AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041387.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041387.01.T01 MTR_7g109870 78.440 436 6 3 1 394 1 390 0.0 657
MsG0780041387.01.T01 MTR_7g109870 77.727 440 6 4 1 394 1 394 0.0 652
MsG0780041387.01.T01 MTR_1g086590 54.545 440 92 6 1 394 1 378 1.70e-146 423
MsG0780041387.01.T01 MTR_1g086590 54.566 438 91 6 1 392 1 376 2.15e-144 419
MsG0780041387.01.T01 MTR_1g086590 54.566 438 91 6 1 392 1 376 2.57e-144 420
MsG0780041387.01.T01 MTR_1g086590 50.390 385 83 6 1 339 1 323 7.57e-110 327
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041387.01.T01 AT2G47210 55.102 441 100 9 2 394 5 395 6.74e-148 429
MsG0780041387.01.T01 AT2G47210 55.102 441 100 9 2 394 5 395 6.74e-148 429
MsG0780041387.01.T01 AT2G47210 55.102 441 100 9 2 394 5 395 6.74e-148 429

Find 115 sgRNAs with CRISPR-Local

Find 551 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATCCTTCGCGTCCATTT+AGG 0.193541 7:+90351594 None:intergenic
GAGAAATTGAGAGGGAAAAT+TGG 0.199779 7:-90351685 MsG0780041387.01.T01:five_prime_UTR
ATTCCCGATTCGTTGAATTT+TGG 0.213340 7:-90346893 MsG0780041387.01.T01:CDS
TTTCATTGATATCAGTCTTA+TGG 0.239001 7:-90344790 MsG0780041387.01.T01:CDS
TATACCGATATACCTGTTTC+TGG 0.239056 7:+90347315 None:intergenic
CTTGCCAGGGCTGCATCTTC+CGG 0.253582 7:-90349167 MsG0780041387.01.T01:CDS
TTTCTCTTGTTGTCTTGTTT+GGG 0.260220 7:+90348909 None:intergenic
ATTTCTTGTGAAACATTATA+TGG 0.283878 7:+90348964 None:intergenic
TCAATTCAATTCAATTCAAT+TGG 0.292621 7:+90351643 None:intergenic
TTTGACTTCACCTTAATGAT+AGG 0.315672 7:+90349128 None:intergenic
TTGCCAGGGCTGCATCTTCC+GGG 0.316334 7:-90349166 MsG0780041387.01.T01:CDS
ATATCCTTCGCGTCCATTTA+GGG 0.321840 7:+90351595 None:intergenic
TGTTCCTATGAAACCCTAAA+TGG 0.331803 7:-90351608 MsG0780041387.01.T01:exon
CAATTCAATTCAATTCAATT+GGG 0.345159 7:+90351644 None:intergenic
TGCAACACATCCTATCATTA+AGG 0.347399 7:-90349138 MsG0780041387.01.T01:intron
ATGGACGCGAAGGATATTCT+TGG 0.347443 7:-90351589 MsG0780041387.01.T01:CDS
CAGTCTTATGGATAGTTATA+TGG 0.354155 7:-90344778 MsG0780041387.01.T01:CDS
AATTTGTATAATTCCTTTCA+AGG 0.357978 7:-90344813 MsG0780041387.01.T01:CDS
TCTCTGTCATGCAGCGTTGC+GGG 0.359658 7:-90349198 MsG0780041387.01.T01:intron
ATCATCTTTACGAGCAGAAT+TGG 0.368961 7:+90351102 None:intergenic
GCGTCCATTTAGGGTTTCAT+AGG 0.370836 7:+90351604 None:intergenic
CACAAGAAATGGAGCGAAAA+CGG 0.373448 7:-90348951 MsG0780041387.01.T01:CDS
ATATAATGTTTCACAAGAAA+TGG 0.380297 7:-90348962 MsG0780041387.01.T01:CDS
TTTAGCTACCTTGTTGTACT+TGG 0.384441 7:+90350931 None:intergenic
ATCAGGACTCAAAATTGAAT+TGG 0.387303 7:-90344567 MsG0780041387.01.T01:three_prime_UTR
CGAGTTACGGATGGCTTCTA+AGG 0.391035 7:-90348749 MsG0780041387.01.T01:intron
AATTGAGAAGCATCAATTGA+TGG 0.396902 7:+90351334 None:intergenic
TGCGGGCTATATTACTTGCC+AGG 0.397695 7:-90349181 MsG0780041387.01.T01:CDS
ACCTCCAAAATTCAACGAAT+CGG 0.405812 7:+90346889 None:intergenic
CTTGTTGTCTTGTTTGGGAG+AGG 0.408483 7:+90348914 None:intergenic
TTTCCGACCTTTGGTGTGCC+TGG 0.419064 7:+90347023 None:intergenic
TTCAGCTTCGTGTATATTTG+AGG 0.419331 7:-90347747 MsG0780041387.01.T01:intron
CAAAACCTCCAAGAGTTTGA+TGG 0.421038 7:+90344618 None:intergenic
AGCAAACATTGCAAGATCTC+GGG 0.423802 7:-90347654 MsG0780041387.01.T01:CDS
ATGATCTTCATCTTTACCAT+TGG 0.430773 7:-90351084 MsG0780041387.01.T01:CDS
TGATCTTCATCTTTACCATT+GGG 0.431644 7:-90351083 MsG0780041387.01.T01:intron
ACAAGAAATGGAGCGAAAAC+GGG 0.436669 7:-90348950 MsG0780041387.01.T01:CDS
GGTTACTGAACAGTCTCAAT+TGG 0.436817 7:-90348327 MsG0780041387.01.T01:CDS
TTGGCTGAATCTCCAGAAAC+AGG 0.448014 7:-90347327 MsG0780041387.01.T01:intron
GTCAATGGTGTTCTACCTAC+TGG 0.449074 7:-90350968 MsG0780041387.01.T01:CDS
CCTCCAAAATTCAACGAATC+GGG 0.465713 7:+90346890 None:intergenic
GCAGAAGGTACAACCATTTG+TGG 0.474452 7:+90348224 None:intergenic
GACATATGCACTCGAGCAAA+TGG 0.476593 7:-90347725 MsG0780041387.01.T01:CDS
GATAGCAGCCATCAAACTCT+TGG 0.477289 7:-90344626 MsG0780041387.01.T01:three_prime_UTR
GAATGTGCAACTTCCACAAA+TGG 0.479963 7:-90348237 MsG0780041387.01.T01:CDS
CAAACTCAACCGCTGGAGTT+CGG 0.480171 7:-90347693 MsG0780041387.01.T01:CDS
GAGCAAACATTGCAAGATCT+CGG 0.481522 7:-90347655 MsG0780041387.01.T01:CDS
GCATCAATTGATGGCATAAG+AGG 0.485257 7:+90351343 None:intergenic
TTTCAGGTTCGAGTAGTCAA+TGG 0.491064 7:-90350983 MsG0780041387.01.T01:intron
AAAAGTTAAAAGCTTTCGCC+AGG 0.500072 7:+90344692 None:intergenic
GTCCCCGGAAGATGCAGCCC+TGG 0.501841 7:+90349163 None:intergenic
TTGAATTGAATTGAATTGAA+AGG 0.502198 7:-90351639 MsG0780041387.01.T01:five_prime_UTR
CTGGAGTTCGGACTATCAAA+CGG 0.502900 7:-90347681 MsG0780041387.01.T01:CDS
ATCACGGAACGATGAACCTT+CGG 0.506414 7:+90347064 None:intergenic
GTCTCTGTCATGCAGCGTTG+CGG 0.506971 7:-90349199 MsG0780041387.01.T01:intron
ACAAGAGAAAAGAGATGAAG+AGG 0.510309 7:-90348896 MsG0780041387.01.T01:intron
ACCTCGCGTGAAATGCCATC+AGG 0.515608 7:+90351493 None:intergenic
CAAGCTTCAAACTCAACCGC+TGG 0.519312 7:-90347700 MsG0780041387.01.T01:CDS
ATAGTATAACGTCGAAGCAT+CGG 0.523598 7:-90351724 MsG0780041387.01.T01:five_prime_UTR
GCGAAAACGGGCACTTTCCA+TGG 0.524771 7:-90348938 MsG0780041387.01.T01:CDS
TGGAGTTCGGACTATCAAAC+GGG 0.529952 7:-90347680 MsG0780041387.01.T01:CDS
AAAGCCTCCTACTCACGAAA+AGG 0.530448 7:-90351305 MsG0780041387.01.T01:intron
AATTCAATTCAATTCAATTG+GGG 0.531181 7:+90351645 None:intergenic
GAGAGGGAAAATTGGAGCGG+AGG 0.541807 7:-90351677 MsG0780041387.01.T01:five_prime_UTR
CGAACAGTTGAGAAATTGAG+AGG 0.542121 7:-90351694 MsG0780041387.01.T01:five_prime_UTR
GATATCAATGAAACCTTGAA+AGG 0.544542 7:+90344800 None:intergenic
TACTCTAGCTTCTCTCCGCA+TGG 0.547011 7:-90348189 MsG0780041387.01.T01:intron
CTTATGGATAGTTATATGGA+AGG 0.554718 7:-90344774 MsG0780041387.01.T01:CDS
CTTAGAAGCCATCCGTAACT+CGG 0.558886 7:+90348750 None:intergenic
TGTGGAAGTTGCACATTCGA+AGG 0.559456 7:+90348242 None:intergenic
TAAGAAGAGAAATACTAACT+TGG 0.560571 7:-90347346 MsG0780041387.01.T01:CDS
TTTCTCTGAGATTCTTTGGG+AGG 0.563303 7:+90351517 None:intergenic
CCAGGTCAATTTGAAACCGA+GGG 0.563342 7:-90347405 MsG0780041387.01.T01:intron
TAGGTTTATGCACTTACTGG+TGG 0.564499 7:-90351373 MsG0780041387.01.T01:CDS
GAAGGTTCATCGTTCCGTGA+TGG 0.565283 7:-90347062 MsG0780041387.01.T01:CDS
AGCAGCCATCAAACTCTTGG+AGG 0.567278 7:-90344623 MsG0780041387.01.T01:three_prime_UTR
GTTACAGAGAGGGCTGTCCC+TGG 0.571428 7:-90348278 MsG0780041387.01.T01:CDS
TGCCAGGGCTGCATCTTCCG+GGG 0.572929 7:-90349165 MsG0780041387.01.T01:CDS
TCCAGGTCAATTTGAAACCG+AGG 0.576584 7:-90347406 MsG0780041387.01.T01:intron
GAAGGAGATATAGTTTCACC+AGG 0.581103 7:+90348260 None:intergenic
TTACGAGCAGAATTGGTGAA+AGG 0.585208 7:+90351109 None:intergenic
GATGAGAATTATGAATGTTG+TGG 0.587741 7:-90344648 MsG0780041387.01.T01:three_prime_UTR
ACCTGATGGCATTTCACGCG+AGG 0.587818 7:-90351494 MsG0780041387.01.T01:intron
GCGGGCTATATTACTTGCCA+GGG 0.590495 7:-90349180 MsG0780041387.01.T01:CDS
TCTTGTTTGGGAGAGGACCA+TGG 0.591121 7:+90348921 None:intergenic
AAAGTATTTGACAGATCCTG+TGG 0.594763 7:-90350786 MsG0780041387.01.T01:CDS
GTAGAGGCATTATCTGCAGA+AGG 0.598351 7:+90348209 None:intergenic
TGTGCCTGGTGTTTCACCGT+AGG 0.598536 7:+90347037 None:intergenic
GGATCCTACGGTGAAACACC+AGG 0.600080 7:-90347041 MsG0780041387.01.T01:CDS
GTGGCAGGTGCAATATAAAG+AGG 0.600841 7:-90347087 MsG0780041387.01.T01:intron
TCGTTCCGTGATGGATCCTA+CGG 0.603828 7:-90347053 MsG0780041387.01.T01:CDS
