AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005236.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005236.01.T01 MTR_8g023550 94.836 426 7 1 1 426 1 411 0.0 820
MsG0180005236.01.T01 MTR_1g095660 96.104 385 9 1 48 426 1 385 0.0 751
MsG0180005236.01.T01 MTR_4g094270 53.890 347 149 4 72 411 61 403 6.58e-120 355
MsG0180005236.01.T01 MTR_3g117230 49.375 320 161 1 103 422 77 395 2.96e-112 335
MsG0180005236.01.T01 MTR_3g112260 48.607 323 165 1 100 422 71 392 5.26e-112 335
MsG0180005236.01.T01 MTR_1g083330 52.881 295 136 1 115 409 120 411 2.48e-105 318
MsG0180005236.01.T01 MTR_4g033235 52.881 295 136 1 115 409 121 412 3.85e-105 318
MsG0180005236.01.T01 MTR_1g069105 46.628 341 174 3 85 423 112 446 7.33e-105 318
MsG0180005236.01.T01 MTR_7g099640 46.628 341 174 3 85 423 111 445 1.17e-104 317
MsG0180005236.01.T01 MTR_3g062510 55.253 257 115 0 146 402 140 396 1.61e-103 313
MsG0180005236.01.T01 MTR_7g099640 47.742 310 158 1 85 394 111 416 1.79e-100 306
MsG0180005236.01.T01 MTR_3g062510 61.275 204 79 0 146 349 140 343 5.44e-92 282
MsG0180005236.01.T01 MTR_1g069105 48.315 267 134 1 85 351 112 374 1.93e-86 269
MsG0180005236.01.T01 MTR_7g010800 39.051 274 166 1 146 419 187 459 4.23e-64 218
MsG0180005236.01.T01 MTR_3g115110 43.307 254 143 1 165 418 249 501 2.93e-63 216
MsG0180005236.01.T01 MTR_1g063380 43.568 241 136 0 151 391 464 704 7.32e-62 214
MsG0180005236.01.T01 MTR_1g063380 39.768 259 150 4 164 419 204 459 1.92e-58 205
MsG0180005236.01.T01 MTR_4g094662 41.016 256 150 1 159 414 223 477 1.37e-61 211
MsG0180005236.01.T01 MTR_6g059690 42.642 265 148 3 154 415 186 449 2.36e-61 211
MsG0180005236.01.T01 MTR_2g438140 41.016 256 150 1 159 414 220 474 2.57e-61 211
MsG0180005236.01.T01 MTR_7g101870 42.231 251 145 0 151 401 465 715 6.95e-61 211
MsG0180005236.01.T01 MTR_7g101870 40.756 238 138 2 164 401 205 439 9.10e-58 203
MsG0180005236.01.T01 MTR_2g438140 41.016 256 150 1 159 414 280 534 8.85e-61 209
MsG0180005236.01.T01 MTR_2g095210 43.154 241 137 0 151 391 392 632 7.89e-60 207
MsG0180005236.01.T01 MTR_2g095210 52.222 90 42 1 160 248 201 290 1.23e-21 98.2
MsG0180005236.01.T01 MTR_7g089040 41.053 285 161 3 148 426 668 951 1.93e-59 209
MsG0180005236.01.T01 MTR_7g089040 30.942 223 148 3 170 391 391 608 1.09e-26 113
MsG0180005236.01.T01 MTR_7g088850 40.496 242 144 0 150 391 267 508 2.74e-58 200
MsG0180005236.01.T01 MTR_7g088850 27.426 237 160 5 172 404 24 252 1.22e-19 91.7
MsG0180005236.01.T01 MTR_7g096060 40.892 269 151 4 152 415 227 492 1.37e-57 201
MsG0180005236.01.T01 MTR_7g078570 42.264 265 149 3 154 415 181 444 1.82e-57 199
MsG0180005236.01.T01 MTR_4g064350 41.132 265 152 3 154 415 309 572 1.06e-56 200
MsG0180005236.01.T01 MTR_7g088980 41.322 242 142 0 150 391 121 362 1.43e-56 192
MsG0180005236.01.T01 MTR_0376s0020 41.107 253 146 2 165 415 1 252 6.19e-56 194
MsG0180005236.01.T01 MTR_7g088980 41.322 242 142 0 150 391 203 444 1.66e-55 191
MsG0180005236.01.T01 MTR_7g088980 34.211 152 92 4 244 390 28 176 2.78e-14 75.1
MsG0180005236.01.T01 MTR_5g069780 40.221 271 154 4 153 418 301 568 1.98e-55 196
MsG0180005236.01.T01 MTR_7g088980 41.322 242 142 0 150 391 271 512 6.11e-55 191
MsG0180005236.01.T01 MTR_7g088980 34.513 226 140 4 170 390 22 244 6.34e-30 122
MsG0180005236.01.T01 MTR_7g088980 41.322 242 142 0 150 391 297 538 1.09e-54 191
MsG0180005236.01.T01 MTR_7g088980 30.952 252 140 5 170 390 22 270 6.02e-25 107
MsG0180005236.01.T01 MTR_2g095320 40.741 243 136 4 160 401 147 382 2.16e-54 192
MsG0180005236.01.T01 MTR_2g095320 36.207 290 160 5 115 401 377 644 5.60e-49 177
MsG0180005236.01.T01 MTR_3g462930 40.152 264 150 4 160 418 299 559 6.86e-53 189
MsG0180005236.01.T01 MTR_7g088830 38.028 284 169 3 149 426 642 924 7.10e-53 190
MsG0180005236.01.T01 MTR_7g088830 37.374 198 110 5 204 396 432 620 8.98e-28 116
MsG0180005236.01.T01 MTR_6g016600 36.545 301 175 5 123 412 267 562 6.00e-50 179
MsG0180005236.01.T01 MTR_7g089290 40.254 236 132 6 163 393 637 868 7.14e-50 181
MsG0180005236.01.T01 MTR_7g089290 40.254 236 132 6 163 393 665 896 9.48e-50 181
MsG0180005236.01.T01 MTR_8g099605 36.029 272 165 3 159 422 157 427 4.09e-49 177
MsG0180005236.01.T01 MTR_4g067100 38.976 254 142 5 165 409 380 629 7.71e-49 179
MsG0180005236.01.T01 MTR_4g067100 38.976 254 142 5 165 409 380 629 7.78e-49 179
MsG0180005236.01.T01 MTR_3g104470 39.098 266 154 3 157 418 212 473 1.17e-48 176
MsG0180005236.01.T01 MTR_8g099605 37.500 256 151 3 165 412 404 658 1.23e-48 178
MsG0180005236.01.T01 MTR_1g028390 37.255 255 155 2 161 415 325 574 1.37e-47 174
MsG0180005236.01.T01 MTR_2g101290 37.247 247 154 1 159 405 409 654 5.21e-47 172
MsG0180005236.01.T01 MTR_2g101290 37.903 248 151 3 159 405 409 654 7.76e-47 172
MsG0180005236.01.T01 MTR_3g104480 39.841 251 147 2 168 418 225 471 1.57e-46 171
MsG0180005236.01.T01 MTR_2g078630 39.744 234 126 5 167 391 68 295 2.10e-45 169
MsG0180005236.01.T01 MTR_2g078630 39.744 234 126 5 167 391 596 823 6.37e-45 167
MsG0180005236.01.T01 MTR_2g007010 36.626 243 149 2 150 390 513 752 3.27e-44 165
MsG0180005236.01.T01 MTR_2g007010 38.723 235 124 5 167 391 240 464 3.13e-39 150
MsG0180005236.01.T01 MTR_2g086160 38.618 246 131 9 145 382 112 345 4.06e-43 155
MsG0180005236.01.T01 MTR_3g096000 37.066 259 156 4 156 408 287 544 8.10e-43 160
MsG0180005236.01.T01 MTR_5g075340 36.863 255 157 2 164 418 228 478 1.46e-42 160
MsG0180005236.01.T01 MTR_4g053350 37.860 243 141 7 149 388 111 346 2.94e-42 154
MsG0180005236.01.T01 MTR_3g023900 31.792 346 172 7 97 409 485 799 3.72e-42 159
MsG0180005236.01.T01 MTR_3g023900 32.941 255 157 5 167 409 236 488 6.74e-34 135
MsG0180005236.01.T01 MTR_8g099065 36.522 230 140 3 164 391 533 758 4.26e-42 159
MsG0180005236.01.T01 MTR_3g092070 38.627 233 131 6 164 391 80 305 4.36e-42 151
MsG0180005236.01.T01 MTR_4g053350 37.860 243 141 7 149 388 111 346 4.50e-42 154
MsG0180005236.01.T01 MTR_3g092070 38.627 233 131 6 164 391 80 305 5.08e-42 152
MsG0180005236.01.T01 MTR_2g086160 38.618 246 131 9 145 382 112 345 7.62e-42 153
MsG0180005236.01.T01 MTR_3g092080 37.768 233 133 6 164 391 83 308 3.86e-41 150
MsG0180005236.01.T01 MTR_3g092080 37.768 233 133 6 164 391 83 308 3.94e-41 149
MsG0180005236.01.T01 MTR_4g011810 37.647 255 138 7 151 391 224 471 4.37e-41 153
MsG0180005236.01.T01 MTR_5g009840 35.371 229 142 3 165 391 516 740 1.50e-38 148
MsG0180005236.01.T01 MTR_6g033740 33.101 287 176 6 115 391 443 723 8.70e-38 146
MsG0180005236.01.T01 MTR_1g099470 36.957 230 136 5 165 391 434 657 2.56e-37 144
MsG0180005236.01.T01 MTR_1g088730 35.931 231 139 5 165 391 932 1157 3.09e-37 145
MsG0180005236.01.T01 MTR_3g023890 35.206 267 138 7 150 390 370 627 3.27e-37 144
MsG0180005236.01.T01 MTR_3g023890 33.182 220 125 7 174 381 103 312 2.52e-27 115
MsG0180005236.01.T01 MTR_4g096870 34.025 241 152 5 153 391 107 342 3.76e-37 140
MsG0180005236.01.T01 MTR_1g044600 34.082 267 135 4 152 415 152 380 1.61e-36 140
MsG0180005236.01.T01 MTR_1g101870 36.364 231 139 5 164 391 556 781 2.32e-36 142
MsG0180005236.01.T01 MTR_7g075520 34.000 250 138 7 154 391 201 435 2.43e-36 139
MsG0180005236.01.T01 MTR_3g104490 34.767 279 141 6 144 418 193 434 2.59e-36 141
