AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017795.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017795.01.T01 MTR_3g112180 96.732 459 10 1 1 454 1 459 0.0 915
MsG0380017795.01.T01 MTR_3g071320 37.269 432 244 11 20 434 13 434 3.26e-86 271
MsG0380017795.01.T01 MTR_8g096530 32.735 446 271 13 18 449 13 443 1.20e-65 218
MsG0380017795.01.T01 MTR_1g053315 35.000 440 245 17 19 428 25 453 3.39e-63 212
MsG0380017795.01.T01 MTR_7g027175 32.634 429 258 13 20 433 24 436 1.41e-60 204
MsG0380017795.01.T01 MTR_5g076700 31.841 402 243 14 14 399 13 399 3.21e-59 201
MsG0380017795.01.T01 MTR_3g098980 32.009 428 262 13 15 429 18 429 4.50e-58 197
MsG0380017795.01.T01 MTR_1g040175 34.536 388 226 12 20 393 17 390 1.58e-57 196
MsG0380017795.01.T01 MTR_7g114490 32.908 392 236 11 20 397 18 396 3.54e-57 197
MsG0380017795.01.T01 MTR_7g114560 33.249 394 235 13 14 393 13 392 1.68e-55 191
MsG0380017795.01.T01 MTR_7g114550 34.264 394 231 14 14 393 13 392 1.69e-55 191
MsG0380017795.01.T01 MTR_7g114520 32.843 408 246 14 1 393 1 395 5.13e-55 190
MsG0380017795.01.T01 MTR_7g114470 31.043 393 244 11 22 399 21 401 1.63e-54 189
MsG0380017795.01.T01 MTR_1g040215 32.990 388 234 11 20 394 17 391 5.35e-54 187
MsG0380017795.01.T01 MTR_1g046770 48.815 211 82 6 233 438 5 194 1.41e-53 178
MsG0380017795.01.T01 MTR_1g040195 31.865 386 228 10 22 402 19 374 2.59e-48 171
MsG0380017795.01.T01 MTR_1g081660 31.008 387 241 12 20 393 26 399 9.77e-48 170
MsG0380017795.01.T01 MTR_4g055170 26.638 473 287 15 1 433 1 453 8.55e-44 160
MsG0380017795.01.T01 MTR_1g040320 29.688 384 216 10 20 394 17 355 1.31e-42 156
MsG0380017795.01.T01 MTR_7g084940 29.638 442 251 17 20 429 24 437 1.73e-41 153
MsG0380017795.01.T01 MTR_4g007540 28.732 355 213 12 61 394 56 391 9.13e-37 140
MsG0380017795.01.T01 MTR_2g064495 25.747 435 283 15 18 429 9 426 3.12e-36 139
MsG0380017795.01.T01 MTR_1g040315 27.211 441 259 12 14 442 12 402 8.38e-36 137
MsG0380017795.01.T01 MTR_2g105330 25.057 435 282 15 20 429 11 426 3.77e-35 135
MsG0380017795.01.T01 MTR_7g056087 26.622 447 277 12 20 435 12 438 1.07e-34 134
MsG0380017795.01.T01 MTR_8g075610 27.179 390 241 16 61 429 47 414 2.96e-34 133
MsG0380017795.01.T01 MTR_3g049150 27.139 409 250 13 19 393 9 403 4.47e-34 133
MsG0380017795.01.T01 MTR_7g084910 28.125 448 246 18 7 421 12 416 2.46e-33 130
MsG0380017795.01.T01 MTR_2g015430 27.907 430 270 15 29 433 21 435 3.29e-32 127
MsG0380017795.01.T01 MTR_3g465980 25.120 418 254 13 20 401 18 412 1.49e-31 126
MsG0380017795.01.T01 MTR_3g026950 25.547 411 258 13 19 393 9 407 1.75e-30 123
MsG0380017795.01.T01 MTR_4g013050 25.377 398 234 9 19 394 11 367 1.77e-30 122
MsG0380017795.01.T01 MTR_3g465990 23.798 416 262 11 20 401 18 412 2.44e-30 122
MsG0380017795.01.T01 MTR_4g127650 29.017 417 221 15 61 432 66 452 2.70e-30 122
MsG0380017795.01.T01 MTR_6g053810 25.427 468 279 17 15 433 14 460 5.84e-30 121
MsG0380017795.01.T01 MTR_7g085990 29.400 483 250 20 15 434 5 459 9.59e-30 121
MsG0380017795.01.T01 MTR_3g465930 25.054 463 269 16 20 429 18 455 4.06e-29 119
MsG0380017795.01.T01 MTR_7g085930 28.025 471 258 17 15 429 9 454 6.40e-29 119
MsG0380017795.01.T01 MTR_3g465910 25.107 466 262 17 20 429 18 452 1.52e-28 118
MsG0380017795.01.T01 MTR_7g110610 26.753 385 222 12 20 399 13 342 2.34e-27 113
MsG0380017795.01.T01 MTR_4g097090 27.701 361 219 11 61 393 65 411 7.90e-27 112
MsG0380017795.01.T01 MTR_3g101930 26.648 349 230 9 58 390 67 405 2.45e-24 105
MsG0380017795.01.T01 MTR_3g465880 24.823 423 265 12 20 403 18 426 2.62e-24 105
MsG0380017795.01.T01 MTR_3g101960 28.161 348 222 12 58 390 65 399 1.59e-23 103
MsG0380017795.01.T01 MTR_0042s0190 30.769 234 148 9 166 393 1 226 4.69e-23 99.4
MsG0380017795.01.T01 MTR_7g114510 29.365 252 164 9 149 393 9 253 9.67e-23 99.0
MsG0380017795.01.T01 MTR_7g114500 35.616 146 81 4 14 152 13 152 4.16e-22 92.8
MsG0380017795.01.T01 MTR_0502s0010 29.317 249 157 8 102 341 1 239 5.20e-22 95.1
MsG0380017795.01.T01 MTR_7g086000 26.593 455 255 19 19 420 11 439 9.25e-22 97.8
MsG0380017795.01.T01 MTR_1g033350 51.613 93 39 2 357 449 66 152 1.79e-21 91.7
MsG0380017795.01.T01 MTR_3g101970 26.817 399 232 14 22 390 18 386 1.15e-20 94.4
MsG0380017795.01.T01 MTR_3g102020 26.329 414 244 16 11 390 14 400 1.08e-19 91.7
MsG0380017795.01.T01 MTR_8g079970 23.556 450 275 14 19 433 10 425 3.05e-19 90.1
MsG0380017795.01.T01 MTR_8g079980 23.649 444 271 15 20 429 11 420 4.54e-19 89.7
MsG0380017795.01.T01 MTR_3g101900 25.765 392 247 14 24 388 21 395 6.32e-19 89.4