GAAACCCTAAATGGACGCGA+AGG 0.605606 7:-90351599 MsG0780041387.01.T01:exon
TTTGATAGTCCGAACTCCAG+CGG 0.617390 7:+90347684 None:intergenic
AAGAATAGCCGAGTTACGGA+TGG 0.620429 7:-90348758 MsG0780041387.01.T01:CDS
GAACAGTTGAGAAATTGAGA+GGG 0.620892 7:-90351693 MsG0780041387.01.T01:five_prime_UTR
GCAAAAGAATAGTCTCCAGT+AGG 0.625902 7:+90350953 None:intergenic
ACGAATCGGGAATAAATGTA+CGG 0.628215 7:+90346903 None:intergenic
TCAATTGATGGCATAAGAGG+TGG 0.628674 7:+90351346 None:intergenic
CTGTCAGGTGCAATGTGGAA+AGG 0.631174 7:-90344842 MsG0780041387.01.T01:intron
GCGGAGAGAAGCTAGAGTAG+AGG 0.632330 7:+90348193 None:intergenic
ATTGAGAGGGAAAATTGGAG+CGG 0.634070 7:-90351680 MsG0780041387.01.T01:five_prime_UTR
CATGCAAACGAAAATGTGCA+CGG 0.645491 7:+90348567 None:intergenic
GAATCTCAGAGAAAACCTGA+TGG 0.650054 7:-90351508 MsG0780041387.01.T01:CDS
GCAAACATTGCAAGATCTCG+GGG 0.655130 7:-90347653 MsG0780041387.01.T01:intron
AGGATGTGTTGCAATGTCCC+CGG 0.656289 7:+90349148 None:intergenic
TGAAACACCAGGCACACCAA+AGG 0.660161 7:-90347030 MsG0780041387.01.T01:intron
TGATGCAGAAGTTACAGAGA+GGG 0.665773 7:-90348288 MsG0780041387.01.T01:CDS
GTGCAATATAAAGAGGCCGA+AGG 0.666909 7:-90347080 MsG0780041387.01.T01:CDS
GTATAACGTCGAAGCATCGG+AGG 0.667484 7:-90351721 MsG0780041387.01.T01:five_prime_UTR
AAGTATTTGACAGATCCTGT+GGG 0.677023 7:-90350785 MsG0780041387.01.T01:intron
CATCATCAAATACACAGACG+AGG 0.685360 7:-90350816 MsG0780041387.01.T01:CDS
GTTATCTGTCAGGTGCAATG+TGG 0.709467 7:-90344847 MsG0780041387.01.T01:intron
TTTCACCGTAGGATCCATCA+CGG 0.718802 7:+90347048 None:intergenic
CTGATGCAGAAGTTACAGAG+AGG 0.722734 7:-90348289 MsG0780041387.01.T01:CDS
AAGGAGATATAGTTTCACCA+GGG 0.724675 7:+90348261 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAAATTAAAAAAACA+AGG - Chr7:90350263-90350282 MsG0780041387.01.T01:intron 10.0%
!! TAATTAAATCAAAGAAATTT+GGG + Chr7:90349178-90349197 None:intergenic 10.0%
!!! AATTGAATTGTATTATTTTT+AGG - Chr7:90344908-90344927 MsG0780041387.01.T01:intron 10.0%
!!! TATTATTTTTTTTTCTTTGA+AGG + Chr7:90347436-90347455 None:intergenic 10.0%
!!! TTCATATTTTTATTTCTTTT+TGG - Chr7:90349300-90349319 MsG0780041387.01.T01:intron 10.0%
!! AATTAAATCAAAGAAATTTG+GGG + Chr7:90349177-90349196 None:intergenic 15.0%
!! ACATAAAATAAATTTCAGTT+CGG + Chr7:90345623-90345642 None:intergenic 15.0%
!! ACTATTAAATAAATATATGC+TGG + Chr7:90346117-90346136 None:intergenic 15.0%
!! GTAAAATTAAATGAGAAATT+TGG + Chr7:90346059-90346078 None:intergenic 15.0%
!! GTAATAGTACATTATTAAAA+TGG + Chr7:90349641-90349660 None:intergenic 15.0%
!! GTAATTAAATCAAAGAAATT+TGG + Chr7:90349179-90349198 None:intergenic 15.0%
!! TATATGATATATTGTACAAT+GGG + Chr7:90346672-90346691 None:intergenic 15.0%
!! TATGTTTAATGATAAATAGA+CGG + Chr7:90349495-90349514 None:intergenic 15.0%
!! TCATATTTAATTAGGTTAAA+TGG - Chr7:90349800-90349819 MsG0780041387.01.T01:intron 15.0%
!! TCTAAATTTCTATAAAGTAA+GGG - Chr7:90349464-90349483 MsG0780041387.01.T01:intron 15.0%
!! TTCTAAATTTCTATAAAGTA+AGG - Chr7:90349463-90349482 MsG0780041387.01.T01:intron 15.0%
!!! AAAACTTAAAATTTGTTCAT+TGG - Chr7:90345732-90345751 MsG0780041387.01.T01:intron 15.0%
!!! AAATAATTTTTTTTAACGAG+GGG - Chr7:90348470-90348489 MsG0780041387.01.T01:intron 15.0%
!!! AATTTGATATTTCGTTATTT+TGG + Chr7:90348201-90348220 None:intergenic 15.0%
!!! ACTTATATTTTTTATTTTGC+AGG - Chr7:90347503-90347522 MsG0780041387.01.T01:intron 15.0%
!!! ATTAGTTTTACATTTACTTT+TGG - Chr7:90349614-90349633 MsG0780041387.01.T01:intron 15.0%
!!! ATTGATTTTATACATTTTTC+AGG - Chr7:90347952-90347971 MsG0780041387.01.T01:intron 15.0%
!!! ATTTGATATTTCGTTATTTT+GGG + Chr7:90348200-90348219 None:intergenic 15.0%
!!! CAAATAATTTTTTTTAACGA+GGG - Chr7:90348469-90348488 MsG0780041387.01.T01:intron 15.0%
!!! TCAAATAATTTTTTTTAACG+AGG - Chr7:90348468-90348487 MsG0780041387.01.T01:intron 15.0%
!!! TGTTTTATAATTACCAATTT+GGG - Chr7:90347860-90347879 MsG0780041387.01.T01:intron 15.0%
!!! TTTAATTTTGTTTTTGAACA+GGG + Chr7:90350257-90350276 None:intergenic 15.0%
!!! TTTTAATAATGTACTATTAC+TGG - Chr7:90349641-90349660 MsG0780041387.01.T01:intron 15.0%
!!! TTTTAATTTTGTTTTTGAAC+AGG + Chr7:90350258-90350277 None:intergenic 15.0%
!! AAAGAATGAATAAAGTGAAT+CGG + Chr7:90344867-90344886 None:intergenic 20.0%
!! AAGATTTGATCAATACATAA+GGG + Chr7:90350391-90350410 None:intergenic 20.0%
!! AATTCAATTCAATTCAATTG+GGG + Chr7:90344658-90344677 None:intergenic 20.0%
!! AATTTGTATAATTCCTTTCA+AGG - Chr7:90351487-90351506 MsG0780041387.01.T01:intron 20.0%
!! ACATAATTATAAATTCATCC+AGG + Chr7:90351081-90351100 None:intergenic 20.0%
!! AGTTTAGACATAAAAAATGA+GGG - Chr7:90346578-90346597 MsG0780041387.01.T01:intron 20.0%
!! ATAAGAATCTTCAAATGATA+AGG + Chr7:90349890-90349909 None:intergenic 20.0%
!! ATATAATGTTTCACAAGAAA+TGG - Chr7:90347338-90347357 MsG0780041387.01.T01:CDS 20.0%
!! ATATGATATATTGTACAATG+GGG + Chr7:90346671-90346690 None:intergenic 20.0%
!! ATGTAAAACTAATCAATTGA+CGG + Chr7:90349607-90349626 None:intergenic 20.0%
!! ATTAAATCAAAGAAATTTGG+GGG + Chr7:90349176-90349195 None:intergenic 20.0%
!! ATTAAGAAAGATGGTTAATT+TGG + Chr7:90348756-90348775 None:intergenic 20.0%
!! ATTTCTTGTGAAACATTATA+TGG + Chr7:90347339-90347358 None:intergenic 20.0%
!! CAATTCAATTCAATTCAATT+GGG + Chr7:90344659-90344678 None:intergenic 20.0%
!! CTTATATTTGTACAATAAGA+TGG - Chr7:90351228-90351247 MsG0780041387.01.T01:intron 20.0%
!! CTTTACTCAATAATTTATCA+CGG - Chr7:90345882-90345901 MsG0780041387.01.T01:intron 20.0%
!! GCAATCAATTTATATATCAA+TGG - Chr7:90346608-90346627 MsG0780041387.01.T01:intron 20.0%
!! GGAAAATAAAAATAAGTGTT+TGG + Chr7:90350021-90350040 None:intergenic 20.0%
!! GGAATCTATAAAAAATACAA+GGG + Chr7:90349865-90349884 None:intergenic 20.0%
!! GTATATGATATATTGTACAA+TGG + Chr7:90346673-90346692 None:intergenic 20.0%
!! GTTAAGCATCATATTTAATT+AGG - Chr7:90349792-90349811 MsG0780041387.01.T01:intron 20.0%
!! TAATTAGACAAAATACGTTA+TGG + Chr7:90349579-90349598 None:intergenic 20.0%
!! TATTAAGATGATTATCCAAA+CGG - Chr7:90345132-90345151 MsG0780041387.01.T01:intron 20.0%
!! TCAATTCAATTCAATTCAAT+TGG + Chr7:90344660-90344679 None:intergenic 20.0%
!! TGGAATCTATAAAAAATACA+AGG + Chr7:90349866-90349885 None:intergenic 20.0%
!! TTAACAAATGCAATTAAAAC+AGG + Chr7:90346702-90346721 None:intergenic 20.0%
!! TTGAATTGAATTGAATTGAA+AGG - Chr7:90344661-90344680 MsG0780041387.01.T01:three_prime_UTR 20.0%
!! TTTATAGAAATTTAGAAAGC+AGG + Chr7:90349460-90349479 None:intergenic 20.0%
!!! ATATGAGTTTTTGCATTTTT+TGG + Chr7:90350093-90350112 None:intergenic 20.0%
!!! ATTACTTGTTATGATATATG+TGG - Chr7:90349194-90349213 MsG0780041387.01.T01:intron 20.0%
!!! CAAATTGGTAATTATAAAAC+AGG + Chr7:90347861-90347880 None:intergenic 20.0%
!!! CGGTTTTTTTTTTTAGTTTA+TGG + Chr7:90350167-90350186 None:intergenic 20.0%
!!! CTGTTTTATAATTACCAATT+TGG - Chr7:90347859-90347878 MsG0780041387.01.T01:intron 20.0%
!!! GATTAATATACAATTTTGTG+TGG - Chr7:90345939-90345958 MsG0780041387.01.T01:intron 20.0%
!!! GTTTTATAATTACCAATTTG+GGG - Chr7:90347861-90347880 MsG0780041387.01.T01:intron 20.0%
!!! TAACTTAAAACTTCATTTTG+TGG - Chr7:90348385-90348404 MsG0780041387.01.T01:intron 20.0%
!!! TACAGTTTTTTGGAAATTTA+TGG - Chr7:90345554-90345573 MsG0780041387.01.T01:intron 20.0%
!!! TATGAGTTTTTGCATTTTTT+GGG + Chr7:90350092-90350111 None:intergenic 20.0%
!!! TATGTATTTTAATACCCTAT+AGG + Chr7:90346148-90346167 None:intergenic 20.0%
!!! TTAATTTTGTTTTTGAACAG+GGG + Chr7:90350256-90350275 None:intergenic 20.0%
