.565704 3:-96599997 None:intergenic
CATACTTTGATGGAGACTAC+TGG 0.567433 3:+96602034 MsG0380017465.01.T01:CDS
TATGGAAGAGAGAGCAAACT+GGG 0.568310 3:+96600939 MsG0380017465.01.T01:CDS
AGCTGAAAAGATGCTTGCGA+AGG 0.568364 3:+96598212 MsG0380017465.01.T01:CDS
GCAGGTCATGAACAATAAAA+GGG 0.568506 3:-96598853 None:intergenic
AGATATTGATGACGATGAAG+AGG 0.569424 3:+96599687 MsG0380017465.01.T01:CDS
GTTGCTACTTGATCTGGTGT+TGG 0.574954 3:-96598971 None:intergenic
ATCAACAGTAGGCTACTCTC+AGG 0.578217 3:+96599653 MsG0380017465.01.T01:intron
AACTGGATTCATCCAGGCGG+GGG 0.582008 3:+96599726 MsG0380017465.01.T01:CDS
GAACCGGATTCAACCAGGAT+GGG 0.586122 3:+96599806 MsG0380017465.01.T01:CDS
AGGCAGAACCGGATTCAACC+AGG 0.589059 3:+96599801 MsG0380017465.01.T01:CDS
GAACCATCATCAGGAGAGCA+AGG 0.589504 3:-96598875 None:intergenic
TGATAGCATCTGGGAAGCGA+TGG 0.590031 3:+96602487 MsG0380017465.01.T01:CDS
CAAACGAGAAGTTGTCACCT+TGG 0.592914 3:-96602010 None:intergenic
AAATAGAGCTTTAAAGACCA+TGG 0.593540 3:+96602140 MsG0380017465.01.T01:CDS
GTTATTATGGCGTTCCAGAA+GGG 0.598014 3:+96598819 MsG0380017465.01.T01:CDS
GTTATGTTATGGAAGCAGCC+AGG 0.598981 3:+96602061 MsG0380017465.01.T01:CDS
TAACTTACCCGTTTATATGG+TGG 0.600331 3:+96598934 MsG0380017465.01.T01:CDS
GATATCATTATGCTTAGGTG+TGG 0.601695 3:-96602848 None:intergenic
TCATTATGCTTAGGTGTGGA+GGG 0.604415 3:-96602844 None:intergenic
CAGCGTATGCAAGCTCTAGT+GGG 0.605184 3:+96598773 MsG0380017465.01.T01:CDS
AATGATATCATCCTTGAGAG+TGG 0.608883 3:+96602862 MsG0380017465.01.T01:CDS
CTGTGCTCCTTCAAGAAAAG+GGG 0.610873 3:+96601668 MsG0380017465.01.T01:CDS
GCCATGAAGTGATAGCATCT+GGG 0.616414 3:+96602478 MsG0380017465.01.T01:CDS
GACGATGAAGAGGACATACA+AGG 0.617846 3:+96599697 MsG0380017465.01.T01:CDS
AGAACCGGATTCAACCAGGA+TGG 0.619756 3:+96599805 MsG0380017465.01.T01:CDS
AATAGAGCTTTAAAGACCAT+GGG 0.619881 3:+96602141 MsG0380017465.01.T01:CDS
GCTGAAAAGATGCTTGCGAA+GGG 0.620277 3:+96598213 MsG0380017465.01.T01:CDS
ACAAACCTTTGAAGCAGCAG+TGG 0.625425 3:-96598586 None:intergenic
GCAGGAGGAATATATGAACC+TGG 0.625899 3:+96598739 MsG0380017465.01.T01:intron
AGAATGATAAGCTACGCCGT+TGG 0.627014 3:+96601736 MsG0380017465.01.T01:CDS
CCAAAAGATATTGCCTACCA+GGG 0.627033 3:+96602413 MsG0380017465.01.T01:CDS
CACACATATCAGCAAGTAGG+GGG 0.627930 3:-96598904 None:intergenic
ATCAAGGTAATTGAAAACAC+TGG 0.634094 3:-96600001 None:intergenic
GAACTGGATTCATCCAGGCG+GGG 0.637303 3:+96599725 MsG0380017465.01.T01:CDS
ACAGTAGGCTACTCTCAGGA+AGG 0.653513 3:+96599657 MsG0380017465.01.T01:intron
TAGTAATAATTCCAGCATAG+GGG 0.660364 3:-96598559 None:intergenic
TAATTGAAAACACTGGCAGG+TGG 0.686087 3:-96599994 None:intergenic
CAGAACTGGATTCATCCAGG+CGG 0.686695 3:+96599723 MsG0380017465.01.T01:CDS
TTTGATGGAGACTACTGGTG+TGG 0.693838 3:+96602039 MsG0380017465.01.T01:CDS
ACACATTTCAAAGAATGGCG+AGG 0.706634 3:+96602701 MsG0380017465.01.T01:CDS
GAGAAAGAAAGACTGACCAA+CGG 0.709138 3:-96601752 None:intergenic
CTACTGAAAAGGGAACTCCA+AGG 0.723636 3:+96601993 MsG0380017465.01.T01:intron
TGGAACGCCATAATAACCAG+CGG 0.726670 3:-96598813 None:intergenic
ACACATATCAGCAAGTAGGG+GGG 0.728095 3:-96598903 None:intergenic
ACACACATATCAGCAAGTAG+GGG 0.734890 3:-96598905 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATGAAACTTATATTAA+AGG + Chr3:96594661-96594680 MsG0380017465.01.T01:intron 10.0%
!! TAAAAATATTGTATTGAAAA+TGG - Chr3:96597410-96597429 None:intergenic 10.0%
!! TATTACAATTTAAAAACAAA+TGG + Chr3:96595113-96595132 MsG0380017465.01.T01:intron 10.0%
!!! GTATTTATATTTTTAGTTTA+GGG - Chr3:96597684-96597703 None:intergenic 10.0%
!!! TTGTTTTTATTTAAGTTTAA+CGG - Chr3:96597489-96597508 None:intergenic 10.0%
!!! TTTAAATTTAAAATTGTTCT+CGG + Chr3:96596940-96596959 MsG0380017465.01.T01:intron 10.0%
!! AATAAACATAATAGAAAGAA+TGG - Chr3:96601578-96601597 None:intergenic 15.0%
!! AATTACAATGAATGAAATTA+GGG - Chr3:96597856-96597875 None:intergenic 15.0%
!! AGTTAAAATATTATTGAATC+CGG - Chr3:96597355-96597374 None:intergenic 15.0%
!! ATAAATTGTTAACTTCTATA+TGG - Chr3:96600322-96600341 None:intergenic 15.0%
!! TAATTTCATTCATTGTAATT+GGG + Chr3:96597856-96597875 MsG0380017465.01.T01:intron 15.0%
!! TATGAAGAAAATATTATTGT+TGG + Chr3:96601938-96601957 MsG0380017465.01.T01:intron 15.0%
!! TATTAATAATTCGAAAATGA+CGG + Chr3:96596594-96596613 MsG0380017465.01.T01:intron 15.0%
!! TGATAGAATCTTTAATAATA+AGG - Chr3:96594916-96594935 None:intergenic 15.0%
!! TTACTTGATTTAAACTATAT+TGG + Chr3:96594524-96594543 MsG0380017465.01.T01:intron 15.0%
!! TTCATATGCTAAAAAAATTA+AGG + Chr3:96596697-96596716 MsG0380017465.01.T01:intron 15.0%
!!! AAGATTTATTTTCAAATTTG+CGG + Chr3:96594614-96594633 MsG0380017465.01.T01:intron 15.0%
!!! ACAAAATTTTCTATTTTTGT+TGG - Chr3:96596985-96597004 None:intergenic 15.0%
!!! ATATTTGTTTTTATTTCTTG+TGG + Chr3:96598164-96598183 MsG0380017465.01.T01:intron 15.0%
!!! ATTGTCAATTTTTTTTATAG+CGG - Chr3:96596504-96596523 None:intergenic 15.0%
!!! CAAAATTTTCTATTTTTGTT+GGG - Chr3:96596984-96597003 None:intergenic 15.0%
!!! GGTATTTATATTTTTAGTTT+AGG - Chr3:96597685-96597704 None:intergenic 15.0%
!!! TTAAATTTAAAATTGTTCTC+GGG + Chr3:96596941-96596960 MsG0380017465.01.T01:intron 15.0%
!! AAAAATTAGTAGATTTACAC+CGG + Chr3:96597333-96597352 MsG0380017465.01.T01:intron 20.0%
!! AAGTATGTATTCATTTCAAA+GGG - Chr3:96602595-96602614 None:intergenic 20.0%
!! AATGTAAATCTTCAATTGAA+TGG - Chr3:96599276-96599295 None:intergenic 20.0%
!! ATAAAAGAATATATCCCATT+GGG - Chr3:96602269-96602288 None:intergenic 20.0%
!! ATAAGTTAGCAGTATTAATT+AGG - Chr3:96596144-96596163 None:intergenic 20.0%
!! ATCATGTAAATAACTTAAAC+TGG - Chr3:96602331-96602350 None:intergenic 20.0%
!! CAATTACAATGAATGAAATT+AGG - Chr3:96597857-96597876 None:intergenic 20.0%
!! CGCTTAAAAGAAATTAAAAA+CGG + Chr3:96600817-96600836 MsG0380017465.01.T01:CDS 20.0%
!! CTAATTTCATTCATTGTAAT+TGG + Chr3:96597855-96597874 MsG0380017465.01.T01:intron 20.0%
!! GTAATCAATTCAATTCAATT+GGG + Chr3:96594315-96594334 MsG0380017465.01.T01:intron 20.0%
!! GTATCTTTCTATGATAAAAA+AGG + Chr3:96601914-96601933 MsG0380017465.01.T01:intron 20.0%
!! TAAAAACAAATATCAGTTAG+AGG - Chr3:96598157-96598176 None:intergenic 20.0%
!! TAAGTTAGCAGTATTAATTA+GGG - Chr3:96596143-96596162 None:intergenic 20.0%
!! TAATCAATTCAATTCAATTG+GGG + Chr3:96594316-96594335 MsG0380017465.01.T01:intron 20.0%