MsG0180005236.01.T01 MTR_1g101870 36.364 231 139 5 164 391 504 729 2.64e-36 142
MsG0180005236.01.T01 MTR_5g075360 33.209 268 171 3 154 417 51 314 3.16e-36 139
MsG0180005236.01.T01 MTR_1g088750 35.498 231 140 5 165 391 938 1163 3.18e-36 142
MsG0180005236.01.T01 MTR_1g088750 35.498 231 140 5 165 391 889 1114 3.28e-36 142
MsG0180005236.01.T01 MTR_5g075360 34.000 250 161 2 168 417 19 264 5.60e-36 138
MsG0180005236.01.T01 MTR_5g075360 33.209 268 171 3 154 417 227 490 1.17e-35 139
MsG0180005236.01.T01 MTR_5g075360 34.000 250 161 2 168 417 195 440 2.89e-35 138
MsG0180005236.01.T01 MTR_3g089100 34.956 226 138 5 165 386 897 1117 3.64e-35 139
MsG0180005236.01.T01 MTR_3g089100 34.956 226 138 5 165 386 902 1122 3.97e-35 139
MsG0180005236.01.T01 MTR_3g089100 34.956 226 138 5 165 386 931 1151 4.83e-35 138
MsG0180005236.01.T01 MTR_8g469460 33.453 278 136 5 144 417 193 425 4.96e-35 137
MsG0180005236.01.T01 MTR_4g088885 36.255 251 129 6 191 413 249 496 1.10e-34 137
MsG0180005236.01.T01 MTR_8g056860 34.348 230 137 3 188 408 492 716 1.26e-34 137
MsG0180005236.01.T01 MTR_6g023875 32.812 256 150 9 146 391 363 606 2.06e-34 135
MsG0180005236.01.T01 MTR_1g099480 35.111 225 138 5 165 386 468 687 3.52e-34 135
MsG0180005236.01.T01 MTR_7g088980 33.471 242 118 1 150 391 271 469 7.31e-34 133
MsG0180005236.01.T01 MTR_7g088980 34.513 226 140 4 170 390 22 244 2.94e-30 122
MsG0180005236.01.T01 MTR_7g088980 33.471 242 118 1 150 391 297 495 9.34e-34 133
MsG0180005236.01.T01 MTR_7g088980 30.952 252 140 5 170 390 22 270 3.61e-25 108
MsG0180005236.01.T01 MTR_5g074850 35.749 207 129 2 197 402 536 739 4.33e-32 129
MsG0180005236.01.T01 MTR_6g023855 31.557 244 140 8 161 391 242 471 4.04e-31 125
MsG0180005236.01.T01 MTR_8g099065 38.953 172 99 3 164 333 533 700 1.76e-30 124
MsG0180005236.01.T01 MTR_4g112600 64.103 78 27 1 169 245 4 81 2.92e-29 109
MsG0180005236.01.T01 MTR_2g024440 31.034 232 141 6 164 385 213 435 7.65e-29 118
MsG0180005236.01.T01 MTR_2g024440 31.034 232 141 6 164 385 296 518 1.22e-28 118
MsG0180005236.01.T01 MTR_2g024440 31.034 232 141 6 164 385 295 517 1.26e-28 118
MsG0180005236.01.T01 MTR_4g074920 32.743 226 125 7 165 386 669 871 9.32e-28 116
MsG0180005236.01.T01 MTR_1g099480 37.791 172 100 4 165 333 468 635 1.42e-26 112
MsG0180005236.01.T01 MTR_6g023865 28.028 289 158 10 159 409 152 428 3.38e-25 107
MsG0180005236.01.T01 MTR_1g080430 33.508 191 121 6 161 348 673 860 4.75e-21 96.3
MsG0180005236.01.T01 MTR_1g080430 33.508 191 121 6 161 348 673 860 5.51e-21 96.3
MsG0180005236.01.T01 MTR_4g083460 33.889 180 96 5 167 327 839 1014 7.16e-20 92.8
MsG0180005236.01.T01 MTR_8g074160 84.444 45 7 0 141 185 100 144 9.13e-19 83.2
MsG0180005236.01.T01 MTR_8g074130 52.174 92 17 3 311 400 25 91 1.45e-17 77.8
MsG0180005236.01.T01 MTR_6g023845 24.742 291 150 10 146 409 97 345 4.03e-16 79.7
MsG0180005236.01.T01 MTR_8g018640 52.381 84 21 2 317 400 78 142 1.93e-15 73.6
MsG0180005236.01.T01 MTR_6g005760 27.799 259 151 10 105 351 144 378 1.15e-14 76.3
MsG0180005236.01.T01 MTR_6g005760 27.799 259 151 10 105 351 272 506 1.34e-14 76.3
MsG0180005236.01.T01 MTR_4g077880 31.053 190 111 6 175 351 330 512 7.29e-14 73.9
MsG0180005236.01.T01 MTR_5g020530 34.483 145 87 5 201 344 387 524 1.23e-13 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005236.01.T01 AT1G53750 96.244 426 16 0 1 426 1 426 0.0 845
MsG0180005236.01.T01 AT1G53780 87.023 393 50 1 33 425 227 618 0.0 714
MsG0180005236.01.T01 AT1G53780 87.023 393 50 1 33 425 206 597 0.0 713
MsG0180005236.01.T01 AT1G53780 87.023 393 50 1 33 425 206 597 0.0 713
MsG0180005236.01.T01 AT1G53780 87.023 393 50 1 33 425 205 596 0.0 713
MsG0180005236.01.T01 AT5G19990 53.468 346 150 4 73 411 6 347 4.31e-120 354
MsG0180005236.01.T01 AT5G19990 49.612 387 181 6 26 411 32 405 7.52e-120 355
MsG0180005236.01.T01 AT5G19990 49.612 387 181 6 26 411 32 405 7.52e-120 355
MsG0180005236.01.T01 AT5G20000 53.602 347 150 4 72 411 63 405 2.98e-119 354
MsG0180005236.01.T01 AT1G45000 48.297 323 166 1 100 422 71 392 1.47e-112 336
MsG0180005236.01.T01 AT5G43010 48.297 323 166 1 100 422 71 392 2.05e-112 336
MsG0180005236.01.T01 AT4G29040 46.628 341 174 3 85 423 109 443 1.45e-105 320
MsG0180005236.01.T01 AT2G20140 46.628 341 174 3 85 423 109 443 2.02e-105 319
MsG0180005236.01.T01 AT3G05530 52.542 295 137 1 115 409 121 412 1.37e-104 317
MsG0180005236.01.T01 AT1G09100 52.542 295 137 1 115 409 120 411 1.11e-103 314
MsG0180005236.01.T01 AT5G58290 54.864 257 116 0 146 402 133 389 1.67e-103 313
MsG0180005236.01.T01 AT1G45000 47.826 207 108 0 100 306 71 277 1.39e-68 221
MsG0180005236.01.T01 AT5G42270 44.094 254 141 1 165 418 247 499 1.49e-64 220
MsG0180005236.01.T01 AT5G15250 39.777 269 161 1 146 414 202 469 2.18e-63 216
MsG0180005236.01.T01 AT2G30950 39.925 268 160 1 147 414 206 472 7.11e-63 215
MsG0180005236.01.T01 AT2G30950 39.925 268 160 1 147 414 206 472 7.11e-63 215
MsG0180005236.01.T01 AT2G30950 39.925 268 160 1 147 414 206 472 7.11e-63 215
MsG0180005236.01.T01 AT2G30950 39.925 268 160 1 147 414 210 476 7.95e-63 215
MsG0180005236.01.T01 AT1G50250 42.913 254 144 1 165 418 259 511 9.63e-63 215
MsG0180005236.01.T01 AT3G53230 42.629 251 144 0 151 401 464 714 1.58e-61 213
MsG0180005236.01.T01 AT3G53230 42.128 235 132 3 160 393 199 430 3.59e-57 201
MsG0180005236.01.T01 AT1G06430 39.850 266 159 1 149 414 201 465 2.66e-61 211
MsG0180005236.01.T01 AT1G06430 39.850 266 159 1 149 414 201 465 2.66e-61 211
MsG0180005236.01.T01 AT1G06430 39.850 266 159 1 149 414 201 465 2.66e-61 211
MsG0180005236.01.T01 AT5G03340 43.154 241 137 0 151 391 463 703 2.87e-60 210
MsG0180005236.01.T01 AT5G03340 41.532 248 140 4 160 405 198 442 1.90e-58 205
MsG0180005236.01.T01 AT5G15250 36.644 292 161 2 146 414 202 492 1.57e-59 202
MsG0180005236.01.T01 AT3G09840 41.564 243 138 3 164 405 203 442 4.43e-59 206
MsG0180005236.01.T01 AT3G09840 43.254 252 142 1 151 401 463 714 4.56e-59 206
MsG0180005236.01.T01 AT1G07510 41.509 265 151 3 154 415 313 576 1.31e-58 205
MsG0180005236.01.T01 AT3G56690 43.443 244 133 2 149 390 705 945 2.08e-56 201
MsG0180005236.01.T01 AT3G56690 37.220 223 135 3 170 391 387 605 5.93e-41 155
MsG0180005236.01.T01 AT2G29080 41.887 265 151 2 153 415 307 570 4.26e-56 198
MsG0180005236.01.T01 AT3G47060 41.985 262 144 4 165 421 322 580 5.51e-56 198
MsG0180005236.01.T01 AT5G58870 41.603 262 145 4 165 421 326 584 3.50e-55 196
MsG0180005236.01.T01 AT1G05910 40.000 245 136 4 164 401 377 617 8.53e-51 184
MsG0180005236.01.T01 AT3G02450 38.346 266 158 3 160 423 326 587 1.21e-50 181
MsG0180005236.01.T01 AT2G03670 39.506 243 146 1 150 391 268 510 3.85e-50 179
MsG0180005236.01.T01 AT2G03670 31.667 240 157 3 169 402 23 261 1.40e-33 133
MsG0180005236.01.T01 AT1G03000 34.653 303 183 8 102 395 588 884 9.92e-50 181
MsG0180005236.01.T01 AT5G53170 37.255 255 155 2 161 415 355 604 1.14e-48 177
MsG0180005236.01.T01 AT5G53540 40.343 233 127 6 164 391 83 308 4.61e-48 169
MsG0180005236.01.T01 AT2G26140 39.286 252 149 2 167 418 226 473 6.04e-48 174
MsG0180005236.01.T01 AT4G23940 36.364 264 155 3 159 412 421 681 2.35e-47 174
MsG0180005236.01.T01 AT3G16290 37.247 247 154 1 159 405 401 646 8.68e-46 169