!!! TTTGATTTTAAAGAGTATCA+AGG + Chr7:90350325-90350344 None:intergenic 20.0%
!!! TTTGGATGAAAATTTAAGTT+GGG - Chr7:90351035-90351054 MsG0780041387.01.T01:intron 20.0%
!!! TTTTTATTATCAAGAGAAGA+TGG + Chr7:90344756-90344775 None:intergenic 20.0%
!!! TTTTTGGATTTGAAAATTCT+GGG - Chr7:90350942-90350961 MsG0780041387.01.T01:CDS 20.0%
!!! TTTTTTAAAGCTTCCAAATT+GGG - Chr7:90346354-90346373 MsG0780041387.01.T01:intron 20.0%
!!! TTTTTTTAAAGCTTCCAAAT+TGG - Chr7:90346353-90346372 MsG0780041387.01.T01:intron 20.0%
! AAAGATGTACATGTAATTAG+AGG + Chr7:90346267-90346286 None:intergenic 25.0%
! AACTTTCAATTCTGATGATA+TGG - Chr7:90347033-90347052 MsG0780041387.01.T01:CDS 25.0%
! AAGCTTATAACTAATACAAC+TGG - Chr7:90345770-90345789 MsG0780041387.01.T01:intron 25.0%
! AATAATGTACTATTACTGGT+TGG - Chr7:90349645-90349664 MsG0780041387.01.T01:intron 25.0%
! AATGTGTAAAATTGATGAGT+TGG + Chr7:90351193-90351212 None:intergenic 25.0%
! AATTTATATATCAATGGACC+TGG - Chr7:90346614-90346633 MsG0780041387.01.T01:intron 25.0%
! ACTCATCACTTTGAATATTA+GGG - Chr7:90347694-90347713 MsG0780041387.01.T01:CDS 25.0%
! AGAATACGTATGATAAGATT+CGG + Chr7:90350187-90350206 None:intergenic 25.0%
! ATAATAGTTCTTCCTTACTT+TGG - Chr7:90346518-90346537 MsG0780041387.01.T01:intron 25.0%
! ATATTAATGCATTGAACACT+TGG + Chr7:90346798-90346817 None:intergenic 25.0%
! ATATTGGATTATTCTTGTGT+TGG - Chr7:90345816-90345835 MsG0780041387.01.T01:intron 25.0%
! ATGTATAAAATCAATATCCC+AGG + Chr7:90347947-90347966 None:intergenic 25.0%
! ATTAAGATGATTATCCAAAC+GGG - Chr7:90345133-90345152 MsG0780041387.01.T01:intron 25.0%
! CAAAAAATCTTGATGTTACA+AGG - Chr7:90351267-90351286 MsG0780041387.01.T01:intron 25.0%
! CAGTTTAGACATAAAAAATG+AGG - Chr7:90346577-90346596 MsG0780041387.01.T01:intron 25.0%
! CCAAAAATATAGCAATGAAT+AGG + Chr7:90345422-90345441 None:intergenic 25.0%
! CTATAAAGTTAAAGCATGTA+GGG + Chr7:90351373-90351392 None:intergenic 25.0%
! CTTATGAAAATAAGCTGAAA+AGG + Chr7:90345092-90345111 None:intergenic 25.0%
! CTTTCTTTCAAAAACATTGT+TGG - Chr7:90348712-90348731 MsG0780041387.01.T01:intron 25.0%
! GAAGATTTGATCAATACATA+AGG + Chr7:90350392-90350411 None:intergenic 25.0%
! GAGTTAAATGATATGAATTG+TGG + Chr7:90347012-90347031 None:intergenic 25.0%
! GTTTGGATGAAAATTTAAGT+TGG - Chr7:90351034-90351053 MsG0780041387.01.T01:intron 25.0%
! TAAAAGACCTAGAAAACAAA+AGG - Chr7:90349720-90349739 MsG0780041387.01.T01:intron 25.0%
! TAAACAATCATACATTAGAC+AGG + Chr7:90349113-90349132 None:intergenic 25.0%
! TAAGAAGAGAAATACTAACT+TGG - Chr7:90348954-90348973 MsG0780041387.01.T01:CDS 25.0%
! TAATATTCAAAGTGATGAGT+AGG + Chr7:90347694-90347713 None:intergenic 25.0%
! TACAATTTCAGAACACAAAA+TGG + Chr7:90348157-90348176 None:intergenic 25.0%
! TACTCATCACTTTGAATATT+AGG - Chr7:90347693-90347712 MsG0780041387.01.T01:CDS 25.0%
! TCTAATTACATGTACATCTT+TGG - Chr7:90346266-90346285 MsG0780041387.01.T01:intron 25.0%
! TGAGTAAAGAAAAAACTTCA+AGG + Chr7:90345871-90345890 None:intergenic 25.0%
! TGTAAAACTAATCAATTGAC+GGG + Chr7:90349606-90349625 None:intergenic 25.0%
! TTAAAAAAAATCCTGTCCTT+TGG - Chr7:90346461-90346480 MsG0780041387.01.T01:intron 25.0%
! TTAAAGGATCGATATTATAG+TGG - Chr7:90346951-90346970 MsG0780041387.01.T01:CDS 25.0%
! TTAAATCAAAGAAATTTGGG+GGG + Chr7:90349175-90349194 None:intergenic 25.0%
! TTCAATAAAAGAATTCCAGA+CGG - Chr7:90351136-90351155 MsG0780041387.01.T01:intron 25.0%
! TTTCATTGATATCAGTCTTA+TGG - Chr7:90351510-90351529 MsG0780041387.01.T01:CDS 25.0%
!! AATAGTCAGATTTTCCTATA+GGG - Chr7:90346131-90346150 MsG0780041387.01.T01:intron 25.0%
!! CCTATTCATTGCTATATTTT+TGG - Chr7:90345419-90345438 MsG0780041387.01.T01:intron 25.0%
!! GAATTGAATTGAAAGGTTTT+TGG - Chr7:90344668-90344687 MsG0780041387.01.T01:three_prime_UTR 25.0%
!! GGATTTTCGAATGAATTTTT+GGG + Chr7:90350146-90350165 None:intergenic 25.0%
!! GTGTTTGGTAATTTAAATAC+AGG + Chr7:90350006-90350025 None:intergenic 25.0%
!! TAATAGTCAGATTTTCCTAT+AGG - Chr7:90346130-90346149 MsG0780041387.01.T01:intron 25.0%
!! TCGTTACAAACATTTCATTT+TGG + Chr7:90348830-90348849 None:intergenic 25.0%
!! TGGATTTTCGAATGAATTTT+TGG + Chr7:90350147-90350166 None:intergenic 25.0%
!! TTGAATTTAAAGCTTGTCAA+TGG - Chr7:90351403-90351422 MsG0780041387.01.T01:intron 25.0%
!! TTTGGTAATTTAAATACAGG+TGG + Chr7:90350003-90350022 None:intergenic 25.0%
!!! AATTATTTGATTTGTGTGAG+AGG - Chr7:90346868-90346887 MsG0780041387.01.T01:intron 25.0%
!!! AATTTTGAAGATCAGAATTC+TGG + Chr7:90348423-90348442 None:intergenic 25.0%
!!! ACTCTGTTGATTTTTTTAAG+AGG - Chr7:90350511-90350530 MsG0780041387.01.T01:intron 25.0%
!!! ATCTATAAAACTGTTGTTTC+AGG - Chr7:90349514-90349533 MsG0780041387.01.T01:intron 25.0%
!!! ATTATGTTTTTCAGGTTACT+TGG - Chr7:90345159-90345178 MsG0780041387.01.T01:intron 25.0%
!!! CTTGTAACATCAAGATTTTT+TGG + Chr7:90351269-90351288 None:intergenic 25.0%
!!! GTTTGATGAGTTTTTTAAAG+AGG - Chr7:90350649-90350668 MsG0780041387.01.T01:intron 25.0%
!!! GTTTTTGGATTTGAAAATTC+TGG - Chr7:90350941-90350960 MsG0780041387.01.T01:CDS 25.0%
!!! TCACTTGTTAGAATTTTCAT+GGG - Chr7:90349076-90349095 MsG0780041387.01.T01:intron 25.0%
!!! TGTCTAATTGTACAGTTTTT+TGG - Chr7:90345544-90345563 MsG0780041387.01.T01:intron 25.0%
!!! TGTTGATTTTTTTAAGAGGA+TGG - Chr7:90350515-90350534 MsG0780041387.01.T01:intron 25.0%
!!! TTAGCCTATGTTTTAAAATC+AGG - Chr7:90351716-90351735 MsG0780041387.01.T01:five_prime_UTR 25.0%
!!! TTCACTTGTTAGAATTTTCA+TGG - Chr7:90349075-90349094 MsG0780041387.01.T01:intron 25.0%
!!! TTGAATATCATTTTCTGAAG+AGG - Chr7:90350539-90350558 MsG0780041387.01.T01:intron 25.0%
!!! TTTAAAGAGTATCAAGGTAT+GGG + Chr7:90350319-90350338 None:intergenic 25.0%
!!! TTTTAAAGAGTATCAAGGTA+TGG + Chr7:90350320-90350339 None:intergenic 25.0%
AAAAACATAATAACCCCGTT+TGG + Chr7:90345150-90345169 None:intergenic 30.0%
AAAGGGAAGAGTGAAAAATA+AGG - Chr7:90350739-90350758 MsG0780041387.01.T01:intron 30.0%
AAATATGAATTTCCGACCTT+TGG + Chr7:90349289-90349308 None:intergenic 30.0%
AAATCTTGATGTTACAAGGT+TGG - Chr7:90351271-90351290 MsG0780041387.01.T01:intron 30.0%
AACAGCAAATGTATACTAAG+AGG + Chr7:90347242-90347261 None:intergenic 30.0%
AAGGGAAGAGTGAAAAATAA+GGG - Chr7:90350740-90350759 MsG0780041387.01.T01:intron 30.0%
AATAAGCTGAAAAGGACTTA+TGG + Chr7:90345084-90345103 None:intergenic 30.0%
AATAATCCAATATCCTTCAG+CGG + Chr7:90345809-90345828 None:intergenic 30.0%
ACATTATGAAAATTGTGCCT+AGG + Chr7:90348312-90348331 None:intergenic 30.0%
ACCTTGTATTTACCATAGTT+TGG - Chr7:90346223-90346242 MsG0780041387.01.T01:intron 30.0%
AGGAAATTAAAGAGAGAACA+AGG - Chr7:90350669-90350688 MsG0780041387.01.T01:intron 30.0%
AGTATACGTCATTTACTATG+AGG + Chr7:90347486-90347505 None:intergenic 30.0%
ATACTCTCCTATCTAATACA+TGG + Chr7:90348781-90348800 None:intergenic 30.0%
ATCAGGACTCAAAATTGAAT+TGG - Chr7:90351733-90351752 MsG0780041387.01.T01:five_prime_UTR 30.0%
ATCATCATGATACCAAAGTA+AGG + Chr7:90346533-90346552 None:intergenic 30.0%
ATCCAAAATTTCCATCCATA+TGG + Chr7:90346500-90346519 None:intergenic 30.0%
ATGATCTTCATCTTTACCAT+TGG - Chr7:90345216-90345235 MsG0780041387.01.T01:intron 30.0%
ATTTGATCAATACATAAGGG+TGG + Chr7:90350388-90350407 None:intergenic 30.0%
CATTAAAAGTTAAGGTAGTC+GGG + Chr7:90348678-90348697 None:intergenic 30.0%
CATTATGAAAATTGTGCCTA+GGG + Chr7:90348311-90348330 None:intergenic 30.0%
CCTATAAAGTTAAAGCATGT+AGG + Chr7:90351374-90351393 None:intergenic 30.0%
CCTTGTATTTACCATAGTTT+GGG - Chr7:90346224-90346243 MsG0780041387.01.T01:intron 30.0%