!! TATAAAAGAATATATCCCAT+TGG - Chr3:96602270-96602289 None:intergenic 20.0%
!! TGAATGAATACAAATAAATG+CGG + Chr3:96598014-96598033 MsG0380017465.01.T01:intron 20.0%
!! TGTAATCAATTCAATTCAAT+TGG + Chr3:96594314-96594333 MsG0380017465.01.T01:intron 20.0%
!! TTAAAGAACCCATAAAAAAT+AGG - Chr3:96595930-96595949 None:intergenic 20.0%
!! TTTATATTGTTTGTTTATGC+AGG + Chr3:96601892-96601911 MsG0380017465.01.T01:intron 20.0%
!!! AAATTATATTTTAACCTGTG+AGG - Chr3:96594380-96594399 None:intergenic 20.0%
!!! AACATTTGCCTATTTTTTAT+GGG + Chr3:96595919-96595938 MsG0380017465.01.T01:intron 20.0%
!!! AATTATATTTTAACCTGTGA+GGG - Chr3:96594379-96594398 None:intergenic 20.0%
!!! ATCATTGATTAGTTTAATAG+TGG - Chr3:96597580-96597599 None:intergenic 20.0%
!!! ATTATTTTTTGTTCAAGTAC+AGG + Chr3:96597026-96597045 MsG0380017465.01.T01:intron 20.0%
!!! ATTTTTTATGGGTTCTTTAA+AGG + Chr3:96595930-96595949 MsG0380017465.01.T01:intron 20.0%
!!! CGTTTTTAATTTCTTTTAAG+CGG - Chr3:96600819-96600838 None:intergenic 20.0%
!!! CTTTTTAAACTCTATTTCTA+TGG + Chr3:96601533-96601552 MsG0380017465.01.T01:intron 20.0%
!!! GTAATATTTTTGGCTTTTTA+TGG - Chr3:96595099-96595118 None:intergenic 20.0%
!!! TAACATTTGCCTATTTTTTA+TGG + Chr3:96595918-96595937 MsG0380017465.01.T01:intron 20.0%
!!! TATTAATTAGGGGTATATTT+AGG - Chr3:96596132-96596151 None:intergenic 20.0%
!!! TTAATACTGCTAACTTATTT+TGG + Chr3:96596146-96596165 MsG0380017465.01.T01:intron 20.0%
!!! TTTAGAATTCTTATAACACA+CGG - Chr3:96600524-96600543 None:intergenic 20.0%
!!! TTTTTTATGGGTTCTTTAAA+GGG + Chr3:96595931-96595950 MsG0380017465.01.T01:intron 20.0%
! AAAGAAATGATCATATACGT+TGG - Chr3:96601969-96601988 None:intergenic 25.0%
! AAAGATAATTTAGGTAGACA+TGG - Chr3:96595199-96595218 None:intergenic 25.0%
! AAATGAATACATACTTGAAC+TGG + Chr3:96602599-96602618 MsG0380017465.01.T01:intron 25.0%
! AAGTTAGCAGTATTAATTAG+GGG - Chr3:96596142-96596161 None:intergenic 25.0%
! AATGAATGAAATTAGGGTTA+GGG - Chr3:96597850-96597869 None:intergenic 25.0%
! AATGCAATAAATGCAAAAGA+TGG + Chr3:96600719-96600738 MsG0380017465.01.T01:CDS 25.0%
! AATTCATCGTTTATCAATGT+CGG + Chr3:96597907-96597926 MsG0380017465.01.T01:intron 25.0%
! AATTGTTATACTCATACGTT+TGG + Chr3:96595518-96595537 MsG0380017465.01.T01:intron 25.0%
! ACGAATAAGGATTAAAATTG+GGG - Chr3:96599052-96599071 None:intergenic 25.0%
! AGAAAAATACCAATATCTCA+TGG - Chr3:96601515-96601534 None:intergenic 25.0%
! AGAAATGTGAAAAAAGCAAA+CGG + Chr3:96596266-96596285 MsG0380017465.01.T01:intron 25.0%
! AGAACTTATTATTGTTCATG+AGG + Chr3:96599762-96599781 MsG0380017465.01.T01:CDS 25.0%
! AGTAATTTCATGCAAAACAT+TGG + Chr3:96602785-96602804 MsG0380017465.01.T01:intron 25.0%
! ATGCATCTAGTAATTTGAAA+AGG - Chr3:96596096-96596115 None:intergenic 25.0%
! ATGTCTACCTAAATTATCTT+TGG + Chr3:96595198-96595217 MsG0380017465.01.T01:intron 25.0%
! CAAACAATATAAAGATTCAG+TGG - Chr3:96601885-96601904 None:intergenic 25.0%
! CAAATGGGTGTTTATATATA+GGG - Chr3:96596047-96596066 None:intergenic 25.0%
! CAAGTATGTATTCATTTCAA+AGG - Chr3:96602596-96602615 None:intergenic 25.0%
! CACGAATAAGGATTAAAATT+GGG - Chr3:96599053-96599072 None:intergenic 25.0%
! CATACAAACAAAGGATAATT+TGG + Chr3:96596194-96596213 MsG0380017465.01.T01:intron 25.0%
! GAAAACAAAGAAGATAAAGA+AGG - Chr3:96601840-96601859 None:intergenic 25.0%
! GAAAATCATATGAAAACTTC+AGG - Chr3:96602757-96602776 None:intergenic 25.0%
! GAAATTATCCACTATAGAAT+TGG + Chr3:96595034-96595053 MsG0380017465.01.T01:intron 25.0%
! GAACTTATTATTGTTCATGA+GGG + Chr3:96599763-96599782 MsG0380017465.01.T01:CDS 25.0%
! GAATGAATACAAATAAATGC+GGG + Chr3:96598015-96598034 MsG0380017465.01.T01:intron 25.0%
! GATAAACGATGAATTGATTA+AGG - Chr3:96597902-96597921 None:intergenic 25.0%
! GATAAATCTTCGATGTTAAT+AGG - Chr3:96597249-96597268 None:intergenic 25.0%
! GCATAAGTAGCAAATTAAAT+GGG - Chr3:96599164-96599183 None:intergenic 25.0%
! GCATTTATTTGTATTCATTC+AGG - Chr3:96598015-96598034 None:intergenic 25.0%
! GGTTAAGAATGTGAATTAAA+TGG - Chr3:96597994-96598013 None:intergenic 25.0%
! GTGTGTTATAAGAATTCTAA+AGG + Chr3:96600523-96600542 MsG0380017465.01.T01:intron 25.0%
! TAATCGATATTGAAACTTAC+AGG - Chr3:96600627-96600646 None:intergenic 25.0%
! TCAAATGGGTGTTTATATAT+AGG - Chr3:96596048-96596067 None:intergenic 25.0%
! TCTTGATCTATAAGAGAATT+CGG - Chr3:96601205-96601224 None:intergenic 25.0%
! TGCATAAGTAGCAAATTAAA+TGG - Chr3:96599165-96599184 None:intergenic 25.0%
! TGCATCTAGTAATTTGAAAA+GGG - Chr3:96596095-96596114 None:intergenic 25.0%
! TTACTTTACAAACGTCATAA+GGG - Chr3:96597311-96597330 None:intergenic 25.0%
! TTCTTCCTTTCTACAAAAAT+AGG - Chr3:96600471-96600490 None:intergenic 25.0%
! TTGAAAATGGTGAAAATTGA+TGG - Chr3:96597397-96597416 None:intergenic 25.0%
! TTGAATTTCTGCAAAATTGT+AGG + Chr3:96601077-96601096 MsG0380017465.01.T01:intron 25.0%
! TTTAACACACATACAAACAA+AGG + Chr3:96596185-96596204 MsG0380017465.01.T01:intron 25.0%
! TTTACTTTACAAACGTCATA+AGG - Chr3:96597312-96597331 None:intergenic 25.0%
!! ACCTTGATTTTTGTAAGAAA+CGG + Chr3:96601619-96601638 MsG0380017465.01.T01:CDS 25.0%
!! ATGGTTCTTCTTTTAATCAT+TGG + Chr3:96600103-96600122 MsG0380017465.01.T01:intron 25.0%
!! GTTATAAGAATTCTAAAGGT+GGG + Chr3:96600527-96600546 MsG0380017465.01.T01:intron 25.0%
!! TACAATTTTGCAGAAATTCA+AGG - Chr3:96601078-96601097 None:intergenic 25.0%
!! TCTATTATGTCTGTATTTTC+AGG + Chr3:96601305-96601324 MsG0380017465.01.T01:intron 25.0%
!! TGTTATAAGAATTCTAAAGG+TGG + Chr3:96600526-96600545 MsG0380017465.01.T01:intron 25.0%
!! TTATCAAAACATCTCTTTTG+CGG - Chr3:96598306-96598325 None:intergenic 25.0%
!! TTGATTCTGTCAAGTATTTT+AGG + Chr3:96601443-96601462 MsG0380017465.01.T01:intron 25.0%
!! TTTAGAAATTTTGTTGAGTG+AGG - Chr3:96596645-96596664 None:intergenic 25.0%
!!! ACTGTTTCTATTGAGTTATT+TGG - Chr3:96594822-96594841 None:intergenic 25.0%
!!! ATTATATTTTAACCTGTGAG+GGG - Chr3:96594378-96594397 None:intergenic 25.0%
!!! CAAAAAGTCTTTTTTCTAAG+TGG - Chr3:96600912-96600931 None:intergenic 25.0%
!!! CTGTTTCTATTGAGTTATTT+GGG - Chr3:96594821-96594840 None:intergenic 25.0%
!!! GGACAATTTTTTAGTCAAAT+GGG - Chr3:96596062-96596081 None:intergenic 25.0%
!!! GTTTCATTTTTCCTTTGTTT+AGG - Chr3:96594652-96594671 None:intergenic 25.0%
!!! TGACATTTTTTCCTAAACAA+AGG + Chr3:96594638-96594657 MsG0380017465.01.T01:intron 25.0%