MsG0380017795.01.T01 MTR_8g041770 26.615 387 248 14 22 388 19 389 1.34e-18 88.2
MsG0380017795.01.T01 MTR_3g102010 27.387 398 244 15 22 390 19 400 1.81e-18 87.8
MsG0380017795.01.T01 MTR_0190s0020 25.193 389 239 14 29 388 25 390 5.05e-18 86.7
MsG0380017795.01.T01 MTR_0042s0190 32.927 164 101 6 236 393 1 161 1.89e-17 81.6
MsG0380017795.01.T01 MTR_4g022825 24.812 399 253 16 55 426 49 427 2.80e-17 84.3
MsG0380017795.01.T01 MTR_3g051790 36.170 141 77 4 14 147 16 150 6.37e-17 79.0
MsG0380017795.01.T01 MTR_4g022290 25.416 421 260 21 38 426 34 432 2.64e-16 81.3
MsG0380017795.01.T01 MTR_3g450710 23.706 367 223 10 61 390 65 411 2.72e-16 81.3
MsG0380017795.01.T01 MTR_7g114420 26.695 236 142 7 166 399 1 207 3.19e-16 79.0
MsG0380017795.01.T01 MTR_1g094790 23.934 422 247 15 19 398 10 399 4.58e-16 80.5
MsG0380017795.01.T01 MTR_5g090880 23.577 369 218 12 61 388 67 412 6.74e-16 80.1
MsG0380017795.01.T01 MTR_4g022670 24.202 376 260 12 55 412 49 417 7.17e-16 79.7
MsG0380017795.01.T01 MTR_3g450690 23.836 365 222 10 61 390 72 415 7.67e-16 80.1
MsG0380017795.01.T01 MTR_4g094835 25.705 319 190 12 33 326 32 328 1.03e-15 79.3
MsG0380017795.01.T01 MTR_4g094828 24.802 379 247 13 38 390 33 399 2.51e-15 78.2
MsG0380017795.01.T01 MTR_0042s0230 34.815 135 76 3 20 147 17 146 4.00e-15 73.2
MsG0380017795.01.T01 MTR_8g467580 24.390 410 243 16 17 390 8 386 9.72e-15 76.3
MsG0380017795.01.T01 MTR_8g039950 37.391 115 60 3 14 122 12 120 1.80e-14 70.5
MsG0380017795.01.T01 MTR_5g090830 22.488 418 250 15 20 388 18 410 2.81e-14 75.1
MsG0380017795.01.T01 MTR_3g088420 24.942 433 268 19 29 426 10 420 3.07e-14 74.7
MsG0380017795.01.T01 MTR_5g090810 22.010 418 252 15 20 388 18 410 5.95e-14 73.9
MsG0380017795.01.T01 MTR_3g465870 25.000 304 164 12 15 282 15 290 2.24e-13 72.0
MsG0380017795.01.T01 MTR_8g079950 22.026 454 271 17 19 430 10 422 3.02e-13 72.0
MsG0380017795.01.T01 MTR_3g035000 28.272 191 106 6 207 394 48 210 9.44e-13 69.3
MsG0380017795.01.T01 MTR_5g084850 21.896 443 278 14 19 430 10 415 1.57e-12 69.7
MsG0380017795.01.T01 MTR_1g046760 47.887 71 29 2 77 147 2 64 2.23e-12 62.8
MsG0380017795.01.T01 MTR_3g049140 29.252 147 88 4 262 393 55 200 7.47e-12 65.9
MsG0380017795.01.T01 MTR_7g026860 25.407 307 206 12 55 347 49 346 1.32e-11 66.6
MsG0380017795.01.T01 MTR_3g026310 22.111 398 275 12 54 426 48 435 7.14e-11 64.3
MsG0380017795.01.T01 MTR_4g094832 24.138 319 191 13 96 388 85 378 8.96e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017795.01.T01 AT1G27620 60.899 445 160 7 6 445 3 438 0.0 546
MsG0380017795.01.T01 AT2G40230 40.984 427 225 13 18 429 11 425 5.90e-92 285
MsG0380017795.01.T01 AT5G41040 33.099 426 254 12 20 429 25 435 3.08e-67 221
MsG0380017795.01.T01 AT5G41040 33.099 426 254 12 20 429 41 451 4.61e-67 221
MsG0380017795.01.T01 AT5G63560 33.108 444 265 16 1 432 1 424 3.11e-64 213
MsG0380017795.01.T01 AT3G48720 32.710 428 259 13 20 433 17 429 4.63e-63 210
MsG0380017795.01.T01 AT1G03390 33.484 442 255 15 11 428 25 451 2.20e-61 207
MsG0380017795.01.T01 AT3G03480 33.676 389 228 12 20 393 27 400 2.27e-52 183
MsG0380017795.01.T01 AT5G07080 30.735 449 256 17 17 432 19 445 2.65e-46 166
MsG0380017795.01.T01 AT5G17540 30.711 394 246 13 20 399 17 397 9.36e-45 162
MsG0380017795.01.T01 AT1G65450 28.864 440 271 15 20 435 27 448 1.87e-39 148
MsG0380017795.01.T01 AT1G28680 28.864 440 259 18 29 434 23 442 6.53e-38 144
MsG0380017795.01.T01 AT5G48930 28.358 402 244 15 18 394 9 391 8.63e-38 143
MsG0380017795.01.T01 AT3G47170 28.477 453 268 19 20 429 20 459 4.16e-35 136
MsG0380017795.01.T01 AT2G25150 27.805 410 249 14 15 396 16 406 5.17e-34 133
MsG0380017795.01.T01 AT1G28680 30.571 350 202 13 29 357 23 352 1.88e-33 130
MsG0380017795.01.T01 AT2G23510 25.951 447 279 18 20 433 21 448 1.11e-31 126
MsG0380017795.01.T01 AT3G62160 27.877 391 230 15 26 395 19 378 1.95e-31 125
MsG0380017795.01.T01 AT4G31910 28.467 411 231 16 28 395 27 417 2.24e-31 125
MsG0380017795.01.T01 AT5G57840 28.747 407 235 14 18 391 9 393 5.88e-29 118
MsG0380017795.01.T01 AT2G19070 26.942 412 259 11 19 398 11 412 3.66e-27 113
MsG0380017795.01.T01 AT1G24430 24.932 365 221 13 48 390 43 376 1.09e-21 97.4
MsG0380017795.01.T01 AT1G31490 23.855 415 273 14 5 399 1 392 1.71e-21 97.1
MsG0380017795.01.T01 AT1G65450 27.740 292 183 10 161 435 4 284 9.38e-20 89.7
MsG0380017795.01.T01 AT3G26040 27.340 406 230 19 20 393 11 383 9.26e-19 88.6
MsG0380017795.01.T01 AT3G50280 23.967 363 237 12 58 397 56 402 1.86e-17 84.7