CTTATGGATAGTTATATGGA+AGG - Chr7:90351526-90351545 MsG0780041387.01.T01:CDS 30.0%
GAATCTTCAAATGATAAGGT+TGG + Chr7:90349886-90349905 None:intergenic 30.0%
GATATCAATGAAACCTTGAA+AGG + Chr7:90351503-90351522 None:intergenic 30.0%
GATGAGAATTATGAATGTTG+TGG - Chr7:90351652-90351671 MsG0780041387.01.T01:five_prime_UTR 30.0%
GCATTAAAAGTTAAGGTAGT+CGG + Chr7:90348679-90348698 None:intergenic 30.0%
GTAAGCTGCATTAAAAGTTA+AGG + Chr7:90348686-90348705 None:intergenic 30.0%
GTACATGTAATTAGAGGAAA+AGG + Chr7:90346261-90346280 None:intergenic 30.0%
GTATACGTCATTTACTATGA+GGG + Chr7:90347485-90347504 None:intergenic 30.0%
TACTCAAATAACATACCATG+CGG + Chr7:90348129-90348148 None:intergenic 30.0%
TACTCTCCTATCTAATACAT+GGG + Chr7:90348780-90348799 None:intergenic 30.0%
TACTTCATAGCATTATCTGA+TGG - Chr7:90348520-90348539 MsG0780041387.01.T01:intron 30.0%
TACTTTGGTATCATGATGAT+AGG - Chr7:90346533-90346552 MsG0780041387.01.T01:intron 30.0%
TATCAGCTATCACAACAAAA+CGG + Chr7:90346902-90346921 None:intergenic 30.0%
TCCAAAAAAATTATTCCGTC+TGG + Chr7:90351154-90351173 None:intergenic 30.0%
TCCAAAAACTCTCACTTTAT+TGG + Chr7:90350930-90350949 None:intergenic 30.0%
TGATCTTCATCTTTACCATT+GGG - Chr7:90345217-90345236 MsG0780041387.01.T01:intron 30.0%
TGATGTTGGATGATGTTTAT+TGG - Chr7:90351007-90351026 MsG0780041387.01.T01:intron 30.0%
TGTACAAATATAAGCTGACA+TGG + Chr7:90351222-90351241 None:intergenic 30.0%
TTAAGATGATTATCCAAACG+GGG - Chr7:90345134-90345153 MsG0780041387.01.T01:intron 30.0%
TTAATGCCCATGTATTAGAT+AGG - Chr7:90348771-90348790 MsG0780041387.01.T01:CDS 30.0%
TTGAGTTTGACCATATGTTT+GGG - Chr7:90348851-90348870 MsG0780041387.01.T01:intron 30.0%
TTGGATGATGTTTATTGGAT+GGG - Chr7:90351012-90351031 MsG0780041387.01.T01:intron 30.0%
TTTGGATGAAGTTTATTGGA+TGG - Chr7:90350965-90350984 MsG0780041387.01.T01:CDS 30.0%
! AACCATATGGATGGAAATTT+TGG - Chr7:90346495-90346514 MsG0780041387.01.T01:intron 30.0%
! CAGTCTTATGGATAGTTATA+TGG - Chr7:90351522-90351541 MsG0780041387.01.T01:CDS 30.0%
! CCTACATGCTTTAACTTTAT+AGG - Chr7:90351371-90351390 MsG0780041387.01.T01:CDS 30.0%
! CTGAAATCGTTTTCTTTTCT+GGG - Chr7:90350577-90350596 MsG0780041387.01.T01:intron 30.0%
! TCGTTTTCTCTTTTCAATGT+AGG - Chr7:90347311-90347330 MsG0780041387.01.T01:intron 30.0%
! TTGGGAACTTTGTTTGTATA+GGG - Chr7:90349670-90349689 MsG0780041387.01.T01:intron 30.0%
! TTTGACTTCACCTTAATGAT+AGG + Chr7:90347175-90347194 None:intergenic 30.0%
!! AATATCATTTTCTGAAGAGG+AGG - Chr7:90350542-90350561 MsG0780041387.01.T01:intron 30.0%
!! AATTGAGAAGCATCAATTGA+TGG + Chr7:90344969-90344988 None:intergenic 30.0%
!! ATATCATTTTCTGAAGAGGA+GGG - Chr7:90350543-90350562 MsG0780041387.01.T01:intron 30.0%
!! TATTGGATGGATTTGTTGAT+GGG - Chr7:90350978-90350997 MsG0780041387.01.T01:CDS 30.0%
!! TCTGAAATCGTTTTCTTTTC+TGG - Chr7:90350576-90350595 MsG0780041387.01.T01:intron 30.0%
!! TTATTGGATGGATTTGTTGA+TGG - Chr7:90350977-90350996 MsG0780041387.01.T01:CDS 30.0%
!! TTCATTGACTTGTATTGCAA+GGG - Chr7:90345670-90345689 MsG0780041387.01.T01:intron 30.0%
!! TTTCTCTTGTTGTCTTGTTT+GGG + Chr7:90347394-90347413 None:intergenic 30.0%
!! TTTTCTCTTGTTGTCTTGTT+TGG + Chr7:90347395-90347414 None:intergenic 30.0%
!!! GAGTCCTGATTTTAAAACAT+AGG + Chr7:90351723-90351742 None:intergenic 30.0%
!!! TCCAGACGGAATAATTTTTT+TGG - Chr7:90351150-90351169 MsG0780041387.01.T01:intron 30.0%
!!! TTTGCATTTTTTGGGTTGAA+GGG + Chr7:90350084-90350103 None:intergenic 30.0%
!!! TTTTAGGTTTATGCACTTAC+TGG - Chr7:90344924-90344943 MsG0780041387.01.T01:intron 30.0%
!!! TTTTGCATTTTTTGGGTTGA+AGG + Chr7:90350085-90350104 None:intergenic 30.0%
AAAAAGAGGGCAAGGAAAAA+GGG - Chr7:90350694-90350713 MsG0780041387.01.T01:intron 35.0%
AAAAATCCTGTCCTTTGGAT+CGG - Chr7:90346466-90346485 MsG0780041387.01.T01:intron 35.0%
AAAAGTTAAAAGCTTTCGCC+AGG + Chr7:90351611-90351630 None:intergenic 35.0%
AAGGAGATATAGTTTCACCA+GGG + Chr7:90348042-90348061 None:intergenic 35.0%
AAGTAGAGTTTAGTGTGATG+TGG - Chr7:90345916-90345935 MsG0780041387.01.T01:intron 35.0%
AAGTATTTGACAGATCCTGT+GGG - Chr7:90345515-90345534 MsG0780041387.01.T01:intron 35.0%
AATAAGGGGAAGAGAAACAA+AGG - Chr7:90350755-90350774 MsG0780041387.01.T01:intron 35.0%
AATGAGGAATTAAAGATCCG+AGG + Chr7:90349746-90349765 None:intergenic 35.0%
AATTAGACATGATTACCCAC+AGG + Chr7:90345533-90345552 None:intergenic 35.0%
ACAAGAGAAAAGAGATGAAG+AGG - Chr7:90347404-90347423 MsG0780041387.01.T01:CDS 35.0%
ACCTCCAAAATTCAACGAAT+CGG + Chr7:90349414-90349433 None:intergenic 35.0%
ACGAATCGGGAATAAATGTA+CGG + Chr7:90349400-90349419 None:intergenic 35.0%
ACTTCATACATTTCTGCCAT+CGG - Chr7:90347455-90347474 MsG0780041387.01.T01:intron 35.0%
AGAAACAAAGGAAAGGGAAA+GGG - Chr7:90350767-90350786 MsG0780041387.01.T01:intron 35.0%
AGAGAACAAGGAGAAAAAGA+GGG - Chr7:90350681-90350700 MsG0780041387.01.T01:intron 35.0%
AGGGAAGAGTGAAAAATAAG+GGG - Chr7:90350741-90350760 MsG0780041387.01.T01:intron 35.0%
AGTAGAGTTTAGTGTGATGT+GGG - Chr7:90345917-90345936 MsG0780041387.01.T01:intron 35.0%
ATAACATGGAGAACTTCGTT+CGG + Chr7:90351438-90351457 None:intergenic 35.0%
ATAGTATAACGTCGAAGCAT+CGG - Chr7:90344576-90344595 MsG0780041387.01.T01:three_prime_UTR 35.0%
ATCAATACATAAGGGTGGTT+CGG + Chr7:90350383-90350402 None:intergenic 35.0%
ATCATCTTTACGAGCAGAAT+TGG + Chr7:90345201-90345220 None:intergenic 35.0%
ATCTCCAGAAACAGGTATAT+CGG - Chr7:90348981-90349000 MsG0780041387.01.T01:intron 35.0%
ATCTTGAAGATTCTAGTGAG+AGG + Chr7:90350488-90350507 None:intergenic 35.0%
ATGATGCATTATGTGATTCC+AGG - Chr7:90348877-90348896 MsG0780041387.01.T01:intron 35.0%
ATTGTAAGTGTCTGGCAATT+TGG - Chr7:90348171-90348190 MsG0780041387.01.T01:intron 35.0%
CAAAAAGAATAGCCGAGTTA+CGG - Chr7:90347538-90347557 MsG0780041387.01.T01:intron 35.0%
CACATTTCGCTCAAATAACA+GGG - Chr7:90351331-90351350 MsG0780041387.01.T01:CDS 35.0%
CAGAGAAAAGGACAAGATAA+GGG - Chr7:90350627-90350646 MsG0780041387.01.T01:intron 35.0%
CCCAAACTATGGTAAATACA+AGG + Chr7:90346227-90346246 None:intergenic 35.0%
CGGATCTTTAATTCCTCATT+TGG - Chr7:90349746-90349765 MsG0780041387.01.T01:intron 35.0%
CTAATAAGAACAACCTAAGC+TGG - Chr7:90345839-90345858 MsG0780041387.01.T01:intron 35.0%
CTTGCAATACAAGTCAATGA+AGG + Chr7:90345671-90345690 None:intergenic 35.0%
GAACAGTTGAGAAATTGAGA+GGG - Chr7:90344607-90344626 MsG0780041387.01.T01:three_prime_UTR 35.0%
GACATATGACTATGCAAACA+TGG - Chr7:90349925-90349944 MsG0780041387.01.T01:intron 35.0%
GACTGTCGTTAGACAATTTA+GGG + Chr7:90348228-90348247 None:intergenic 35.0%
GAGAAATTGAGAGGGAAAAT+TGG - Chr7:90344615-90344634 MsG0780041387.01.T01:three_prime_UTR 35.0%
GAGTAGTTATAGCAGAGAAA+AGG - Chr7:90350615-90350634 MsG0780041387.01.T01:intron 35.0%
GATAACAACTCCTAAGCTAA+TGG + Chr7:90347607-90347626 None:intergenic 35.0%
GGAGTTGTTATCAAGATTCA+AGG - Chr7:90347615-90347634 MsG0780041387.01.T01:intron 35.0%
GGATTTGAAAATTCTGGGTT+TGG - Chr7:90350947-90350966 MsG0780041387.01.T01:CDS 35.0%
GTTGAGTTTGACCATATGTT+TGG - Chr7:90348850-90348869 MsG0780041387.01.T01:intron 35.0%
GTTGGATGATGTTTATTGGA+TGG - Chr7:90351011-90351030 MsG0780041387.01.T01:intron 35.0%
TAAAAAGAAGAATCCCCTCA+CGG + Chr7:90346444-90346463 None:intergenic 35.0%
TAAACCAAAACTCGCTCAAA+TGG + Chr7:90349840-90349859 None:intergenic 35.0%
TAATTCATTTGTCTCCTCCT+TGG + Chr7:90346853-90346872 None:intergenic 35.0%
TACATGGGCATTAAGAAAGA+TGG + Chr7:90348765-90348784 None:intergenic 35.0%
TAGGTAGATAAAGCAGAATC+AGG + Chr7:90346822-90346841 None:intergenic 35.0%