AAAATCTATGTCTCACTTGT+TGG - Chr3:96594892-96594911 None:intergenic 30.0%
AAATCAATGTTGCACGAATA+AGG - Chr3:96599065-96599084 None:intergenic 30.0%
AAATGTGAAAAAAGCAAACG+GGG + Chr3:96596295-96596314 MsG0380017465.01.T01:CDS 30.0%
AAATTGGGGGAAAAAAGAAA+AGG - Chr3:96602381-96602400 None:intergenic 30.0%
AATGATCACTATTACAAAGC+AGG + Chr3:96597594-96597613 MsG0380017465.01.T01:intron 30.0%
ACAACTGATGAAGAATTTCT+TGG - Chr3:96598273-96598292 None:intergenic 30.0%
ACAGCCTCAATTATTGTATT+TGG - Chr3:96599892-96599911 None:intergenic 30.0%
ACATATTAGTAGTCTGAGAA+AGG + Chr3:96599951-96599970 MsG0380017465.01.T01:CDS 30.0%
AGCCTCAATTATTGTATTTG+GGG - Chr3:96599890-96599909 None:intergenic 30.0%
AGGATGATATCATTATGCTT+AGG - Chr3:96602856-96602875 None:intergenic 30.0%
AGTAGTAATAATTCCAGCAT+AGG - Chr3:96598564-96598583 None:intergenic 30.0%
ATAAAGATTCAGTGGTTACA+TGG - Chr3:96601877-96601896 None:intergenic 30.0%
ATCAAGGTAATTGAAAACAC+TGG - Chr3:96600004-96600023 None:intergenic 30.0%
ATCCCCAAATACAATAATTG+AGG + Chr3:96599885-96599904 MsG0380017465.01.T01:CDS 30.0%
ATTAACACAGATTACATCTG+AGG + Chr3:96600340-96600359 MsG0380017465.01.T01:intron 30.0%
ATTTGAAAAGGGGTTTATTG+AGG - Chr3:96596084-96596103 None:intergenic 30.0%
ATTTGGTTAAAGCTCATGAA+TGG + Chr3:96600084-96600103 MsG0380017465.01.T01:CDS 30.0%
CAATGAATGAAATTAGGGTT+AGG - Chr3:96597851-96597870 None:intergenic 30.0%
CACTAGTTAATGACCTTAAA+TGG + Chr3:96595979-96595998 MsG0380017465.01.T01:intron 30.0%
CAGCCTCAATTATTGTATTT+GGG - Chr3:96599891-96599910 None:intergenic 30.0%
CTACAACAACAAAAGAGATT+TGG + Chr3:96600762-96600781 MsG0380017465.01.T01:CDS 30.0%
CTACCTAAATTATCTTTGGT+AGG + Chr3:96595202-96595221 MsG0380017465.01.T01:intron 30.0%
CTGGATAAGAAAAAGAATGT+AGG + Chr3:96598407-96598426 MsG0380017465.01.T01:intron 30.0%
GAAATGTGAAAAAAGCAAAC+GGG + Chr3:96596294-96596313 MsG0380017465.01.T01:CDS 30.0%
GAATAAAGAAAGAGACACAA+AGG + Chr3:96597732-96597751 MsG0380017465.01.T01:intron 30.0%
GAGAGTGGATATTTGAAAAT+AGG + Chr3:96602877-96602896 MsG0380017465.01.T01:CDS 30.0%
GCACGAATAAGGATTAAAAT+TGG - Chr3:96599054-96599073 None:intergenic 30.0%
GCATCTAGTAATTTGAAAAG+GGG - Chr3:96596094-96596113 None:intergenic 30.0%
GTAGTAATAATTCCAGCATA+GGG - Chr3:96598563-96598582 None:intergenic 30.0%
GTTGTTAGAAAATGTAGTTG+TGG + Chr3:96594174-96594193 MsG0380017465.01.T01:intron 30.0%
TAGTAATAATTCCAGCATAG+GGG - Chr3:96598562-96598581 None:intergenic 30.0%
TATGTATTCATTTCAAAGGG+AGG - Chr3:96602592-96602611 None:intergenic 30.0%
TATTCTTCCTATCATCAGAT+TGG + Chr3:96601594-96601613 MsG0380017465.01.T01:intron 30.0%
TCAAAACAGAGAGATTGTTT+GGG + Chr3:96599200-96599219 MsG0380017465.01.T01:intron 30.0%
TCACATCAAGTTACCATTTA+AGG - Chr3:96595995-96596014 None:intergenic 30.0%
TCATTATTTGCGTGTTTCAA+AGG - Chr3:96599003-96599022 None:intergenic 30.0%
TCTAACAAATATCGTTCAGA+TGG - Chr3:96595487-96595506 None:intergenic 30.0%
TGCATTGAGTGCAATAAAAA+AGG + Chr3:96602625-96602644 MsG0380017465.01.T01:intron 30.0%
TGTTTATATATAGGGATGGA+GGG - Chr3:96596039-96596058 None:intergenic 30.0%
TGTTTCAAACATTCATTTGC+AGG - Chr3:96595412-96595431 None:intergenic 30.0%
TTCCAAAAGGTAAAGCTATT+TGG + Chr3:96600067-96600086 MsG0380017465.01.T01:CDS 30.0%
TTCTTTGTTCCTACTGAAAA+GGG + Chr3:96601983-96602002 MsG0380017465.01.T01:intron 30.0%
TTGCCTACCAAAGATAATTT+AGG - Chr3:96595208-96595227 None:intergenic 30.0%
TTTACTTTGCTCCTTCTTAT+CGG - Chr3:96594754-96594773 None:intergenic 30.0%
TTTCAGAGTGAAAAAGCAAA+AGG + Chr3:96594139-96594158 MsG0380017465.01.T01:intron 30.0%
TTTCTATTGAGTTATTTGGG+TGG - Chr3:96594818-96594837 None:intergenic 30.0%
TTTCTTTGTTCCTACTGAAA+AGG + Chr3:96601982-96602001 MsG0380017465.01.T01:intron 30.0%
TTTGAAAAGGGGTTTATTGA+GGG - Chr3:96596083-96596102 None:intergenic 30.0%
! AAAGAATGCATTTAGAGCAA+TGG - Chr3:96597446-96597465 None:intergenic 30.0%
! AAATTAGCAGCTTTTGGTAA+AGG - Chr3:96600853-96600872 None:intergenic 30.0%
! AATCATGTTTTCCCTCTTTA+TGG + Chr3:96598105-96598124 MsG0380017465.01.T01:intron 30.0%
! AGGAGTAGATATATGCATTT+TGG + Chr3:96601352-96601371 MsG0380017465.01.T01:intron 30.0%
! ATAATTCGAAAATGACGGAA+AGG + Chr3:96596599-96596618 MsG0380017465.01.T01:intron 30.0%
! ATGAGTTTTCCTACTTCAAT+GGG + Chr3:96599245-96599264 MsG0380017465.01.T01:intron 30.0%
! CATATGAAAACTTCAGGTTT+AGG - Chr3:96602751-96602770 None:intergenic 30.0%
! CATTTAGAGCAATGGTTAAA+CGG - Chr3:96597438-96597457 None:intergenic 30.0%
! CCTTGATTTTTGTAAGAAAC+GGG + Chr3:96601620-96601639 MsG0380017465.01.T01:CDS 30.0%
! CTCACACTTACTATTCATTT+TGG - Chr3:96595629-96595648 None:intergenic 30.0%
! CTTGATTTTTGTAAGAAACG+GGG + Chr3:96601621-96601640 MsG0380017465.01.T01:CDS 30.0%
! GTTGATGAAAGTAAAAGACA+AGG - Chr3:96602228-96602247 None:intergenic 30.0%
! TATGAGTTTTCCTACTTCAA+TGG + Chr3:96599244-96599263 MsG0380017465.01.T01:intron 30.0%
! TTACCAAAAGCTGCTAATTT+TGG + Chr3:96600853-96600872 MsG0380017465.01.T01:CDS 30.0%
! TTCTTTTTCTTATCCAGTGA+CGG - Chr3:96598404-96598423 None:intergenic 30.0%
! TTGACAACTTTTTGATCTGA+TGG - Chr3:96597547-96597566 None:intergenic 30.0%
! TTTTCAAATATCCACTCTCA+AGG - Chr3:96602876-96602895 None:intergenic 30.0%
! TTTTTCCCCCAATTTTCATT+AGG + Chr3:96602386-96602405 MsG0380017465.01.T01:intron 30.0%
!! AAATAGAGCTTTAAAGACCA+TGG + Chr3:96602140-96602159 MsG0380017465.01.T01:CDS 30.0%
!! AACCAAATAGCTTTACCTTT+TGG - Chr3:96600072-96600091 None:intergenic 30.0%
!! AATAGAGCTTTAAAGACCAT+GGG + Chr3:96602141-96602160 MsG0380017465.01.T01:CDS 30.0%
!! ATGGTCTTTAAAGCTCTATT+TGG - Chr3:96602141-96602160 None:intergenic 30.0%
!! CTGTTGTTGGTTGATTTTAA+TGG + Chr3:96594203-96594222 MsG0380017465.01.T01:intron 30.0%
!! GCTTTTTCCTTTGACATAAT+TGG - Chr3:96600393-96600412 None:intergenic 30.0%
!! GGTTAATTCGTTTGTTGTTT+GGG - Chr3:96595466-96595485 None:intergenic 30.0%
!! TGAAAGTGTTTCAAAGAACA+AGG - Chr3:96599540-96599559 None:intergenic 30.0%
!! TGGTTAATTCGTTTGTTGTT+TGG - Chr3:96595467-96595486 None:intergenic 30.0%
!! TTAATTTGCTACTTATGCAG+TGG + Chr3:96599166-96599185 MsG0380017465.01.T01:intron 30.0%
!! TTTCTCAACTTGCTACATAT+GGG + Chr3:96601644-96601663 MsG0380017465.01.T01:CDS 30.0%
!!! CAGTTGTTTTTCTACGAATT+TGG + Chr3:96598717-96598736 MsG0380017465.01.T01:intron 30.0%
!!! GAGAACCTATTTTTGTAGAA+AGG + Chr3:96600463-96600482 MsG0380017465.01.T01:intron 30.0%