MsG0380017795.01.T01 AT3G50300 24.507 355 239 11 58 394 56 399 5.13e-16 80.5
MsG0380017795.01.T01 AT1G32910 22.727 352 227 10 61 387 65 396 2.03e-14 75.5
MsG0380017795.01.T01 AT5G16410 22.986 422 275 14 9 405 42 438 2.40e-14 75.5
MsG0380017795.01.T01 AT4G15400 24.009 429 282 14 20 428 13 417 2.51e-14 75.1
MsG0380017795.01.T01 AT5G47980 23.725 451 264 21 20 428 13 425 3.98e-14 74.7
MsG0380017795.01.T01 AT5G07860 24.571 350 227 10 58 390 69 398 5.12e-14 74.3
MsG0380017795.01.T01 AT5G23940 24.745 392 236 16 32 388 32 399 2.23e-13 72.4
MsG0380017795.01.T01 AT5G47950 26.128 421 261 17 20 422 14 402 5.59e-13 70.9
MsG0380017795.01.T01 AT4G15390 23.556 450 268 19 20 429 16 429 1.06e-12 70.1
MsG0380017795.01.T01 AT4G15390 23.556 450 268 19 20 429 16 429 1.06e-12 70.1
MsG0380017795.01.T01 AT5G07870 25.000 356 230 12 58 390 69 410 2.71e-12 68.9

Find 121 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAAGAAATCTGTGAATT+TGG 0.123426 3:-100737624 MsG0380017795.01.T01:CDS
GAGAAGTTGTTCCTCTAATT+TGG 0.178049 3:-100737540 MsG0380017795.01.T01:CDS
GGGTTAGAAGAAGTGGATTT+TGG 0.221276 3:-100735201 MsG0380017795.01.T01:CDS
TAGAAAATCTAAGGAACTTT+TGG 0.259804 3:+100737663 None:intergenic
TACGGAAATGGGTTTCTATT+AGG 0.271803 3:-100735411 MsG0380017795.01.T01:CDS
TGTTCCTCCTCTTATAGTTC+AGG 0.300219 3:-100737357 MsG0380017795.01.T01:intron
CTTCTCATCATCCAAATTAG+AGG 0.302954 3:+100737529 None:intergenic
CAGCACACACGTGGCGCTCT+TGG 0.313336 3:-100735530 MsG0380017795.01.T01:CDS
GAAGGGTGGGATGGTCAAAT+TGG 0.315909 3:+100735770 None:intergenic
CCAAAAGGATATTACGGAAA+TGG 0.326610 3:-100735423 MsG0380017795.01.T01:CDS
GAAAAGGAATAATAAATAGA+AGG 0.333029 3:+100737883 None:intergenic
CCATTTCCGTAATATCCTTT+TGG 0.339936 3:+100735423 None:intergenic
GACTTGTTTGGCAACTTAGA+AGG 0.352852 3:+100737425 None:intergenic
TTGAGGAGGTTTACGGTGGG+AGG 0.366578 3:+100735717 None:intergenic
TGTTTCTGTGCCGGAGAGTA+TGG 0.367190 3:-100735082 MsG0380017795.01.T01:CDS
CAATAAACATCACTTGTTAA+AGG 0.368631 3:+100735153 None:intergenic
ATGGAGGAAGTTCACGTATA+AGG 0.368815 3:-100737402 MsG0380017795.01.T01:CDS
AACTTCCTCCATGACTTGTT+TGG 0.373591 3:+100737413 None:intergenic
CAAAAGGATATTACGGAAAT+GGG 0.379938 3:-100735422 MsG0380017795.01.T01:CDS
TAGATCAACGGTTGATTTGT+TGG 0.381332 3:-100735286 MsG0380017795.01.T01:CDS
GATAAATGATGTGGGTACTA+AGG 0.386715 3:+100735629 None:intergenic
AATACTTGATAGAAAATCTA+AGG 0.388268 3:+100737654 None:intergenic
TCCGGGATTGAGGAGGTTTA+CGG 0.395349 3:+100735710 None:intergenic
GTGGATTATTACCCTTTAGC+TGG 0.396936 3:-100737569 MsG0380017795.01.T01:CDS
GAAAGATAGAGAGAATGTTT+TGG 0.402909 3:+100737698 None:intergenic
ATGTGCTGAAAGTACTATAA+AGG 0.412537 3:-100735388 MsG0380017795.01.T01:CDS
AATATTATATGAAGGAAAGC+TGG 0.413734 3:-100735047 MsG0380017795.01.T01:CDS
TGGTTGTGTTCTAGTGTATC+CGG 0.415133 3:+100735692 None:intergenic
AATCTAACCTGAACTATAAG+AGG 0.429697 3:+100737350 None:intergenic
TGGCATGGATAGATACAATC+AGG 0.442037 3:+100737755 None:intergenic
AACCTACCAAAAGGATATTA+CGG 0.444592 3:-100735429 MsG0380017795.01.T01:CDS
TTCTCAACCTCCCAGCTAAA+GGG 0.444946 3:+100737558 None:intergenic
GATTAATATGTCAAAATCAA+TGG 0.449100 3:-100737783 MsG0380017795.01.T01:exon
CACTGCCTATGCGATGGTAT+TGG 0.456285 3:-100735843 MsG0380017795.01.T01:CDS
CTTCTCAACCTCCCAGCTAA+AGG 0.460405 3:+100737557 None:intergenic
TGGTGTGAAGTTAGTGCAAA+AGG 0.463118 3:-100735340 MsG0380017795.01.T01:CDS
AGGAGGTTTACTTGAGGTGT+TGG 0.472780 3:+100735672 None:intergenic
GGAGGATAAAACAGTTAAAA+CGG 0.476159 3:-100735265 MsG0380017795.01.T01:CDS
ATATCACAATGGTCTAAACT+AGG 0.478852 3:-100735222 MsG0380017795.01.T01:CDS
CAACACGTGGCGCCAGTGGA+AGG 0.482449 3:+100735752 None:intergenic
AACGGATGTATCAACTAGCT+TGG 0.489906 3:-100735247 MsG0380017795.01.T01:CDS
AGAGGGAAAAGCGTTACATA+TGG 0.490162 3:-100735178 MsG0380017795.01.T01:CDS
TTAACATCACCACCAATAAC+CGG 0.498881 3:+100735120 None:intergenic
TGGATTATTACCCTTTAGCT+GGG 0.503442 3:-100737568 MsG0380017795.01.T01:CDS
ATAAATGATGTGGGTACTAA+GGG 0.504433 3:+100735630 None:intergenic
TGACCATCCCACCCTTCCAC+TGG 0.507852 3:-100735764 MsG0380017795.01.T01:CDS
AAAAGGAATAATAAATAGAA+GGG 0.509439 3:+100737884 None:intergenic
CATCTCAATTTCTACACGCA+TGG 0.510485 3:-100735818 MsG0380017795.01.T01:CDS
TAAACTAGGGTTAGAAGAAG+TGG 0.516406 3:-100735208 MsG0380017795.01.T01:CDS
GGTTGTGTTCTAGTGTATCC+GGG 0.519394 3:+100735693 None:intergenic
GGGATGGTCAAATTGGTTTG+AGG 0.519810 3:+100735777 None:intergenic