TATACCGATATACCTGTTTC+TGG + Chr7:90348988-90349007 None:intergenic 35.0%
TCCAACATGTTTCCTTAATG+TGG + Chr7:90346333-90346352 None:intergenic 35.0%
TGACTGTCGTTAGACAATTT+AGG + Chr7:90348229-90348248 None:intergenic 35.0%
TGATTGATATGATTCTGCTC+AGG + Chr7:90346001-90346020 None:intergenic 35.0%
TGCAACACATCCTATCATTA+AGG - Chr7:90347162-90347181 MsG0780041387.01.T01:intron 35.0%
TGCATAGTCATATGTCATGA+AGG + Chr7:90349921-90349940 None:intergenic 35.0%
TGGGTTTGGATGAAGTTTAT+TGG - Chr7:90350961-90350980 MsG0780041387.01.T01:CDS 35.0%
TGTTCCTATGAAACCCTAAA+TGG - Chr7:90344692-90344711 MsG0780041387.01.T01:three_prime_UTR 35.0%
TTGTAAGTGTCTGGCAATTT+GGG - Chr7:90348172-90348191 MsG0780041387.01.T01:intron 35.0%
! AAAACTTCATTTTGTGGCAC+TGG - Chr7:90348391-90348410 MsG0780041387.01.T01:intron 35.0%
! AAAGTATTTGACAGATCCTG+TGG - Chr7:90345514-90345533 MsG0780041387.01.T01:intron 35.0%
! AATCGTTTTCTTTTCTGGGT+TGG - Chr7:90350581-90350600 MsG0780041387.01.T01:intron 35.0%
! ACGGGGTTATTATGTTTTTC+AGG - Chr7:90345151-90345170 MsG0780041387.01.T01:intron 35.0%
! AGTTTCCCCTCTATTGTTTT+AGG - Chr7:90349324-90349343 MsG0780041387.01.T01:intron 35.0%
! ATTTGGGGCAACAAAATTTG+TGG - Chr7:90347876-90347895 MsG0780041387.01.T01:intron 35.0%
! CAAATTTTGTTGCCCCAAAT+TGG + Chr7:90347876-90347895 None:intergenic 35.0%
! CTTGGGAACTTTGTTTGTAT+AGG - Chr7:90349669-90349688 MsG0780041387.01.T01:intron 35.0%
! CTTGTTATGATATATGTGGC+AGG - Chr7:90349198-90349217 MsG0780041387.01.T01:intron 35.0%
! GCAATTCATGTTTTCTTTCC+TGG - Chr7:90351590-90351609 MsG0780041387.01.T01:CDS 35.0%
! GCCAATAAAGTGAGAGTTTT+TGG - Chr7:90350926-90350945 MsG0780041387.01.T01:CDS 35.0%
! TACCAATACACCATTAGCTT+AGG - Chr7:90347594-90347613 MsG0780041387.01.T01:intron 35.0%
! TGATGTTTATTGGATGGGTT+TGG - Chr7:90351017-90351036 MsG0780041387.01.T01:intron 35.0%
! TGATTTGTAGAGCCACATTA+AGG - Chr7:90346318-90346337 MsG0780041387.01.T01:intron 35.0%
! TGGGAACTTTGTTTGTATAG+GGG - Chr7:90349671-90349690 MsG0780041387.01.T01:intron 35.0%
! TTCTTTTGCCAAGTACAACA+AGG - Chr7:90345361-90345380 MsG0780041387.01.T01:intron 35.0%
! TTTAGCTACCTTGTTGTACT+TGG + Chr7:90345372-90345391 None:intergenic 35.0%
! TTTTTGAACAGGGGTGATAT+GGG + Chr7:90350247-90350266 None:intergenic 35.0%
!! ATAGACGGTGTTATCAATGT+TGG - Chr7:90350857-90350876 MsG0780041387.01.T01:CDS 35.0%
!! ATTCCCGATTCGTTGAATTT+TGG - Chr7:90349407-90349426 MsG0780041387.01.T01:intron 35.0%
!! CTTCATTGACTTGTATTGCA+AGG - Chr7:90345669-90345688 MsG0780041387.01.T01:intron 35.0%
!! GATAGGAGAGTATTATCTTG+AGG - Chr7:90348788-90348807 MsG0780041387.01.T01:intron 35.0%
!! GTTCTGAAATTGTAAGTGTC+TGG - Chr7:90348163-90348182 MsG0780041387.01.T01:intron 35.0%
!! GTTTTGTTGTGATAGCTGAT+AGG - Chr7:90346901-90346920 MsG0780041387.01.T01:CDS 35.0%
!! TACTATTACTGGTTGGTCTT+GGG - Chr7:90349652-90349671 MsG0780041387.01.T01:intron 35.0%
!!! AGGTTTTCTCTGAGATTCTT+TGG + Chr7:90344790-90344809 None:intergenic 35.0%
!!! CACAACTCTGCTTTAGTTTT+TGG - Chr7:90346019-90346038 MsG0780041387.01.T01:intron 35.0%
!!! CTACTGACACATTTGTTTTG+TGG - Chr7:90349362-90349381 MsG0780041387.01.T01:intron 35.0%
!!! GGTTTTCTCTGAGATTCTTT+GGG + Chr7:90344789-90344808 None:intergenic 35.0%
!!! TGACACATTTGTTTTGTGGT+GGG - Chr7:90349366-90349385 MsG0780041387.01.T01:intron 35.0%
!!! TTATGTGTCGCTTCTTTTTC+AGG - Chr7:90345301-90345320 MsG0780041387.01.T01:intron 35.0%
!!! TTGATGGGTTTTGTTGATGT+TGG - Chr7:90350993-90351012 MsG0780041387.01.T01:intron 35.0%
!!! TTTTTCAGGTTACTTGGCAA+TGG - Chr7:90345165-90345184 MsG0780041387.01.T01:intron 35.0%
AAATGGGAAGTAGAAGGGTT+TGG + Chr7:90350220-90350239 None:intergenic 40.0%
AACGAGTTACTATCACCACA+TGG + Chr7:90347296-90347315 None:intergenic 40.0%
AATATCCTTCGCGTCCATTT+AGG + Chr7:90344709-90344728 None:intergenic 40.0%
AATCAAAGAAATTTGGGGGG+TGG + Chr7:90349172-90349191 None:intergenic 40.0%
AATGGACCTGGTTATTTGCA+AGG - Chr7:90346626-90346645 MsG0780041387.01.T01:intron 40.0%
AATGGGAAGTAGAAGGGTTT+GGG + Chr7:90350219-90350238 None:intergenic 40.0%
AATGTATCGAGCTGTGATTG+TGG - Chr7:90345643-90345662 MsG0780041387.01.T01:intron 40.0%
ACAAGAAATGGAGCGAAAAC+GGG - Chr7:90347350-90347369 MsG0780041387.01.T01:CDS 40.0%
ACCTAACACAACTTTCCTCT+GGG + Chr7:90348354-90348373 None:intergenic 40.0%
ACCTAGAAAACAAAAGGCCT+CGG - Chr7:90349726-90349745 MsG0780041387.01.T01:intron 40.0%
ACGAGCCTAAAACAATAGAG+GGG + Chr7:90349332-90349351 None:intergenic 40.0%
AGCAAACATTGCAAGATCTC+GGG - Chr7:90348646-90348665 MsG0780041387.01.T01:intron 40.0%
AGTTCTCCATGTTATCTGTC+AGG - Chr7:90351443-90351462 MsG0780041387.01.T01:intron 40.0%
ATATCCTTCGCGTCCATTTA+GGG + Chr7:90344708-90344727 None:intergenic 40.0%
ATCAAAGAAATTTGGGGGGT+GGG + Chr7:90349171-90349190 None:intergenic 40.0%
ATGTATCGAGCTGTGATTGT+GGG - Chr7:90345644-90345663 MsG0780041387.01.T01:intron 40.0%
ATTGAGAGGGAAAATTGGAG+CGG - Chr7:90344620-90344639 MsG0780041387.01.T01:three_prime_UTR 40.0%
ATTGCACCTGACAGATAACA+TGG + Chr7:90351452-90351471 None:intergenic 40.0%
CAAAAAGGACCAAAAACGCA+AGG - Chr7:90349549-90349568 MsG0780041387.01.T01:intron 40.0%
CAAAACCTCCAAGAGTTTGA+TGG + Chr7:90351685-90351704 None:intergenic 40.0%
CACAAGAAATGGAGCGAAAA+CGG - Chr7:90347349-90347368 MsG0780041387.01.T01:CDS 40.0%
CACGAGCCTAAAACAATAGA+GGG + Chr7:90349333-90349352 None:intergenic 40.0%
CATCATCAAATACACAGACG+AGG - Chr7:90345484-90345503 MsG0780041387.01.T01:intron 40.0%
CATGCAAACGAAAATGTGCA+CGG + Chr7:90347736-90347755 None:intergenic 40.0%
CCACATTTCGCTCAAATAAC+AGG - Chr7:90351330-90351349 MsG0780041387.01.T01:CDS 40.0%
CCTCCAAAATTCAACGAATC+GGG + Chr7:90349413-90349432 None:intergenic 40.0%
CGAACAGTTGAGAAATTGAG+AGG - Chr7:90344606-90344625 MsG0780041387.01.T01:three_prime_UTR 40.0%
CGGATAGTTAACCATATGGA+TGG - Chr7:90346486-90346505 MsG0780041387.01.T01:intron 40.0%
CTCACTGTCATTACCCAATT+TGG + Chr7:90346370-90346389 None:intergenic 40.0%
CTCCTAAGCTAATGGTGTAT+TGG + Chr7:90347599-90347618 None:intergenic 40.0%
CTGCTTTATCTACCTAGACA+TGG - Chr7:90346826-90346845 MsG0780041387.01.T01:intron 40.0%
GAAAAAGAGGGCAAGGAAAA+AGG - Chr7:90350693-90350712 MsG0780041387.01.T01:intron 40.0%
GAAGGAGATATAGTTTCACC+AGG + Chr7:90348043-90348062 None:intergenic 40.0%
GAATCTCAGAGAAAACCTGA+TGG - Chr7:90344792-90344811 MsG0780041387.01.T01:CDS 40.0%
GAATGTGCAACTTCCACAAA+TGG - Chr7:90348063-90348082 MsG0780041387.01.T01:intron 40.0%
GAGAAACAAAGGAAAGGGAA+AGG - Chr7:90350766-90350785 MsG0780041387.01.T01:intron 40.0%
GAGAGAACAAGGAGAAAAAG+AGG - Chr7:90350680-90350699 MsG0780041387.01.T01:intron 40.0%
GAGCAAACATTGCAAGATCT+CGG - Chr7:90348645-90348664 MsG0780041387.01.T01:intron 40.0%
GAGGAGGATAAAGATGTTTG+TGG - Chr7:90350816-90350835 MsG0780041387.01.T01:CDS 40.0%
GAGGATAAAGATGTTTGTGG+TGG - Chr7:90350819-90350838 MsG0780041387.01.T01:CDS 40.0%
GATGAAGATCAAGATGAACC+TGG - Chr7:90351060-90351079 MsG0780041387.01.T01:intron 40.0%
GATGTTACAAGGTTGGAATC+TGG - Chr7:90351278-90351297 MsG0780041387.01.T01:intron 40.0%
GCAAAAGAATAGTCTCCAGT+AGG + Chr7:90345350-90345369 None:intergenic 40.0%
GCAGAGAAAAGGACAAGATA+AGG - Chr7:90350626-90350645 MsG0780041387.01.T01:intron 40.0%
GCATCATGAACCCAAACATA+TGG + Chr7:90348864-90348883 None:intergenic 40.0%
GCCACATTAAGGAAACATGT+TGG - Chr7:90346329-90346348 MsG0780041387.01.T01:intron 40.0%
GGAAAGTTGTGTTAGGTAGT+AGG - Chr7:90348357-90348376 MsG0780041387.01.T01:intron 40.0%
GGATCGGATAGTTAACCATA+TGG - Chr7:90346482-90346501 MsG0780041387.01.T01:intron 40.0%