MsG0180005236.01.T01 AT3G15120 40.260 231 127 4 167 390 718 944 3.43e-45 168
MsG0180005236.01.T01 AT3G15120 40.260 231 127 4 167 390 728 954 3.67e-45 168
MsG0180005236.01.T01 AT4G27680 39.914 233 128 6 164 391 80 305 6.90e-45 160
MsG0180005236.01.T01 AT5G64580 38.224 259 153 5 156 408 304 561 7.76e-44 164
MsG0180005236.01.T01 AT1G80350 38.843 242 133 5 159 391 230 465 2.15e-41 154
MsG0180005236.01.T01 AT1G50140 32.716 324 182 9 91 386 594 909 4.87e-41 156
MsG0180005236.01.T01 AT1G50140 32.716 324 182 9 91 386 594 909 4.87e-41 156
MsG0180005236.01.T01 AT1G50140 32.716 324 182 9 91 386 616 931 5.86e-41 155
MsG0180005236.01.T01 AT1G50140 32.716 324 182 9 91 386 616 931 5.86e-41 155
MsG0180005236.01.T01 AT1G50140 32.716 324 182 9 91 386 616 931 5.86e-41 155
MsG0180005236.01.T01 AT3G01610 36.546 249 137 3 157 391 222 463 1.42e-40 154
MsG0180005236.01.T01 AT3G01610 37.991 229 137 3 163 390 523 747 2.13e-38 148
MsG0180005236.01.T01 AT3G01610 36.546 249 137 3 157 391 222 463 1.51e-40 154
MsG0180005236.01.T01 AT3G01610 37.991 229 137 3 163 390 523 747 2.13e-38 148
MsG0180005236.01.T01 AT5G08470 36.889 225 139 1 167 391 843 1064 2.78e-40 154
MsG0180005236.01.T01 AT5G08470 36.889 225 139 1 167 391 834 1055 2.80e-40 154
MsG0180005236.01.T01 AT4G28000 35.878 262 149 7 143 391 483 738 2.41e-39 150
MsG0180005236.01.T01 AT1G64110 35.193 233 145 3 161 391 514 742 3.02e-39 150
MsG0180005236.01.T01 AT1G64110 35.193 233 145 3 161 391 514 742 3.02e-39 150
MsG0180005236.01.T01 AT4G28000 36.681 229 138 4 165 391 517 740 3.05e-39 150
MsG0180005236.01.T01 AT1G64110 35.193 233 145 3 161 391 509 737 3.20e-39 150
MsG0180005236.01.T01 AT1G64110 35.193 233 145 3 161 391 512 740 3.28e-39 150
MsG0180005236.01.T01 AT1G64110 35.193 233 145 3 161 391 512 740 3.28e-39 150
MsG0180005236.01.T01 AT4G28000 36.681 229 138 4 165 391 517 740 3.68e-39 150
MsG0180005236.01.T01 AT3G19740 32.716 324 182 9 91 386 606 921 7.61e-39 149
MsG0180005236.01.T01 AT2G34560 32.917 240 157 3 153 391 88 324 1.17e-38 144
MsG0180005236.01.T01 AT2G34560 32.917 240 157 3 153 391 97 333 1.53e-38 144
MsG0180005236.01.T01 AT2G27600 36.100 241 144 7 145 382 109 342 1.72e-38 144
MsG0180005236.01.T01 AT5G52882 34.363 259 153 6 145 391 484 737 1.78e-37 145
MsG0180005236.01.T01 AT4G02480 35.498 231 140 5 165 391 960 1185 4.52e-37 144
MsG0180005236.01.T01 AT2G45500 33.884 242 149 6 154 391 69 303 3.95e-36 136
MsG0180005236.01.T01 AT2G45500 33.884 242 149 6 154 391 69 303 3.95e-36 136
MsG0180005236.01.T01 AT4G24860 35.345 232 141 5 164 391 816 1042 5.72e-36 141
MsG0180005236.01.T01 AT4G24860 35.345 232 141 5 164 391 789 1015 5.82e-36 141
MsG0180005236.01.T01 AT1G02890 33.462 260 161 7 165 419 941 1193 6.19e-36 141
MsG0180005236.01.T01 AT1G79560 35.652 230 134 3 188 408 512 736 6.26e-36 141
MsG0180005236.01.T01 AT4G24860 35.345 232 141 5 164 391 814 1040 6.57e-36 141
MsG0180005236.01.T01 AT4G24860 35.345 232 141 5 164 391 812 1038 6.76e-36 141
MsG0180005236.01.T01 AT1G79560 35.652 230 134 3 188 408 512 736 7.20e-36 140
MsG0180005236.01.T01 AT1G79560 35.652 230 134 3 188 408 512 736 8.24e-36 140
MsG0180005236.01.T01 AT2G45500 33.884 242 149 6 154 391 202 436 2.43e-35 136
MsG0180005236.01.T01 AT2G45500 33.884 242 149 6 154 391 206 440 2.79e-35 136
MsG0180005236.01.T01 AT2G45500 33.884 242 149 6 154 391 212 446 3.49e-35 136
MsG0180005236.01.T01 AT2G03670 31.667 240 157 3 169 402 23 261 3.08e-34 132
MsG0180005236.01.T01 AT2G03670 39.355 155 93 1 150 303 268 422 6.83e-28 115
MsG0180005236.01.T01 AT4G04910 35.223 247 129 6 191 409 239 482 1.56e-33 133
MsG0180005236.01.T01 AT3G27120 30.742 283 170 8 146 409 381 656 1.75e-33 133
MsG0180005236.01.T01 AT4G04180 30.603 232 142 6 164 385 310 532 1.11e-26 112
MsG0180005236.01.T01 AT4G04180 30.603 232 142 6 164 385 315 537 1.23e-26 112
MsG0180005236.01.T01 AT1G62130 30.417 240 134 7 165 397 743 956 3.63e-26 112
MsG0180005236.01.T01 AT1G62130 30.417 240 134 7 165 397 750 963 3.99e-26 112
MsG0180005236.01.T01 AT1G02890 30.000 260 142 8 165 419 941 1165 1.62e-23 104
MsG0180005236.01.T01 AT1G53790 72.603 73 13 1 17 89 9 74 2.26e-23 102
MsG0180005236.01.T01 AT1G53790 72.603 73 13 1 17 89 9 74 2.70e-23 102
MsG0180005236.01.T01 AT1G53790 72.603 73 13 1 17 89 9 74 2.70e-23 102
MsG0180005236.01.T01 AT5G08470 36.486 148 91 1 167 314 843 987 8.51e-22 99.0
MsG0180005236.01.T01 AT3G04340 33.333 204 129 5 150 348 763 964 5.79e-20 93.2
MsG0180005236.01.T01 AT5G16930 32.895 152 94 5 201 351 397 541 2.72e-13 72.4
MsG0180005236.01.T01 AT2G18330 33.793 145 88 5 201 344 384 521 5.58e-13 71.2
MsG0180005236.01.T01 AT3G03060 32.278 158 99 5 195 351 379 529 8.77e-13 70.5

Find 117 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTGTAGACCATATATT+TGG 0.125735 1:+88932015 None:intergenic
CTTCACATTGATAACATATT+TGG 0.151421 1:+88933887 None:intergenic
GATGGTTCGTGAACTGTTTC+AGG 0.169232 1:-88933112 MsG0180005236.01.T01:intron
ATTTCATGGTTGACTCTTAA+AGG 0.180838 1:-88931860 MsG0180005236.01.T01:three_prime_UTR
TTGGATCGTAAAGTTGAATT+TGG 0.208227 1:-88932478 MsG0180005236.01.T01:CDS
AGGAATCTGGATCTGATATT+TGG 0.262951 1:+88933519 None:intergenic
GAGATTTGGCTTATAATATA+AGG 0.285003 1:+88936038 None:intergenic
CCAAAGGGTGTGCTTTGTTA+TGG 0.289972 1:-88933252 MsG0180005236.01.T01:CDS
GCAGCTTCAGATTTGAGATT+TGG 0.298919 1:+88936024 None:intergenic
TAAAACAAATGAGAGTTCTT+TGG 0.299437 1:+88931731 None:intergenic
TGGGAGTTGCACTGAACTTC+TGG 0.300224 1:+88932035 None:intergenic
TATTTGGCATCTTCAGAGTT+TGG 0.307446 1:+88933903 None:intergenic
CTATTTGAATGCATATTTCA+TGG 0.314597 1:-88931874 MsG0180005236.01.T01:three_prime_UTR
ATGTTCTTACCAGTGGAGTT+TGG 0.317080 1:+88932355 None:intergenic
TTTGAGCACGTTATGGTCTC+TGG 0.320861 1:+88931971 None:intergenic
ATCCAGCACTATTGCGGCCT+GGG 0.338212 1:-88932504 MsG0180005236.01.T01:CDS
GATATCCCTTTCACAGTTCA+TGG 0.347039 1:+88932405 None:intergenic
TGATGATTTCAGTTTGTTGT+TGG 0.350814 1:-88933710 MsG0180005236.01.T01:intron
AGGAACTGGCAAAACACTTT+TGG 0.351355 1:-88933223 MsG0180005236.01.T01:CDS
GCAGGAGGAGCAGCCTCTTC+AGG 0.355558 1:-88934042 MsG0180005236.01.T01:intron
TGTTCTTACCAGTGGAGTTT+GGG 0.362266 1:+88932356 None:intergenic
TTCCACTTTACGCAGGGTTT+GGG 0.364518 1:-88934553 MsG0180005236.01.T01:intron
CAGTGCAACTCCCAAATATA+TGG 0.366186 1:-88932026 MsG0180005236.01.T01:CDS
CTCTGTTACAGTCTTCCTTC+GGG 0.367385 1:+88932099 None:intergenic
CCAAGCTTGACAAATTTCTC+TGG 0.370248 1:+88933285 None:intergenic
TCTCTGTTACAGTCTTCCTT+CGG 0.371200 1:+88932098 None:intergenic
TCTCTCTAGGAGCTGATATA+AGG 0.379334 1:-88932159 MsG0180005236.01.T01:intron
AATATTGTTTGAGCACGTTA+TGG 0.384928 1:+88931964 None:intergenic
TTTGATGAAATTGATGCAAT+TGG 0.393532 1:-88932970 MsG0180005236.01.T01:CDS
GATCCAGCACTATTGCGGCC+TGG 0.393592 1:-88932505 MsG0180005236.01.T01:CDS
GATGATTTCAGTTTGTTGTT+GGG 0.401893 1:-88933709 MsG0180005236.01.T01:intron
GGAGAAGGAAATTAAAGATA+TGG 0.402101 1:-88934503 MsG0180005236.01.T01:CDS
CCAGAGAAATTTGTCAAGCT+TGG 0.404730 1:-88933285 MsG0180005236.01.T01:CDS
AAGCAACTTTCACCTTGGTT+TGG 0.410026 1:-88931678 MsG0180005236.01.T01:three_prime_UTR
CGCCCAGGCCGCAATAGTGC+TGG 0.424492 1:+88932502 None:intergenic
TGTTATGGTCCACCAGGAAC+TGG 0.429324 1:-88933237 MsG0180005236.01.T01:CDS