ACCGTAAACCTCCTCAATCC+CGG 0.520816 3:-100735711 MsG0380017795.01.T01:CDS
CACATTGTTTCTTTAAGTAG+AGG 0.520927 3:+100735589 None:intergenic
GCGCCAGTGGAAGGGTGGGA+TGG 0.521056 3:+100735761 None:intergenic
GTGTACTACCTTTGAAGTAG+TGG 0.530567 3:-100735553 MsG0380017795.01.T01:CDS
ACCATAATGAACCTACCAAA+AGG 0.531475 3:-100735438 MsG0380017795.01.T01:CDS
GAGGGAAAAGCGTTACATAT+GGG 0.538877 3:-100735177 MsG0380017795.01.T01:CDS
GGGATTAAAGATAAATGATG+TGG 0.540026 3:+100735620 None:intergenic
GTAGAGAATAATTTGCATCA+TGG 0.541440 3:-100735360 MsG0380017795.01.T01:CDS
TTCTAGTGTATCCGGGATTG+AGG 0.541894 3:+100735700 None:intergenic
TGAGGAGGTTTACGGTGGGA+GGG 0.541978 3:+100735718 None:intergenic
GTTTCAACACGTGGCGCCAG+TGG 0.545214 3:+100735748 None:intergenic
ATCTCAATTTCTACACGCAT+GGG 0.545830 3:-100735817 MsG0380017795.01.T01:CDS
TTTGGCGTTGGAACACTTGG+TGG 0.550642 3:+100737716 None:intergenic
TGATGTTAATGCTGTGAGAA+TGG 0.552220 3:-100735106 MsG0380017795.01.T01:CDS
ACGTGGCGCCAGTGGAAGGG+TGG 0.552419 3:+100735756 None:intergenic
TGAAAGTACTATAAAGGACT+TGG 0.553557 3:-100735382 MsG0380017795.01.T01:CDS
AACACGTGGCGCCAGTGGAA+GGG 0.554156 3:+100735753 None:intergenic
AGAAGGTGCTTTGTTTGTTG+AGG 0.554854 3:-100737483 MsG0380017795.01.T01:CDS
AGCTTCACAATTAGAGTGGA+GGG 0.555024 3:+100735483 None:intergenic
ATCAACGGTTGATTTGTTGG+AGG 0.555071 3:-100735283 MsG0380017795.01.T01:CDS
ATTACAAAGACATAGCCAAA+AGG 0.556217 3:+100734914 None:intergenic
CAATACCATCGCATAGGCAG+TGG 0.556264 3:+100735844 None:intergenic
GAGAATGGTTGTTTCTGTGC+CGG 0.559851 3:-100735091 MsG0380017795.01.T01:CDS
CTAAGTTGCCAAACAAGTCA+TGG 0.563138 3:-100737421 MsG0380017795.01.T01:CDS
TTTACGGTGGGAGGGTATCG+TGG 0.568758 3:+100735726 None:intergenic
CTTGGTGGAATACTAGTGAT+TGG 0.571451 3:+100737731 None:intergenic
GTTTCTTTAAGTAGAGGACA+TGG 0.574489 3:+100735595 None:intergenic
GTGGAATACTAGTGATTGGT+TGG 0.575002 3:+100737735 None:intergenic
ATATTATATGAAGGAAAGCT+GGG 0.576970 3:-100735046 MsG0380017795.01.T01:CDS
ATATGAAGGAAAGCTGGGAA+AGG 0.580265 3:-100735041 MsG0380017795.01.T01:CDS
GTGATTGTATTAACTTGAGG+AGG 0.582827 3:+100735655 None:intergenic
AAGTAGCTTCACAATTAGAG+TGG 0.583672 3:+100735479 None:intergenic
AAGGTAGTACACTTAAGTGA+AGG 0.583790 3:+100735564 None:intergenic
GGATTAAAGATAAATGATGT+GGG 0.585664 3:+100735621 None:intergenic
GGGATTGAGGAGGTTTACGG+TGG 0.587622 3:+100735713 None:intergenic
GTGTGCTGCCACTACTTCAA+AGG 0.591399 3:+100735545 None:intergenic
ATTATTACCCTTTAGCTGGG+AGG 0.596397 3:-100737565 MsG0380017795.01.T01:CDS
AAGCTTGAAGTGGATTGCAA+TGG 0.596995 3:-100737506 MsG0380017795.01.T01:CDS
CGTGGCGCCAGTGGAAGGGT+GGG 0.597722 3:+100735757 None:intergenic
GTTGTGATTGTATTAACTTG+AGG 0.598143 3:+100735652 None:intergenic
ATACTAGTGATTGGTTGGCA+TGG 0.599964 3:+100737740 None:intergenic
AGGTAGTACACTTAAGTGAA+GGG 0.600077 3:+100735565 None:intergenic
TAGTGTATCCGGGATTGAGG+AGG 0.602278 3:+100735703 None:intergenic
TTTAAGTAGAGGACATGGGA+GGG 0.603605 3:+100735600 None:intergenic
TAGCTTCACAATTAGAGTGG+AGG 0.603687 3:+100735482 None:intergenic
CATGTTATACTTATATCATG+AGG 0.603724 3:-100734888 MsG0380017795.01.T01:three_prime_UTR
CTTTAAGTAGAGGACATGGG+AGG 0.603741 3:+100735599 None:intergenic
TATCACAATGGTCTAAACTA+GGG 0.604911 3:-100735221 MsG0380017795.01.T01:CDS
ATCAACCACTGCCTATGCGA+TGG 0.606524 3:-100735849 MsG0380017795.01.T01:CDS
TAAGTCAACGGTTAATGATG+AGG 0.613169 3:-100735316 MsG0380017795.01.T01:CDS
TCAACAAGTCTCCGTTGCGG+AGG 0.615771 3:-100735891 MsG0380017795.01.T01:CDS
TTTCTTTAAGTAGAGGACAT+GGG 0.619926 3:+100735596 None:intergenic
GAGGAAGTTCACGTATAAGG+TGG 0.621910 3:-100737399 MsG0380017795.01.T01:CDS
TGATGAGAAGAAGCTTGAAG+TGG 0.622436 3:-100737516 MsG0380017795.01.T01:CDS
TGAGGAATATATTAGATCAA+CGG 0.624802 3:-100735298 MsG0380017795.01.T01:CDS
TATACTTATATCATGAGGCA+AGG 0.625218 3:-100734883 MsG0380017795.01.T01:three_prime_UTR
ATGTGCCAATACCATCGCAT+AGG 0.627586 3:+100735838 None:intergenic
GCATAGGCAGTGGTTGATTG+CGG 0.629539 3:+100735854 None:intergenic
AACTTGAGGAGGTTTACTTG+AGG 0.644894 3:+100735666 None:intergenic
AAGTAGTGGCAGCACACACG+TGG 0.645012 3:-100735539 MsG0380017795.01.T01:CDS
ATAGAATCATTCCTCCGCAA+CGG 0.651293 3:+100735880 None:intergenic
GAAGTGGATTGCAATGGAGA+AGG 0.655314 3:-100737500 MsG0380017795.01.T01:CDS
AGTGCAAAAGGCTAAGTCAA+CGG 0.658112 3:-100735328 MsG0380017795.01.T01:CDS
CTAACCTGAACTATAAGAGG+AGG 0.663713 3:+100737353 None:intergenic
GGCATGGATAGATACAATCA+GGG 0.667279 3:+100737756 None:intergenic
GGTATCGTGGTTTCAACACG+TGG 0.667414 3:+100735739 None:intergenic