GGGAAGAGAAACAAAGGAAA+GGG - Chr7:90350761-90350780 MsG0780041387.01.T01:intron 40.0%
GGTTACTGAACAGTCTCAAT+TGG - Chr7:90347973-90347992 MsG0780041387.01.T01:intron 40.0%
GTACTTGCATATTTGTGCCT+GGG - Chr7:90347927-90347946 MsG0780041387.01.T01:intron 40.0%
TACCTAACACAACTTTCCTC+TGG + Chr7:90348355-90348374 None:intergenic 40.0%
TACTTTCCGCTGAAGGATAT+TGG - Chr7:90345800-90345819 MsG0780041387.01.T01:intron 40.0%
TAGGTTTATGCACTTACTGG+TGG - Chr7:90344927-90344946 MsG0780041387.01.T01:intron 40.0%
TCACGAGCCTAAAACAATAG+AGG + Chr7:90349334-90349353 None:intergenic 40.0%
TGATGCAGAAGTTACAGAGA+GGG - Chr7:90348012-90348031 MsG0780041387.01.T01:intron 40.0%
TGGTTAACTATCCGATCCAA+AGG + Chr7:90346480-90346499 None:intergenic 40.0%
TGTACTTGCATATTTGTGCC+TGG - Chr7:90347926-90347945 MsG0780041387.01.T01:intron 40.0%
TTACATAGTCTCTAACCCAG+AGG - Chr7:90348336-90348355 MsG0780041387.01.T01:intron 40.0%
TTACGAGCAGAATTGGTGAA+AGG + Chr7:90345194-90345213 None:intergenic 40.0%
TTACTATCACCACATGGCAA+TGG + Chr7:90347290-90347309 None:intergenic 40.0%
TTACTATGAGGGTAAACCGA+TGG + Chr7:90347474-90347493 None:intergenic 40.0%
! ACTATGCAAACATGGTGATG+TGG - Chr7:90349933-90349952 MsG0780041387.01.T01:intron 40.0%
! ACTTTGTTTGTATAGGGGCA+TGG - Chr7:90349676-90349695 MsG0780041387.01.T01:intron 40.0%
! CCTGTTATTTGAGCGAAATG+TGG + Chr7:90351333-90351352 None:intergenic 40.0%
! CTGTACGGATGGGATTTTTA+AGG - Chr7:90346396-90346415 MsG0780041387.01.T01:intron 40.0%
! GCATCAATTGATGGCATAAG+AGG + Chr7:90344960-90344979 None:intergenic 40.0%
! GTGCACATTTTCGTTTGCAT+GGG - Chr7:90347735-90347754 MsG0780041387.01.T01:CDS 40.0%
! GTTCAAACCTTTTCGTGAGT+AGG + Chr7:90345005-90345024 None:intergenic 40.0%
! GTTTTTGAACAGGGGTGATA+TGG + Chr7:90350248-90350267 None:intergenic 40.0%
! TATGGTGTACCTTGCGTTTT+TGG + Chr7:90349561-90349580 None:intergenic 40.0%
! TCAATTGATGGCATAAGAGG+TGG + Chr7:90344957-90344976 None:intergenic 40.0%
! TCTGCACAAACAGCTTTTGT+TGG + Chr7:90348923-90348942 None:intergenic 40.0%
! TTTTGAACAGGGGTGATATG+GGG + Chr7:90350246-90350265 None:intergenic 40.0%
!! AAACTGTTGTTTCAGGCGAA+AGG - Chr7:90349521-90349540 MsG0780041387.01.T01:intron 40.0%
!! AAAGAGTATCAAGGTATGGG+TGG + Chr7:90350316-90350335 None:intergenic 40.0%
!! AACTGTTGTTTCAGGCGAAA+GGG - Chr7:90349522-90349541 MsG0780041387.01.T01:intron 40.0%
!! GTACTATTACTGGTTGGTCT+TGG - Chr7:90349651-90349670 MsG0780041387.01.T01:intron 40.0%
!! TCTTTTCTGGGTTGGAAAAG+TGG - Chr7:90350589-90350608 MsG0780041387.01.T01:intron 40.0%
!! TGGTATGCTGAGTTGACTTT+TGG - Chr7:90349953-90349972 MsG0780041387.01.T01:intron 40.0%
!! TTTCAGGTTCGAGTAGTCAA+TGG - Chr7:90345317-90345336 MsG0780041387.01.T01:intron 40.0%
!! TTTCTCTGAGATTCTTTGGG+AGG + Chr7:90344786-90344805 None:intergenic 40.0%
!!! ATTGTTTTAGGCTCGTGATC+TGG - Chr7:90349336-90349355 MsG0780041387.01.T01:intron 40.0%
!!! CATTTTTTGGGTTGAAGGGT+TGG + Chr7:90350080-90350099 None:intergenic 40.0%
!!! CTGACACATTTGTTTTGTGG+TGG - Chr7:90349365-90349384 MsG0780041387.01.T01:intron 40.0%
!!! TCTGCTTTAGTTTTTGGCGA+TGG - Chr7:90346025-90346044 MsG0780041387.01.T01:intron 40.0%
!!! TTTGTTTTGTGGTGGGAATC+AGG - Chr7:90349373-90349392 MsG0780041387.01.T01:intron 40.0%
AAAGCCTCCTACTCACGAAA+AGG - Chr7:90344995-90345014 MsG0780041387.01.T01:intron 45.0%
AACTATCCGATCCAAAGGAC+AGG + Chr7:90346475-90346494 None:intergenic 45.0%
AAGAATAGCCGAGTTACGGA+TGG - Chr7:90347542-90347561 MsG0780041387.01.T01:intron 45.0%
AATACGGCAATGGAGAAGGA+AGG + Chr7:90350354-90350373 None:intergenic 45.0%
ACAAGGAGAAAAAGAGGGCA+AGG - Chr7:90350686-90350705 MsG0780041387.01.T01:intron 45.0%
ACCCAGAGGAAAGTTGTGTT+AGG - Chr7:90348350-90348369 MsG0780041387.01.T01:intron 45.0%
ACTGAGCGTTATCTCTTGTG+AGG - Chr7:90346077-90346096 MsG0780041387.01.T01:intron 45.0%
AGAGGTCCTTGCAAATAACC+AGG + Chr7:90346635-90346654 None:intergenic 45.0%
AGGGAAACGAAGAAGGAGAA+AGG - Chr7:90350721-90350740 MsG0780041387.01.T01:intron 45.0%
AGTATCAAGGTATGGGTGGA+AGG + Chr7:90350312-90350331 None:intergenic 45.0%
ATCACGGAACGATGAACCTT+CGG + Chr7:90349239-90349258 None:intergenic 45.0%
ATCTACCTAGACATGGACCA+AGG - Chr7:90346833-90346852 MsG0780041387.01.T01:intron 45.0%
ATGGACGCGAAGGATATTCT+TGG - Chr7:90344711-90344730 MsG0780041387.01.T01:three_prime_UTR 45.0%
ATGGGAAGTAGAAGGGTTTG+GGG + Chr7:90350218-90350237 None:intergenic 45.0%
CAAAACTCGCTCAAATGGCA+GGG + Chr7:90349835-90349854 None:intergenic 45.0%
CCTCTAACAGAGCTACTTGA+CGG + Chr7:90348263-90348282 None:intergenic 45.0%
CTGATAGGTTCCCATCATCT+CGG - Chr7:90346916-90346935 MsG0780041387.01.T01:CDS 45.0%
CTGATGCAGAAGTTACAGAG+AGG - Chr7:90348011-90348030 MsG0780041387.01.T01:intron 45.0%
CTGGAGTTCGGACTATCAAA+CGG - Chr7:90348619-90348638 MsG0780041387.01.T01:intron 45.0%
CTTAGAAGCCATCCGTAACT+CGG + Chr7:90347553-90347572 None:intergenic 45.0%
GAAGAATACGGCAATGGAGA+AGG + Chr7:90350358-90350377 None:intergenic 45.0%
GACAGTGAGAGACAACTGTA+CGG - Chr7:90346381-90346400 MsG0780041387.01.T01:intron 45.0%
GACATATGCACTCGAGCAAA+TGG - Chr7:90348575-90348594 MsG0780041387.01.T01:CDS 45.0%
GACGTAAGCACTTGTGAAGA+GGG - Chr7:90345048-90345067 MsG0780041387.01.T01:intron 45.0%
GAGCAGATGAAGGAGATAAG+GGG + Chr7:90350058-90350077 None:intergenic 45.0%
GATAGCAGCCATCAAACTCT+TGG - Chr7:90351674-90351693 MsG0780041387.01.T01:five_prime_UTR 45.0%
GCAAACATTGCAAGATCTCG+GGG - Chr7:90348647-90348666 MsG0780041387.01.T01:intron 45.0%
GCATATTGTGACTGACCCAA+TGG + Chr7:90345235-90345254 None:intergenic 45.0%
GGAGCAGATGAAGGAGATAA+GGG + Chr7:90350059-90350078 None:intergenic 45.0%
GGCAAGGAAAAAGGGAAGAA+GGG - Chr7:90350702-90350721 MsG0780041387.01.T01:intron 45.0%
GGGAAACGAAGAAGGAGAAA+GGG - Chr7:90350722-90350741 MsG0780041387.01.T01:intron 45.0%
GGGGAAGAGAAACAAAGGAA+AGG - Chr7:90350760-90350779 MsG0780041387.01.T01:intron 45.0%
GGTGGAAATGGGAAGTAGAA+GGG + Chr7:90350225-90350244 None:intergenic 45.0%
GTCAATGGTGTTCTACCTAC+TGG - Chr7:90345332-90345351 MsG0780041387.01.T01:intron 45.0%
GTGCAATATAAAGAGGCCGA+AGG - Chr7:90349220-90349239 MsG0780041387.01.T01:intron 45.0%
GTGGCAGGTGCAATATAAAG+AGG - Chr7:90349213-90349232 MsG0780041387.01.T01:intron 45.0%
GTTATCTGTCAGGTGCAATG+TGG - Chr7:90351453-90351472 MsG0780041387.01.T01:intron 45.0%
TAAGGGGTTAGAGGAGATGA+AGG + Chr7:90350042-90350061 None:intergenic 45.0%
TATCCTTCAGCGGAAAGTAG+AGG + Chr7:90345799-90345818 None:intergenic 45.0%
TCAAAGAAATTTGGGGGGTG+GGG + Chr7:90349170-90349189 None:intergenic 45.0%
TCGGACTGTAGAGGAGTTAA+AGG - Chr7:90346935-90346954 MsG0780041387.01.T01:CDS 45.0%
TCGGTTGAAGAATACGGCAA+TGG + Chr7:90350364-90350383 None:intergenic 45.0%
TCTGAAGAGGAGGGATCTAA+AGG - Chr7:90350552-90350571 MsG0780041387.01.T01:intron 45.0%
TGAAGGAGATAAGGGGTTAG+AGG + Chr7:90350051-90350070 None:intergenic 45.0%
TGACGTAAGCACTTGTGAAG+AGG - Chr7:90345047-90345066 MsG0780041387.01.T01:intron 45.0%
TGAGAGACAACTGTACGGAT+GGG - Chr7:90346386-90346405 MsG0780041387.01.T01:intron 45.0%
TGCTGGTGTATCACGTTAAG+CGG - Chr7:90348283-90348302 MsG0780041387.01.T01:CDS 45.0%
TGGAGCAGATGAAGGAGATA+AGG + Chr7:90350060-90350079 None:intergenic 45.0%
TGGAGTTCGGACTATCAAAC+GGG - Chr7:90348620-90348639 MsG0780041387.01.T01:intron 45.0%
TGTGGAAGTTGCACATTCGA+AGG + Chr7:90348061-90348080 None:intergenic 45.0%
TTCAAGGACTGTACCAGCTT+AGG + Chr7:90345855-90345874 None:intergenic 45.0%
TTGAACCATTGCTACCGTGA+GGG - Chr7:90346427-90346446 MsG0780041387.01.T01:intron 45.0%