!!! GGGACAATTTTTTAGTCAAA+TGG - Chr3:96596063-96596082 None:intergenic 30.0%
!!! TTTTGGCTTTTTATGGTACT+TGG - Chr3:96595092-96595111 None:intergenic 30.0%
AAACGGGGTATATATAAGGA+CGG + Chr3:96596310-96596329 MsG0380017465.01.T01:intron 35.0%
AAAGAAAGAGACACAAAGGA+GGG + Chr3:96597736-96597755 MsG0380017465.01.T01:intron 35.0%
AAATGTGTGCATCAGAACTA+TGG - Chr3:96602689-96602708 None:intergenic 35.0%
AACTCATAGACTCGTTATTC+TGG - Chr3:96599232-96599251 None:intergenic 35.0%
AAGAAGAAGATTTGATGCAC+AGG + Chr3:96600486-96600505 MsG0380017465.01.T01:intron 35.0%
AAGATGCTCTTCTCAACATA+AGG + Chr3:96594688-96594707 MsG0380017465.01.T01:intron 35.0%
AAGCAAACGGGGTATATATA+AGG + Chr3:96596306-96596325 MsG0380017465.01.T01:intron 35.0%
AATGATATCATCCTTGAGAG+TGG + Chr3:96602862-96602881 MsG0380017465.01.T01:CDS 35.0%
AATTACCAGATCTCGAAAAC+AGG - Chr3:96596752-96596771 None:intergenic 35.0%
AATTCACACAGAGACACATA+AGG - Chr3:96601777-96601796 None:intergenic 35.0%
ACAACAACAACAACATCAGT+GGG - Chr3:96594001-96594020 None:intergenic 35.0%
ACAACGTCCTTTAGATTGTT+TGG - Chr3:96594793-96594812 None:intergenic 35.0%
ACACATGCCAATTATGTCAA+AGG + Chr3:96600383-96600402 MsG0380017465.01.T01:intron 35.0%
ACGTGTGAACAAATCAATCA+AGG - Chr3:96599917-96599936 None:intergenic 35.0%
ACTCAATGGAAATCAACAGT+AGG + Chr3:96599642-96599661 MsG0380017465.01.T01:intron 35.0%
ACTTGTTTCAGCGGATATTT+CGG + Chr3:96599309-96599328 MsG0380017465.01.T01:intron 35.0%
AGAAGAAGATTTGATGCACA+GGG + Chr3:96600487-96600506 MsG0380017465.01.T01:intron 35.0%
AGAGTGAAATGGGTAATCAA+TGG - Chr3:96594063-96594082 None:intergenic 35.0%
AGATGCTCTTCTCAACATAA+GGG + Chr3:96594689-96594708 MsG0380017465.01.T01:intron 35.0%
AGGGTTAGGGTTTAAGAATT+GGG - Chr3:96597837-96597856 None:intergenic 35.0%
AGGTCAAGTATTTATCGATG+TGG - Chr3:96594866-96594885 None:intergenic 35.0%
AGTCATACGTAAACAGATCA+AGG - Chr3:96600020-96600039 None:intergenic 35.0%
AGTGGAGTATACTCTATCTA+AGG - Chr3:96595351-96595370 None:intergenic 35.0%
ATATCCGCTGAAACAAGTTT+AGG - Chr3:96599307-96599326 None:intergenic 35.0%
ATCATCATGCCATATCAACT+CGG + Chr3:96595275-96595294 MsG0380017465.01.T01:intron 35.0%
ATCTATAAGAGAATTCGGCA+GGG - Chr3:96601200-96601219 None:intergenic 35.0%
ATGTGACTGATAAATGGCAT+TGG - Chr3:96595386-96595405 None:intergenic 35.0%
ATTGCTTCCACCATATAAAC+GGG - Chr3:96598944-96598963 None:intergenic 35.0%
CAAAACAGAGAGATTGTTTG+GGG + Chr3:96599201-96599220 MsG0380017465.01.T01:intron 35.0%
CAAAATGAGCAACTTTGCAT+TGG + Chr3:96595820-96595839 MsG0380017465.01.T01:intron 35.0%
CAAACTGGGAAAAAGTTGAA+GGG + Chr3:96600953-96600972 MsG0380017465.01.T01:CDS 35.0%
CAAAGAAAGAAGCTCAAAGT+CGG - Chr3:96599103-96599122 None:intergenic 35.0%
CACTGAATGCAAGAAATTTC+AGG + Chr3:96602515-96602534 MsG0380017465.01.T01:CDS 35.0%
CAGTTGATCCAATTCTATAG+TGG - Chr3:96595045-96595064 None:intergenic 35.0%
CATGAACCAACTATTCCAAA+AGG + Chr3:96600054-96600073 MsG0380017465.01.T01:CDS 35.0%
CCAATATCTCATGGTAAACA+AGG - Chr3:96601506-96601525 None:intergenic 35.0%
CCCGTTTCTTACAAAAATCA+AGG - Chr3:96601623-96601642 None:intergenic 35.0%
CTCGGGATATAGTAAACTAT+AGG + Chr3:96596958-96596977 MsG0380017465.01.T01:intron 35.0%
CTTCATGCTTTACTTACTTC+TGG - Chr3:96596785-96596804 None:intergenic 35.0%
GAAATACAGCAGAAACTCAA+TGG + Chr3:96599628-96599647 MsG0380017465.01.T01:intron 35.0%
GATATCATTATGCTTAGGTG+TGG - Chr3:96602851-96602870 None:intergenic 35.0%
GATGCACACATTTCAAAGAA+TGG + Chr3:96602696-96602715 MsG0380017465.01.T01:CDS 35.0%
GATTGCTTCCACCATATAAA+CGG - Chr3:96598945-96598964 None:intergenic 35.0%
GCAGGTCATGAACAATAAAA+GGG - Chr3:96598856-96598875 None:intergenic 35.0%
GCTTAGAATTGGAAGATACA+GGG + Chr3:96599365-96599384 MsG0380017465.01.T01:intron 35.0%
GGGAAAAAAGAAAAGGAAGA+AGG - Chr3:96602374-96602393 None:intergenic 35.0%
GGGGTATATCATTATCTTAC+TGG - Chr3:96595330-96595349 None:intergenic 35.0%
GTCAAAACAGAGAGATTGTT+TGG + Chr3:96599199-96599218 MsG0380017465.01.T01:intron 35.0%
GTGGAGTATACTCTATCTAA+GGG - Chr3:96595350-96595369 None:intergenic 35.0%
GTGTTTATATATAGGGATGG+AGG - Chr3:96596040-96596059 None:intergenic 35.0%
TAAAGAAAGAGACACAAAGG+AGG + Chr3:96597735-96597754 MsG0380017465.01.T01:intron 35.0%
TAACTTACCCGTTTATATGG+TGG + Chr3:96598934-96598953 MsG0380017465.01.T01:CDS 35.0%
TACGAAAAGACGGAAAATGA+CGG + Chr3:96599446-96599465 MsG0380017465.01.T01:intron 35.0%
TAGATCAAGAGTAAGTTCAG+TGG + Chr3:96601215-96601234 MsG0380017465.01.T01:intron 35.0%
TAGGGTTAGGGTTTAAGAAT+TGG - Chr3:96597838-96597857 None:intergenic 35.0%
TATCCGCTGAAACAAGTTTA+GGG - Chr3:96599306-96599325 None:intergenic 35.0%
TCAAGTATTTATCGATGTGG+TGG - Chr3:96594863-96594882 None:intergenic 35.0%
TCGTAACTTACCCGTTTATA+TGG + Chr3:96598931-96598950 MsG0380017465.01.T01:CDS 35.0%
TGAAAGTGAATAAGCTGTTC+TGG + Chr3:96601153-96601172 MsG0380017465.01.T01:intron 35.0%
TGCTTAGAATTGGAAGATAC+AGG + Chr3:96599364-96599383 MsG0380017465.01.T01:intron 35.0%
TGGAGTATACTCTATCTAAG+GGG - Chr3:96595349-96595368 None:intergenic 35.0%
TGGCCAACCTAATGAAAATT+GGG - Chr3:96602396-96602415 None:intergenic 35.0%
TGGGTGTTTATATATAGGGA+TGG - Chr3:96596043-96596062 None:intergenic 35.0%
TTAACTTCTTACAGGAAGGA+GGG - Chr3:96597706-96597725 None:intergenic 35.0%
TTCTTTCTTGCCAAATCACA+CGG + Chr3:96594937-96594956 MsG0380017465.01.T01:intron 35.0%
TTGGCCAACCTAATGAAAAT+TGG - Chr3:96602397-96602416 None:intergenic 35.0%
! AAGGTATCCAATCTGATGAT+AGG - Chr3:96601604-96601623 None:intergenic 35.0%
! AGAAATTTCAGGAGTGTGAA+AGG + Chr3:96602526-96602545 MsG0380017465.01.T01:CDS 35.0%
! ATTCCCTAAACTTGTTTCAG+CGG + Chr3:96599300-96599319 MsG0380017465.01.T01:intron 35.0%
! ATTTCTTTTAAGCGGCATAC+AGG - Chr3:96600811-96600830 None:intergenic 35.0%
! CAATGCAAAGTTGCTCATTT+TGG - Chr3:96595822-96595841 None:intergenic 35.0%
! CCTTGTTTACCATGAGATAT+TGG + Chr3:96601503-96601522 MsG0380017465.01.T01:intron 35.0%
! TAATCATCCCCTTTTCTTGA+AGG - Chr3:96601678-96601697 None:intergenic 35.0%
! TATAGCGGTCTTGACTTTTA+GGG - Chr3:96596489-96596508 None:intergenic 35.0%
! TATGTCTCACTTGTTGGATA+AGG - Chr3:96594886-96594905 None:intergenic 35.0%
! TGATCAATCGACTTACAAGA+AGG + Chr3:96599509-96599528 MsG0380017465.01.T01:intron 35.0%
! TGTTTTTCTACGAATTTGGC+AGG + Chr3:96598721-96598740 MsG0380017465.01.T01:intron 35.0%