TCAAAGAACCATATGCCCTT+TGG 0.433402 1:+88931918 None:intergenic
GAAATTGTGAATCAGCTTGA+TGG 0.438120 1:-88932889 MsG0180005236.01.T01:CDS
CAATTGTAGACCATATATTT+GGG 0.438846 1:+88932016 None:intergenic
CCATAACAAAGCACACCCTT+TGG 0.448130 1:+88933252 None:intergenic
AAACTATTCCAAAGGGCATA+TGG 0.449729 1:-88931926 MsG0180005236.01.T01:three_prime_UTR
TTTCAGTTTGTTGTTGGGCT+AGG 0.455935 1:-88933704 MsG0180005236.01.T01:intron
ACATCATTATATGTCACATC+TGG 0.470282 1:+88933445 None:intergenic
TAGAGGAAGGAATGCGTGTT+GGG 0.476572 1:-88933658 MsG0180005236.01.T01:intron
ACTATTGCGGCCTGGGCGAT+TGG 0.479348 1:-88932497 MsG0180005236.01.T01:CDS
GGTATCAAGGAGTCTGATAC+TGG 0.483066 1:-88934113 MsG0180005236.01.T01:CDS
ATCTCAAATCTGAAGCTGCT+TGG 0.483287 1:-88936020 MsG0180005236.01.T01:five_prime_UTR
TTTCTCTTCAACTGTCATCA+TGG 0.485919 1:+88933468 None:intergenic
TGTTGTAATAATAGGTATCA+AGG 0.499629 1:-88934126 MsG0180005236.01.T01:intron
TGTGTCCTACTCTCTAGATC+AGG 0.503167 1:+88932451 None:intergenic
ATTCCTTCCTCTATGTCGGT+GGG 0.505296 1:+88933668 None:intergenic
CGGCTTTGCCCAAACTCCAC+TGG 0.507108 1:-88932364 MsG0180005236.01.T01:intron
TTCTGATAAGCAAATGATGC+AGG 0.509435 1:-88934060 MsG0180005236.01.T01:CDS
AGTGCTGGATCCAAAGTGTC+AGG 0.511055 1:+88932517 None:intergenic
TTACAGTCTTCCTTCGGGCA+CGG 0.513244 1:+88932104 None:intergenic
TAATGATGTTGGTGGTTGTA+AGG 0.514610 1:-88933431 MsG0180005236.01.T01:CDS
CGAGAACCATGAACTGTGAA+AGG 0.515979 1:-88932411 MsG0180005236.01.T01:CDS
TCATCCTCATCGAGAGGGCG+AGG 0.521215 1:+88935926 None:intergenic
CTCCGTGAAAACTATTCCAA+AGG 0.521911 1:-88931934 MsG0180005236.01.T01:three_prime_UTR
ATGCAAGGGTCAAAGTGAAA+AGG 0.523168 1:+88931767 None:intergenic
GATGAAATTGATGCAATTGG+AGG 0.529693 1:-88932967 MsG0180005236.01.T01:CDS
GTTCAGAAATATGTTGGTGA+GGG 0.534000 1:-88933141 MsG0180005236.01.T01:CDS
CATTCCTTCCTCTATGTCGG+TGG 0.534424 1:+88933667 None:intergenic
GCAGTGAATAAAGTCATCAA+AGG 0.537155 1:-88932061 MsG0180005236.01.T01:CDS
TCCGTGAAAACTATTCCAAA+GGG 0.540614 1:-88931933 MsG0180005236.01.T01:three_prime_UTR
TTCCTTCCTCTATGTCGGTG+GGG 0.540944 1:+88933669 None:intergenic
GAAACAAGATCCCACTGGCT+TGG 0.541173 1:+88934080 None:intergenic
TCCTTCCTCTATGTCGGTGG+GGG 0.543622 1:+88933670 None:intergenic
AAATTGTGAATCAGCTTGAT+GGG 0.544829 1:-88932888 MsG0180005236.01.T01:CDS
GTGCTTTGTTATGGTCCACC+AGG 0.550033 1:-88933243 MsG0180005236.01.T01:CDS
AGGAGTGTGTGCACTGAAGC+TGG 0.550291 1:-88932139 MsG0180005236.01.T01:CDS
TGTTGTTGGGCTAGGAGACA+AGG 0.552446 1:-88933696 MsG0180005236.01.T01:CDS
TTGAGCACGTTATGGTCTCT+GGG 0.552815 1:+88931972 None:intergenic
AAATTTCTCTGGATGAAGCA+TGG 0.554156 1:+88933296 None:intergenic
GGCAAAGACGATGCAATGCA+AGG 0.556988 1:+88931752 None:intergenic
AATTTCTCTGGATGAAGCAT+GGG 0.557842 1:+88933297 None:intergenic
GTCAAAAGCAACTTTCACCT+TGG 0.563359 1:-88931683 MsG0180005236.01.T01:three_prime_UTR
TGACTTTATTCACTGCATCA+AGG 0.571386 1:+88932068 None:intergenic
GCCGAGCAAGAAGCTCAAAA+CGG 0.571922 1:+88932383 None:intergenic
CAGTGAATAAAGTCATCAAA+GGG 0.573521 1:-88932060 MsG0180005236.01.T01:CDS
CGATTTGACGATGGTGTTGG+TGG 0.576969 1:-88932940 MsG0180005236.01.T01:CDS
CTTGGAATTGATCCTCCAAA+GGG 0.577450 1:-88933267 MsG0180005236.01.T01:CDS
TAACAAAGCACACCCTTTGG+AGG 0.580223 1:+88933255 None:intergenic
GAACTTGTTCAGAAATATGT+TGG 0.580468 1:-88933147 MsG0180005236.01.T01:CDS
ACTGTCATCATGGTAACACT+TGG 0.582359 1:+88933478 None:intergenic
ACTTTACGATCCAATCGCCC+AGG 0.582511 1:+88932487 None:intergenic
ACGCATTCCTTCCTCTATGT+CGG 0.584785 1:+88933664 None:intergenic
TCCTACTCTCTAGATCAGGC+AGG 0.591282 1:+88932455 None:intergenic
GTCTAGCTACACCAAGCCAG+TGG 0.594456 1:-88934091 MsG0180005236.01.T01:CDS
GCACGATTTGACGATGGTGT+TGG 0.598895 1:-88932943 MsG0180005236.01.T01:CDS
ATAGAGGAAGGAATGCGTGT+TGG 0.599136 1:-88933659 MsG0180005236.01.T01:CDS
GCTTGGAATTGATCCTCCAA+AGG 0.599971 1:-88933268 MsG0180005236.01.T01:CDS
GAGAACCATGAACTGTGAAA+GGG 0.600004 1:-88932410 MsG0180005236.01.T01:CDS
CTTTGGATCCAGCACTATTG+CGG 0.600136 1:-88932510 MsG0180005236.01.T01:CDS
TGTTCAGAAATATGTTGGTG+AGG 0.604104 1:-88933142 MsG0180005236.01.T01:CDS
AGTTCTATTAGCAACAGCCC+TGG 0.605396 1:+88933200 None:intergenic
TTCAGAAATATGTTGGTGAG+GGG 0.607694 1:-88933140 MsG0180005236.01.T01:CDS
CTTGATGGGTTTGATGCTCG+AGG 0.608897 1:-88932874 MsG0180005236.01.T01:CDS
CATCCTCATCGAGAGGGCGA+GGG 0.615653 1:+88935927 None:intergenic
TGGTGTTGGTGGTGATAATG+AGG 0.617118 1:-88932929 MsG0180005236.01.T01:CDS
GCACGTTATGGTCTCTGGGA+AGG 0.617813 1:+88931976 None:intergenic
GCAAAGACGATGCAATGCAA+GGG 0.624570 1:+88931753 None:intergenic
TCAGAAATATGTTGGTGAGG+GGG 0.626431 1:-88933139 MsG0180005236.01.T01:CDS
GAACCCTCGCCCTCTCGATG+AGG 0.631323 1:-88935930 MsG0180005236.01.T01:CDS
TATCAGAAACAAGATCCCAC+TGG 0.635585 1:+88934075 None:intergenic
GTGACATATAATGATGTTGG+TGG 0.636496 1:-88933439 MsG0180005236.01.T01:CDS
GATGTGACATATAATGATGT+TGG 0.638506 1:-88933442 MsG0180005236.01.T01:CDS
TGATAAGCAAATGATGCAGG+AGG 0.645808 1:-88934057 MsG0180005236.01.T01:CDS
CAATGTGAAGCAGATTGCAA+AGG 0.648835 1:-88933874 MsG0180005236.01.T01:intron
CGATGTCATCCTCATCGAGA+GGG 0.653218 1:+88935921 None:intergenic
GCCTGCCTGATCTAGAGAGT+AGG 0.658383 1:-88932456 MsG0180005236.01.T01:CDS
TCTAGCTACACCAAGCCAGT+GGG 0.668948 1:-88934090 MsG0180005236.01.T01:CDS
TGTATGCTATCCGTGCCCGA+AGG 0.670697 1:-88932114 MsG0180005236.01.T01:CDS
GCGATGTCATCCTCATCGAG+AGG 0.680286 1:+88935920 None:intergenic
GATTGGACATAACCAAACCA+AGG 0.701057 1:+88931666 None:intergenic
GGAGGTGCACGATTTGACGA+TGG 0.742439 1:-88932949 MsG0180005236.01.T01:CDS
AAGAAAGTGAATGACTTGTG+TGG 0.760698 1:-88934478 MsG0180005236.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTTTTTTTTCTTTTTTTTT+TGG - Chr1:88931937-88931956 MsG0180005236.01.T01:three_prime_UTR 10.0%
!!! AAAGTGCTTTTATTATTTAT+AGG - Chr1:88933765-88933784 MsG0180005236.01.T01:intron 15.0%
!!! TTATCATAAGAGTTATTTTT+TGG + Chr1:88934123-88934142 None:intergenic 15.0%
!! AAAAATGTGAATGTAACATT+AGG + Chr1:88935937-88935956 None:intergenic 20.0%
!! AAAACAAAGCTATATAAAAC+AGG + Chr1:88934671-88934690 None:intergenic 20.0%
!! AATTGAAATAGAACAGAAAT+TGG + Chr1:88931905-88931924 None:intergenic 20.0%
!! ATTGAAATAGAACAGAAATT+GGG + Chr1:88931904-88931923 None:intergenic 20.0%
!! CAAAGTTTGTAATTTCATAT+AGG - Chr1:88932160-88932179 MsG0180005236.01.T01:intron 20.0%
!! CAAATTTATTCTTAAACTGA+AGG - Chr1:88933479-88933498 MsG0180005236.01.T01:CDS 20.0%
!! CTTCAGTTTAAGAATAAATT+TGG + Chr1:88933481-88933500 None:intergenic 20.0%
!! GCAAAATTTACAAAATGTAA+CGG + Chr1:88931990-88932009 None:intergenic 20.0%
!! TAGATAATTGGATATTATGT+AGG - Chr1:88933508-88933527 MsG0180005236.01.T01:CDS 20.0%
!! TTCAATAAATGACCATATTT+AGG + Chr1:88933795-88933814 None:intergenic 20.0%
!! TTTACAAAAAAAATTACGCT+CGG - Chr1:88933996-88934015 MsG0180005236.01.T01:intron 20.0%
!!! TATTTATCTTAGAGTATTCT+TGG + Chr1:88932253-88932272 None:intergenic 20.0%
!!! TTACATCTTTTATTTTCTCT+CGG - Chr1:88933370-88933389 MsG0180005236.01.T01:intron 20.0%
!!! TTTTTAATACTTGTGGAATA+AGG + Chr1:88933222-88933241 None:intergenic 20.0%
! AAAATGAAAATAGACAGCAA+AGG + Chr1:88933417-88933436 None:intergenic 25.0%
! AAATGAAAATAGACAGCAAA+GGG + Chr1:88933416-88933435 None:intergenic 25.0%