TTGGCTGAATCTCCAGAAAC+AGG - Chr7:90348973-90348992 MsG0780041387.01.T01:intron 45.0%
TTTCACCGTAGGATCCATCA+CGG + Chr7:90349255-90349274 None:intergenic 45.0%
TTTGAACCATTGCTACCGTG+AGG - Chr7:90346426-90346445 MsG0780041387.01.T01:intron 45.0%
! ACAGCTTTTGTTGGAACCCT+CGG + Chr7:90348914-90348933 None:intergenic 45.0%
! ACCATAGTTTGGGACGTCTT+GGG - Chr7:90346234-90346253 MsG0780041387.01.T01:intron 45.0%
! AGGCGAAAGGGTTAGCAAAA+AGG - Chr7:90349534-90349553 MsG0780041387.01.T01:intron 45.0%
! CAAACCTTTTCGTGAGTAGG+AGG + Chr7:90345002-90345021 None:intergenic 45.0%
! CACATTTTCGTTTGCATGGG+AGG - Chr7:90347738-90347757 MsG0780041387.01.T01:CDS 45.0%
! CCAGGTCAATTTGAAACCGA+GGG - Chr7:90348895-90348914 MsG0780041387.01.T01:intron 45.0%
! CGTGCACATTTTCGTTTGCA+TGG - Chr7:90347734-90347753 MsG0780041387.01.T01:CDS 45.0%
! CTTTTATGAGCTGCTGTAGG+TGG + Chr7:90349706-90349725 None:intergenic 45.0%
! GCAGAAGGTACAACCATTTG+TGG + Chr7:90348079-90348098 None:intergenic 45.0%
! GCGTCCATTTAGGGTTTCAT+AGG + Chr7:90344699-90344718 None:intergenic 45.0%
! GGTCTTTTATGAGCTGCTGT+AGG + Chr7:90349709-90349728 None:intergenic 45.0%
! GGTGTTATCAATGTTGGTGG+TGG - Chr7:90350863-90350882 MsG0780041387.01.T01:CDS 45.0%
! GTGGCTCTACAAATCATCAC+TGG + Chr7:90346314-90346333 None:intergenic 45.0%
! TACCATAGTTTGGGACGTCT+TGG - Chr7:90346233-90346252 MsG0780041387.01.T01:intron 45.0%
! TCCAGGTCAATTTGAAACCG+AGG - Chr7:90348894-90348913 MsG0780041387.01.T01:intron 45.0%
! TTTGATAGTCCGAACTCCAG+CGG + Chr7:90348619-90348638 None:intergenic 45.0%
!! AACTGGTCTTGGTGGAAAAG+AGG - Chr7:90350893-90350912 MsG0780041387.01.T01:CDS 45.0%
!! AAGGAAGGTGGTGATGGATT+TGG + Chr7:90350293-90350312 None:intergenic 45.0%
!! AGGAAGGTGGTGATGGATTT+GGG + Chr7:90350292-90350311 None:intergenic 45.0%
!! CCCGATTCGTTGAATTTTGG+AGG - Chr7:90349410-90349429 MsG0780041387.01.T01:intron 45.0%
!! CTTGTTGTCTTGTTTGGGAG+AGG + Chr7:90347389-90347408 None:intergenic 45.0%
!! GACGGTGTTATCAATGTTGG+TGG - Chr7:90350860-90350879 MsG0780041387.01.T01:CDS 45.0%
!! GGTGGTTCGGTTGAAGAATA+CGG + Chr7:90350370-90350389 None:intergenic 45.0%
!! GTAGAGGCATTATCTGCAGA+AGG + Chr7:90348094-90348113 None:intergenic 45.0%
!! GTTATCAATGTTGGTGGTGG+TGG - Chr7:90350866-90350885 MsG0780041387.01.T01:CDS 45.0%
!!! TCCGAGGCCTTTTGTTTTCT+AGG + Chr7:90349730-90349749 None:intergenic 45.0%
!!! TTTTTTATTTTTTATTTAGA+GGG - Chr7:90351303-90351322 MsG0780041387.01.T01:intron 5.0%
!!! TTTTTTTATTTTTTATTTAG+AGG - Chr7:90351302-90351321 MsG0780041387.01.T01:intron 5.0%
AAGCCTCTACTTTCCGCTGA+AGG - Chr7:90345793-90345812 MsG0780041387.01.T01:intron 50.0%
ACATGGCAATGGCTTAAGGC+AGG + Chr7:90347279-90347298 None:intergenic 50.0%
ACCCAAGACGTCCCAAACTA+TGG + Chr7:90346238-90346257 None:intergenic 50.0%
AGAACGGAGAGAGAAGAGAG+AGG - Chr7:90350797-90350816 MsG0780041387.01.T01:CDS 50.0%
AGAGAGAGAGAGAGAGGAGA+GGG + Chr7:90350452-90350471 None:intergenic 50.0%
AGCAGCCATCAAACTCTTGG+AGG - Chr7:90351677-90351696 MsG0780041387.01.T01:five_prime_UTR 50.0%
AGGATGTGTTGCAATGTCCC+CGG + Chr7:90347155-90347174 None:intergenic 50.0%
AGTGTCGTCTGTGCCAAATG+AGG + Chr7:90349762-90349781 None:intergenic 50.0%
ATCACGTTAAGCGGAACCCT+AGG - Chr7:90348292-90348311 MsG0780041387.01.T01:CDS 50.0%
CAAACTCAACCGCTGGAGTT+CGG - Chr7:90348607-90348626 MsG0780041387.01.T01:intron 50.0%
CAAAGAAATTTGGGGGGTGG+GGG + Chr7:90349169-90349188 None:intergenic 50.0%
CAAGCTTCAAACTCAACCGC+TGG - Chr7:90348600-90348619 MsG0780041387.01.T01:intron 50.0%
CACCACATGGCAATGGCTTA+AGG + Chr7:90347283-90347302 None:intergenic 50.0%
CCAAAACTCGCTCAAATGGC+AGG + Chr7:90349836-90349855 None:intergenic 50.0%
CCCTCGGTTTCAAATTGACC+TGG + Chr7:90348898-90348917 None:intergenic 50.0%
CCTCTACAGTCCGAGATGAT+GGG + Chr7:90346929-90346948 None:intergenic 50.0%
CGAGTTACGGATGGCTTCTA+AGG - Chr7:90347551-90347570 MsG0780041387.01.T01:intron 50.0%
CTAACAGAGCTACTTGACGG+AGG + Chr7:90348260-90348279 None:intergenic 50.0%
CTGTCAGGTGCAATGTGGAA+AGG - Chr7:90351458-90351477 MsG0780041387.01.T01:intron 50.0%
GAAACCCTAAATGGACGCGA+AGG - Chr7:90344701-90344720 MsG0780041387.01.T01:three_prime_UTR 50.0%
GAAGGTTCATCGTTCCGTGA+TGG - Chr7:90349238-90349257 MsG0780041387.01.T01:intron 50.0%
GGGAAAGGGAGTAGAGAGAA+CGG - Chr7:90350781-90350800 MsG0780041387.01.T01:intron 50.0%
GGGAAGAAGGGAAACGAAGA+AGG - Chr7:90350714-90350733 MsG0780041387.01.T01:intron 50.0%
GGGCAAGGAAAAAGGGAAGA+AGG - Chr7:90350701-90350720 MsG0780041387.01.T01:intron 50.0%
GGGTGATATGGGGTGGAAAT+GGG + Chr7:90350236-90350255 None:intergenic 50.0%
GGGTGGAAATGGGAAGTAGA+AGG + Chr7:90350226-90350245 None:intergenic 50.0%
GTGAGAGACAACTGTACGGA+TGG - Chr7:90346385-90346404 MsG0780041387.01.T01:intron 50.0%
TACCTAGACATGGACCAAGG+AGG - Chr7:90346836-90346855 MsG0780041387.01.T01:intron 50.0%
TCAAGGTATGGGTGGAAGGA+AGG + Chr7:90350308-90350327 None:intergenic 50.0%
TCATTTGGCACAGACGACAC+TGG - Chr7:90349761-90349780 MsG0780041387.01.T01:intron 50.0%
TCCTCTACAGTCCGAGATGA+TGG + Chr7:90346930-90346949 None:intergenic 50.0%
TCTCCTCTCTCTCTCTCTCT+GGG - Chr7:90350452-90350471 MsG0780041387.01.T01:intron 50.0%
TGAAACACCAGGCACACCAA+AGG - Chr7:90349270-90349289 MsG0780041387.01.T01:intron 50.0%
TGAACCATTGCTACCGTGAG+GGG - Chr7:90346428-90346447 MsG0780041387.01.T01:intron 50.0%
TGAAGGGTTGGAGCAGATGA+AGG + Chr7:90350068-90350087 None:intergenic 50.0%
TGCCTTAAGCCATTGCCATG+TGG - Chr7:90347278-90347297 MsG0780041387.01.T01:intron 50.0%
TGGGGTGCAGTGTACAAAAG+AGG + Chr7:90346653-90346672 None:intergenic 50.0%
! AAGATGTTTGTGGTGGTGCG+TGG - Chr7:90350826-90350845 MsG0780041387.01.T01:CDS 50.0%
! AAGTAGAAGGGTTTGGGGCT+GGG + Chr7:90350213-90350232 None:intergenic 50.0%
! AGTAGCTCTGTTAGAGGTGC+TGG - Chr7:90348266-90348285 MsG0780041387.01.T01:CDS 50.0%
! CCGTCAAGTAGCTCTGTTAG+AGG - Chr7:90348260-90348279 MsG0780041387.01.T01:CDS 50.0%
! GCGGGCTATATTACTTGCCA+GGG - Chr7:90347120-90347139 MsG0780041387.01.T01:intron 50.0%
! TACTCTAGCTTCTCTCCGCA+TGG - Chr7:90348111-90348130 MsG0780041387.01.T01:intron 50.0%
! TCTTGTTTGGGAGAGGACCA+TGG + Chr7:90347382-90347401 None:intergenic 50.0%
! TGCGGGCTATATTACTTGCC+AGG - Chr7:90347119-90347138 MsG0780041387.01.T01:intron 50.0%
!! ATCAATGTTGGTGGTGGTGG+TGG - Chr7:90350869-90350888 MsG0780041387.01.T01:CDS 50.0%
!! CCTGCCATTTGAGCGAGTTT+TGG - Chr7:90349833-90349852 MsG0780041387.01.T01:intron 50.0%
!! GGAAGGTGGTGATGGATTTG+GGG + Chr7:90350291-90350310 None:intergenic 50.0%
!! GTATAACGTCGAAGCATCGG+AGG - Chr7:90344579-90344598 MsG0780041387.01.T01:three_prime_UTR 50.0%
!! TCGTTCCGTGATGGATCCTA+CGG - Chr7:90349247-90349266 MsG0780041387.01.T01:intron 50.0%
!! TGCGTGGTGGTACTGATAGA+CGG - Chr7:90350842-90350861 MsG0780041387.01.T01:CDS 50.0%
AACCCCAGAGAGAGAGAGAG+AGG + Chr7:90350458-90350477 None:intergenic 55.0%
ACACCAGGCACACCAAAGGT+CGG - Chr7:90349274-90349293 MsG0780041387.01.T01:intron 55.0%
ACCTCGCGTGAAATGCCATC+AGG + Chr7:90344810-90344829 None:intergenic 55.0%
ACCTGATGGCATTTCACGCG+AGG - Chr7:90344806-90344825 MsG0780041387.01.T01:CDS 55.0%
ACGGAGAGAGAAGAGAGAGG+AGG - Chr7:90350800-90350819 MsG0780041387.01.T01:CDS 55.0%
AGAGAGAGAGAGAGGAGAGG+GGG + Chr7:90350450-90350469 None:intergenic 55.0%
AGGTATGGGTGGAAGGAAGG+TGG + Chr7:90350305-90350324 None:intergenic 55.0%
CAGAGAGAGAGAGAGAGGAG+AGG + Chr7:90350453-90350472 None:intergenic 55.0%
CCCATCATCTCGGACTGTAG+AGG - Chr7:90346926-90346945 MsG0780041387.01.T01:CDS 55.0%