! TTATAGCGGTCTTGACTTTT+AGG - Chr3:96596490-96596509 None:intergenic 35.0%
! TTTATATGGTGGAAGCAATC+TGG + Chr3:96598945-96598964 MsG0380017465.01.T01:CDS 35.0%
! TTTTATCGTTTATCCCATCC+TGG - Chr3:96599822-96599841 None:intergenic 35.0%
!! AAGACTTTTTGAGCGTCTTA+TGG + Chr3:96600921-96600940 MsG0380017465.01.T01:CDS 35.0%
!! AGATATTGATGACGATGAAG+AGG + Chr3:96599687-96599706 MsG0380017465.01.T01:CDS 35.0%
!! AGGTTGATGTGACTGATAAA+TGG - Chr3:96595392-96595411 None:intergenic 35.0%
!! AGTTCTGAAGATGCAATTTG+TGG - Chr3:96601265-96601284 None:intergenic 35.0%
!! AGTTTGCTTTTGACGTTTCT+TGG + Chr3:96599469-96599488 MsG0380017465.01.T01:intron 35.0%
!! ATGACTGTTGTTTCTTCTAG+TGG + Chr3:96600693-96600712 MsG0380017465.01.T01:intron 35.0%
!! GTTTCTCAACTTGCTACATA+TGG + Chr3:96601643-96601662 MsG0380017465.01.T01:CDS 35.0%
!! GTTTGCTTTTGACGTTTCTT+GGG + Chr3:96599470-96599489 MsG0380017465.01.T01:intron 35.0%
!! TAATTCGTTTGTTGTTTGGG+AGG - Chr3:96595463-96595482 None:intergenic 35.0%
!!! GCTTTACCTTTTGGAATAGT+TGG - Chr3:96600063-96600082 None:intergenic 35.0%
!!! TGCAGATTTTCGTTTTAGCT+TGG - Chr3:96595248-96595267 None:intergenic 35.0%
AAATGACATACAACCGTCAC+TGG + Chr3:96598388-96598407 MsG0380017465.01.T01:intron 40.0%
AACACAGATTACATCTGAGG+AGG + Chr3:96600343-96600362 MsG0380017465.01.T01:intron 40.0%
ACACACATATCAGCAAGTAG+GGG - Chr3:96598908-96598927 None:intergenic 40.0%
ACACATTTCAAAGAATGGCG+AGG + Chr3:96602701-96602720 MsG0380017465.01.T01:CDS 40.0%
ACGCCACAACATGAACAAAA+AGG - Chr3:96600434-96600453 None:intergenic 40.0%
ACTCGTGCTAGGAAAAAGAT+TGG - Chr3:96599341-96599360 None:intergenic 40.0%
AGAACACTTCACCGATAAGA+AGG + Chr3:96594740-96594759 MsG0380017465.01.T01:intron 40.0%
AGGACCATTGAAAAAGAGAG+CGG + Chr3:96602081-96602100 MsG0380017465.01.T01:CDS 40.0%
AGGGAACGAGAATCTTGATA+AGG + Chr3:96600972-96600991 MsG0380017465.01.T01:CDS 40.0%
AGGTAATTGAAAACACTGGC+AGG - Chr3:96600000-96600019 None:intergenic 40.0%
AGGTCATTAACTAGTGCTCT+AGG - Chr3:96595975-96595994 None:intergenic 40.0%
AGGTGGGAAAATTACGTTCA+AGG + Chr3:96600543-96600562 MsG0380017465.01.T01:intron 40.0%
ATCATTATGCTTAGGTGTGG+AGG - Chr3:96602848-96602867 None:intergenic 40.0%
ATCCCATTGGGTGACTATAA+AGG - Chr3:96602257-96602276 None:intergenic 40.0%
ATGGACTTTCCCATTGAAGT+AGG - Chr3:96599257-96599276 None:intergenic 40.0%
CACAACAACAACAACATCAG+TGG - Chr3:96594002-96594021 None:intergenic 40.0%
CACACACATATCAGCAAGTA+GGG - Chr3:96598909-96598928 None:intergenic 40.0%
CACGAGTTCATGCTTAGAAT+TGG + Chr3:96599354-96599373 MsG0380017465.01.T01:intron 40.0%
CAGTAGTCTCCATCAAAGTA+TGG - Chr3:96602036-96602055 None:intergenic 40.0%
CATACTTTGATGGAGACTAC+TGG + Chr3:96602034-96602053 MsG0380017465.01.T01:CDS 40.0%
CATCATTATGCTCATCTGTG+AGG - Chr3:96595014-96595033 None:intergenic 40.0%
CATGGTAAACAAGGTACGAA+GGG - Chr3:96601497-96601516 None:intergenic 40.0%
CCAAAAGATATTGCCTACCA+GGG + Chr3:96602413-96602432 MsG0380017465.01.T01:CDS 40.0%
CCACATGTAAGTAATCCAGT+AGG + Chr3:96598336-96598355 MsG0380017465.01.T01:intron 40.0%
CCTACTGGATTACTTACATG+TGG - Chr3:96598339-96598358 None:intergenic 40.0%
CGCCACAACATGAACAAAAA+GGG - Chr3:96600433-96600452 None:intergenic 40.0%
CTACTGGTGTGGTTATGTTA+TGG + Chr3:96602050-96602069 MsG0380017465.01.T01:CDS 40.0%
CTCACAGATGAGCATAATGA+TGG + Chr3:96595012-96595031 MsG0380017465.01.T01:intron 40.0%
CTGCTTAACTTCTTACAGGA+AGG - Chr3:96597710-96597729 None:intergenic 40.0%
CTTAACTTCTTACAGGAAGG+AGG - Chr3:96597707-96597726 None:intergenic 40.0%
GAGAAAGAAAGACTGACCAA+CGG - Chr3:96601755-96601774 None:intergenic 40.0%
GATCACTATTACAAAGCAGG+AGG + Chr3:96597597-96597616 MsG0380017465.01.T01:intron 40.0%
GATCTATAAGAGAATTCGGC+AGG - Chr3:96601201-96601220 None:intergenic 40.0%
GATGCTCTTCTCAACATAAG+GGG + Chr3:96594690-96594709 MsG0380017465.01.T01:intron 40.0%
GCAAACTGGGAAAAAGTTGA+AGG + Chr3:96600952-96600971 MsG0380017465.01.T01:CDS 40.0%
GCCAACCTAATGAAAATTGG+GGG - Chr3:96602394-96602413 None:intergenic 40.0%
GGCAGGTCATGAACAATAAA+AGG - Chr3:96598857-96598876 None:intergenic 40.0%
GGCCAACCTAATGAAAATTG+GGG - Chr3:96602395-96602414 None:intergenic 40.0%
GGGTCTGAAAGTAAAGTAAG+AGG - Chr3:96594358-96594377 None:intergenic 40.0%
GGGTTAGGGTTTAAGAATTG+GGG - Chr3:96597836-96597855 None:intergenic 40.0%
GGTCATTAACTAGTGCTCTA+GGG - Chr3:96595974-96595993 None:intergenic 40.0%
GGTGGGAAAATTACGTTCAA+GGG + Chr3:96600544-96600563 MsG0380017465.01.T01:intron 40.0%
GTAAGAGGAAAAGCTGACAA+AGG - Chr3:96594343-96594362 None:intergenic 40.0%
GTCATTAACTAGTGCTCTAG+GGG - Chr3:96595973-96595992 None:intergenic 40.0%
GTGAAATGGGTAATCAATGG+CGG - Chr3:96594060-96594079 None:intergenic 40.0%
GTGGGAAAATTACGTTCAAG+GGG + Chr3:96600545-96600564 MsG0380017465.01.T01:intron 40.0%
GTTATTATGGCGTTCCAGAA+GGG + Chr3:96598819-96598838 MsG0380017465.01.T01:CDS 40.0%
TAATCCAGTAGGATTCTCCA+CGG + Chr3:96598347-96598366 MsG0380017465.01.T01:intron 40.0%
TAATTGAAAACACTGGCAGG+TGG - Chr3:96599997-96600016 None:intergenic 40.0%
TATGGAAGAGAGAGCAAACT+GGG + Chr3:96600939-96600958 MsG0380017465.01.T01:CDS 40.0%
TATTGTTCATGAGGGTGAAG+AGG + Chr3:96599771-96599790 MsG0380017465.01.T01:CDS 40.0%
TCAGCGTCCAAACAATCTAA+AGG + Chr3:96594783-96594802 MsG0380017465.01.T01:intron 40.0%
TCATGGTAAACAAGGTACGA+AGG - Chr3:96601498-96601517 None:intergenic 40.0%
TCATTATGCTTAGGTGTGGA+GGG - Chr3:96602847-96602866 None:intergenic 40.0%
TCCCATTGGGTGACTATAAA+GGG - Chr3:96602256-96602275 None:intergenic 40.0%
TCCCTTTATAGTCACCCAAT+GGG + Chr3:96602252-96602271 MsG0380017465.01.T01:intron 40.0%
TCCTCTGCTTAACTTCTTAC+AGG - Chr3:96597714-96597733 None:intergenic 40.0%
TCCTGTAAGAAGTTAAGCAG+AGG + Chr3:96597710-96597729 MsG0380017465.01.T01:intron 40.0%
TCTCGTTTGCCATACTTTGA+TGG + Chr3:96602024-96602043 MsG0380017465.01.T01:CDS 40.0%
TCTGAGAAAGGAATCTGTTC+AGG + Chr3:96599963-96599982 MsG0380017465.01.T01:CDS 40.0%
TCTTCTGTTCAGCAGATTGA+AGG + Chr3:96601332-96601351 MsG0380017465.01.T01:intron 40.0%
TCTTTCTTGCCAAATCACAC+GGG + Chr3:96594938-96594957 MsG0380017465.01.T01:intron 40.0%
TCTTTGGCAGTGTCTTTAGA+AGG - Chr3:96602177-96602196 None:intergenic 40.0%
TGCTACAACCTACGAAAAGA+CGG + Chr3:96599436-96599455 MsG0380017465.01.T01:intron 40.0%
TGGATTACTTACATGTGGAC+TGG - Chr3:96598334-96598353 None:intergenic 40.0%