CTAGCTTGGTTATATCACAA+TGG 0.672745 3:-100735233 MsG0380017795.01.T01:CDS
GGATTGAGGAGGTTTACGGT+GGG 0.689398 3:+100735714 None:intergenic
CAGTCAACAAGTCTCCGTTG+CGG 0.710088 3:-100735894 MsG0380017795.01.T01:CDS
AGTTGCCAAACAAGTCATGG+AGG 0.726613 3:-100737418 MsG0380017795.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATATTTTTTTAAATTAA+AGG + Chr3:100736423-100736442 None:intergenic 0.0%
!!! AAATATTTTTTTAAATTAAA+GGG + Chr3:100736422-100736441 None:intergenic 0.0%
!! TTTCAAAAAAAAAAAAAGAA+AGG - Chr3:100736093-100736112 MsG0380017795.01.T01:intron 10.0%
!!! AAATTTTCAATATTATATGA+AGG - Chr3:100737658-100737677 MsG0380017795.01.T01:CDS 10.0%
!!! ATTTTTTTTTTTTTTCCTTT+TGG - Chr3:100737784-100737803 MsG0380017795.01.T01:exon 10.0%
!!! TATTATTTTTAAAGAACTTT+AGG + Chr3:100735484-100735503 None:intergenic 10.0%
!!! TTTAATTTTTTGTTAATCAT+AGG + Chr3:100735820-100735839 None:intergenic 10.0%
!!! TTTACTCTTTTTTTTTTTTT+TGG - Chr3:100735767-100735786 MsG0380017795.01.T01:CDS 10.0%
!! AAAACAAAGACTATTTAATA+AGG - Chr3:100736054-100736073 MsG0380017795.01.T01:intron 15.0%
!! AAAAGGAATAATAAATAGAA+GGG + Chr3:100734832-100734851 None:intergenic 15.0%
!! TAATTCAATGTTGAAATATT+GGG + Chr3:100736173-100736192 None:intergenic 15.0%
!! TATCATTGTTACTAATAATT+AGG + Chr3:100736142-100736161 None:intergenic 15.0%
!! TTAATTCAATGTTGAAATAT+TGG + Chr3:100736174-100736193 None:intergenic 15.0%
!!! GCACTTTTTATATTTTTAAT+AGG + Chr3:100736545-100736564 None:intergenic 15.0%
!! AAGGAAAATAGAAAAAAATG+AGG - Chr3:100737691-100737710 MsG0380017795.01.T01:CDS 20.0%
!! AATACTTGATAGAAAATCTA+AGG + Chr3:100735062-100735081 None:intergenic 20.0%
!! ATAATAATGCTTCAACTAAA+AGG - Chr3:100735498-100735517 MsG0380017795.01.T01:CDS 20.0%
!! ATAATTTCGATTCATTTAAG+CGG - Chr3:100735921-100735940 MsG0380017795.01.T01:intron 20.0%
!! CATTTAATAAGTACAACATT+AGG - Chr3:100736703-100736722 MsG0380017795.01.T01:intron 20.0%
!! GAAAAGGAATAATAAATAGA+AGG + Chr3:100734833-100734852 None:intergenic 20.0%
!! GATTAATATGTCAAAATCAA+TGG - Chr3:100734930-100734949 MsG0380017795.01.T01:three_prime_UTR 20.0%
!! GTATATATGTACATAAGTAT+CGG + Chr3:100736637-100736656 None:intergenic 20.0%
!! TTAGTTTCTTTAATTACATG+CGG + Chr3:100735897-100735916 None:intergenic 20.0%
!! TTATTAGTAACAATGATACT+TGG - Chr3:100736144-100736163 MsG0380017795.01.T01:intron 20.0%
!! TTGAACAACAAAATAATTTG+AGG + Chr3:100736770-100736789 None:intergenic 20.0%
!!! AAAAAAAAAACTAGCGTTTT+TGG + Chr3:100736608-100736627 None:intergenic 20.0%
!!! AAAAAAAAACTAGCGTTTTT+GGG + Chr3:100736607-100736626 None:intergenic 20.0%
!!! ATATAGCAGTTTTAGAAAAA+TGG + Chr3:100737737-100737756 None:intergenic 20.0%
!!! TGTTTATTGCTTATTTTTAC+CGG - Chr3:100737574-100737593 MsG0380017795.01.T01:CDS 20.0%
! AAAATAATTTGAGGACTTGT+TGG + Chr3:100736761-100736780 None:intergenic 25.0%
! AATATTATATGAAGGAAAGC+TGG - Chr3:100737666-100737685 MsG0380017795.01.T01:CDS 25.0%
! AATGACATTACATATGATCA+GGG + Chr3:100735452-100735471 None:intergenic 25.0%
! ATATTATATGAAGGAAAGCT+GGG - Chr3:100737667-100737686 MsG0380017795.01.T01:CDS 25.0%
! CATGTTATACTTATATCATG+AGG - Chr3:100737825-100737844 MsG0380017795.01.T01:five_prime_UTR 25.0%
! GAGAAAATGATGTTATATGT+CGG + Chr3:100736247-100736266 None:intergenic 25.0%
! GGATTAAAGATAAATGATGT+GGG + Chr3:100737095-100737114 None:intergenic 25.0%
! TAGTTTCTTTAATTACATGC+GGG + Chr3:100735896-100735915 None:intergenic 25.0%
! TGAGGAATATATTAGATCAA+CGG - Chr3:100737415-100737434 MsG0380017795.01.T01:CDS 25.0%
! TTGGAATTTGAAGAAAAACA+TGG - Chr3:100736343-100736362 MsG0380017795.01.T01:intron 25.0%
! TTTCAAGAAATCTGTGAATT+TGG - Chr3:100735089-100735108 MsG0380017795.01.T01:CDS 25.0%
!! AGCATGAGAAAATAATGTTT+TGG - Chr3:100736324-100736343 MsG0380017795.01.T01:intron 25.0%
!! CAATAAACATCACTTGTTAA+AGG + Chr3:100737563-100737582 None:intergenic 25.0%
!! TAGAAAATCTAAGGAACTTT+TGG + Chr3:100735053-100735072 None:intergenic 25.0%
!!! AACTTTTTTTGTGTGTTAAC+AGG - Chr3:100735865-100735884 MsG0380017795.01.T01:CDS 25.0%
!!! ACTTTTTTTGTGTGTTAACA+GGG - Chr3:100735866-100735885 MsG0380017795.01.T01:CDS 25.0%
AACATGAGAGGAGTTTATTT+CGG + Chr3:100736298-100736317 None:intergenic 30.0%
AACCTACCAAAAGGATATTA+CGG - Chr3:100737284-100737303 MsG0380017795.01.T01:intron 30.0%
AAGAGAGTCAAAAACAGAAA+AGG + Chr3:100734849-100734868 None:intergenic 30.0%
AATCTAACCTGAACTATAAG+AGG + Chr3:100735366-100735385 None:intergenic 30.0%
ATAAATGATGTGGGTACTAA+GGG + Chr3:100737086-100737105 None:intergenic 30.0%