CTCCTCCTTGGTCCATGTCT+AGG + Chr7:90346841-90346860 None:intergenic 55.0%
CTCCTCTCTCTCTCTCTCTG+GGG - Chr7:90350453-90350472 MsG0780041387.01.T01:intron 55.0%
CTCTCCTCTCTCTCTCTCTC+TGG - Chr7:90350451-90350470 MsG0780041387.01.T01:intron 55.0%
GAATCCCCTCACGGTAGCAA+TGG + Chr7:90346435-90346454 None:intergenic 55.0%
GAGAGAGAGAGAGAGGAGAG+GGG + Chr7:90350451-90350470 None:intergenic 55.0%
GAGAGGGAAAATTGGAGCGG+AGG - Chr7:90344623-90344642 MsG0780041387.01.T01:three_prime_UTR 55.0%
GCAATGGAGAAGGAAGGCGA+AGG + Chr7:90350348-90350367 None:intergenic 55.0%
GCGAAAACGGGCACTTTCCA+TGG - Chr7:90347362-90347381 MsG0780041387.01.T01:CDS 55.0%
GCGGAGAGAAGCTAGAGTAG+AGG + Chr7:90348110-90348129 None:intergenic 55.0%
GGATCCTACGGTGAAACACC+AGG - Chr7:90349259-90349278 MsG0780041387.01.T01:intron 55.0%
GGGGTGATATGGGGTGGAAA+TGG + Chr7:90350237-90350256 None:intergenic 55.0%
GTCTCTGTCATGCAGCGTTG+CGG - Chr7:90347101-90347120 MsG0780041387.01.T01:intron 55.0%
TCTCTGTCATGCAGCGTTGC+GGG - Chr7:90347102-90347121 MsG0780041387.01.T01:intron 55.0%
TGAACAGGGGTGATATGGGG+TGG + Chr7:90350243-90350262 None:intergenic 55.0%
TGTGCCTGGTGTTTCACCGT+AGG + Chr7:90349266-90349285 None:intergenic 55.0%
TTGGGGGGTGGGGGAAAATA+AGG + Chr7:90349160-90349179 None:intergenic 55.0%
! AGTAGAAGGGTTTGGGGCTG+GGG + Chr7:90350212-90350231 None:intergenic 55.0%
! ATGTTTGTGGTGGTGCGTGG+TGG - Chr7:90350829-90350848 MsG0780041387.01.T01:CDS 55.0%
! GAAGTAGAAGGGTTTGGGGC+TGG + Chr7:90350214-90350233 None:intergenic 55.0%
! TTTCCGACCTTTGGTGTGCC+TGG + Chr7:90349280-90349299 None:intergenic 55.0%
!! GTGGTGGAAACTGGTCTTGG+TGG - Chr7:90350885-90350904 MsG0780041387.01.T01:CDS 55.0%
!! GTGGTGGTGGAAACTGGTCT+TGG - Chr7:90350882-90350901 MsG0780041387.01.T01:CDS 55.0%
!! TTGGTGGTGGTGGTGGAAAC+TGG - Chr7:90350876-90350895 MsG0780041387.01.T01:CDS 55.0%
CTTGCCAGGGCTGCATCTTC+CGG - Chr7:90347133-90347152 MsG0780041387.01.T01:intron 60.0%
GGGTGGAAGGAAGGTGGTGA+TGG + Chr7:90350299-90350318 None:intergenic 60.0%
GTTACAGAGAGGGCTGTCCC+TGG - Chr7:90348022-90348041 MsG0780041387.01.T01:intron 60.0%
TTGCCAGGGCTGCATCTTCC+GGG - Chr7:90347134-90347153 MsG0780041387.01.T01:intron 60.0%
TGCCAGGGCTGCATCTTCCG+GGG - Chr7:90347135-90347154 MsG0780041387.01.T01:intron 65.0%
GTCCCCGGAAGATGCAGCCC+TGG + Chr7:90347140-90347159 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 90344554 90351768 90344554 ID=MsG0780041387.01;Name=MsG0780041387.01
Chr7 mRNA 90344554 90351768 90344554 ID=MsG0780041387.01.T01;Parent=MsG0780041387.01;Name=MsG0780041387.01.T01;_AED=0.49;_eAED=0.52;_QI=157|0.61|0.78|1|1|1|14|213|450
Chr7 exon 90344554 90344857 90344554 ID=MsG0780041387.01.T01:exon:12373;Parent=MsG0780041387.01.T01
Chr7 exon 90346891 90346976 90346891 ID=MsG0780041387.01.T01:exon:12372;Parent=MsG0780041387.01.T01
Chr7 exon 90347031 90347102 90347031 ID=MsG0780041387.01.T01:exon:12371;Parent=MsG0780041387.01.T01
Chr7 exon 90347328 90347423 90347328 ID=MsG0780041387.01.T01:exon:12370;Parent=MsG0780041387.01.T01
Chr7 exon 90347654 90347764 90347654 ID=MsG0780041387.01.T01:exon:12369;Parent=MsG0780041387.01.T01
Chr7 exon 90348190 90348348 90348190 ID=MsG0780041387.01.T01:exon:12368;Parent=MsG0780041387.01.T01
Chr7 exon 90348563 90348607 90348563 ID=MsG0780041387.01.T01:exon:12367;Parent=MsG0780041387.01.T01
Chr7 exon 90348750 90348797 90348750 ID=MsG0780041387.01.T01:exon:12366;Parent=MsG0780041387.01.T01
Chr7 exon 90348897 90348989 90348897 ID=MsG0780041387.01.T01:exon:12365;Parent=MsG0780041387.01.T01
Chr7 exon 90349139 90349206 90349139 ID=MsG0780041387.01.T01:exon:12364;Parent=MsG0780041387.01.T01
Chr7 exon 90350786 90350999 90350786 ID=MsG0780041387.01.T01:exon:12363;Parent=MsG0780041387.01.T01
Chr7 exon 90351084 90351149 90351084 ID=MsG0780041387.01.T01:exon:12362;Parent=MsG0780041387.01.T01
Chr7 exon 90351306 90351392 90351306 ID=MsG0780041387.01.T01:exon:12361;Parent=MsG0780041387.01.T01
Chr7 exon 90351495 90351768 90351495 ID=MsG0780041387.01.T01:exon:12360;Parent=MsG0780041387.01.T01
Chr7 five_prime_UTR 90351612 90351768 90351612 ID=MsG0780041387.01.T01:five_prime_utr;Parent=MsG0780041387.01.T01
Chr7 CDS 90351495 90351611 90351495 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90351306 90351392 90351306 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90351084 90351149 90351084 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90350786 90350999 90350786 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90349139 90349206 90349139 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90348897 90348989 90348897 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90348750 90348797 90348750 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90348563 90348607 90348563 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90348190 90348348 90348190 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90347654 90347764 90347654 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90347328 90347423 90347328 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90347031 90347102 90347031 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90346891 90346976 90346891 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 CDS 90344767 90344857 90344767 ID=MsG0780041387.01.T01:cds;Parent=MsG0780041387.01.T01
Chr7 three_prime_UTR 90344554 90344766 90344554 ID=MsG0780041387.01.T01:three_prime_utr;Parent=MsG0780041387.01.T01
Gene Sequence

>MsG0780041387.01.T01

ATGGACGCGAAGGATATTCTTGGTTTGCACAAAAACTCATTTCCATCTTCTCTTGATAATAAAAAATCTCGACCTCCCAAAGAATCTCAGAGAAAACCTGATGGCATTTCACGCGAGGTTTATGCACTTACTGGTGGAATGCCACCTCTTATGCCATCAATTGATGCTTCTCAATTGAAGAAAAAGCCTCCTACTCACGAAAAGGTTACTTGGCAATGGCTTCCTTTCACCAATTCTGCTCGTAAAGATGATCTTCATCTTTACCATTGGGTTCGAGTAGTCAATGGTGTTCTACCTACTGGAGACTATTCTTTTGCCAAGTACAACAAGGTAGCTAAATTTGTGTTACTCTCTCTCTTCATGCTTCCTATTCATTGCTATATTTTTGGTTTTACTCACAATCTTCTATTTGATGTGATGCAGTCTGTTGACATCATCAAATACACAGACGAGGAATACGAAAAGTATTTGACAGATCCTGTGGCGTTGCGGGCTATATTACTTGCCAGGGCTGCATCTTCCGGGGACATTGCAACACATCCTATCATTAAGGAACCATATAATGTTTCACAAGAAATGGAGCGAAAACGGGCACTTTCCATGGTCCTCTCCCAAACAAGACAACAAGAGAAAAGAGATGAAGAGGTTCTTATTGAAGCAAAAAGAATAGCCGAGTTACGGATGGCTTCTAAGGGAATGTTTCATAGTATGCCGTGCACATTTTCGTTTGCATGGGAGGTTACTGAACAGTCTCAATTGGCTGTTGCTTCAAATGCTGATGCAGAAGTTACAGAGAGGGCTGTCCCTGGTGAAACTATATCTCCTTCGAATGTGCAACTTCCACAAATGGTTGTACCTTCTGCAGATAATGCCTCTACTCTAGCTTCTCTCCGCATGCTTCGTGTATATTTGAGGACATATGCACTCGAGCAAATGGTGCAAGCTTCAAACTCAACCGCTGGAGTTCGGACTATCAAACGGGTTGAGCAAACATTGCAAGATCTCGGGGTCAATTTGAAACCGAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTTGAATTAAGAAGAGAAATACTAACTTGGCTGAATCTCCAGAAACAGGTGCAATATAAAGAGGCCGAAGGTTCATCGTTCCGTGATGGATCCTACGGTGAAACACCAGGCACACCAAAGGCTCGTGATCTGGAAACTACTGACACATTTGTTTTGTGGTGGGAATCAGGACCGTACATTTATTCCCGATTCGTTGAATTTTGGAGGTGCAATGTGGAAAGGTGTTTCAATTTGTATAATTCCTTTCAAGGTTTCATTGATATCAGTCTTATGGATAGTTATATGGAAGGTTTTTAG

Protein sequence

>MsG0780041387.01.T01

MDAKDILGLHKNSFPSSLDNKKSRPPKESQRKPDGISREVYALTGGMPPLMPSIDASQLKKKPPTHEKVTWQWLPFTNSARKDDLHLYHWVRVVNGVLPTGDYSFAKYNKVAKFVLLSLFMLPIHCYIFGFTHNLLFDVMQSVDIIKYTDEEYEKYLTDPVALRAILLARAASSGDIATHPIIKEPYNVSQEMERKRALSMVLSQTRQQEKRDEEVLIEAKRIAELRMASKGMFHSMPCTFSFAWEVTEQSQLAVASNADAEVTERAVPGETISPSNVQLPQMVVPSADNASTLASLRMLRVYLRTYALEQMVQASNSTAGVRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRREILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKARDLETTDTFVLWWESGPYIYSRFVEFWRCNVERCFNLYNSFQGFIDISLMDSYMEGF*