TTATGGAAGAGAGAGCAAAC+TGG + Chr3:96600938-96600957 MsG0380017465.01.T01:CDS 40.0%
TTCCCTTTATAGTCACCCAA+TGG + Chr3:96602251-96602270 MsG0380017465.01.T01:intron 40.0%
TTCCTTAACATGTGCCCTTA+AGG - Chr3:96595798-96595817 None:intergenic 40.0%
TTGCATCACCAGAATGTCTT+TGG - Chr3:96602193-96602212 None:intergenic 40.0%
TTGGTAGGCAACATGTTCAA+AGG + Chr3:96595217-96595236 MsG0380017465.01.T01:intron 40.0%
! AACATGAACAAAAAGGGCAC+TGG - Chr3:96600427-96600446 None:intergenic 40.0%
! AGCTATGATGAAGTTTTCCC+TGG - Chr3:96602433-96602452 None:intergenic 40.0%
! ATGATGAAGTTTTCCCTGGT+AGG - Chr3:96602429-96602448 None:intergenic 40.0%
! ATGGTACTTGGTTCGTGATT+GGG - Chr3:96595080-96595099 None:intergenic 40.0%
! ATGTGTACACAACGCTGATT+TGG - Chr3:96601415-96601434 None:intergenic 40.0%
! ATTTGCTACTTATGCAGTGG+AGG + Chr3:96599169-96599188 MsG0380017465.01.T01:intron 40.0%
! CATGCTAACTTGTGCCTTAA+GGG + Chr3:96595781-96595800 MsG0380017465.01.T01:intron 40.0%
! CTGAACTTGGTGGGAATATT+TGG + Chr3:96598238-96598257 MsG0380017465.01.T01:CDS 40.0%
! GAGTTTTCTGATTGCATTCG+AGG - Chr3:96594458-96594477 None:intergenic 40.0%
! GCACCAAAATTAGCAGCTTT+TGG - Chr3:96600859-96600878 None:intergenic 40.0%
! GTGACGGTTGTATGTCATTT+CGG - Chr3:96598388-96598407 None:intergenic 40.0%
! GTTGTGGAGTTTTCTGTTGT+TGG + Chr3:96594190-96594209 MsG0380017465.01.T01:intron 40.0%
! TATGGTACTTGGTTCGTGAT+TGG - Chr3:96595081-96595100 None:intergenic 40.0%
! TCATGCTAACTTGTGCCTTA+AGG + Chr3:96595780-96595799 MsG0380017465.01.T01:intron 40.0%
! TCCCCCAATTTTCATTAGGT+TGG + Chr3:96602390-96602409 MsG0380017465.01.T01:intron 40.0%
! TCTTTTCGTAGGTTGTAGCA+TGG - Chr3:96599436-96599455 None:intergenic 40.0%
! TGACGGTTGTATGTCATTTC+GGG - Chr3:96598387-96598406 None:intergenic 40.0%
! TGCCCTTTTTGTTCATGTTG+TGG + Chr3:96600428-96600447 MsG0380017465.01.T01:intron 40.0%
! TTTTCTACGAATTTGGCAGG+AGG + Chr3:96598724-96598743 MsG0380017465.01.T01:intron 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG - Chr3:96595905-96595924 None:intergenic 40.0%
!! ATGTTAACTTGTGCCCTCAA+GGG - Chr3:96595904-96595923 None:intergenic 40.0%
!! ATTTTGGTATACGTCGAGTG+TGG - Chr3:96595613-96595632 None:intergenic 40.0%
!! GTCATTTTCCGTCTTTTCGT+AGG - Chr3:96599447-96599466 None:intergenic 40.0%
!! GTTCTGAAAATCCAACTCCT+GGG - Chr3:96599400-96599419 None:intergenic 40.0%
!! TGTTCTGAAAATCCAACTCC+TGG - Chr3:96599401-96599420 None:intergenic 40.0%
!!! TCTCTGTGTGTTTTTGGATG+TGG - Chr3:96595157-96595176 None:intergenic 40.0%
!!! TGTGTGTTTTTGGATGTGGT+GGG - Chr3:96595153-96595172 None:intergenic 40.0%
!!! TTGGATTGTGTGCTGTTTTC+AGG + Chr3:96602804-96602823 MsG0380017465.01.T01:intron 40.0%
ACACATATCAGCAAGTAGGG+GGG - Chr3:96598906-96598925 None:intergenic 45.0%
ACATGGTGTCTTAATCGACG+AGG - Chr3:96595182-96595201 None:intergenic 45.0%
ACCATTGAAAAAGAGAGCGG+AGG + Chr3:96602084-96602103 MsG0380017465.01.T01:CDS 45.0%
AGAATGATAAGCTACGCCGT+TGG + Chr3:96601736-96601755 MsG0380017465.01.T01:CDS 45.0%
AGACACTGCCAAAGACATTC+TGG + Chr3:96602182-96602201 MsG0380017465.01.T01:CDS 45.0%
AGCTATGCAGCAGAGTGAAA+TGG - Chr3:96594074-96594093 None:intergenic 45.0%
AGCTGAAAAGATGCTTGCGA+AGG + Chr3:96598212-96598231 MsG0380017465.01.T01:CDS 45.0%
ATACAGGGCGAAATAAACCC+AGG + Chr3:96599380-96599399 MsG0380017465.01.T01:intron 45.0%
ATCAACAGTAGGCTACTCTC+AGG + Chr3:96599653-96599672 MsG0380017465.01.T01:intron 45.0%
ATTACATCTGAGGAGGAAGC+AGG + Chr3:96600350-96600369 MsG0380017465.01.T01:intron 45.0%
CAAACGAGAAGTTGTCACCT+TGG - Chr3:96602013-96602032 None:intergenic 45.0%
CACACATATCAGCAAGTAGG+GGG - Chr3:96598907-96598926 None:intergenic 45.0%
CAGTTAGAGACTATCGAGTC+TGG + Chr3:96599572-96599591 MsG0380017465.01.T01:intron 45.0%
CATGGTGTCTTAATCGACGA+GGG - Chr3:96595181-96595200 None:intergenic 45.0%
CATTATGCTCATCTGTGAGG+TGG - Chr3:96595011-96595030 None:intergenic 45.0%
CCACTCTTTGTTCTTCTCTC+AGG - Chr3:96601469-96601488 None:intergenic 45.0%
CCAGATTCTAAGCCTTTCGA+GGG - Chr3:96599605-96599624 None:intergenic 45.0%
CCTGAGAGAAGAACAAAGAG+TGG + Chr3:96601466-96601485 MsG0380017465.01.T01:intron 45.0%
CCTGTGCTCCTTCAAGAAAA+GGG + Chr3:96601667-96601686 MsG0380017465.01.T01:CDS 45.0%
CGGCGTAGCTTATCATTCTT+CGG - Chr3:96601735-96601754 None:intergenic 45.0%
CTACTGAAAAGGGAACTCCA+AGG + Chr3:96601993-96602012 MsG0380017465.01.T01:intron 45.0%
CTGTGCTCCTTCAAGAAAAG+GGG + Chr3:96601668-96601687 MsG0380017465.01.T01:CDS 45.0%
GACGATGAAGAGGACATACA+AGG + Chr3:96599697-96599716 MsG0380017465.01.T01:CDS 45.0%
GCACACACATATCAGCAAGT+AGG - Chr3:96598910-96598929 None:intergenic 45.0%
GCAGGAGGAATATATGAACC+TGG + Chr3:96598739-96598758 MsG0380017465.01.T01:intron 45.0%
GCCAAAAGATATTGCCTACC+AGG + Chr3:96602412-96602431 MsG0380017465.01.T01:CDS 45.0%
GCCATGAAGTGATAGCATCT+GGG + Chr3:96602478-96602497 MsG0380017465.01.T01:CDS 45.0%
GCTATGCAGCAGAGTGAAAT+GGG - Chr3:96594073-96594092 None:intergenic 45.0%
GCTGAAAAGATGCTTGCGAA+GGG + Chr3:96598213-96598232 MsG0380017465.01.T01:CDS 45.0%
GGTTATTATGGCGTTCCAGA+AGG + Chr3:96598818-96598837 MsG0380017465.01.T01:CDS 45.0%
GTAGGCAACATGTTCAAAGG+AGG + Chr3:96595220-96595239 MsG0380017465.01.T01:intron 45.0%
GTTATGTTATGGAAGCAGCC+AGG + Chr3:96602061-96602080 MsG0380017465.01.T01:CDS 45.0%
TATCCCATCCTGGTTGAATC+CGG - Chr3:96599812-96599831 None:intergenic 45.0%
TCCCAGATGCTATCACTTCA+TGG - Chr3:96602482-96602501 None:intergenic 45.0%
TCTAAGCATGAACTCGTGCT+AGG - Chr3:96599352-96599371 None:intergenic 45.0%
TGCCATGAAGTGATAGCATC+TGG + Chr3:96602477-96602496 MsG0380017465.01.T01:CDS 45.0%
TGGAACGCCATAATAACCAG+CGG - Chr3:96598816-96598835 None:intergenic 45.0%
TGTGAGGTGGTTCGAAAAAG+CGG - Chr3:96594998-96595017 None:intergenic 45.0%
TTCTAAGTGGTCACTGAGCA+TGG - Chr3:96600899-96600918 None:intergenic 45.0%
TTCTTGACGCGCCATAAAGA+GGG - Chr3:96598119-96598138 None:intergenic 45.0%
TTGCTACAACCCGTGTGATT+TGG - Chr3:96594950-96594969 None:intergenic 45.0%
TTTACTTTCAGACCCCTCAC+AGG + Chr3:96594363-96594382 MsG0380017465.01.T01:intron 45.0%
TTTATCGATGTGGTGGCTGA+AGG - Chr3:96594856-96594875 None:intergenic 45.0%
TTTGATGGAGACTACTGGTG+TGG + Chr3:96602039-96602058 MsG0380017465.01.T01:CDS 45.0%
! AAATCACACGGGTTGTAGCA+AGG + Chr3:96594949-96594968 MsG0380017465.01.T01:intron 45.0%
! ACTTACCACTGCTGCTTCAA+AGG + Chr3:96598581-96598600 MsG0380017465.01.T01:CDS 45.0%