! AAGTATTAAAAAAGTGGAGA+AGG - Chr1:88933230-88933249 MsG0180005236.01.T01:CDS 25.0%
! AATATGGTCATTTATTGAAC+AGG - Chr1:88933796-88933815 MsG0180005236.01.T01:intron 25.0%
! ACAGTAAAATAGAGAACAAA+GGG + Chr1:88934956-88934975 None:intergenic 25.0%
! AGAGAAATATACCCAATTAA+GGG + Chr1:88933456-88933475 None:intergenic 25.0%
! ATGAAATATTAAGAGACATG+TGG - Chr1:88932823-88932842 MsG0180005236.01.T01:intron 25.0%
! ATGTTAAGAGTTAAAGTTGT+TGG - Chr1:88932050-88932069 MsG0180005236.01.T01:CDS 25.0%
! CAATTGTAGACCATATATTT+GGG + Chr1:88935735-88935754 None:intergenic 25.0%
! CTATTTGAATGCATATTTCA+TGG - Chr1:88935874-88935893 MsG0180005236.01.T01:intron 25.0%
! CTTAATGAAACCTATTCATT+GGG + Chr1:88932925-88932944 None:intergenic 25.0%
! GAATTAAAGAAATTCGTTTG+AGG - Chr1:88932015-88932034 MsG0180005236.01.T01:CDS 25.0%
! GTTCTATTTCAATTCAATTG+TGG - Chr1:88931911-88931930 MsG0180005236.01.T01:three_prime_UTR 25.0%
! TAAAACAAATGAGAGTTCTT+TGG + Chr1:88936020-88936039 None:intergenic 25.0%
! TAACTTCCTGTTGTAATAAT+AGG - Chr1:88933614-88933633 MsG0180005236.01.T01:intron 25.0%
! TACAGTAAAATAGAGAACAA+AGG + Chr1:88934957-88934976 None:intergenic 25.0%
! TCAATTGTAGACCATATATT+TGG + Chr1:88935736-88935755 None:intergenic 25.0%
! TCTTAATGAAACCTATTCAT+TGG + Chr1:88932926-88932945 None:intergenic 25.0%
! TGTTAAGAGTTAAAGTTGTT+GGG - Chr1:88932051-88932070 MsG0180005236.01.T01:CDS 25.0%
! TGTTGTAATAATAGGTATCA+AGG - Chr1:88933622-88933641 MsG0180005236.01.T01:intron 25.0%
! TTCCACAAGTATTAAAAAAG+TGG - Chr1:88933224-88933243 MsG0180005236.01.T01:CDS 25.0%
! TTCCATATTTCACATAACAA+CGG - Chr1:88934379-88934398 MsG0180005236.01.T01:intron 25.0%
! TTGATACCTATTATTACAAC+AGG + Chr1:88933623-88933642 None:intergenic 25.0%
! TTTATAGGAATGCCTAAATA+TGG - Chr1:88933780-88933799 MsG0180005236.01.T01:intron 25.0%
! TTTGATGAAATTGATGCAAT+TGG - Chr1:88934778-88934797 MsG0180005236.01.T01:intron 25.0%
!! AAAAAGTATATTGGTCAGAA+AGG + Chr1:88935567-88935586 None:intergenic 25.0%
!! AGAGAGAACAAAAAGTATAT+TGG + Chr1:88935576-88935595 None:intergenic 25.0%
!! ATACTGAAGTACTTAAAAGA+TGG + Chr1:88935458-88935477 None:intergenic 25.0%
!! ATATGCTGTTTAATATGACA+AGG - Chr1:88933972-88933991 MsG0180005236.01.T01:intron 25.0%
!! CTTCACATTGATAACATATT+TGG + Chr1:88933864-88933883 None:intergenic 25.0%
!! GAGATTTGGCTTATAATATA+AGG + Chr1:88931713-88931732 None:intergenic 25.0%
!! GGTTGGTTATTACTATTATT+TGG - Chr1:88934926-88934945 MsG0180005236.01.T01:intron 25.0%
!!! AACTGATGCTTGTTTTATAA+GGG - Chr1:88934567-88934586 MsG0180005236.01.T01:intron 25.0%
!!! AATGCTTTTTCTATGATCAA+TGG - Chr1:88933111-88933130 MsG0180005236.01.T01:intron 25.0%
!!! ATATACTTTTTGTTCTCTCT+AGG - Chr1:88935576-88935595 MsG0180005236.01.T01:intron 25.0%
!!! GAATTTTTAATTTCTCTGCA+AGG - Chr1:88934417-88934436 MsG0180005236.01.T01:intron 25.0%
!!! GCTGTCTATTTTCATTTTTA+TGG - Chr1:88933419-88933438 MsG0180005236.01.T01:CDS 25.0%
!!! TATGAGAAAAAAAGAGCATT+TGG + Chr1:88935040-88935059 None:intergenic 25.0%
!!! TTTTAAGTACTTCAGTATTC+TGG - Chr1:88935460-88935479 MsG0180005236.01.T01:intron 25.0%
AAATGCTTTACAACATTCTG+CGG + Chr1:88932438-88932457 None:intergenic 30.0%
AAATTGTGAATCAGCTTGAT+GGG - Chr1:88934860-88934879 MsG0180005236.01.T01:intron 30.0%
AACAGAAATTGGGAAACATA+GGG + Chr1:88931894-88931913 None:intergenic 30.0%
AATATTGTTTGAGCACGTTA+TGG + Chr1:88935787-88935806 None:intergenic 30.0%
AATGAAAATAGACAGCAAAG+GGG + Chr1:88933415-88933434 None:intergenic 30.0%
ACATAACAACGGAAATGAAT+TGG - Chr1:88934390-88934409 MsG0180005236.01.T01:intron 30.0%
ACATCATTATATGTCACATC+TGG + Chr1:88934306-88934325 None:intergenic 30.0%
AGAAAAAAAATCACCTGAAG+AGG + Chr1:88933722-88933741 None:intergenic 30.0%
ATTGTTAATATACCGTGATG+CGG - Chr1:88932132-88932151 MsG0180005236.01.T01:CDS 30.0%
CAGTGAATAAAGTCATCAAA+GGG - Chr1:88935688-88935707 MsG0180005236.01.T01:intron 30.0%
GAGAGAAATATACCCAATTA+AGG + Chr1:88933457-88933476 None:intergenic 30.0%
GATAATGAAAGGCAAAATCA+AGG - Chr1:88935080-88935099 MsG0180005236.01.T01:intron 30.0%
GATGTGACATATAATGATGT+TGG - Chr1:88934306-88934325 MsG0180005236.01.T01:intron 30.0%
GGAGAAGGAAATTAAAGATA+TGG - Chr1:88933245-88933264 MsG0180005236.01.T01:CDS 30.0%
GTGTGTAACTATGTATTTAG+TGG - Chr1:88932966-88932985 MsG0180005236.01.T01:CDS 30.0%
GTTGTTACTCTTCTTTCTTT+GGG + Chr1:88934153-88934172 None:intergenic 30.0%
TAAGACAAACCACTATGAAT+GGG + Chr1:88933547-88933566 None:intergenic 30.0%
TGAAGGAACAACTAGATAAT+TGG - Chr1:88933496-88933515 MsG0180005236.01.T01:CDS 30.0%
TGGGTACACTTAGTAATTAA+AGG + Chr1:88932906-88932925 None:intergenic 30.0%
TGTTGTTACTCTTCTTTCTT+TGG + Chr1:88934154-88934173 None:intergenic 30.0%
TTATCATTGTTTCCATCATC+TGG - Chr1:88934690-88934709 MsG0180005236.01.T01:intron 30.0%
TTCCGTTGTTATGTGAAATA+TGG + Chr1:88934384-88934403 None:intergenic 30.0%
TTGGATCGTAAAGTTGAATT+TGG - Chr1:88935270-88935289 MsG0180005236.01.T01:intron 30.0%
TTGTAAGTGATCCCTTAATT+GGG - Chr1:88933442-88933461 MsG0180005236.01.T01:CDS 30.0%
TTTGTGTAAATTGATGCTTG+TGG - Chr1:88932079-88932098 MsG0180005236.01.T01:CDS 30.0%
! AAAGAAATTCGTTTGAGGTA+GGG - Chr1:88932020-88932039 MsG0180005236.01.T01:CDS 30.0%
! AATGTTGTAAAGCATTTGGA+AGG - Chr1:88932441-88932460 MsG0180005236.01.T01:CDS 30.0%
! ATGTTGTAAAGCATTTGGAA+GGG - Chr1:88932442-88932461 MsG0180005236.01.T01:CDS 30.0%
! ATTTCATGGTTGACTCTTAA+AGG - Chr1:88935888-88935907 MsG0180005236.01.T01:intron 30.0%
! GAACTTGTTCAGAAATATGT+TGG - Chr1:88934601-88934620 MsG0180005236.01.T01:intron 30.0%
! GCACTTTGAAAAAATTCTAC+AGG + Chr1:88933752-88933771 None:intergenic 30.0%
! GCTTTTTGTCCACAAATTTT+AGG - Chr1:88935208-88935227 MsG0180005236.01.T01:intron 30.0%
! GTAACACTTGGATCAATTTT+TGG + Chr1:88934261-88934280 None:intergenic 30.0%
! TAAAGAAATTCGTTTGAGGT+AGG - Chr1:88932019-88932038 MsG0180005236.01.T01:CDS 30.0%
!! AGGAAACATCAAAGTTTTGA+TGG - Chr1:88934894-88934913 MsG0180005236.01.T01:intron 30.0%
!! GATGATTTCAGTTTGTTGTT+GGG - Chr1:88934039-88934058 MsG0180005236.01.T01:intron 30.0%
!! TGATGATTTCAGTTTGTTGT+TGG - Chr1:88934038-88934057 MsG0180005236.01.T01:intron 30.0%
!! TTTATTTTCTCTCGGTATTG+TGG - Chr1:88933378-88933397 MsG0180005236.01.T01:intron 30.0%
!! TTTCTTGTTTGCTATGTAGA+TGG - Chr1:88933323-88933342 MsG0180005236.01.T01:intron 30.0%
!!! CTCCACTTTTTTAATACTTG+TGG + Chr1:88933229-88933248 None:intergenic 30.0%
!!! GAACTGATGCTTGTTTTATA+AGG - Chr1:88934566-88934585 MsG0180005236.01.T01:intron 30.0%
AAAAGATTGATGTGACGCAT+AGG + Chr1:88933902-88933921 None:intergenic 35.0%
AAATTTCTCTGGATGAAGCA+TGG + Chr1:88934455-88934474 None:intergenic 35.0%
AAGAGTTAAAGTTGTTGGGT+TGG - Chr1:88932055-88932074 MsG0180005236.01.T01:CDS 35.0%
AATTTCTCTGGATGAAGCAT+GGG + Chr1:88934454-88934473 None:intergenic 35.0%
ACAAAAAGCCATGAGCTATA+TGG + Chr1:88935197-88935216 None:intergenic 35.0%
ACACTGCGATGATGAAATAA+AGG + Chr1:88934201-88934220 None:intergenic 35.0%
ACTAAGTGTACCCAATGAAT+AGG - Chr1:88932912-88932931 MsG0180005236.01.T01:CDS 35.0%
ACTCAAATGATACCAGATGA+TGG + Chr1:88934705-88934724 None:intergenic 35.0%
ACTGAAATCATCAAAGCAGT+AGG + Chr1:88934031-88934050 None:intergenic 35.0%
ACTGGTAAGAACATAACAAC+TGG - Chr1:88935402-88935421 MsG0180005236.01.T01:intron 35.0%