ATATCACAATGGTCTAAACT+AGG - Chr3:100737491-100737510 MsG0380017795.01.T01:CDS 30.0%
ATGACATTACATATGATCAG+GGG + Chr3:100735451-100735470 None:intergenic 30.0%
ATTACAAAGACATAGCCAAA+AGG + Chr3:100737802-100737821 None:intergenic 30.0%
CAAAAGGATATTACGGAAAT+GGG - Chr3:100737291-100737310 MsG0380017795.01.T01:intron 30.0%
GAATGACATTACATATGATC+AGG + Chr3:100735453-100735472 None:intergenic 30.0%
GGAGGATAAAACAGTTAAAA+CGG - Chr3:100737448-100737467 MsG0380017795.01.T01:CDS 30.0%
GGGATTAAAGATAAATGATG+TGG + Chr3:100737096-100737115 None:intergenic 30.0%
TATACTTATATCATGAGGCA+AGG - Chr3:100737830-100737849 MsG0380017795.01.T01:five_prime_UTR 30.0%
TATCACAATGGTCTAAACTA+GGG - Chr3:100737492-100737511 MsG0380017795.01.T01:CDS 30.0%
TTTCTTTAAGTAGAGGACAT+GGG + Chr3:100737120-100737139 None:intergenic 30.0%
! AAATTTTCAACCATACTCTC+CGG + Chr3:100737644-100737663 None:intergenic 30.0%
! CACATTGTTTCTTTAAGTAG+AGG + Chr3:100737127-100737146 None:intergenic 30.0%
! GAAAGATAGAGAGAATGTTT+TGG + Chr3:100735018-100735037 None:intergenic 30.0%
! GTAGAGAATAATTTGCATCA+TGG - Chr3:100737353-100737372 MsG0380017795.01.T01:intron 30.0%
! GTTGTGATTGTATTAACTTG+AGG + Chr3:100737064-100737083 None:intergenic 30.0%
! TTGTTGTTCAAAGAAACTCA+TGG - Chr3:100736779-100736798 MsG0380017795.01.T01:intron 30.0%
!! ATGTGCTGAAAGTACTATAA+AGG - Chr3:100737325-100737344 MsG0380017795.01.T01:intron 30.0%
!! TATGAGTTTTATGTAGTCAC+TGG - Chr3:100735622-100735641 MsG0380017795.01.T01:CDS 30.0%
!! TGAAAGTACTATAAAGGACT+TGG - Chr3:100737331-100737350 MsG0380017795.01.T01:intron 30.0%
!! TTCTCTATCAAGAGTTTTAG+TGG - Chr3:100735125-100735144 MsG0380017795.01.T01:CDS 30.0%
!!! CAAATTGGTTTGAGGATTTT+TGG + Chr3:100736931-100736950 None:intergenic 30.0%
!!! TGCTTATTTTTACCGGTTAT+TGG - Chr3:100737581-100737600 MsG0380017795.01.T01:CDS 30.0%
!!! TTATTTTTACCGGTTATTGG+TGG - Chr3:100737584-100737603 MsG0380017795.01.T01:CDS 30.0%
!!! TTTTTTGGTGTACATCTACT+AGG - Chr3:100735782-100735801 MsG0380017795.01.T01:CDS 30.0%
AAGGTAGTACACTTAAGTGA+AGG + Chr3:100737152-100737171 None:intergenic 35.0%
AAGTAGCTTCACAATTAGAG+TGG + Chr3:100737237-100737256 None:intergenic 35.0%
ACATGAGAGGAGTTTATTTC+GGG + Chr3:100736297-100736316 None:intergenic 35.0%
ACCATAATGAACCTACCAAA+AGG - Chr3:100737275-100737294 MsG0380017795.01.T01:intron 35.0%
AGGTAGTACACTTAAGTGAA+GGG + Chr3:100737151-100737170 None:intergenic 35.0%
ATCTCAATTTCTACACGCAT+GGG - Chr3:100736896-100736915 MsG0380017795.01.T01:intron 35.0%
CCAAAAGGATATTACGGAAA+TGG - Chr3:100737290-100737309 MsG0380017795.01.T01:intron 35.0%
CTAGCTTGGTTATATCACAA+TGG - Chr3:100737480-100737499 MsG0380017795.01.T01:CDS 35.0%
CTTCTCATCATCCAAATTAG+AGG + Chr3:100735187-100735206 None:intergenic 35.0%
GAGAAGTTGTTCCTCTAATT+TGG - Chr3:100735173-100735192 MsG0380017795.01.T01:CDS 35.0%
GATAAATGATGTGGGTACTA+AGG + Chr3:100737087-100737106 None:intergenic 35.0%
GTTTCTTTAAGTAGAGGACA+TGG + Chr3:100737121-100737140 None:intergenic 35.0%
TAAACTAGGGTTAGAAGAAG+TGG - Chr3:100737505-100737524 MsG0380017795.01.T01:CDS 35.0%
TAAGTCAACGGTTAATGATG+AGG - Chr3:100737397-100737416 MsG0380017795.01.T01:CDS 35.0%
TATTTAATTCCCTTGTCCAG+CGG - Chr3:100735563-100735582 MsG0380017795.01.T01:CDS 35.0%
TGATGTTAATGCTGTGAGAA+TGG - Chr3:100737607-100737626 MsG0380017795.01.T01:CDS 35.0%
TGGATTATTACCCTTTAGCT+GGG - Chr3:100735145-100735164 MsG0380017795.01.T01:CDS 35.0%
TTAACATCACCACCAATAAC+CGG + Chr3:100737596-100737615 None:intergenic 35.0%
! CCATTTCCGTAATATCCTTT+TGG + Chr3:100737293-100737312 None:intergenic 35.0%
! GTGATTGTATTAACTTGAGG+AGG + Chr3:100737061-100737080 None:intergenic 35.0%
! TACGGAAATGGGTTTCTATT+AGG - Chr3:100737302-100737321 MsG0380017795.01.T01:intron 35.0%
! TCCTTTTGGTAGGTTCATTA+TGG + Chr3:100737279-100737298 None:intergenic 35.0%
! TTCCGTAATATCCTTTTGGT+AGG + Chr3:100737289-100737308 None:intergenic 35.0%
!! TAGATCAACGGTTGATTTGT+TGG - Chr3:100737427-100737446 MsG0380017795.01.T01:CDS 35.0%
!!! CATGCTTTTTCTAACATGAG+AGG + Chr3:100736310-100736329 None:intergenic 35.0%
!!! CGTTTTTGGGACATTGATTT+AGG + Chr3:100736594-100736613 None:intergenic 35.0%
AACGGATGTATCAACTAGCT+TGG - Chr3:100737466-100737485 MsG0380017795.01.T01:CDS 40.0%
AACTTGAGGAGGTTTACTTG+AGG + Chr3:100737050-100737069 None:intergenic 40.0%
AGCTTCACAATTAGAGTGGA+GGG + Chr3:100737233-100737252 None:intergenic 40.0%
AGTGCAAAAGGCTAAGTCAA+CGG - Chr3:100737385-100737404 MsG0380017795.01.T01:CDS 40.0%
ATAGAATCATTCCTCCGCAA+CGG + Chr3:100736836-100736855 None:intergenic 40.0%
ATATGAAGGAAAGCTGGGAA+AGG - Chr3:100737672-100737691 MsG0380017795.01.T01:CDS 40.0%
ATGGAGGAAGTTCACGTATA+AGG - Chr3:100735311-100735330 MsG0380017795.01.T01:CDS 40.0%
ATTATTACCCTTTAGCTGGG+AGG - Chr3:100735148-100735167 MsG0380017795.01.T01:CDS 40.0%
CATCTCAATTTCTACACGCA+TGG - Chr3:100736895-100736914 MsG0380017795.01.T01:intron 40.0%
CTAACCTGAACTATAAGAGG+AGG + Chr3:100735363-100735382 None:intergenic 40.0%
CTAAGTTGCCAAACAAGTCA+TGG - Chr3:100735292-100735311 MsG0380017795.01.T01:CDS 40.0%
CTTGGTGGAATACTAGTGAT+TGG + Chr3:100734985-100735004 None:intergenic 40.0%
GGCATGGATAGATACAATCA+GGG + Chr3:100734960-100734979 None:intergenic 40.0%
GTGGAATACTAGTGATTGGT+TGG + Chr3:100734981-100735000 None:intergenic 40.0%
TAGCTTCACAATTAGAGTGG+AGG + Chr3:100737234-100737253 None:intergenic 40.0%
TGATGAGAAGAAGCTTGAAG+TGG - Chr3:100735197-100735216 MsG0380017795.01.T01:CDS 40.0%
TGGCATGGATAGATACAATC+AGG + Chr3:100734961-100734980 None:intergenic 40.0%
TGGTGTGAAGTTAGTGCAAA+AGG - Chr3:100737373-100737392 MsG0380017795.01.T01:CDS 40.0%
TGGTTGTGTTCTAGTGTATC+CGG + Chr3:100737024-100737043 None:intergenic 40.0%
TGTTCCTCCTCTTATAGTTC+AGG - Chr3:100735356-100735375 MsG0380017795.01.T01:CDS 40.0%
TTTAAGTAGAGGACATGGGA+GGG + Chr3:100737116-100737135 None:intergenic 40.0%
! ATACTAGTGATTGGTTGGCA+TGG + Chr3:100734976-100734995 None:intergenic 40.0%
! GACTTGTTTGGCAACTTAGA+AGG + Chr3:100735291-100735310 None:intergenic 40.0%
! GTGGATTATTACCCTTTAGC+TGG - Chr3:100735144-100735163 MsG0380017795.01.T01:CDS 40.0%
!! AACTTCCTCCATGACTTGTT+TGG + Chr3:100735303-100735322 None:intergenic 40.0%
!! AAGCTTGAAGTGGATTGCAA+TGG - Chr3:100735207-100735226 MsG0380017795.01.T01:CDS 40.0%
!! AGAAGAAGTGGATTTTGGAG+AGG - Chr3:100737517-100737536 MsG0380017795.01.T01:CDS 40.0%
!! AGAAGGTGCTTTGTTTGTTG+AGG - Chr3:100735230-100735249 MsG0380017795.01.T01:CDS 40.0%
!! AGAGGGAAAAGCGTTACATA+TGG - Chr3:100737535-100737554 MsG0380017795.01.T01:CDS 40.0%
!! ATCAACGGTTGATTTGTTGG+AGG - Chr3:100737430-100737449 MsG0380017795.01.T01:CDS 40.0%
!! GAAGAAGTGGATTTTGGAGA+GGG - Chr3:100737518-100737537 MsG0380017795.01.T01:CDS 40.0%
!! GAGGGAAAAGCGTTACATAT+GGG - Chr3:100737536-100737555 MsG0380017795.01.T01:CDS 40.0%
!! GGGTTAGAAGAAGTGGATTT+TGG - Chr3:100737512-100737531 MsG0380017795.01.T01:CDS 40.0%
!! GTGTACTACCTTTGAAGTAG+TGG - Chr3:100737160-100737179 MsG0380017795.01.T01:intron 40.0%
!!! TAGAGAGAATGTTTTGGCGT+TGG + Chr3:100735012-100735031 None:intergenic 40.0%
AATCATTGACCGCTGGACAA+GGG + Chr3:100735575-100735594 None:intergenic 45.0%
AGGAGGTTTACTTGAGGTGT+TGG + Chr3:100737044-100737063 None:intergenic 45.0%
AGTTGCCAAACAAGTCATGG+AGG - Chr3:100735295-100735314 MsG0380017795.01.T01:CDS 45.0%
ATGTGCCAATACCATCGCAT+AGG + Chr3:100736878-100736897 None:intergenic 45.0%
CATCTACTAGGTTACTCGAG+TGG - Chr3:100735794-100735813 MsG0380017795.01.T01:CDS 45.0%
CTTTAAGTAGAGGACATGGG+AGG + Chr3:100737117-100737136 None:intergenic 45.0%
GAGGAAGTTCACGTATAAGG+TGG - Chr3:100735314-100735333 MsG0380017795.01.T01:CDS 45.0%
GGTTGTGTTCTAGTGTATCC+GGG + Chr3:100737023-100737042 None:intergenic 45.0%
TATGTGCAATCATTGACCGC+TGG + Chr3:100735582-100735601 None:intergenic 45.0%
TTCTAGTGTATCCGGGATTG+AGG + Chr3:100737016-100737035 None:intergenic 45.0%
TTCTCAACCTCCCAGCTAAA+GGG + Chr3:100735158-100735177 None:intergenic 45.0%
!! GAAGTGGATTGCAATGGAGA+AGG - Chr3:100735213-100735232 MsG0380017795.01.T01:CDS 45.0%
!! GAGAATGGTTGTTTCTGTGC+CGG - Chr3:100737622-100737641 MsG0380017795.01.T01:CDS 45.0%
!! GGGATGGTCAAATTGGTTTG+AGG + Chr3:100736939-100736958 None:intergenic 45.0%
!!! TGTTTTGGCGTTGGAACACT+TGG + Chr3:100735003-100735022 None:intergenic 45.0%
!!! AATTATTTAATGAATTATTT+TGG - Chr3:100735981-100736000 MsG0380017795.01.T01:intron 5.0%
ACCGTAAACCTCCTCAATCC+CGG - Chr3:100737002-100737021 MsG0380017795.01.T01:intron 50.0%
ATCAACCACTGCCTATGCGA+TGG - Chr3:100736864-100736883 MsG0380017795.01.T01:intron 50.0%
CAATACCATCGCATAGGCAG+TGG + Chr3:100736872-100736891 None:intergenic 50.0%
CAATCATTGACCGCTGGACA+AGG + Chr3:100735576-100735595 None:intergenic 50.0%
CACTGCCTATGCGATGGTAT+TGG - Chr3:100736870-100736889 MsG0380017795.01.T01:intron 50.0%
CAGTCAACAAGTCTCCGTTG+CGG - Chr3:100736819-100736838 MsG0380017795.01.T01:intron 50.0%
CTTCTCAACCTCCCAGCTAA+AGG + Chr3:100735159-100735178 None:intergenic 50.0%
GAAGGGTGGGATGGTCAAAT+TGG + Chr3:100736946-100736965 None:intergenic 50.0%
GCATAGGCAGTGGTTGATTG+CGG + Chr3:100736862-100736881 None:intergenic 50.0%