! CCCTGGTAGGCAATATCTTT+TGG - Chr3:96602416-96602435 None:intergenic 45.0%
! CTTGGAGTTCCCTTTTCAGT+AGG - Chr3:96601995-96602014 None:intergenic 45.0%
! GAGGGTTCTCTGTGTGTTTT+TGG - Chr3:96595163-96595182 None:intergenic 45.0%
! GGCAGTGTCTTTAGAAGGAT+TGG - Chr3:96602172-96602191 None:intergenic 45.0%
! TACTTGGTTCGTGATTGGGT+GGG - Chr3:96595076-96595095 None:intergenic 45.0%
! TCTGATGCCGCTGGTTATTA+TGG + Chr3:96598806-96598825 MsG0380017465.01.T01:CDS 45.0%
! TCTGGAATGATTCCCTCGAA+AGG + Chr3:96599590-96599609 MsG0380017465.01.T01:intron 45.0%
! TGCCTTAAGGGCACATGTTA+AGG + Chr3:96595793-96595812 MsG0380017465.01.T01:intron 45.0%
! TGTTCTGGACATCATTCCAG+AGG + Chr3:96601168-96601187 MsG0380017465.01.T01:intron 45.0%
! TGTTGTTTGGGAGGATGAGT+TGG - Chr3:96595454-96595473 None:intergenic 45.0%
! TTCGGAGTCTTTTGCTCTTC+AGG - Chr3:96601717-96601736 None:intergenic 45.0%
!! ACAAACCTTTGAAGCAGCAG+TGG - Chr3:96598589-96598608 None:intergenic 45.0%
!! ATCGTCCTGTTTTCGAGATC+TGG + Chr3:96596744-96596763 MsG0380017465.01.T01:intron 45.0%
!! CTGATTTGGATTGCCGCATT+CGG - Chr3:96601401-96601420 None:intergenic 45.0%
!! GAGTCGTTTCCGAGTTGATA+TGG - Chr3:96595287-96595306 None:intergenic 45.0%
!! TCTCAACATAAGGGGTGTCA+AGG + Chr3:96594698-96594717 MsG0380017465.01.T01:intron 45.0%
!! TGATAAATGGCATTGGCTGC+TGG - Chr3:96595379-96595398 None:intergenic 45.0%
!! TTTGGGAGGATGAGTTGGTA+AGG - Chr3:96595449-96595468 None:intergenic 45.0%
!!! AGCTGCTAATTTTGGTGCCA+AGG + Chr3:96600861-96600880 MsG0380017465.01.T01:CDS 45.0%
!!! CTGTGTGTTTTTGGATGTGG+TGG - Chr3:96595154-96595173 None:intergenic 45.0%
!!! GCTCTCTTTTTCAATGGTCC+TGG - Chr3:96602082-96602101 None:intergenic 45.0%
!!! GTGTGTTTTTGGATGTGGTG+GGG - Chr3:96595152-96595171 None:intergenic 45.0%
!!! TCCTCCGCTCTCTTTTTCAA+TGG - Chr3:96602088-96602107 None:intergenic 45.0%
!!! AAAGATAAAATTTATTTTTA+TGG + Chr3:96595757-96595776 MsG0380017465.01.T01:intron 5.0%
!!! TTTTTAAATTGTAATATTTT+TGG - Chr3:96595109-96595128 None:intergenic 5.0%
AACAACAGCGTCAGCGATAC+AGG + Chr3:96597768-96597787 MsG0380017465.01.T01:intron 50.0%
ACAGTAGGCTACTCTCAGGA+AGG + Chr3:96599657-96599676 MsG0380017465.01.T01:intron 50.0%
AGAACCGGATTCAACCAGGA+TGG + Chr3:96599805-96599824 MsG0380017465.01.T01:CDS 50.0%
AGAACTGGATTCATCCAGGC+GGG + Chr3:96599724-96599743 MsG0380017465.01.T01:CDS 50.0%
AGCTCCTTAACATGCCCTTG+AGG + Chr3:96595887-96595906 MsG0380017465.01.T01:intron 50.0%
CAGAACTGGATTCATCCAGG+CGG + Chr3:96599723-96599742 MsG0380017465.01.T01:CDS 50.0%
CAGCAGAACTGGATTCATCC+AGG + Chr3:96599720-96599739 MsG0380017465.01.T01:CDS 50.0%
CATGGTTCTTGGCAAGTCCT+TGG - Chr3:96600881-96600900 None:intergenic 50.0%
CCCTCGAAAGGCTTAGAATC+TGG + Chr3:96599602-96599621 MsG0380017465.01.T01:intron 50.0%
CGAGGTGCATACACTATGTC+AGG + Chr3:96602719-96602738 MsG0380017465.01.T01:CDS 50.0%
CGGGGTATATATAAGGACGG+AGG + Chr3:96596313-96596332 MsG0380017465.01.T01:intron 50.0%
GAACCATCATCAGGAGAGCA+AGG - Chr3:96598878-96598897 None:intergenic 50.0%
GAACCGGATTCAACCAGGAT+GGG + Chr3:96599806-96599825 MsG0380017465.01.T01:CDS 50.0%
GACATACAAGGCAGCAGAAC+TGG + Chr3:96599709-96599728 MsG0380017465.01.T01:CDS 50.0%
GAGGACATTCAAGGCAGAAC+CGG + Chr3:96599790-96599809 MsG0380017465.01.T01:CDS 50.0%
GAGGGTGAAGAGGACATTCA+AGG + Chr3:96599781-96599800 MsG0380017465.01.T01:CDS 50.0%
GCCAGATTCTAAGCCTTTCG+AGG - Chr3:96599606-96599625 None:intergenic 50.0%
GCCTGTGCTCCTTCAAGAAA+AGG + Chr3:96601666-96601685 MsG0380017465.01.T01:CDS 50.0%
GCTCCTTAACATGCCCTTGA+GGG + Chr3:96595888-96595907 MsG0380017465.01.T01:intron 50.0%
GGCGAAATAAACCCAGGAGT+TGG + Chr3:96599386-96599405 MsG0380017465.01.T01:intron 50.0%
GTTCTTGACGCGCCATAAAG+AGG - Chr3:96598120-96598139 None:intergenic 50.0%
GTTTCTAAGTCTGATGCCGC+TGG + Chr3:96598797-96598816 MsG0380017465.01.T01:CDS 50.0%
TGAGCAATTTGCCCCTATGC+TGG + Chr3:96598548-96598567 MsG0380017465.01.T01:CDS 50.0%
TGATAGCATCTGGGAAGCGA+TGG + Chr3:96602487-96602506 MsG0380017465.01.T01:CDS 50.0%
TGGCGCGTCAAGAACATTGT+TGG + Chr3:96598125-96598144 MsG0380017465.01.T01:intron 50.0%
TGGTCACTGAGCATGGTTCT+TGG - Chr3:96600892-96600911 None:intergenic 50.0%
! ACTTGGTTCGTGATTGGGTG+GGG - Chr3:96595075-96595094 None:intergenic 50.0%
! AGAAGGATTGGCATGTCCCA+TGG - Chr3:96602160-96602179 None:intergenic 50.0%
! ATCAATGGCGGTGCTGAGAA+TGG - Chr3:96594048-96594067 None:intergenic 50.0%
! CAGCGTATGCAAGCTCTAGT+GGG + Chr3:96598773-96598792 MsG0380017465.01.T01:CDS 50.0%
! CATTGGCTGCTGGATAGAAG+TGG - Chr3:96595369-96595388 None:intergenic 50.0%
! GTACTTGGTTCGTGATTGGG+TGG - Chr3:96595077-96595096 None:intergenic 50.0%
! TACTGGCCTGCAAATGCATC+AGG - Chr3:96595313-96595332 None:intergenic 50.0%
! TCAGCGTATGCAAGCTCTAG+TGG + Chr3:96598772-96598791 MsG0380017465.01.T01:CDS 50.0%
! TTTTAGCATTTACCCCCGCC+TGG - Chr3:96599741-96599760 None:intergenic 50.0%
!! CCCTTTTCTTGAAGGAGCAC+AGG - Chr3:96601670-96601689 None:intergenic 50.0%
!! CGAAGGGTTCTGAACTTGGT+GGG + Chr3:96598229-96598248 MsG0380017465.01.T01:CDS 50.0%
!! CTTGCGAAGGGTTCTGAACT+TGG + Chr3:96598225-96598244 MsG0380017465.01.T01:CDS 50.0%
!! GGGGTTGATGAACCATCATC+AGG - Chr3:96598887-96598906 None:intergenic 50.0%
!! TACGCTGATTCAACGTCTCC+AGG - Chr3:96598760-96598779 None:intergenic 50.0%
!! TTCGGCAGGGTATTTTCCTC+TGG - Chr3:96601187-96601206 None:intergenic 50.0%
!!! GCATTTTGGAATGTACGCCC+AGG + Chr3:96601366-96601385 MsG0380017465.01.T01:intron 50.0%
!!! TGTTTTTGGATGTGGTGGGG+TGG - Chr3:96595149-96595168 None:intergenic 50.0%
AACTGGATTCATCCAGGCGG+GGG + Chr3:96599726-96599745 MsG0380017465.01.T01:CDS 55.0%
AGGCAGAACCGGATTCAACC+AGG + Chr3:96599801-96599820 MsG0380017465.01.T01:CDS 55.0%
CAGTAGGATTCTCCACGGAC+TGG + Chr3:96598352-96598371 MsG0380017465.01.T01:intron 55.0%
CAGTCCGTGGAGAATCCTAC+TGG - Chr3:96598354-96598373 None:intergenic 55.0%
CATCATCAGGAGAGCAAGGC+AGG - Chr3:96598874-96598893 None:intergenic 55.0%
CATGTTGTGGCGTACGCATC+AGG + Chr3:96600441-96600460 MsG0380017465.01.T01:intron 55.0%
CGAGAGAGAGAGAGAGAGAG+AGG + Chr3:96594102-96594121 MsG0380017465.01.T01:intron 55.0%
CTCCTGCCTGATGCATTTGC+AGG + Chr3:96595304-96595323 MsG0380017465.01.T01:intron 55.0%
CTGCCTTGCTCTCCTGATGA+TGG + Chr3:96598872-96598891 MsG0380017465.01.T01:CDS 55.0%
GAACTGGATTCATCCAGGCG+GGG + Chr3:96599725-96599744 MsG0380017465.01.T01:CDS 55.0%