AGAGAGAAAGAGACATACAT+AGG + Chr1:88931865-88931884 None:intergenic 35.0%
AGAGTTAAAGTTGTTGGGTT+GGG - Chr1:88932056-88932075 MsG0180005236.01.T01:CDS 35.0%
AGGAATCTGGATCTGATATT+TGG + Chr1:88934232-88934251 None:intergenic 35.0%
AGGTCTAGAAGGACTATAAA+AGG + Chr1:88932301-88932320 None:intergenic 35.0%
AGTTGTTATGTTCTTACCAG+TGG + Chr1:88935403-88935422 None:intergenic 35.0%
ATAGTCCTTCTAGACCTAAT+GGG - Chr1:88932304-88932323 MsG0180005236.01.T01:intron 35.0%
CAGAAAGCAAGTGATGTTTA+TGG - Chr1:88933026-88933045 MsG0180005236.01.T01:intron 35.0%
CTAAGACAAACCACTATGAA+TGG + Chr1:88933548-88933567 None:intergenic 35.0%
CTGGTAAGAACATAACAACT+GGG - Chr1:88935403-88935422 MsG0180005236.01.T01:intron 35.0%
GAAATTGTGAATCAGCTTGA+TGG - Chr1:88934859-88934878 MsG0180005236.01.T01:intron 35.0%
GAACAGAAATTGGGAAACAT+AGG + Chr1:88931895-88931914 None:intergenic 35.0%
GATGAAATTGATGCAATTGG+AGG - Chr1:88934781-88934800 MsG0180005236.01.T01:intron 35.0%
GCAGTGAATAAAGTCATCAA+AGG - Chr1:88935687-88935706 MsG0180005236.01.T01:intron 35.0%
GGTTTCATTAAGAGTTAACG+AGG - Chr1:88932933-88932952 MsG0180005236.01.T01:CDS 35.0%
GTGACATATAATGATGTTGG+TGG - Chr1:88934309-88934328 MsG0180005236.01.T01:intron 35.0%
GTTGTAAGTGATCCCTTAAT+TGG - Chr1:88933441-88933460 MsG0180005236.01.T01:CDS 35.0%
TATAGTCCTTCTAGACCTAA+TGG - Chr1:88932303-88932322 MsG0180005236.01.T01:intron 35.0%
TATTTGGCATCTTCAGAGTT+TGG + Chr1:88933848-88933867 None:intergenic 35.0%
TCCGTGAAAACTATTCCAAA+GGG - Chr1:88935815-88935834 MsG0180005236.01.T01:intron 35.0%
TCTAGAAGGACTATAAAAGG+AGG + Chr1:88932298-88932317 None:intergenic 35.0%
TGACTTTATTCACTGCATCA+AGG + Chr1:88935683-88935702 None:intergenic 35.0%
TGTTCAGAAATATGTTGGTG+AGG - Chr1:88934606-88934625 MsG0180005236.01.T01:intron 35.0%
TTATTTCGTCCCATTCATAG+TGG - Chr1:88933535-88933554 MsG0180005236.01.T01:intron 35.0%
TTCTGATAAGCAAATGATGC+AGG - Chr1:88933688-88933707 MsG0180005236.01.T01:CDS 35.0%
TTTCTCTTCAACTGTCATCA+TGG + Chr1:88934283-88934302 None:intergenic 35.0%
TTTGTCTTAGTTGCTTGAGT+TGG - Chr1:88933558-88933577 MsG0180005236.01.T01:intron 35.0%
! AAACGCGGATTATAGCTTAA+TGG + Chr1:88932351-88932370 None:intergenic 35.0%
! AAACTATTCCAAAGGGCATA+TGG - Chr1:88935822-88935841 MsG0180005236.01.T01:intron 35.0%
! AAATTTTAGGCCTGACACTT+TGG - Chr1:88935221-88935240 MsG0180005236.01.T01:intron 35.0%
! AACGCGGATTATAGCTTAAT+GGG + Chr1:88932350-88932369 None:intergenic 35.0%
! AAGAAAGTGAATGACTTGTG+TGG - Chr1:88933270-88933289 MsG0180005236.01.T01:CDS 35.0%
! AAGATGTTGGTTGTTTGTAC+AGG - Chr1:88932373-88932392 MsG0180005236.01.T01:CDS 35.0%
! AGAGACATACATAGGTTTTG+AGG + Chr1:88931857-88931876 None:intergenic 35.0%
! GAAGTACTTAAAAGATGGTC+AGG + Chr1:88935453-88935472 None:intergenic 35.0%
! GCAGAATGTTGTAAAGCATT+TGG - Chr1:88932437-88932456 MsG0180005236.01.T01:CDS 35.0%
! GTTCAGAAATATGTTGGTGA+GGG - Chr1:88934607-88934626 MsG0180005236.01.T01:intron 35.0%
! TGTTGTAAAGCATTTGGAAG+GGG - Chr1:88932443-88932462 MsG0180005236.01.T01:CDS 35.0%
! TTCAGAAATATGTTGGTGAG+GGG - Chr1:88934608-88934627 MsG0180005236.01.T01:intron 35.0%
! TTTCTAGTCAAAACTTGTCC+TGG - Chr1:88935492-88935511 MsG0180005236.01.T01:intron 35.0%
!! ACACTTGGATCAATTTTTGG+AGG + Chr1:88934258-88934277 None:intergenic 35.0%
!! TAATGATGTTGGTGGTTGTA+AGG - Chr1:88934317-88934336 MsG0180005236.01.T01:intron 35.0%
!!! AGGACAAGTTTTGACTAGAA+AGG + Chr1:88935493-88935512 None:intergenic 35.0%
!!! GCTTGTTTTATAAGGGTCAT+TGG - Chr1:88934574-88934593 MsG0180005236.01.T01:intron 35.0%
AAAGGTCAAACACGAAGACA+AGG + Chr1:88934183-88934202 None:intergenic 40.0%
AAGCAACTTTCACCTTGGTT+TGG - Chr1:88936070-88936089 MsG0180005236.01.T01:five_prime_UTR 40.0%
AATCAAGCTAGCAATGAGGT+AGG - Chr1:88932722-88932741 MsG0180005236.01.T01:intron 40.0%
ACTGTCATCATGGTAACACT+TGG + Chr1:88934273-88934292 None:intergenic 40.0%
AGTGTCAGGCCTAAAATTTG+TGG + Chr1:88935220-88935239 None:intergenic 40.0%
ATAGCCTCGCAATATATACC+TGG + Chr1:88932868-88932887 None:intergenic 40.0%
ATCTAGCTAATACCGAGGTA+AGG - Chr1:88932604-88932623 MsG0180005236.01.T01:intron 40.0%
ATGCAAGGGTCAAAGTGAAA+AGG + Chr1:88935984-88936003 None:intergenic 40.0%
ATGTTCTTACCAGTGGAGTT+TGG + Chr1:88935396-88935415 None:intergenic 40.0%
CAATGTGAAGCAGATTGCAA+AGG - Chr1:88933874-88933893 MsG0180005236.01.T01:intron 40.0%
CAGTGCAACTCCCAAATATA+TGG - Chr1:88935722-88935741 MsG0180005236.01.T01:intron 40.0%
CATCCTCTTGCGATAATGAA+AGG - Chr1:88935069-88935088 MsG0180005236.01.T01:intron 40.0%
CCAAGCTTGACAAATTTCTC+TGG + Chr1:88934466-88934485 None:intergenic 40.0%
CCAGAGAAATTTGTCAAGCT+TGG - Chr1:88934463-88934482 MsG0180005236.01.T01:intron 40.0%
CTCAACTAAGTTGTGCAAGT+CGG + Chr1:88932481-88932500 None:intergenic 40.0%
CTCCGTGAAAACTATTCCAA+AGG - Chr1:88935814-88935833 MsG0180005236.01.T01:intron 40.0%
CTTGGAATTGATCCTCCAAA+GGG - Chr1:88934481-88934500 MsG0180005236.01.T01:CDS 40.0%
CTTTCATTATCGCAAGAGGA+TGG + Chr1:88935071-88935090 None:intergenic 40.0%
GAACAATCAAGCTAGCAATG+AGG - Chr1:88932718-88932737 MsG0180005236.01.T01:intron 40.0%
GAACAATCTAGCTAATACCG+AGG - Chr1:88932599-88932618 MsG0180005236.01.T01:intron 40.0%
GACTTGCACAACTTAGTTGA+GGG - Chr1:88932480-88932499 MsG0180005236.01.T01:CDS 40.0%
GAGAACCATGAACTGTGAAA+GGG - Chr1:88935338-88935357 MsG0180005236.01.T01:intron 40.0%
GATATCCCTTTCACAGTTCA+TGG + Chr1:88935346-88935365 None:intergenic 40.0%
GTATATATTGCGAGGCTATG+TGG - Chr1:88932869-88932888 MsG0180005236.01.T01:CDS 40.0%
GTCAAAAGCAACTTTCACCT+TGG - Chr1:88936065-88936084 MsG0180005236.01.T01:five_prime_UTR 40.0%
TATCAGAAACAAGATCCCAC+TGG + Chr1:88933676-88933695 None:intergenic 40.0%
TCAAAAAGCAGCATTAGGAG+CGG - Chr1:88931673-88931692 MsG0180005236.01.T01:three_prime_UTR 40.0%
TCAAAGAACCATATGCCCTT+TGG + Chr1:88935833-88935852 None:intergenic 40.0%
TGATAAGCAAATGATGCAGG+AGG - Chr1:88933691-88933710 MsG0180005236.01.T01:CDS 40.0%
TGTTCTTACCAGTGGAGTTT+GGG + Chr1:88935395-88935414 None:intergenic 40.0%
TTGCCTTTCATTATCGCAAG+AGG + Chr1:88935075-88935094 None:intergenic 40.0%
TTGGCGTGCTACATTAATGA+TGG + Chr1:88935021-88935040 None:intergenic 40.0%
! AGGAACTGGCAAAACACTTT+TGG - Chr1:88934525-88934544 MsG0180005236.01.T01:CDS 40.0%
! ATCTCAAATCTGAAGCTGCT+TGG - Chr1:88931728-88931747 MsG0180005236.01.T01:three_prime_UTR 40.0%
! GATTATAGCTTAATGGGCCT+AGG + Chr1:88932344-88932363 None:intergenic 40.0%
! GATTTGTTCCACTTTACGCA+GGG - Chr1:88933189-88933208 MsG0180005236.01.T01:CDS 40.0%
! GCAGCTTCAGATTTGAGATT+TGG + Chr1:88931727-88931746 None:intergenic 40.0%
! GTTGTAAAGCATTTGGAAGG+GGG - Chr1:88932444-88932463 MsG0180005236.01.T01:CDS 40.0%
! TCAGAAATATGTTGGTGAGG+GGG - Chr1:88934609-88934628 MsG0180005236.01.T01:intron 40.0%
! TCTCTCTAGGAGCTGATATA+AGG - Chr1:88935589-88935608 MsG0180005236.01.T01:intron 40.0%
!! AACTTGTTACCTCGTGTAGA+TGG - Chr1:88934726-88934745 MsG0180005236.01.T01:intron 40.0%
!! AAGTTTTGATGGCAACGAAC+AGG - Chr1:88934905-88934924 MsG0180005236.01.T01:intron 40.0%
!! TGATTTGTTCCACTTTACGC+AGG - Chr1:88933188-88933207 MsG0180005236.01.T01:CDS 40.0%
!! TTTCAGTTTGTTGTTGGGCT+AGG - Chr1:88934044-88934063 MsG0180005236.01.T01:CDS 40.0%
!!! AAAAGTGTTTTGCCAGTTCC+TGG + Chr1:88934526-88934545 None:intergenic 40.0%