GGATTGAGGAGGTTTACGGT+GGG + Chr3:100737002-100737021 None:intergenic 50.0%
GGTATCGTGGTTTCAACACG+TGG + Chr3:100736977-100736996 None:intergenic 50.0%
GTGTGCTGCCACTACTTCAA+AGG + Chr3:100737171-100737190 None:intergenic 50.0%
TAGTGTATCCGGGATTGAGG+AGG + Chr3:100737013-100737032 None:intergenic 50.0%
TCCGGGATTGAGGAGGTTTA+CGG + Chr3:100737006-100737025 None:intergenic 50.0%
! TGTTTCTGTGCCGGAGAGTA+TGG - Chr3:100737631-100737650 MsG0380017795.01.T01:CDS 50.0%
! TTTGGCGTTGGAACACTTGG+TGG + Chr3:100735000-100735019 None:intergenic 50.0%
AAGTAGTGGCAGCACACACG+TGG - Chr3:100737174-100737193 MsG0380017795.01.T01:intron 55.0%
GGGATTGAGGAGGTTTACGG+TGG + Chr3:100737003-100737022 None:intergenic 55.0%
TCAACAAGTCTCCGTTGCGG+AGG - Chr3:100736822-100736841 MsG0380017795.01.T01:intron 55.0%
TGAGGAGGTTTACGGTGGGA+GGG + Chr3:100736998-100737017 None:intergenic 55.0%
TTGAGGAGGTTTACGGTGGG+AGG + Chr3:100736999-100737018 None:intergenic 55.0%
!! TTTACGGTGGGAGGGTATCG+TGG + Chr3:100736990-100737009 None:intergenic 55.0%
AACACGTGGCGCCAGTGGAA+GGG + Chr3:100736963-100736982 None:intergenic 60.0%
GTTTCAACACGTGGCGCCAG+TGG + Chr3:100736968-100736987 None:intergenic 60.0%
TGACCATCCCACCCTTCCAC+TGG - Chr3:100736949-100736968 MsG0380017795.01.T01:intron 60.0%
CAACACGTGGCGCCAGTGGA+AGG + Chr3:100736964-100736983 None:intergenic 65.0%
CAGCACACACGTGGCGCTCT+TGG - Chr3:100737183-100737202 MsG0380017795.01.T01:intron 65.0%
ACGTGGCGCCAGTGGAAGGG+TGG + Chr3:100736960-100736979 None:intergenic 70.0%
CGTGGCGCCAGTGGAAGGGT+GGG + Chr3:100736959-100736978 None:intergenic 70.0%
GCGCCAGTGGAAGGGTGGGA+TGG + Chr3:100736955-100736974 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 100734821 100737914 100734821 ID=MsG0380017795.01;Name=MsG0380017795.01
Chr3 mRNA 100734821 100737914 100734821 ID=MsG0380017795.01.T01;Parent=MsG0380017795.01;Name=MsG0380017795.01.T01;_AED=0.25;_eAED=0.25;_QI=116|1|1|1|1|1|2|169|454
Chr3 exon 100734821 100735913 100734821 ID=MsG0380017795.01.T01:exon:27418;Parent=MsG0380017795.01.T01
Chr3 exon 100737358 100737914 100737358 ID=MsG0380017795.01.T01:exon:27417;Parent=MsG0380017795.01.T01
Chr3 five_prime_UTR 100737799 100737914 100737799 ID=MsG0380017795.01.T01:five_prime_utr;Parent=MsG0380017795.01.T01
Chr3 CDS 100737358 100737798 100737358 ID=MsG0380017795.01.T01:cds;Parent=MsG0380017795.01.T01
Chr3 CDS 100734990 100735913 100734990 ID=MsG0380017795.01.T01:cds;Parent=MsG0380017795.01.T01
Chr3 three_prime_UTR 100734821 100734989 100734821 ID=MsG0380017795.01.T01:three_prime_utr;Parent=MsG0380017795.01.T01
Gene Sequence

>MsG0380017795.01.T01

ATGTCAAAATCAATGGAACTCCCTGATTGTATCTATCCATGCCAACCAATCACTAGTATTCCACCAAGTGTTCCAACGCCAAAACATTCTCTCTATCTTTCTAATCTTGATGACCAAAAGTTCCTTAGATTTTCTATCAAGTATTTGTACATTTTCAAGAAATCTGTGAATTTGGATCATTTGAAGTGTTCTCTATCAAGAGTTTTAGTGGATTATTACCCTTTAGCTGGGAGGTTGAGAAGTTGTTCCTCTAATTTGGATGATGAGAAGAAGCTTGAAGTGGATTGCAATGGAGAAGGTGCTTTGTTTGTTGAGGCTTTCATGTCTATAACTGCTGAAGAATTACTTGAACCTTCTAAGTTGCCAAACAAGTCATGGAGGAAGTTCACGTATAAGGTGGAATCTCAAAGTTTCTTAGATGTTCCTCCTCTTATAGTTCAGTCAACAAGTCTCCGTTGCGGAGGAATGATTCTATGCACCGCAATCAACCACTGCCTATGCGATGGTATTGGCACATCTCAATTTCTACACGCATGGGCACAACTAACCAAAAATCCTCAAACCAATTTGACCATCCCACCCTTCCACTGGCGCCACGTGTTGAAACCACGATACCCTCCCACCGTAAACCTCCTCAATCCCGGATACACTAGAACACAACCAACACCTCAAGTAAACCTCCTCAAGTTAATACAATCACAACCCTTAGTACCCACATCATTTATCTTTAATCCCTCCCATGTCCTCTACTTAAAGAAACAATGTGTCCCTTCACTTAAGTGTACTACCTTTGAAGTAGTGGCAGCACACACGTGGCGCTCTTGGATTCGTTCAATGAATTTATCATTACCCTCCACTCTAATTGTGAAGCTACTTTTCTCTATTAACATTCGTACCATAATGAACCTACCAAAAGGATATTACGGAAATGGGTTTCTATTAGGATGTGCTGAAAGTACTATAAAGGACTTGGTAGAGAATAATTTGCATCATGGTGTGAAGTTAGTGCAAAAGGCTAAGTCAACGGTTAATGATGAGGAATATATTAGATCAACGGTTGATTTGTTGGAGGATAAAACAGTTAAAACGGATGTATCAACTAGCTTGGTTATATCACAATGGTCTAAACTAGGGTTAGAAGAAGTGGATTTTGGAGAGGGAAAAGCGTTACATATGGGTCCTTTAACAAGTGATGTTTATTGCTTATTTTTACCGGTTATTGGTGGTGATGTTAATGCTGTGAGAATGGTTGTTTCTGTGCCGGAGAGTATGGTTGAAAATTTTCAATATTATATGAAGGAAAGCTGGGAAAGGAAAATAGAAAAAAATGAGGATCATCATGTGCATGAGAATCCATTTTTCTAA
Protein sequence

>MsG0380017795.01.T01

MSKSMELPDCIYPCQPITSIPPSVPTPKHSLYLSNLDDQKFLRFSIKYLYIFKKSVNLDHLKCSLSRVLVDYYPLAGRLRSCSSNLDDEKKLEVDCNGEGALFVEAFMSITAEELLEPSKLPNKSWRKFTYKVESQSFLDVPPLIVQSTSLRCGGMILCTAINHCLCDGIGTSQFLHAWAQLTKNPQTNLTIPPFHWRHVLKPRYPPTVNLLNPGYTRTQPTPQVNLLKLIQSQPLVPTSFIFNPSHVLYLKKQCVPSLKCTTFEVVAAHTWRSWIRSMNLSLPSTLIVKLLFSINIRTIMNLPKGYYGNGFLLGCAESTIKDLVENNLHHGVKLVQKAKSTVNDEEYIRSTVDLLEDKTVKTDVSTSLVISQWSKLGLEEVDFGEGKALHMGPLTSDVYCLFLPVIGGDVNAVRMVVSVPESMVENFQYYMKESWERKIEKNEDHHVHENPFF*