GGAATGTACGCCCAGGAGTT+CGG + Chr3:96601373-96601392 MsG0380017465.01.T01:intron 55.0%
GGGTCAGATAGTCTCCCTTC+TGG - Chr3:96598836-96598855 None:intergenic 55.0%
! CTTGGTTCGTGATTGGGTGG+GGG - Chr3:96595074-96595093 None:intergenic 55.0%
! GTGCCCTCAAGGGCATGTTA+AGG - Chr3:96595894-96595913 None:intergenic 55.0%
! TGGATGTGGTGGGGTGGAAT+CGG - Chr3:96595143-96595162 None:intergenic 55.0%
!! GCGAAGGGTTCTGAACTTGG+TGG + Chr3:96598228-96598247 MsG0380017465.01.T01:CDS 55.0%
CAGGAGTTCGGCTCCGAATG+CGG + Chr3:96601385-96601404 MsG0380017465.01.T01:intron 60.0%
GCATTCGGAGCCGAACTCCT+GGG - Chr3:96601386-96601405 None:intergenic 60.0%
GGCCTGCAAATGCATCAGGC+AGG - Chr3:96595309-96595328 None:intergenic 60.0%
! GGGATGATAACGCCAGTCCG+TGG - Chr3:96598367-96598386 None:intergenic 60.0%
CGCATTCGGAGCCGAACTCC+TGG - Chr3:96601387-96601406 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 96593980 96602912 96593980 ID=MsG0380017465.01;Name=MsG0380017465.01
Chr3 mRNA 96593980 96602912 96593980 ID=MsG0380017465.01.T01;Parent=MsG0380017465.01;Name=MsG0380017465.01.T01;_AED=0.39;_eAED=0.40;_QI=0|0.46|0.5|0.92|0.92|0.85|14|0|656
Chr3 exon 96593980 96594029 96593980 ID=MsG0380017465.01.T01:exon:2258;Parent=MsG0380017465.01.T01
Chr3 exon 96596268 96596316 96596268 ID=MsG0380017465.01.T01:exon:2259;Parent=MsG0380017465.01.T01
Chr3 exon 96598193 96598341 96598193 ID=MsG0380017465.01.T01:exon:2260;Parent=MsG0380017465.01.T01
Chr3 exon 96598530 96598602 96598530 ID=MsG0380017465.01.T01:exon:2261;Parent=MsG0380017465.01.T01
Chr3 exon 96598743 96598985 96598743 ID=MsG0380017465.01.T01:exon:2262;Parent=MsG0380017465.01.T01
Chr3 exon 96599664 96600105 96599664 ID=MsG0380017465.01.T01:exon:2263;Parent=MsG0380017465.01.T01
Chr3 exon 96600713 96600993 96600713 ID=MsG0380017465.01.T01:exon:2264;Parent=MsG0380017465.01.T01
Chr3 exon 96601612 96601798 96601612 ID=MsG0380017465.01.T01:exon:2265;Parent=MsG0380017465.01.T01
Chr3 exon 96602004 96602215 96602004 ID=MsG0380017465.01.T01:exon:2266;Parent=MsG0380017465.01.T01
Chr3 exon 96602408 96602547 96602408 ID=MsG0380017465.01.T01:exon:2267;Parent=MsG0380017465.01.T01
Chr3 exon 96602683 96602740 96602683 ID=MsG0380017465.01.T01:exon:2268;Parent=MsG0380017465.01.T01
Chr3 exon 96602826 96602912 96602826 ID=MsG0380017465.01.T01:exon:2269;Parent=MsG0380017465.01.T01
Chr3 CDS 96593980 96594029 96593980 ID=MsG0380017465.01.T01:cds;Parent=MsG0380017465.01.T01
Chr3 CDS 96596268 96596316 96596268 ID=MsG0380017465.01.T01:cds;Parent=MsG0380017465.01.T01
Chr3 CDS 96598193 96598341 96598193 ID=MsG0380017465.01.T01:cds;Parent=MsG0380017465.01.T01
Chr3 CDS 96598530 96598602 96598530 ID=MsG0380017465.01.T01:cds;Parent=MsG0380017465.01.T01
Chr3 CDS 96598743 96598985 96598743 ID=MsG0380017465.01.T01:cds;Parent=MsG0380017465.01.T01
Chr3 CDS 96599664 96600105 96599664 ID=MsG0380017465.01.T01:cds;Parent=MsG0380017465.01.T01
Chr3 CDS 96600713 96600993 96600713 ID=MsG0380017465.01.T01:cds;Parent=MsG0380017465.01.T01
Chr3 CDS 96601612 96601798 96601612 ID=MsG0380017465.01.T01:cds;Parent=MsG0380017465.01.T01
Chr3 CDS 96602004 96602215 96602004 ID=MsG0380017465.01.T01:cds;Parent=MsG0380017465.01.T01
Chr3 CDS 96602408 96602547 96602408 ID=MsG0380017465.01.T01:cds;Parent=MsG0380017465.01.T01
Chr3 CDS 96602683 96602740 96602683 ID=MsG0380017465.01.T01:cds;Parent=MsG0380017465.01.T01
Chr3 CDS 96602826 96602912 96602826 ID=MsG0380017465.01.T01:cds;Parent=MsG0380017465.01.T01
Gene Sequence

>MsG0380017465.01.T01

ATGGAGGAAGTGTTGGGTCCCACTGATGTTGTTGTTGTTGTGTTGAGACTAAATGTGAAAAAAGCAAAACTCTTAAGAAATGTGAAAAAAGCAAACGGGAATGTGAATTGTTCTGATAAGCTGAAAAGATGCTTGCGAAGGGTTCTGAACTTGGTGGGAATATTTGGAGAGAATTGCCAAGAAATTCTTCATCAGTTGTCTCAAACACTCCGCAAAAGAGATGTTTTGATAAATTATCCAGTCCACATTTTTGAAATCATTCAGAATGAGCAATTTGCCCCTATGCTGGAATTATTACTACTTACCACTGCTGCTTCAAAGGAGGAATATATGAACCTGGAGACGTTGAATCAGCGTATGCAAGCTCTAGTGGGTGTTTCTAAGTCTGATGCCGCTGGTTATTATGGCGTTCCAGAAGGGAGACTATCTGACCCTTTTATTGTTCATGACCTGCCTTGCTCTCCTGATGATGGTTCATCAACCCCCCTACTTGCTGATATGTGTGTGCTTCGTAACTTACCCGTTTATATGGTGGAAGCAATCTGGATGCCAACACCAGATCAAGCTACTCTCAGGAAGGAACTTAAAGATATTGATGACGATGAAGAGGACATACAAGGCAGCAGAACTGGATTCATCCAGGCGGGGGTAAATGCTAAAAAAGAACTTATTATTGTTCATGAGGGTGAAGAGGACATTCAAGGCAGAACCGGATTCAACCAGGATGGGATAAACGATAAAAAAGAAATCATCGAGTCAAAAGATGATCAAGAGAAGCAAACAAAATCCCCAAATACAATAATTGAGGCTGTTTCCTTGATTGATTTGTTCACACGTGATCAAATAGAAGAACATATTAGTAGTCTGAGAAAGGAATCTGTTCAGGTTAGTACACCACCTGCCAGTGTTTTCAATTACCTTGATCTGTTTACGTATGACTGTTATGATTTATGTCATGAACCAACTATTCCAAAAGGTAAAGCTATTTGGTTAAAGCTCATGAATGTGGTTGAATGCAATAAATGCAAAAGATGGCAGCATCAAATATGTGCACTCTACAACAACAAAAGAGATTTGGATTGCAGTGCTGAGTATATATGTCCTGTATGCCGCTTAAAAGAAATTAAAAACGGAATTCATGTTCCTTTACCAAAAGCTGCTAATTTTGGTGCCAAGGACTTGCCAAGAACCATGCTCAGTGACCACTTAGAAAAAAGACTTTTTGAGCGTCTTATGGAAGAGAGAGCAAACTGGGAAAAAGTTGAAGGGAACGAGAATCTTGATAAGATTGGATACCTTGATTTTTGTAAGAAACGGGGTTTCTCAACTTGCTACATATGGGCCTGTGCTCCTTCAAGAAAAGGGGATGATTATATACTATATTGTCATCCTGAAGAGCAAAAGACTCCGAAGAATGATAAGCTACGCCGTTGGTCAGTCTTTCTTTCTCCTTATGTGTCTCTGTGTGAATTTTGGAACTCCAAGGTGACAACTTCTCGTTTGCCATACTTTGATGGAGACTACTGGTGTGGTTATGTTATGGAAGCAGCCAGGACCATTGAAAAAGAGAGCGGAGGAGACTATGAAAAGATGTTGAAGAAACAAGTGCCAAATAGAGCTTTAAAGACCATGGGACATGCCAATCCTTCTAAAGACACTGCCAAAGACATTCTGGTGATGCAAAAAGTTGGCCAAAAGATATTGCCTACCAGGGAAAACTTCATCATAGCTCACTTGCAGTATTCATGCATGCACTGCCATGAAGTGATAGCATCTGGGAAGCGATGGTTTTGCACTGAATGCAAGAAATTTCAGGAGTGTGAAAGATGCCATAGTTCTGATGCACACATTTCAAAGAATGGCGAGGTGCATACACTATGTCAGGCTGTTGTTGATGATATTCCCTCCACACCTAAGCATAATGATATCATCCTTGAGAGTGGATATTTGAAAATAGGAACAGCCTTTTGA
Protein sequence

>MsG0380017465.01.T01

MEEVLGPTDVVVVVLRLNVKKAKLLRNVKKANGNVNCSDKLKRCLRRVLNLVGIFGENCQEILHQLSQTLRKRDVLINYPVHIFEIIQNEQFAPMLELLLLTTAASKEEYMNLETLNQRMQALVGVSKSDAAGYYGVPEGRLSDPFIVHDLPCSPDDGSSTPLLADMCVLRNLPVYMVEAIWMPTPDQATLRKELKDIDDDEEDIQGSRTGFIQAGVNAKKELIIVHEGEEDIQGRTGFNQDGINDKKEIIESKDDQEKQTKSPNTIIEAVSLIDLFTRDQIEEHISSLRKESVQVSTPPASVFNYLDLFTYDCYDLCHEPTIPKGKAIWLKLMNVVECNKCKRWQHQICALYNNKRDLDCSAEYICPVCRLKEIKNGIHVPLPKAANFGAKDLPRTMLSDHLEKRLFERLMEERANWEKVEGNENLDKIGYLDFCKKRGFSTCYIWACAPSRKGDDYILYCHPEEQKTPKNDKLRRWSVFLSPYVSLCEFWNSKVTTSRLPYFDGDYWCGYVMEAARTIEKESGGDYEKMLKKQVPNRALKTMGHANPSKDTAKDILVMQKVGQKILPTRENFIIAHLQYSCMHCHEVIASGKRWFCTECKKFQECERCHSSDAHISKNGEVHTLCQAVVDDIPSTPKHNDIILESGYLKIGTAF*