!!! AATGCACGCCTTTTTTGAAC+GGG + Chr1:88934752-88934771 None:intergenic 40.0%
!!! CAATGCACGCCTTTTTTGAA+CGG + Chr1:88934753-88934772 None:intergenic 40.0%
!!! CTTTGGAATAGTTTTCACGG+AGG + Chr1:88935816-88935835 None:intergenic 40.0%
!!! GCCCTTTGGAATAGTTTTCA+CGG + Chr1:88935819-88935838 None:intergenic 40.0%
AACTTTGTGCATCCGCATCA+CGG + Chr1:88932147-88932166 None:intergenic 45.0%
AATCCGCGTTTCGAAGATGT+TGG - Chr1:88932360-88932379 MsG0180005236.01.T01:intron 45.0%
ACAGTCGTGTATATCAGTCC+AGG - Chr1:88932847-88932866 MsG0180005236.01.T01:CDS 45.0%
ACCTATTCAGTGCTCCTACA+AGG - Chr1:88932220-88932239 MsG0180005236.01.T01:intron 45.0%
ACGCATTCCTTCCTCTATGT+CGG + Chr1:88934087-88934106 None:intergenic 45.0%
AGATAGGATCTACCTGTGCA+AGG - Chr1:88932560-88932579 MsG0180005236.01.T01:intron 45.0%
AGCAACTAAGAAGCCTAGCA+AGG + Chr1:88933085-88933104 None:intergenic 45.0%
AGCTATATGGTCAGCAACAC+AGG + Chr1:88935184-88935203 None:intergenic 45.0%
AGTTCTATTAGCAACAGCCC+TGG + Chr1:88934551-88934570 None:intergenic 45.0%
ATAGAGGAAGGAATGCGTGT+TGG - Chr1:88934089-88934108 MsG0180005236.01.T01:CDS 45.0%
ATTCCTTCCTCTATGTCGGT+GGG + Chr1:88934083-88934102 None:intergenic 45.0%
CAACCAACATCTTCGAAACG+CGG + Chr1:88932366-88932385 None:intergenic 45.0%
CAGTCCAGGTATATATTGCG+AGG - Chr1:88932861-88932880 MsG0180005236.01.T01:CDS 45.0%
CCATAACAAAGCACACCCTT+TGG + Chr1:88934499-88934518 None:intergenic 45.0%
CGACTTGCACAACTTAGTTG+AGG - Chr1:88932479-88932498 MsG0180005236.01.T01:CDS 45.0%
CGAGAACCATGAACTGTGAA+AGG - Chr1:88935337-88935356 MsG0180005236.01.T01:intron 45.0%
CTTTGGATCCAGCACTATTG+CGG - Chr1:88935238-88935257 MsG0180005236.01.T01:intron 45.0%
GATGGTTCGTGAACTGTTTC+AGG - Chr1:88934636-88934655 MsG0180005236.01.T01:intron 45.0%
GATTCCTGACTTTCCTTGCT+AGG - Chr1:88933069-88933088 MsG0180005236.01.T01:intron 45.0%
GCAAAGACGATGCAATGCAA+GGG + Chr1:88935998-88936017 None:intergenic 45.0%
GCTATATGGTCAGCAACACA+GGG + Chr1:88935183-88935202 None:intergenic 45.0%
GCTTGGAATTGATCCTCCAA+AGG - Chr1:88934480-88934499 MsG0180005236.01.T01:CDS 45.0%
GGTATCAAGGAGTCTGATAC+TGG - Chr1:88933635-88933654 MsG0180005236.01.T01:intron 45.0%
GTACAATCAAGCTAGTGCTG+AGG - Chr1:88932659-88932678 MsG0180005236.01.T01:intron 45.0%
GTAGATGGCCCGTTCAAAAA+AGG - Chr1:88934741-88934760 MsG0180005236.01.T01:intron 45.0%
GTTGCTGACCATATAGCTCA+TGG - Chr1:88935186-88935205 MsG0180005236.01.T01:intron 45.0%
TAACAAAGCACACCCTTTGG+AGG + Chr1:88934496-88934515 None:intergenic 45.0%
TAACCAAAGAGAGGCCCATT+AGG + Chr1:88932321-88932340 None:intergenic 45.0%
TAGAGGAAGGAATGCGTGTT+GGG - Chr1:88934090-88934109 MsG0180005236.01.T01:CDS 45.0%
TATTCAGTGCTCCTACAAGG+AGG - Chr1:88932223-88932242 MsG0180005236.01.T01:intron 45.0%
TGATGTGGTTGAGTCGTTCT+AGG - Chr1:88932509-88932528 MsG0180005236.01.T01:CDS 45.0%
TGCAAAGATTCCTCAAAGCC+AGG + Chr1:88935513-88935532 None:intergenic 45.0%
TGTGTCCTACTCTCTAGATC+AGG + Chr1:88935300-88935319 None:intergenic 45.0%
TTCCACTTTACGCAGGGTTT+GGG - Chr1:88933195-88933214 MsG0180005236.01.T01:CDS 45.0%
TTGAGCACGTTATGGTCTCT+GGG + Chr1:88935779-88935798 None:intergenic 45.0%
TTGCTAGGCTTCTTAGTTGC+TGG - Chr1:88933084-88933103 MsG0180005236.01.T01:intron 45.0%
TTTGAGCACGTTATGGTCTC+TGG + Chr1:88935780-88935799 None:intergenic 45.0%
! AATCAAGCTAGTGCTGAGGT+AGG - Chr1:88932663-88932682 MsG0180005236.01.T01:intron 45.0%
! AGTCAAGCTAGTGCTGAGAT+AGG - Chr1:88932544-88932563 MsG0180005236.01.T01:intron 45.0%
! CCAAAGGGTGTGCTTTGTTA+TGG - Chr1:88934496-88934515 MsG0180005236.01.T01:CDS 45.0%
! TGGCAAAACACTTTTGGCCA+GGG - Chr1:88934531-88934550 MsG0180005236.01.T01:CDS 45.0%
! TTCGTTTGAGGTAGGGTTTC+TGG - Chr1:88932027-88932046 MsG0180005236.01.T01:CDS 45.0%
! TTTGATGGCAACGAACAGGT+TGG - Chr1:88934909-88934928 MsG0180005236.01.T01:intron 45.0%
!! CAAAACTTGTCCTGGCTTTG+AGG - Chr1:88935500-88935519 MsG0180005236.01.T01:intron 45.0%
!! GGATCAATTTTTGGAGGCAG+AGG + Chr1:88934252-88934271 None:intergenic 45.0%
!! TCCGTTTTGAGCTTCTTGCT+CGG - Chr1:88935364-88935383 MsG0180005236.01.T01:intron 45.0%
!! TCCTTGTAGGAGCACTGAAT+AGG + Chr1:88932224-88932243 None:intergenic 45.0%
!! TGGTGTTGGTGGTGATAATG+AGG - Chr1:88934819-88934838 MsG0180005236.01.T01:intron 45.0%
!! TTTTTGGAGGCAGAGGAATC+TGG + Chr1:88934245-88934264 None:intergenic 45.0%
ACTTTACGATCCAATCGCCC+AGG + Chr1:88935264-88935283 None:intergenic 50.0%
AGAGGCCCATTAGGTCTAGA+AGG + Chr1:88932312-88932331 None:intergenic 50.0%
CATTCCTTCCTCTATGTCGG+TGG + Chr1:88934084-88934103 None:intergenic 50.0%
CGATGTCATCCTCATCGAGA+GGG + Chr1:88931830-88931849 None:intergenic 50.0%
CTAATACCGAGGTAAGGACC+TGG - Chr1:88932610-88932629 MsG0180005236.01.T01:intron 50.0%
GAAGCCTAGCAAGGAAAGTC+AGG + Chr1:88933076-88933095 None:intergenic 50.0%
GCACGATTTGACGATGGTGT+TGG - Chr1:88934805-88934824 MsG0180005236.01.T01:intron 50.0%
GCCGAGCAAGAAGCTCAAAA+CGG + Chr1:88935368-88935387 None:intergenic 50.0%
GGCAAAGACGATGCAATGCA+AGG + Chr1:88935999-88936018 None:intergenic 50.0%
GGTTGTTTGTACAGGACACG+TGG - Chr1:88932381-88932400 MsG0180005236.01.T01:CDS 50.0%
GTTCCACTTTACGCAGGGTT+TGG - Chr1:88933194-88933213 MsG0180005236.01.T01:CDS 50.0%
TCCTACTCTCTAGATCAGGC+AGG + Chr1:88935296-88935315 None:intergenic 50.0%
TCTACCTGTGCAAGGTGAGT+TGG - Chr1:88932568-88932587 MsG0180005236.01.T01:intron 50.0%
TCTAGCTACACCAAGCCAGT+GGG - Chr1:88933658-88933677 MsG0180005236.01.T01:intron 50.0%
TGGGAGTTGCACTGAACTTC+TGG + Chr1:88935716-88935735 None:intergenic 50.0%
TGTTATGGTCCACCAGGAAC+TGG - Chr1:88934511-88934530 MsG0180005236.01.T01:CDS 50.0%
TTACAGTCTTCCTTCGGGCA+CGG + Chr1:88935647-88935666 None:intergenic 50.0%
TTCCTTCCTCTATGTCGGTG+GGG + Chr1:88934082-88934101 None:intergenic 50.0%
TTCTTGGAGCTCCTCCTTGT+AGG + Chr1:88932237-88932256 None:intergenic 50.0%
! AAGTTAGTGCAGTGCTGAGC+GGG - Chr1:88932785-88932804 MsG0180005236.01.T01:intron 50.0%
! AATATGTTGGTGAGGGGGCT+CGG - Chr1:88934614-88934633 MsG0180005236.01.T01:intron 50.0%
! AGACCTAATGGGCCTCTCTT+TGG - Chr1:88932315-88932334 MsG0180005236.01.T01:intron 50.0%
! AGTGCTGGATCCAAAGTGTC+AGG + Chr1:88935234-88935253 None:intergenic 50.0%
! AGTGTTTTGCCAGTTCCTGG+TGG + Chr1:88934523-88934542 None:intergenic 50.0%
! CAAGTTAGTGCAGTGCTGAG+CGG - Chr1:88932784-88932803 MsG0180005236.01.T01:intron 50.0%
! CGATTTGACGATGGTGTTGG+TGG - Chr1:88934808-88934827 MsG0180005236.01.T01:intron 50.0%
! CTGGCAAAACACTTTTGGCC+AGG - Chr1:88934530-88934549 MsG0180005236.01.T01:CDS 50.0%
! GAAACAAGATCCCACTGGCT+TGG + Chr1:88933671-88933690 None:intergenic 50.0%
! GTGCTTTGTTATGGTCCACC+AGG - Chr1:88934505-88934524 MsG0180005236.01.T01:CDS 50.0%
! TGTTGTTGGGCTAGGAGACA+AGG - Chr1:88934052-88934071 MsG0180005236.01.T01:CDS 50.0%
!! CTTGATGGGTTTGATGCTCG+AGG - Chr1:88934874-88934893 MsG0180005236.01.T01:intron 50.0%
!! TTGTGCAAGTCGGCTTGTTG+TGG + Chr1:88932471-88932490 None:intergenic 50.0%
AGTTGAGGGCGAGCTTGATG+TGG - Chr1:88932494-88932513 MsG0180005236.01.T01:CDS 55.0%
ATCCAGCACTATTGCGGCCT+GGG - Chr1:88935244-88935263 MsG0180005236.01.T01:intron 55.0%
CAATGAGGTAGGACCTGACC+GGG - Chr1:88932733-88932752 MsG0180005236.01.T01:intron 55.0%
GCAATGAGGTAGGACCTGAC+CGG - Chr1:88932732-88932751 MsG0180005236.01.T01:intron 55.0%
GCCTGCCTGATCTAGAGAGT+AGG - Chr1:88935292-88935311 MsG0180005236.01.T01:intron 55.0%
GCGATGTCATCCTCATCGAG+AGG + Chr1:88931831-88931850 None:intergenic 55.0%
GGGCCTAGGTAACCAAAGAG+AGG + Chr1:88932330-88932349 None:intergenic 55.0%
GGGCCTCTCTTTGGTTACCT+AGG - Chr1:88932324-88932343 MsG0180005236.01.T01:intron 55.0%
GTCCCAAACCCTGCGTAAAG+TGG + Chr1:88933200-88933219 None:intergenic 55.0%
GTCTAGCTACACCAAGCCAG+TGG - Chr1:88933657-88933676 MsG0180005236.01.T01:intron 55.0%
TCCTTCCTCTATGTCGGTGG+GGG + Chr1:88934081-88934100 None:intergenic 55.0%
TGCTGAGGTAGGATGTGGCT+GGG - Chr1:88932674-88932693 MsG0180005236.01.T01:intron 55.0%
TGTATGCTATCCGTGCCCGA+AGG - Chr1:88935634-88935653 MsG0180005236.01.T01:intron 55.0%
TTGAACGGGCCATCTACACG+AGG + Chr1:88934738-88934757 None:intergenic 55.0%
! AGGAGTGTGTGCACTGAAGC+TGG - Chr1:88935609-88935628 MsG0180005236.01.T01:intron 55.0%
! AGTTAGTGCAGTGCTGAGCG+GGG - Chr1:88932786-88932805 MsG0180005236.01.T01:intron 55.0%
! GCACGTTATGGTCTCTGGGA+AGG + Chr1:88935775-88935794 None:intergenic 55.0%
! GCTAGTGCTGAGGTAGGATG+TGG - Chr1:88932669-88932688 MsG0180005236.01.T01:intron 55.0%
! GGAGGTGCACGATTTGACGA+TGG - Chr1:88934799-88934818 MsG0180005236.01.T01:intron 55.0%
ACCCAGCCAGGTCCTTACCT+CGG + Chr1:88932619-88932638 None:intergenic 60.0%
ACCGAGGTAAGGACCTGGCT+GGG - Chr1:88932615-88932634 MsG0180005236.01.T01:intron 60.0%
ACTATTGCGGCCTGGGCGAT+TGG - Chr1:88935251-88935270 MsG0180005236.01.T01:intron 60.0%
CATCCTCATCGAGAGGGCGA+GGG + Chr1:88931824-88931843 None:intergenic 60.0%
CGGCTTTGCCCAAACTCCAC+TGG - Chr1:88935384-88935403 MsG0180005236.01.T01:intron 60.0%
CGTGCCAACTCACCTTGCAC+AGG + Chr1:88932575-88932594 None:intergenic 60.0%
CTAACTCACCTCACCCAGCC+AGG + Chr1:88932631-88932650 None:intergenic 60.0%
GATCCAGCACTATTGCGGCC+TGG - Chr1:88935243-88935262 MsG0180005236.01.T01:intron 60.0%
GGTTTCCCCCACCGACATAG+AGG - Chr1:88934073-88934092 MsG0180005236.01.T01:CDS 60.0%
GTGCTGAGGTAGGATGTGGC+TGG - Chr1:88932673-88932692 MsG0180005236.01.T01:intron 60.0%
TACCGAGGTAAGGACCTGGC+TGG - Chr1:88932614-88932633 MsG0180005236.01.T01:intron 60.0%
TCATCCTCATCGAGAGGGCG+AGG + Chr1:88931825-88931844 None:intergenic 60.0%
TCCCCCACCGACATAGAGGA+AGG - Chr1:88934077-88934096 MsG0180005236.01.T01:CDS 60.0%
! GTTAGTGCAGTGCTGAGCGG+GGG - Chr1:88932787-88932806 MsG0180005236.01.T01:intron 60.0%
GAACCCTCGCCCTCTCGATG+AGG - Chr1:88931818-88931837 MsG0180005236.01.T01:three_prime_UTR 65.0%
GCAGGAGGAGCAGCCTCTTC+AGG - Chr1:88933706-88933725 MsG0180005236.01.T01:intron 65.0%
GGTAAGGACCTGGCTGGGTG+AGG - Chr1:88932620-88932639 MsG0180005236.01.T01:intron 65.0%
TCATGCCAGCTCTCCTCGCC+CGG + Chr1:88932754-88932773 None:intergenic 65.0%
! TGTTGGTGAGGGGGCTCGGA+TGG - Chr1:88934618-88934637 MsG0180005236.01.T01:intron 65.0%
AGGTAGGACCTGACCGGGCG+AGG - Chr1:88932738-88932757 MsG0180005236.01.T01:intron 70.0%
CGCCCAGGCCGCAATAGTGC+TGG + Chr1:88935249-88935268 None:intergenic 70.0%
CCAGCTCTCCTCGCCCGGTC+AGG + Chr1:88932749-88932768 None:intergenic 75.0%
CCTGACCGGGCGAGGAGAGC+TGG - Chr1:88932746-88932765 MsG0180005236.01.T01:intron 75.0%
! GTGCAGTGCTGAGCGGGGGC+TGG - Chr1:88932791-88932810 MsG0180005236.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 88931671 88936099 88931671 ID=MsG0180005236.01;Name=MsG0180005236.01
Chr1 mRNA 88931671 88936099 88931671 ID=MsG0180005236.01.T01;Parent=MsG0180005236.01;Name=MsG0180005236.01.T01;_AED=0.48;_eAED=0.48;_QI=109|1|1|1|1|1|10|344|426
Chr1 exon 88931671 88932172 88931671 ID=MsG0180005236.01.T01:exon:11145;Parent=MsG0180005236.01.T01
Chr1 exon 88932365 88932540 88932365 ID=MsG0180005236.01.T01:exon:11144;Parent=MsG0180005236.01.T01
Chr1 exon 88932844 88933025 88932844 ID=MsG0180005236.01.T01:exon:11143;Parent=MsG0180005236.01.T01
Chr1 exon 88933113 88933331 88933113 ID=MsG0180005236.01.T01:exon:11142;Parent=MsG0180005236.01.T01
Chr1 exon 88933408 88933552 88933408 ID=MsG0180005236.01.T01:exon:11141;Parent=MsG0180005236.01.T01
Chr1 exon 88933659 88933720 88933659 ID=MsG0180005236.01.T01:exon:11140;Parent=MsG0180005236.01.T01
Chr1 exon 88933875 88933952 88933875 ID=MsG0180005236.01.T01:exon:11139;Parent=MsG0180005236.01.T01
Chr1 exon 88934043 88934134 88934043 ID=MsG0180005236.01.T01:exon:11138;Parent=MsG0180005236.01.T01
Chr1 exon 88934479 88934560 88934479 ID=MsG0180005236.01.T01:exon:11137;Parent=MsG0180005236.01.T01
Chr1 exon 88935904 88936099 88935904 ID=MsG0180005236.01.T01:exon:11136;Parent=MsG0180005236.01.T01
Chr1 five_prime_UTR 88935991 88936099 88935991 ID=MsG0180005236.01.T01:five_prime_utr;Parent=MsG0180005236.01.T01
Chr1 CDS 88935904 88935990 88935904 ID=MsG0180005236.01.T01:cds;Parent=MsG0180005236.01.T01
Chr1 CDS 88934479 88934560 88934479 ID=MsG0180005236.01.T01:cds;Parent=MsG0180005236.01.T01
Chr1 CDS 88934043 88934134 88934043 ID=MsG0180005236.01.T01:cds;Parent=MsG0180005236.01.T01
Chr1 CDS 88933875 88933952 88933875 ID=MsG0180005236.01.T01:cds;Parent=MsG0180005236.01.T01
Chr1 CDS 88933659 88933720 88933659 ID=MsG0180005236.01.T01:cds;Parent=MsG0180005236.01.T01
Chr1 CDS 88933408 88933552 88933408 ID=MsG0180005236.01.T01:cds;Parent=MsG0180005236.01.T01
Chr1 CDS 88933113 88933331 88933113 ID=MsG0180005236.01.T01:cds;Parent=MsG0180005236.01.T01
Chr1 CDS 88932844 88933025 88932844 ID=MsG0180005236.01.T01:cds;Parent=MsG0180005236.01.T01
Chr1 CDS 88932365 88932540 88932365 ID=MsG0180005236.01.T01:cds;Parent=MsG0180005236.01.T01
Chr1 CDS 88932015 88932172 88932015 ID=MsG0180005236.01.T01:cds;Parent=MsG0180005236.01.T01
Chr1 three_prime_UTR 88931671 88932014 88931671 ID=MsG0180005236.01.T01:three_prime_utr;Parent=MsG0180005236.01.T01
Gene Sequence

>MsG0180005236.01.T01

ATGTCTAATGAACACGAAGACGATCTCAAAGACGAGAAGAACCCTCGCCCTCTCGATGAGGATGACATCGCTCTCCTCAAAACCTATGGTTTGGGACCTTATTCCACAAGTATTAAAAAAGTGGAGAAGGAAATTAAAGATATGGCAAAGAAAGTGAATGACTTGTGTGGTATCAAGGAGTCTGATACTGGTCTAGCTACACCAAGCCAGTGGGATCTTGTTTCTGATAAGCAAATGATGCAGGAGGAGCAGCCTCTTCAGGTTGCAAGATGCACGAAAATTATAAATCCAAACTCTGAAGATGCCAAATATGTTATCAATGTGAAGCAGATTGCAAAGTTTGTTGTTGGGCTAGGAGACAAGGTTTCCCCCACCGACATAGAGGAAGGAATGCGTGTTGGTGTTGATAGAACCAAATATCAGATCCAGATTCCTCTGCCTCCAAAAATTGATCCAAGTGTTACCATGATGACAGTTGAAGAGAAACCAGATGTGACATATAATGATGTTGGTGGTTGTAAGGAACAGATTGAAAAGATGCGTGAAGTTGTTGAACTTCCCATGCTTCATCCAGAGAAATTTGTCAAGCTTGGAATTGATCCTCCAAAGGGTGTGCTTTGTTATGGTCCACCAGGAACTGGCAAAACACTTTTGGCCAGGGCTGTTGCTAATAGAACTGATGCTTGTTTTATAAGGGTCATTGGAAGTGAACTTGTTCAGAAATATGTTGGTGAGGGGGCTCGGATGGTTCGTGAACTGTTTCAGATGGCCCGTTCAAAAAAGGCGTGCATTGTGTTTTTTGATGAAATTGATGCAATTGGAGGTGCACGATTTGACGATGGTGTTGGTGGTGATAATGAGGTTCAGCGAACTATGCTTGAAATTGTGAATCAGCTTGATGGGTTTGATGCTCGAGGAAACATCAAAGTTTTGATGGCAACGAACAGGCCTGACACTTTGGATCCAGCACTATTGCGGCCTGGGCGATTGGATCGTAAAGTTGAATTTGGCCTGCCTGATCTAGAGAGTAGGACACAAATATTCAAGATACACACGAGAACCATGAACTGTGAAAGGGATATCCGTTTTGAGCTTCTTGCTCGGCTTTGCCCAAACTCCACTGGAGCTGATATAAGGAGTGTGTGCACTGAAGCTGGTATGTATGCTATCCGTGCCCGAAGGAAGACTGTAACAGAGAAAGACTTCCTTGATGCAGTGAATAAAGTCATCAAAGGGTACCAGAAGTTCAGTGCAACTCCCAAATATATGGTCTACAATTGA
Protein sequence

>MsG0180005236.01.T01

MSNEHEDDLKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKEIKDMAKKVNDLCGIKESDTGLATPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEIDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN*